Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972370 | XP_013450855.1 | 98.837 | 602 | 7 | 0 | 155 | 756 | 42 | 643 | 0.0 | 1240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972370 | sp|Q5GQ66|PIOX_PEA | 88.538 | 602 | 69 | 0 | 155 | 756 | 42 | 643 | 0.0 | 1138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972370 | A0A072U5G6 | 98.837 | 602 | 7 | 0 | 155 | 756 | 42 | 643 | 0.0 | 1240 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0972370 | 0.802716 | 4.916109e-49 | -8.615850e-47 |
| Msa0014590 | Msa0972370 | 0.800711 | 1.267796e-48 | -8.615850e-47 |
| Msa0025700 | Msa0972370 | 0.810640 | 1.042376e-50 | -8.615850e-47 |
| Msa0048950 | Msa0972370 | 0.808657 | 2.781143e-50 | -8.615850e-47 |
| Msa0059880 | Msa0972370 | 0.821450 | 4.012314e-53 | -8.615850e-47 |
| Msa0072030 | Msa0972370 | 0.803296 | 3.730962e-49 | -8.615850e-47 |
| Msa0072940 | Msa0972370 | 0.805534 | 1.274261e-49 | -8.615850e-47 |
| Msa0073280 | Msa0972370 | 0.812116 | 4.984259e-51 | -8.615850e-47 |
| Msa0109270 | Msa0972370 | 0.808143 | 3.579234e-50 | -8.615850e-47 |
| Msa0120050 | Msa0972370 | 0.806727 | 7.149471e-50 | -8.615850e-47 |
| Msa0614960 | Msa0972370 | 0.805362 | 1.384805e-49 | -8.615850e-47 |
| Msa0616010 | Msa0972370 | 0.816332 | 5.839481e-52 | -8.615850e-47 |
| Msa0616300 | Msa0972370 | 0.802494 | 5.462401e-49 | -8.615850e-47 |
| Msa0628140 | Msa0972370 | 0.808002 | 3.835398e-50 | -8.615850e-47 |
| Msa0643190 | Msa0972370 | 0.801440 | 8.994086e-49 | -8.615850e-47 |
| Msa0643840 | Msa0972370 | 0.817814 | 2.712752e-52 | -8.615850e-47 |
| Msa0645060 | Msa0972370 | 0.828511 | 8.633304e-55 | -8.615850e-47 |
| Msa0655430 | Msa0972370 | 0.846335 | 2.316944e-59 | -8.615850e-47 |
| Msa0665830 | Msa0972370 | 0.807708 | 4.430028e-50 | -8.615850e-47 |
| Msa0667600 | Msa0972370 | 0.809119 | 2.214661e-50 | -8.615850e-47 |
| Msa0670360 | Msa0972370 | 0.814290 | 1.661147e-51 | -8.615850e-47 |
| Msa0678620 | Msa0972370 | 0.810040 | 1.404452e-50 | -8.615850e-47 |
| Msa0684560 | Msa0972370 | 0.809705 | 1.658366e-50 | -8.615850e-47 |
| Msa0699230 | Msa0972370 | 0.802725 | 4.896512e-49 | -8.615850e-47 |
| Msa0727480 | Msa0972370 | 0.830069 | 3.615000e-55 | -8.615850e-47 |
| Msa0735280 | Msa0972370 | 0.806927 | 6.484545e-50 | -8.615850e-47 |
| Msa0753500 | Msa0972370 | 0.834315 | 3.218099e-56 | -8.615850e-47 |
| Msa0754750 | Msa0972370 | 0.819764 | 9.786564e-53 | -8.615850e-47 |
| Msa0761420 | Msa0972370 | 0.801858 | 7.382964e-49 | -8.615850e-47 |
| Msa0768670 | Msa0972370 | 0.828289 | 9.767630e-55 | -8.615850e-47 |
| Msa0768720 | Msa0972370 | 0.837241 | 5.838354e-57 | -8.615850e-47 |
| Msa0777250 | Msa0972370 | 0.815548 | 8.739958e-52 | -8.615850e-47 |
| Msa0795210 | Msa0972370 | 0.832705 | 8.115438e-56 | -8.615850e-47 |
| Msa0814230 | Msa0972370 | 0.804340 | 2.263769e-49 | -8.615850e-47 |
| Msa0832750 | Msa0972370 | 0.831118 | 2.000638e-55 | -8.615850e-47 |
| Msa0840080 | Msa0972370 | 0.823765 | 1.161552e-53 | -8.615850e-47 |
| Msa0143320 | Msa0972370 | 0.829095 | 6.235457e-55 | -8.615850e-47 |
| Msa0150910 | Msa0972370 | 0.820673 | 6.057767e-53 | -8.615850e-47 |
| Msa0163340 | Msa0972370 | 0.808839 | 2.543168e-50 | -8.615850e-47 |
| Msa0190670 | Msa0972370 | 0.821710 | 3.492874e-53 | -8.615850e-47 |
| Msa0212550 | Msa0972370 | 0.801764 | 7.719118e-49 | -8.615850e-47 |
| Msa0216760 | Msa0972370 | 0.800003 | 1.766976e-48 | -8.615850e-47 |
| Msa0220090 | Msa0972370 | 0.827738 | 1.325239e-54 | -8.615850e-47 |
| Msa0223880 | Msa0972370 | 0.823831 | 1.120946e-53 | -8.615850e-47 |
| Msa0233210 | Msa0972370 | 0.800322 | 1.521697e-48 | -8.615850e-47 |
| Msa0374130 | Msa0972370 | 0.804496 | 2.100422e-49 | -8.615850e-47 |
| Msa0374650 | Msa0972370 | 0.804495 | 2.102146e-49 | -8.615850e-47 |
| Msa0409500 | Msa0972370 | 0.809178 | 2.151615e-50 | -8.615850e-47 |
| Msa0414480 | Msa0972370 | 0.803685 | 3.098358e-49 | -8.615850e-47 |
| Msa0430320 | Msa0972370 | 0.804663 | 1.939341e-49 | -8.615850e-47 |
| Msa0469550 | Msa0972370 | 0.802428 | 5.636815e-49 | -8.615850e-47 |
| Msa0251120 | Msa0972370 | 0.828972 | 6.676591e-55 | -8.615850e-47 |
| Msa0261400 | Msa0972370 | 0.827732 | 1.329550e-54 | -8.615850e-47 |
| Msa0265060 | Msa0972370 | 0.822245 | 2.626470e-53 | -8.615850e-47 |
| Msa0269720 | Msa0972370 | 0.835495 | 1.623109e-56 | -8.615850e-47 |
| Msa0278950 | Msa0972370 | 0.800245 | 1.578004e-48 | -8.615850e-47 |
| Msa0280980 | Msa0972370 | 0.807864 | 4.104809e-50 | -8.615850e-47 |
| Msa0319830 | Msa0972370 | 0.813463 | 2.526882e-51 | -8.615850e-47 |
| Msa0328090 | Msa0972370 | 0.810215 | 1.287395e-50 | -8.615850e-47 |
| Msa0340650 | Msa0972370 | 0.815628 | 8.388784e-52 | -8.615850e-47 |
| Msa0348370 | Msa0972370 | 0.813350 | 2.675670e-51 | -8.615850e-47 |
| Msa0349910 | Msa0972370 | 0.808322 | 3.279231e-50 | -8.615850e-47 |
| Msa0484410 | Msa0972370 | 0.832525 | 8.995818e-56 | -8.615850e-47 |
| Msa0491770 | Msa0972370 | 0.814164 | 1.771310e-51 | -8.615850e-47 |
| Msa0496060 | Msa0972370 | 0.801196 | 1.009106e-48 | -8.615850e-47 |
| Msa0515150 | Msa0972370 | 0.803038 | 4.217693e-49 | -8.615850e-47 |
| Msa0515260 | Msa0972370 | 0.807178 | 5.739477e-50 | -8.615850e-47 |
| Msa0530990 | Msa0972370 | 0.801295 | 9.632249e-49 | -8.615850e-47 |
| Msa0535570 | Msa0972370 | 0.805515 | 1.286271e-49 | -8.615850e-47 |
| Msa0543740 | Msa0972370 | 0.808716 | 2.701902e-50 | -8.615850e-47 |
| Msa0548970 | Msa0972370 | 0.801763 | 7.722128e-49 | -8.615850e-47 |
| Msa0557230 | Msa0972370 | 0.833212 | 6.069996e-56 | -8.615850e-47 |
| Msa0562050 | Msa0972370 | 0.819169 | 1.337675e-52 | -8.615850e-47 |
| Msa0587870 | Msa0972370 | 0.807081 | 6.017338e-50 | -8.615850e-47 |
| Msa0602050 | Msa0972370 | 0.831698 | 1.440763e-55 | -8.615850e-47 |
| Msa0854840 | Msa0972370 | 0.804873 | 1.752958e-49 | -8.615850e-47 |
| Msa0864160 | Msa0972370 | 0.806029 | 1.002970e-49 | -8.615850e-47 |
| Msa0869660 | Msa0972370 | 0.926024 | 8.269454e-91 | -8.615850e-47 |
| Msa0883640 | Msa0972370 | 0.829801 | 4.199982e-55 | -8.615850e-47 |
| Msa0893840 | Msa0972370 | 0.805788 | 1.127043e-49 | -8.615850e-47 |
| Msa0902340 | Msa0972370 | 0.800404 | 1.464328e-48 | -8.615850e-47 |
| Msa0903020 | Msa0972370 | 0.812532 | 4.042716e-51 | -8.615850e-47 |
| Msa0910830 | Msa0972370 | 0.833782 | 4.376226e-56 | -8.615850e-47 |
| Msa0913550 | Msa0972370 | 0.839740 | 1.322130e-57 | -8.615850e-47 |
| Msa0918150 | Msa0972370 | 0.814695 | 1.351527e-51 | -8.615850e-47 |
| Msa0935440 | Msa0972370 | 0.917095 | 8.052094e-86 | -8.615850e-47 |
| Msa0944470 | Msa0972370 | 0.810834 | 9.463558e-51 | -8.615850e-47 |
| Msa0951150 | Msa0972370 | 0.812178 | 4.830761e-51 | -8.615850e-47 |
| Msa0960090 | Msa0972370 | 0.831363 | 1.741997e-55 | -8.615850e-47 |
| Msa0967820 | Msa0972370 | 0.809861 | 1.534497e-50 | -8.615850e-47 |
| Msa0972370 | Msa0982560 | 0.830988 | 2.153687e-55 | -8.615850e-47 |
| Msa0972370 | Msa0982900 | 0.805359 | 1.386852e-49 | -8.615850e-47 |
| Msa0972370 | Msa0985700 | 0.829627 | 4.630900e-55 | -8.615850e-47 |
| Msa0972370 | Msa0987640 | 0.821845 | 3.251301e-53 | -8.615850e-47 |
| Msa0972370 | Msa0990490 | 0.818749 | 1.665868e-52 | -8.615850e-47 |
| Msa0972370 | Msa0997840 | 0.818198 | 2.221729e-52 | -8.615850e-47 |
| Msa0972370 | Msa1006170 | 0.800890 | 1.165386e-48 | -8.615850e-47 |
| Msa0972370 | Msa1006220 | 0.812025 | 5.216173e-51 | -8.615850e-47 |
| Msa0972370 | Msa1021620 | 0.818866 | 1.567515e-52 | -8.615850e-47 |
| Msa0972370 | Msa1022490 | 0.803286 | 3.748483e-49 | -8.615850e-47 |
| Msa0972370 | Msa1022510 | 0.811155 | 8.065432e-51 | -8.615850e-47 |
| Msa0972370 | Msa1024350 | 0.818579 | 1.821340e-52 | -8.615850e-47 |
| Msa0972370 | Msa1026050 | 0.804323 | 2.282159e-49 | -8.615850e-47 |
| Msa0972370 | Msa1037350 | 0.831795 | 1.362824e-55 | -8.615850e-47 |
| Msa0972370 | Msa1042340 | 0.828840 | 7.186869e-55 | -8.615850e-47 |
| Msa0972370 | Msa1055450 | 0.807336 | 5.312793e-50 | -8.615850e-47 |
| Msa0972370 | Msa1061670 | 0.821802 | 3.326852e-53 | -8.615850e-47 |
| Msa0972370 | Msa1063210 | 0.800944 | 1.136229e-48 | -8.615850e-47 |
| Msa0972370 | Msa1076830 | 0.801831 | 7.478458e-49 | -8.615850e-47 |
| Msa0972370 | Msa1087380 | 0.804299 | 2.309299e-49 | -8.615850e-47 |
| Msa0972370 | Msa1106680 | 0.829456 | 5.095021e-55 | -8.615850e-47 |
| Msa0972370 | Msa1106960 | 0.822190 | 2.704741e-53 | -8.615850e-47 |
| Msa0972370 | Msa1109880 | 0.827220 | 1.764537e-54 | -8.615850e-47 |
| Msa0972370 | Msa1109890 | 0.822024 | 2.955532e-53 | -8.615850e-47 |
| Msa0972370 | Msa1123010 | 0.830905 | 2.256321e-55 | -8.615850e-47 |
| Msa0972370 | Msa1125190 | 0.830562 | 2.739275e-55 | -8.615850e-47 |
| Msa0972370 | Msa1147030 | 0.803729 | 3.033768e-49 | -8.615850e-47 |
| Msa0972370 | Msa1149020 | 0.801421 | 9.075161e-49 | -8.615850e-47 |
| Msa0972370 | Msa1164240 | 0.837947 | 3.847708e-57 | -8.615850e-47 |
| Msa0972370 | Msa1170340 | 0.802848 | 4.617117e-49 | -8.615850e-47 |
| Msa0972370 | Msa1179340 | 0.800767 | 1.235113e-48 | -8.615850e-47 |
| Msa0972370 | Msa1216600 | 0.806157 | 9.425424e-50 | -8.615850e-47 |
| Msa0972370 | Msa1225850 | 0.801295 | 9.632771e-49 | -8.615850e-47 |
| Msa0972370 | Msa1240710 | 0.804396 | 2.203776e-49 | -8.615850e-47 |
| Msa0972370 | Msa1269050 | 0.808964 | 2.391003e-50 | -8.615850e-47 |
| Msa0972370 | Msa1275220 | 0.826306 | 2.915746e-54 | -8.615850e-47 |
| Msa0972370 | Msa1279750 | 0.802401 | 5.710785e-49 | -8.615850e-47 |
| Msa0972370 | Msa1296870 | 0.819168 | 1.338299e-52 | -8.615850e-47 |
| Msa0972370 | Msa1300610 | 0.834739 | 2.517682e-56 | -8.615850e-47 |
| Msa0972370 | Msa1313720 | 0.809923 | 1.488579e-50 | -8.615850e-47 |
| Msa0972370 | Msa1319290 | 0.817035 | 4.063614e-52 | -8.615850e-47 |
| Msa0972370 | Msa1323030 | 0.819753 | 9.842079e-53 | -8.615850e-47 |
| Msa0972370 | Msa1323120 | 0.819276 | 1.264669e-52 | -8.615850e-47 |
| Msa0972370 | Msa1329740 | 0.814153 | 1.781050e-51 | -8.615850e-47 |
| Msa0972370 | Msa1357490 | 0.814412 | 1.561075e-51 | -8.615850e-47 |
| Msa0972370 | Msa1357860 | 0.829229 | 5.784964e-55 | -8.615850e-47 |
| Msa0972370 | Msa1377520 | 0.809132 | 2.201091e-50 | -8.615850e-47 |
| Msa0972370 | Msa1407670 | 0.816656 | 4.941462e-52 | -8.615850e-47 |
| Msa0972370 | Msa1411550 | 0.805579 | 1.247077e-49 | -8.615850e-47 |
| Msa0972370 | Msa1445900 | 0.825046 | 5.804347e-54 | -8.615850e-47 |
| Msa0972370 | Msa1449770 | 0.815106 | 1.095449e-51 | -8.615850e-47 |
| Msa0972370 | Msa1459610 | 0.849596 | 2.920960e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972370 | MtrunA17_Chr6g0451281 | 98.671 | 602 | 7 | 1 | 155 | 756 | 42 | 642 | 0.0 | 1234 |
| Msa0972370 | MtrunA17_Chr6g0451291 | 82.947 | 604 | 103 | 0 | 153 | 756 | 12 | 615 | 0.0 | 1072 |
| Msa0972370 | MtrunA17_Chr6g0451261 | 81.157 | 605 | 111 | 2 | 155 | 756 | 310 | 914 | 0.0 | 1040 |
| Msa0972370 | MtrunA17_Chr8g0392711 | 60.963 | 602 | 220 | 3 | 155 | 753 | 32 | 621 | 0.0 | 754 |
| Msa0972370 | MtrunA17_Chr8g0384791 | 30.542 | 203 | 97 | 3 | 3 | 161 | 149 | 351 | 7.63e-22 | 99.0 |
| Msa0972370 | MtrunA17_Chr4g0035331 | 37.647 | 85 | 53 | 0 | 3 | 87 | 22 | 106 | 3.88e-15 | 72.8 |
| Msa0972370 | MtrunA17_Chr3g0087691 | 26.000 | 200 | 98 | 5 | 3 | 156 | 284 | 479 | 1.17e-12 | 71.2 |
| Msa0972370 | MtrunA17_Chr4g0051781 | 47.887 | 71 | 21 | 1 | 1 | 71 | 79 | 133 | 2.71e-12 | 64.7 |
| Msa0972370 | MtrunA17_Chr4g0051771 | 60.870 | 46 | 18 | 0 | 113 | 158 | 4 | 49 | 3.51e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972370 | AT3G01420.1 | 73.798 | 603 | 157 | 1 | 155 | 756 | 37 | 639 | 0.0 | 947 |
| Msa0972370 | AT1G73680.1 | 62.833 | 600 | 219 | 3 | 155 | 753 | 32 | 628 | 0.0 | 792 |
| Msa0972370 | AT1G73680.2 | 61.576 | 609 | 221 | 5 | 155 | 753 | 32 | 637 | 0.0 | 777 |
| Msa0972370 | AT1G73680.3 | 63.514 | 518 | 188 | 1 | 236 | 753 | 3 | 519 | 0.0 | 697 |
| Msa0972370 | AT1G73680.4 | 64.000 | 475 | 170 | 1 | 279 | 753 | 1 | 474 | 0.0 | 647 |
Find 193 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATCAATCACATCCTTTA+AGG | 0.154305 | 6_4:-4647762 | None:intergenic |
| TCACGATGATGTGGAGTATT+TGG | 0.155887 | 6_4:+4640222 | Msa0972370:CDS |
| TTGCCATACTCTTTGATTAA+TGG | 0.175379 | 6_4:-4646452 | None:intergenic |
| TTTGGCGTGATGTTAATTTA+TGG | 0.177488 | 6_4:+4640102 | Msa0972370:CDS |
| CTTCAAGTGCTTTCTCTGTT+TGG | 0.185040 | 6_4:+4647819 | Msa0972370:CDS |
| TCATGATACCTATCTCTAAA+TGG | 0.192004 | 6_4:+4647090 | Msa0972370:CDS |
| CACTTATGTCTACCTCTTCT+TGG | 0.192204 | 6_4:-4640424 | None:intergenic |
| TCCGCTCAATATGGAATTTC+CGG | 0.204038 | 6_4:-4646282 | None:intergenic |
| CATTGATGAGATTGTATTCT+TGG | 0.207586 | 6_4:-4643092 | None:intergenic |
| GTCCTAGTGCTATGCAAATT+TGG | 0.263400 | 6_4:+4640084 | None:intergenic |
| CATTGGTTTGCAACTTCTCT+TGG | 0.267525 | 6_4:-4645155 | None:intergenic |
| AAGAAATTCAAGGACACATT+TGG | 0.271505 | 6_4:+4646254 | Msa0972370:CDS |
| TTCAAGTGCTTTCTCTGTTT+GGG | 0.278891 | 6_4:+4647820 | Msa0972370:CDS |
| CTAGGAACACGCAAGTAAAT+TGG | 0.282392 | 6_4:-4647872 | None:intergenic |
| CATTGTGTTCTAGAACAAAA+AGG | 0.289303 | 6_4:-4645602 | None:intergenic |
| TGGAAGCAATCAAGAAGTTT+TGG | 0.297614 | 6_4:+4645449 | Msa0972370:CDS |
| GAAGATGGAACAGCAATTTC+AGG | 0.297628 | 6_4:+4645537 | Msa0972370:CDS |
| CTTGTGGGGCCCTAGAACTT+TGG | 0.301876 | 6_4:+4646787 | Msa0972370:CDS |
| ATATAAATGGTGCAGTTTAT+AGG | 0.314355 | 6_4:+4647018 | Msa0972370:intron |
| GAACACAACTGAAACCTTAA+AGG | 0.315532 | 6_4:+4647748 | Msa0972370:CDS |
| CCATTGACAAGTTGGGAATA+TGG | 0.315604 | 6_4:+4643013 | Msa0972370:CDS |
| AATTCCTCAGTTAAAGAGTA+TGG | 0.325416 | 6_4:-4646341 | None:intergenic |
| TATAAATGGTGCAGTTTATA+GGG | 0.329414 | 6_4:+4647019 | Msa0972370:intron |
| GGAAGCCAAGGATCTTTCTT+TGG | 0.332821 | 6_4:+4643210 | Msa0972370:CDS |
| GAGGAGCTTGATGTGCTTGT+AGG | 0.336400 | 6_4:+4647176 | Msa0972370:CDS |
| TTGGCGTGATGTTAATTTAT+GGG | 0.337737 | 6_4:+4640103 | Msa0972370:CDS |
| GGAATAGGGTTGTGTTTGTT+TGG | 0.345383 | 6_4:-4647851 | None:intergenic |
| AAATCTTCCCATTTAGAGAT+AGG | 0.346188 | 6_4:-4647098 | None:intergenic |
| TAGCAAGATATAACCAATTC+AGG | 0.346766 | 6_4:+4647057 | Msa0972370:CDS |
| GCCCACAAATCCGCTCAATA+TGG | 0.356073 | 6_4:-4646291 | None:intergenic |
| GGCTAATATACTTGGCCATT+AGG | 0.361626 | 6_4:+4643058 | Msa0972370:CDS |
| ATTAATGGTGGAGATTTGTT+AGG | 0.367829 | 6_4:-4646437 | None:intergenic |
| ACATAAGGAATTTGAAACTT+TGG | 0.369558 | 6_4:+4640246 | Msa0972370:CDS |
| CAGGTGACATTCGTAATAGT+TGG | 0.372460 | 6_4:+4645556 | Msa0972370:CDS |
| ATGGATAGTTCCAAAGTTCT+AGG | 0.375628 | 6_4:-4646797 | None:intergenic |
| TACAACCTTCGTAGAGTCTA+AGG | 0.377575 | 6_4:-4640647 | None:intergenic |
| ACACGCAAGTAAATTGGAAT+AGG | 0.378099 | 6_4:-4647866 | None:intergenic |
| AGGGATGGAAGTGTGATATA+TGG | 0.378363 | 6_4:+4645429 | Msa0972370:intron |
| GTGGCCACCACCATTGGGTC+TGG | 0.383776 | 6_4:-4644150 | None:intergenic |
| TTTATGGGATTCAATTGATA+AGG | 0.387667 | 6_4:+4640118 | Msa0972370:CDS |
| TCTAGAGAGGAGAACATATA+AGG | 0.388770 | 6_4:+4644179 | Msa0972370:CDS |
| TTGTTGCAACAGAGCATAAA+TGG | 0.396461 | 6_4:-4640171 | None:intergenic |
| ATTCCTATGAACGATTTGAT+TGG | 0.399243 | 6_4:+4646696 | Msa0972370:CDS |
| TCTTCCTTCTCATGGCATCT+AGG | 0.400584 | 6_4:+4647255 | Msa0972370:CDS |
| AGAAATTCAAGGACACATTT+GGG | 0.403597 | 6_4:+4646255 | Msa0972370:CDS |
| AATCAACATTGTTAAATTGA+AGG | 0.403687 | 6_4:-4640621 | None:intergenic |
| TCTCTCAAATGCAGGAAATC+AGG | 0.404427 | 6_4:-4646395 | None:intergenic |
| TTGGAGGCATGCGCGCCAAT+TGG | 0.404437 | 6_4:+4646015 | Msa0972370:CDS |
| TGTACGGATGTTTGCATGTC+CGG | 0.406257 | 6_4:-4645243 | None:intergenic |
| ACCTCTTTCTTCTGATCCAC+AGG | 0.406789 | 6_4:-4643246 | None:intergenic |
| AAGAACTTGAAAGATTTAAG+TGG | 0.407097 | 6_4:-4645179 | None:intergenic |
| TGAATAGTCCTCTCCTGAAT+TGG | 0.412126 | 6_4:-4647070 | None:intergenic |
| AAGCTCCACAGTCCAATCTA+TGG | 0.412136 | 6_4:-4645973 | None:intergenic |
| TATATTAGCCCTAAGAAAAC+AGG | 0.412840 | 6_4:-4643045 | None:intergenic |
| ACACTGAAAAGGGTTTGAAA+TGG | 0.417583 | 6_4:+4647723 | Msa0972370:CDS |
| AAGATCTAACCATGTGGACT+TGG | 0.421967 | 6_4:+4646863 | Msa0972370:CDS |
| TTGAACTCCTATCTCTATCA+AGG | 0.422739 | 6_4:-4646736 | None:intergenic |
| TTTCTTAGGGCTAATATACT+TGG | 0.423557 | 6_4:+4643050 | Msa0972370:CDS |
| TCCATATTGAGCGGATTTGT+GGG | 0.423619 | 6_4:+4646290 | Msa0972370:CDS |
| CATGGCAGAGAAGAAGATAA+AGG | 0.425013 | 6_4:+4647202 | Msa0972370:CDS |
| GGATGTTTGCATGTCCGGTC+TGG | 0.429303 | 6_4:-4645238 | None:intergenic |
| TCTGTGCCATCTTCATTATG+TGG | 0.429684 | 6_4:-4646840 | None:intergenic |
| AAGGACACATTTGGGCATTC+CGG | 0.430582 | 6_4:+4646263 | Msa0972370:CDS |
| TGAGGAGACATACACTGAAA+AGG | 0.432708 | 6_4:+4647712 | Msa0972370:CDS |
| TTCCATATTGAGCGGATTTG+TGG | 0.433190 | 6_4:+4646289 | Msa0972370:CDS |
| TTAATGTGATTGCAGCATCT+TGG | 0.433235 | 6_4:+4644217 | Msa0972370:CDS |
| GGAAGATTTAACAGATGATA+AGG | 0.434509 | 6_4:+4647112 | Msa0972370:CDS |
| CATGATACCTATCTCTAAAT+GGG | 0.437524 | 6_4:+4647091 | Msa0972370:CDS |
| CACTGAAAAGGGTTTGAAAT+GGG | 0.443308 | 6_4:+4647724 | Msa0972370:CDS |
| ACACGATTGGATAGATCATA+TGG | 0.443336 | 6_4:+4644254 | Msa0972370:CDS |
| CCCGATCACGTCTCCTTGAA+AGG | 0.443336 | 6_4:-4648192 | None:intergenic |
| AGGTGACATTCGTAATAGTT+GGG | 0.444834 | 6_4:+4645557 | Msa0972370:CDS |
| AGATCTTCATCTTCCAAGTC+CGG | 0.445170 | 6_4:-4645900 | None:intergenic |
| CAAAGATTCACACCATAGAT+TGG | 0.446671 | 6_4:+4645961 | Msa0972370:CDS |
| CTTAAAACTGACACTTTGCT+TGG | 0.447490 | 6_4:+4645996 | Msa0972370:CDS |
| TTTGTTAAAACATCCTTTCA+AGG | 0.448438 | 6_4:+4648179 | Msa0972370:three_prime_UTR |
| AAAGTATTGGAAGAGATCTA+TGG | 0.453437 | 6_4:+4647143 | Msa0972370:CDS |
| AGGTTAACACACCTTCTTGA+TGG | 0.453792 | 6_4:+4640305 | Msa0972370:CDS |
| CTAACTTCAATTGATTAACT+AGG | 0.455907 | 6_4:-4647890 | None:intergenic |
| TTTACATACGACATTGGAAC+GGG | 0.458677 | 6_4:+4640591 | Msa0972370:CDS |
| AGTCCAATCAAATCGTTCAT+AGG | 0.463410 | 6_4:-4646699 | None:intergenic |
| ACTCACAAAATACCATTCAT+TGG | 0.467417 | 6_4:+4640395 | Msa0972370:CDS |
| CTTCCATCAGCAGTTCTGTA+TGG | 0.468141 | 6_4:-4643159 | None:intergenic |
| GAGAAGACCTTGATAGAGAT+AGG | 0.468557 | 6_4:+4646729 | Msa0972370:CDS |
| TGTGGAGTATTTGGAACATA+AGG | 0.472698 | 6_4:+4640231 | Msa0972370:CDS |
| GAACAACACCTGTAGGGGTT+AGG | 0.472979 | 6_4:+4643118 | Msa0972370:CDS |
| GGTGGAGATTTGTTAGGCCC+AGG | 0.474083 | 6_4:-4646431 | None:intergenic |
| TTAGAAGGAATACCCGGACT+TGG | 0.474562 | 6_4:+4645887 | Msa0972370:intron |
| TTCTGCCAAAGAAAGATCCT+TGG | 0.475376 | 6_4:-4643215 | None:intergenic |
| TAAGGAAGTAATCAAAGTAT+TGG | 0.476469 | 6_4:+4647130 | Msa0972370:CDS |
| TGTACACTCCATTGACAAGT+TGG | 0.477814 | 6_4:+4643005 | Msa0972370:CDS |
| CAATGGGTCACCAAGCTTGT+GGG | 0.479439 | 6_4:+4646772 | Msa0972370:CDS |
| GTTTATGTGTATATATGTAT+TGG | 0.479776 | 6_4:+4647956 | Msa0972370:three_prime_UTR |
| AAAACTGACACTTTGCTTGG+AGG | 0.483364 | 6_4:+4645999 | Msa0972370:CDS |
| TGAAAGATTTAAGTGGGCAT+TGG | 0.483896 | 6_4:-4645172 | None:intergenic |
| GAGGAGACATACACTGAAAA+GGG | 0.487965 | 6_4:+4647713 | Msa0972370:CDS |
| CCATATTCCCAACTTGTCAA+TGG | 0.488054 | 6_4:-4643013 | None:intergenic |
| GTTTATAGGGATAGAGAGAG+AGG | 0.488250 | 6_4:+4647032 | Msa0972370:intron |
| CATCTTCATTATGTGGTACT+AGG | 0.488307 | 6_4:-4646833 | None:intergenic |
| GAACTTCTTCATAATGAAGA+TGG | 0.489125 | 6_4:+4645522 | Msa0972370:CDS |
| TTCAATTCATGATACACGAT+TGG | 0.494349 | 6_4:+4644241 | Msa0972370:CDS |
| ATGGCAGAGAAGAAGATAAA+GGG | 0.494420 | 6_4:+4647203 | Msa0972370:CDS |
| AAGACAAAGGAAATCCCAAC+TGG | 0.494544 | 6_4:+4645203 | Msa0972370:CDS |
| ATAGGGTTGTGTTTGTTTGG+TGG | 0.495064 | 6_4:-4647848 | None:intergenic |
| TCAATGGGTCACCAAGCTTG+TGG | 0.496325 | 6_4:+4646771 | Msa0972370:CDS |
| TCTTTATCGCTATGCTAGAC+TGG | 0.496710 | 6_4:+4645920 | Msa0972370:CDS |
| CCATACTCTTTGATTAATGG+TGG | 0.497692 | 6_4:-4646449 | None:intergenic |
| AATGAAAATGCTGGAAGCCA+AGG | 0.497779 | 6_4:+4643198 | Msa0972370:CDS |
| CACGCAAGTAAATTGGAATA+GGG | 0.499528 | 6_4:-4647865 | None:intergenic |
| GACATTCGTAATAGTTGGGC+TGG | 0.499613 | 6_4:+4645561 | Msa0972370:CDS |
| GTACACTCCATTGACAAGTT+GGG | 0.500923 | 6_4:+4643006 | Msa0972370:CDS |
| AATTGCTTGCGAAGACTGCT+TGG | 0.501171 | 6_4:+4640527 | Msa0972370:intron |
| CCTTTCAAGGAGACGTGATC+GGG | 0.504575 | 6_4:+4648192 | Msa0972370:three_prime_UTR |
| TAACACACCTTCTTGATGGT+TGG | 0.508319 | 6_4:+4640309 | Msa0972370:CDS |
| GAATACAATCTCATCAATGT+TGG | 0.513749 | 6_4:+4643096 | Msa0972370:CDS |
| GTTCTAGGGCCCCACAAGCT+TGG | 0.514270 | 6_4:-4646782 | None:intergenic |
| GTTCTGTATGGAAAATCAGT+AGG | 0.514586 | 6_4:-4643147 | None:intergenic |
| TTTCCATACAGAACTGCTGA+TGG | 0.525073 | 6_4:+4643156 | Msa0972370:CDS |
| TTTCAAGTTCTTCAAGACAA+AGG | 0.527235 | 6_4:+4645190 | Msa0972370:CDS |
| GATCTTCATCTTCCAAGTCC+GGG | 0.528153 | 6_4:-4645899 | None:intergenic |
| AGAACTTGAAAGATTTAAGT+GGG | 0.531545 | 6_4:-4645178 | None:intergenic |
| TGATGTGCTTGTAGGTCTCA+TGG | 0.533097 | 6_4:+4647184 | Msa0972370:CDS |
| ATTCAATTGATAAGGCTCTC+AGG | 0.533963 | 6_4:+4640126 | Msa0972370:CDS |
| ATGTTGGAACAACACCTGTA+GGG | 0.533992 | 6_4:+4643112 | Msa0972370:CDS |
| CAGATGTGTCTCTCAAATGC+AGG | 0.534010 | 6_4:-4646403 | None:intergenic |
| TGCAGGAAATCAGGCAGGAG+TGG | 0.534116 | 6_4:-4646386 | None:intergenic |
| ATTATTGGGAAAGAAATTCA+AGG | 0.534335 | 6_4:+4646244 | Msa0972370:CDS |
| TCCTTTCAAGGAGACGTGAT+CGG | 0.536346 | 6_4:+4648191 | Msa0972370:three_prime_UTR |
| GAGACACATCTGCCTCCCCT+GGG | 0.536799 | 6_4:+4646414 | Msa0972370:CDS |
| TTGGTGAAGATGTCTCCTAA+TGG | 0.538800 | 6_4:-4643073 | None:intergenic |
| AACGATTTGATTGGACTACA+AGG | 0.541846 | 6_4:+4646705 | Msa0972370:CDS |
| GGGTTTGACCTAACCCCTAC+AGG | 0.542080 | 6_4:-4643126 | None:intergenic |
| TGCTGTTTGTGATTCTCTCA+AGG | 0.545481 | 6_4:+4645623 | Msa0972370:CDS |
| GAAGAATGAAACGAATGCTC+AGG | 0.547841 | 6_4:+4640274 | Msa0972370:CDS |
| ACTAGGTCTCTGAGCCATGA+TGG | 0.548069 | 6_4:-4646816 | None:intergenic |
| CTAGTACCACATAATGAAGA+TGG | 0.550456 | 6_4:+4646834 | Msa0972370:CDS |
| ACACCTTCTTGATGGTTGGA+AGG | 0.556047 | 6_4:+4640313 | Msa0972370:CDS |
| GTGGAGATTTGTTAGGCCCA+GGG | 0.557871 | 6_4:-4646430 | None:intergenic |
| AACTTTGGAACTATCCATCA+TGG | 0.560304 | 6_4:+4646802 | Msa0972370:CDS |
| AATGTTGGAACAACACCTGT+AGG | 0.566767 | 6_4:+4643111 | Msa0972370:CDS |
| TGGACCTCATAGAAACCAGT+TGG | 0.569869 | 6_4:-4645218 | None:intergenic |
| ATTCTTACCACCAAGGTGTA+CGG | 0.577040 | 6_4:-4645259 | None:intergenic |
| GTACTTTACAGGAGGCTAGA+GGG | 0.578298 | 6_4:+4647662 | Msa0972370:intron |
| AATCCCAACTGGTTTCTATG+AGG | 0.581470 | 6_4:+4645214 | Msa0972370:CDS |
| TCAAATGCAGGAAATCAGGC+AGG | 0.582700 | 6_4:-4646391 | None:intergenic |
| ATGAAGAGAGCAGAAAATCA+TGG | 0.584968 | 6_4:+4646314 | Msa0972370:CDS |
| AATGGGTCACCAAGCTTGTG+GGG | 0.585071 | 6_4:+4646773 | Msa0972370:CDS |
| TCCGGAAATTCCATATTGAG+CGG | 0.585092 | 6_4:+4646281 | Msa0972370:CDS |
| CCCTGTGGATCAGAAGAAAG+AGG | 0.587403 | 6_4:+4643245 | Msa0972370:CDS |
| TGGATAGTTCCAAAGTTCTA+GGG | 0.588238 | 6_4:-4646796 | None:intergenic |
| CAAGAGCAGCCAAGTCCACA+TGG | 0.589521 | 6_4:-4646872 | None:intergenic |
| AGGAGAACATATAAGGACAC+AGG | 0.590610 | 6_4:+4644186 | Msa0972370:CDS |
| GGACCTCATAGAAACCAGTT+GGG | 0.590777 | 6_4:-4645217 | None:intergenic |
| CGAATGCTCAGGTCGTTGAA+AGG | 0.592991 | 6_4:+4640285 | Msa0972370:CDS |
| TGGTAAAATCAAAATATCAA+AGG | 0.594234 | 6_4:+4645494 | Msa0972370:CDS |
| TTCTGTATGGAAAATCAGTA+GGG | 0.594749 | 6_4:-4643146 | None:intergenic |
| TTTACCTAGATGCCATGAGA+AGG | 0.594996 | 6_4:-4647259 | None:intergenic |
| TCATATGGAAGACACTCAGC+AGG | 0.595518 | 6_4:+4644269 | Msa0972370:CDS |
| AAAATCAAAATATCAAAGGA+AGG | 0.597631 | 6_4:+4645498 | Msa0972370:CDS |
| AATTGCAACATCACAAAGAG+AGG | 0.598783 | 6_4:-4640554 | None:intergenic |
| GCCCTAAGAAAACAGGCATA+CGG | 0.598987 | 6_4:-4643038 | None:intergenic |
| GGTTTCTATGAGGTCCAGAC+CGG | 0.599406 | 6_4:+4645224 | Msa0972370:CDS |
| CAAACATCCGTACACCTTGG+TGG | 0.599441 | 6_4:+4645252 | Msa0972370:CDS |
| CCTTCTTGATGGTTGGAAGG+AGG | 0.599967 | 6_4:+4640316 | Msa0972370:CDS |
| TAGAAATATTCTTACCACCA+AGG | 0.600051 | 6_4:-4645266 | None:intergenic |
| AAAGTGAGGACTTTCAAAGA+TGG | 0.602146 | 6_4:+4645474 | Msa0972370:CDS |
| AGTTAGTTTACATACGACAT+TGG | 0.606643 | 6_4:+4640585 | Msa0972370:CDS |
| TGTACTTTACAGGAGGCTAG+AGG | 0.608230 | 6_4:+4647661 | Msa0972370:intron |
| ATGCAAACATCCGTACACCT+TGG | 0.610700 | 6_4:+4645249 | Msa0972370:CDS |
| CCTCCTTCCAACCATCAAGA+AGG | 0.610822 | 6_4:-4640316 | None:intergenic |
| CAATCAAATTCTTGCCACTG+CGG | 0.618670 | 6_4:-4640349 | None:intergenic |
| TGGAGATTTGTTAGGCCCAG+GGG | 0.619449 | 6_4:-4646429 | None:intergenic |
| GTTTACATACGACATTGGAA+CGG | 0.621060 | 6_4:+4640590 | Msa0972370:CDS |
| TGTTGGAACAACACCTGTAG+GGG | 0.624930 | 6_4:+4643113 | Msa0972370:CDS |
| GAAACCAGACCCAATGGTGG+TGG | 0.626280 | 6_4:+4644146 | Msa0972370:CDS |
| TGTTCCATACTCTTTAACTG+AGG | 0.627621 | 6_4:+4646337 | Msa0972370:CDS |
| ACTCTATTAGAAGGAATACC+CGG | 0.629221 | 6_4:+4645881 | Msa0972370:intron |
| TGGCAGAAACATTCTCCCTG+TGG | 0.629915 | 6_4:+4643230 | Msa0972370:CDS |
| CCTCTTTCTTCTGATCCACA+GGG | 0.636628 | 6_4:-4643245 | None:intergenic |
| TTTCACAAGCAACTACAATG+AGG | 0.638322 | 6_4:+4647694 | Msa0972370:CDS |
| GATCTATGGTGATGATGTTG+AGG | 0.639862 | 6_4:+4647157 | Msa0972370:CDS |
| GTTGTTGAAACCAGACCCAA+TGG | 0.642194 | 6_4:+4644140 | Msa0972370:intron |
| TTGTGATGTTGCAATTGATG+AGG | 0.649469 | 6_4:+4640561 | Msa0972370:CDS |
| AGATTTGTTAGGCCCAGGGG+AGG | 0.649803 | 6_4:-4646426 | None:intergenic |
| AGATATAACCAATTCAGGAG+AGG | 0.663971 | 6_4:+4647062 | Msa0972370:CDS |
| TGGCCACAAAACTTCTAGAG+AGG | 0.664169 | 6_4:+4644166 | Msa0972370:CDS |
| TAAAACAAATAAAACACTAG+CGG | 0.671684 | 6_4:-4648074 | None:intergenic |
| GGAGAACATATAAGGACACA+GGG | 0.674169 | 6_4:+4644187 | Msa0972370:CDS |
| TCTCAGGAGAAACTATAACA+TGG | 0.686790 | 6_4:+4640142 | Msa0972370:CDS |
| CACAGAAAGATCTAACCATG+TGG | 0.707467 | 6_4:+4646857 | Msa0972370:CDS |
| GAGGCTAAGATTATCCGCAG+TGG | 0.741704 | 6_4:+4640335 | Msa0972370:CDS |
| TCACACCATAGATTGGACTG+TGG | 0.755338 | 6_4:+4645968 | Msa0972370:CDS |
| GTTGAAACCAGACCCAATGG+TGG | 0.761180 | 6_4:+4644143 | Msa0972370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACCAAAAAAATTTAT+TGG | + | chr6_4:4640973-4640992 | Msa0972370:intron | 10.0% |
| !!! | ATCAATATGAATTTTTTTTA+AGG | + | chr6_4:4641254-4641273 | Msa0972370:intron | 10.0% |
| !!! | TTTTTTTTCTTTTATAAGTA+TGG | + | chr6_4:4641336-4641355 | Msa0972370:intron | 10.0% |
| !! | AAATATTGTTAGTATTATAT+TGG | + | chr6_4:4643345-4643364 | Msa0972370:intron | 10.0% |
| !!! | TTTTTGTTTATATTTTTTGA+CGG | - | chr6_4:4643482-4643501 | None:intergenic | 10.0% |
| !! | CAAAAAATATAAACAAAAAT+TGG | + | chr6_4:4643483-4643502 | Msa0972370:intron | 10.0% |
| !!! | TAAACATTAATTTGAATATT+TGG | + | chr6_4:4644326-4644345 | Msa0972370:intron | 10.0% |
| !! | AGAAAATATTAGAAAATTTA+TGG | - | chr6_4:4644916-4644935 | None:intergenic | 10.0% |
| !! | ATATAATAATATAAGGTTAT+TGG | - | chr6_4:4645030-4645049 | None:intergenic | 10.0% |
| !!! | AAATTTTTTTTTTTTTTGGA+AGG | - | chr6_4:4645367-4645386 | None:intergenic | 10.0% |
| !!! | GTTCAAATTTTTTTTTTTTT+TGG | - | chr6_4:4645371-4645390 | None:intergenic | 10.0% |
| !!! | TTACCATTAAAATTTTTATA+AGG | - | chr6_4:4647378-4647397 | None:intergenic | 10.0% |
| !!! | AAAAATTTTAATGGTAATTT+TGG | + | chr6_4:4647381-4647400 | Msa0972370:intron | 10.0% |
| !!! | ATCATTTATCCTTTTTTTTA+AGG | - | chr6_4:4640911-4640930 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTATAAAACTGG+TGG | - | chr6_4:4641018-4641037 | None:intergenic | 15.0% |
| !!! | CAATATGAATTTTTTTCTTT+TGG | + | chr6_4:4641100-4641119 | Msa0972370:intron | 15.0% |
| !! | TAAAATGTCATTAACTAATT+AGG | + | chr6_4:4641180-4641199 | Msa0972370:intron | 15.0% |
| !!! | TAGCATTTTCAATTATTTTT+TGG | - | chr6_4:4641213-4641232 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTTTTTTTGAAAG+AGG | + | chr6_4:4641285-4641304 | Msa0972370:intron | 15.0% |
| !!! | AGTTTTTTTTTTTTGAAAGA+GGG | + | chr6_4:4641286-4641305 | Msa0972370:intron | 15.0% |
| !! | TAACTTATAATAAAATACGA+AGG | + | chr6_4:4641669-4641688 | Msa0972370:intron | 15.0% |
| !! | AACTTATAATAAAATACGAA+GGG | + | chr6_4:4641670-4641689 | Msa0972370:intron | 15.0% |
| !! | CAAATAAACAATTTGATATA+TGG | - | chr6_4:4641962-4641981 | None:intergenic | 15.0% |
| !!! | ATGATTTTTCTTTTATTAGT+AGG | - | chr6_4:4642144-4642163 | None:intergenic | 15.0% |
| !! | TTTGATATAGAAAAACTATA+GGG | - | chr6_4:4642376-4642395 | None:intergenic | 15.0% |
| !!! | TTTGAAATGATAGTTTTAAT+GGG | - | chr6_4:4642466-4642485 | None:intergenic | 15.0% |
| !!! | ATTTGAAATGATAGTTTTAA+TGG | - | chr6_4:4642467-4642486 | None:intergenic | 15.0% |
| !!! | TATTTACTAAAGTATCAAAA+TGG | + | chr6_4:4642835-4642854 | Msa0972370:intron | 15.0% |
| !! | TAGATATAAAGTTTATTTCA+TGG | - | chr6_4:4643424-4643443 | None:intergenic | 15.0% |
| !!! | ACTAGTTTACTTTTTTTTAA+GGG | - | chr6_4:4643448-4643467 | None:intergenic | 15.0% |
| !!! | TACTAGTTTACTTTTTTTTA+AGG | - | chr6_4:4643449-4643468 | None:intergenic | 15.0% |
| !! | GATAATATGTATGAAATTTA+AGG | - | chr6_4:4644708-4644727 | None:intergenic | 15.0% |
| !! | ATCTCAAAAAAGTTATTAAA+TGG | + | chr6_4:4644998-4645017 | Msa0972370:intron | 15.0% |
| !! | TCTCAAAAAAGTTATTAAAT+GGG | + | chr6_4:4644999-4645018 | Msa0972370:intron | 15.0% |
| !! | ATTTAACCCTAAATTATATA+TGG | + | chr6_4:4645306-4645325 | Msa0972370:intron | 15.0% |
| !! | AAATGAAACTATATGATAAT+AGG | + | chr6_4:4645409-4645428 | Msa0972370:intron | 15.0% |
| !! | AATGAAACTATATGATAATA+GGG | + | chr6_4:4645410-4645429 | Msa0972370:intron | 15.0% |
| !!! | AATAAAATCTCTATTTTGTA+TGG | + | chr6_4:4646658-4646677 | Msa0972370:intron | 15.0% |
| !! | ACTTACACATAAAATAAAAA+TGG | - | chr6_4:4646971-4646990 | None:intergenic | 15.0% |
| !! | TTATAATGTGATCATATAAA+TGG | + | chr6_4:4647005-4647024 | Msa0972370:intron | 15.0% |
| !!! | AGTCCTTATAAAAATTTTAA+TGG | + | chr6_4:4647372-4647391 | Msa0972370:intron | 15.0% |
| !! | TACAAAATACAATATTATAG+AGG | - | chr6_4:4647408-4647427 | None:intergenic | 15.0% |
| !!! | CTTTTATATCTAAATGTTTA+GGG | + | chr6_4:4647594-4647613 | Msa0972370:intron | 15.0% |
| !!! | TTCTTTAACTTTTAAAAGAT+TGG | + | chr6_4:4648127-4648146 | Msa0972370:three_prime_UTR | 15.0% |
| !! | AATCAACATTGTTAAATTGA+AGG | - | chr6_4:4640624-4640643 | None:intergenic | 20.0% |
| !! | AAAATGTGTCAAATACATTA+TGG | - | chr6_4:4640862-4640881 | None:intergenic | 20.0% |
| !! | GAATTGTTTCCTTAAAAAAA+AGG | + | chr6_4:4640899-4640918 | Msa0972370:intron | 20.0% |
| !!! | ATTCTGCCAATAAATTTTTT+TGG | - | chr6_4:4640982-4641001 | None:intergenic | 20.0% |
| !! | ATTCGATTTCTGATAATTAT+TGG | - | chr6_4:4641483-4641502 | None:intergenic | 20.0% |
| !!! | ACATGTGACATTATTAATTT+TGG | + | chr6_4:4641548-4641567 | Msa0972370:intron | 20.0% |
| !! | CATATATTTATATACTACCA+CGG | - | chr6_4:4641917-4641936 | None:intergenic | 20.0% |
| !! | GTTTGATATAGAAAAACTAT+AGG | - | chr6_4:4642377-4642396 | None:intergenic | 20.0% |
| !!! | TGAAGAAAAGTATTTATACA+AGG | - | chr6_4:4642564-4642583 | None:intergenic | 20.0% |
| !! | ATGTAATTAGTTAGTATAGT+TGG | - | chr6_4:4642890-4642909 | None:intergenic | 20.0% |
| !!! | CTAGTTTACTTTTTTTTAAG+GGG | - | chr6_4:4643447-4643466 | None:intergenic | 20.0% |
| !!! | ATTTCTCTCTTTGATAATTA+AGG | - | chr6_4:4643875-4643894 | None:intergenic | 20.0% |
| !!! | TTATAGAAGATGTTTTAGTT+AGG | + | chr6_4:4643894-4643913 | Msa0972370:intron | 20.0% |
| !!! | AAACATTAATTTTTGCTACT+TGG | + | chr6_4:4644366-4644385 | Msa0972370:intron | 20.0% |
| !! | TTAAAATTTGTCAAGTATCT+TGG | + | chr6_4:4644626-4644645 | Msa0972370:intron | 20.0% |
| !! | TAAAATTTGTCAAGTATCTT+GGG | + | chr6_4:4644627-4644646 | Msa0972370:intron | 20.0% |
| !! | AAACTTAAGAAAAGTTTCAA+TGG | - | chr6_4:4644732-4644751 | None:intergenic | 20.0% |
| !! | ATAAGTTAATGACATGATAA+TGG | - | chr6_4:4644891-4644910 | None:intergenic | 20.0% |
| !! | TGGTAAAATCAAAATATCAA+AGG | + | chr6_4:4645494-4645513 | Msa0972370:CDS | 20.0% |
| !! | AAAATCAAAATATCAAAGGA+AGG | + | chr6_4:4645498-4645517 | Msa0972370:CDS | 20.0% |
| !!! | ACTAAAAGTTCAATTGTTTT+AGG | + | chr6_4:4646216-4646235 | Msa0972370:intron | 20.0% |
| !!! | TAAGAGAAGAATCATTTTTT+TGG | - | chr6_4:4646596-4646615 | None:intergenic | 20.0% |
| !!! | ATTCTTCTCTTAAAGTATTT+AGG | + | chr6_4:4646604-4646623 | Msa0972370:intron | 20.0% |
| !!! | TGAAATGGTCTTAAAAATAA+AGG | - | chr6_4:4646920-4646939 | None:intergenic | 20.0% |
| !!! | AGACCATTTCATAATTTTTT+AGG | + | chr6_4:4646929-4646948 | Msa0972370:intron | 20.0% |
| !!! | GACCATTTCATAATTTTTTA+GGG | + | chr6_4:4646930-4646949 | Msa0972370:intron | 20.0% |
| !! | AACCCTAAAAAATTATGAAA+TGG | - | chr6_4:4646935-4646954 | None:intergenic | 20.0% |
| !! | AAAACATATTTAACCCTAAA+AGG | - | chr6_4:4645299-4645318 | None:intergenic | 20.0% |
| !!! | ATTTTTATAAGGACTAAACT+TGG | - | chr6_4:4647367-4647386 | None:intergenic | 20.0% |
| !!! | TGTAAAAAGTTTTCAAAACA+TGG | - | chr6_4:4647439-4647458 | None:intergenic | 20.0% |
| !!! | TTGAAAGCTTGTAATTTTAT+AGG | + | chr6_4:4647547-4647566 | Msa0972370:intron | 20.0% |
| !!! | TGAAAGCTTGTAATTTTATA+GGG | + | chr6_4:4647548-4647567 | Msa0972370:intron | 20.0% |
| !! | ACATTTAGATATAAAAGGTA+CGG | - | chr6_4:4647591-4647610 | None:intergenic | 20.0% |
| !! | CCTAAACATTTAGATATAAA+AGG | - | chr6_4:4647596-4647615 | None:intergenic | 20.0% |
| !!! | CCTTTTATATCTAAATGTTT+AGG | + | chr6_4:4647593-4647612 | Msa0972370:intron | 20.0% |
| !! | TGAAATTTAATGTACTTTAC+AGG | + | chr6_4:4647651-4647670 | Msa0972370:intron | 20.0% |
| !! | GTTTATGTGTATATATGTAT+TGG | + | chr6_4:4647956-4647975 | Msa0972370:three_prime_UTR | 20.0% |
| !!! | AACATGATTTTATTCTTGAA+AGG | - | chr6_4:4648031-4648050 | None:intergenic | 20.0% |
| !! | TAAAACAAATAAAACACTAG+CGG | - | chr6_4:4648077-4648096 | None:intergenic | 20.0% |
| ! | TTTATGGGATTCAATTGATA+AGG | + | chr6_4:4640118-4640137 | Msa0972370:CDS | 25.0% |
| ! | TCGTGATAAAAAGTTCTATT+TGG | - | chr6_4:4640208-4640227 | None:intergenic | 25.0% |
| !! | ACATAAGGAATTTGAAACTT+TGG | + | chr6_4:4640246-4640265 | Msa0972370:CDS | 25.0% |
| !!! | ACTCTCATGTTGATTTTAAT+AGG | + | chr6_4:4640758-4640777 | Msa0972370:intron | 25.0% |
| ! | TGGTACATTATCATAAACAT+GGG | - | chr6_4:4640842-4640861 | None:intergenic | 25.0% |
| ! | ATGGTACATTATCATAAACA+TGG | - | chr6_4:4640843-4640862 | None:intergenic | 25.0% |
| ! | GAATATACATAAATTACCAC+AGG | + | chr6_4:4641154-4641173 | Msa0972370:intron | 25.0% |
| ! | AATGTCATTAACTAATTAGG+TGG | + | chr6_4:4641183-4641202 | Msa0972370:intron | 25.0% |
| ! | AGGGATTACATTTAGTTATT+CGG | + | chr6_4:4641305-4641324 | Msa0972370:intron | 25.0% |
| !! | TTTCTTTGACTTAATGTGTT+AGG | - | chr6_4:4641512-4641531 | None:intergenic | 25.0% |
| ! | GTAAGGAAAATGCTAATAAA+TGG | - | chr6_4:4641711-4641730 | None:intergenic | 25.0% |
| ! | ACAATTTGATATATGGATCT+GGG | - | chr6_4:4641955-4641974 | None:intergenic | 25.0% |
| ! | AACAATTTGATATATGGATC+TGG | - | chr6_4:4641956-4641975 | None:intergenic | 25.0% |
| ! | TTAATCAAAATACAACCATG+AGG | - | chr6_4:4642173-4642192 | None:intergenic | 25.0% |
| !!! | AAGTTTATCTCTTTCAAGTT+TGG | - | chr6_4:4642322-4642341 | None:intergenic | 25.0% |
| !! | ATCCTTGATAATTGAGAATA+TGG | + | chr6_4:4642624-4642643 | Msa0972370:intron | 25.0% |
| ! | ATCCATATTCTCAATTATCA+AGG | - | chr6_4:4642629-4642648 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTTTATAGAACC+AGG | + | chr6_4:4642670-4642689 | Msa0972370:intron | 25.0% |
| ! | AAAATTGAAAGTTACACGAT+TGG | + | chr6_4:4643271-4643290 | Msa0972370:intron | 25.0% |
| ! | TGTTAGTATTATATTGGAAG+TGG | + | chr6_4:4643351-4643370 | Msa0972370:intron | 25.0% |
| ! | TTATTTCATGGCTTAAGTTA+GGG | - | chr6_4:4643412-4643431 | None:intergenic | 25.0% |
| ! | TTTATTTCATGGCTTAAGTT+AGG | - | chr6_4:4643413-4643432 | None:intergenic | 25.0% |
| ! | AATTGGTCAACAAAAGTTAA+AGG | + | chr6_4:4643500-4643519 | Msa0972370:intron | 25.0% |
| !!! | ACTCATTTTTGCTTACATTT+TGG | + | chr6_4:4643563-4643582 | Msa0972370:intron | 25.0% |
| !! | ATTTTTGCTTACATTTTGGA+CGG | + | chr6_4:4643567-4643586 | Msa0972370:intron | 25.0% |
| ! | ACATATAAATAGAAGACAAG+CGG | + | chr6_4:4643726-4643745 | Msa0972370:intron | 25.0% |
| !!! | AGAGATGCTACAATTTTTTT+AGG | + | chr6_4:4643778-4643797 | Msa0972370:intron | 25.0% |
| !! | AGGTAATTAATGAACCTTTT+TGG | + | chr6_4:4643914-4643933 | Msa0972370:intron | 25.0% |
| !! | GGTAATTAATGAACCTTTTT+GGG | + | chr6_4:4643915-4643934 | Msa0972370:intron | 25.0% |
| !! | TATACTCATCATAGTGTTTT+TGG | - | chr6_4:4644048-4644067 | None:intergenic | 25.0% |
| !! | GCATAAACACAATATTTTCT+TGG | - | chr6_4:4644119-4644138 | None:intergenic | 25.0% |
| !! | AGAACACGAATTTTATATGA+CGG | - | chr6_4:4644461-4644480 | None:intergenic | 25.0% |
| ! | TATAAAATTCGTGTTCTCAA+CGG | + | chr6_4:4644464-4644483 | Msa0972370:intron | 25.0% |
| ! | ATATGTCACATCACTAAAAA+TGG | + | chr6_4:4644490-4644509 | Msa0972370:intron | 25.0% |
| ! | TAAGGATGTCTGAATATAAT+TGG | - | chr6_4:4644690-4644709 | None:intergenic | 25.0% |
| !!! | TAATGACATGATAATGGATT+TGG | - | chr6_4:4644885-4644904 | None:intergenic | 25.0% |
| ! | AGAACTTGAAAGATTTAAGT+GGG | - | chr6_4:4645181-4645200 | None:intergenic | 25.0% |
| ! | AAGAACTTGAAAGATTTAAG+TGG | - | chr6_4:4645182-4645201 | None:intergenic | 25.0% |
| ! | TTGGGACCATATATAATTTA+GGG | - | chr6_4:4645315-4645334 | None:intergenic | 25.0% |
| ! | ATTGGGACCATATATAATTT+AGG | - | chr6_4:4645316-4645335 | None:intergenic | 25.0% |
| ! | CAATTAAAAGGTCTTACATT+GGG | - | chr6_4:4645333-4645352 | None:intergenic | 25.0% |
| ! | TCAATTAAAAGGTCTTACAT+TGG | - | chr6_4:4645334-4645353 | None:intergenic | 25.0% |
| ! | GATGTGTAAGTTCAATTAAA+AGG | - | chr6_4:4645345-4645364 | None:intergenic | 25.0% |
| ! | AAACTATATGATAATAGGGA+TGG | + | chr6_4:4645414-4645433 | Msa0972370:intron | 25.0% |
| !!! | ATTGTGTTCTAGAACAAAAA+GGG | - | chr6_4:4645604-4645623 | None:intergenic | 25.0% |
| ! | GATAATTGTACTCTATTAGA+AGG | + | chr6_4:4645872-4645891 | Msa0972370:intron | 25.0% |
| ! | TCGTTATACATCTCATATTA+TGG | + | chr6_4:4646065-4646084 | Msa0972370:intron | 25.0% |
| ! | CGTTATACATCTCATATTAT+GGG | + | chr6_4:4646066-4646085 | Msa0972370:intron | 25.0% |
| ! | ATGACTTCAACAAAAACTAT+CGG | - | chr6_4:4646193-4646212 | None:intergenic | 25.0% |
| !!! | AAGTTCAATTGTTTTAGGTA+TGG | + | chr6_4:4646221-4646240 | Msa0972370:intron | 25.0% |
| !!! | TTGTTTTAGGTATGGATTAT+TGG | + | chr6_4:4646229-4646248 | Msa0972370:intron | 25.0% |
| !!! | TGTTTTAGGTATGGATTATT+GGG | + | chr6_4:4646230-4646249 | Msa0972370:intron | 25.0% |
| ! | ATTATTGGGAAAGAAATTCA+AGG | + | chr6_4:4646244-4646263 | Msa0972370:CDS | 25.0% |
| ! | TCAAAAACAATTGGTATCAA+TGG | + | chr6_4:4646755-4646774 | Msa0972370:CDS | 25.0% |
| ! | CAAAAACAATTGGTATCAAT+GGG | + | chr6_4:4646756-4646775 | Msa0972370:CDS | 25.0% |
| ! | ATATAAATGGTGCAGTTTAT+AGG | + | chr6_4:4647018-4647037 | Msa0972370:intron | 25.0% |
| ! | TATAAATGGTGCAGTTTATA+GGG | + | chr6_4:4647019-4647038 | Msa0972370:intron | 25.0% |
| ! | TAAGGAAGTAATCAAAGTAT+TGG | + | chr6_4:4647130-4647149 | Msa0972370:CDS | 25.0% |
| !!! | TTTTTTAATCTTCCTTCTCA+TGG | + | chr6_4:4647247-4647266 | Msa0972370:CDS | 25.0% |
| !! | ATATGATGTCTATACCTTTT+AGG | + | chr6_4:4647303-4647322 | Msa0972370:intron | 25.0% |
| !! | TATGATGTCTATACCTTTTA+GGG | + | chr6_4:4647304-4647323 | Msa0972370:intron | 25.0% |
| !!! | TGGAAACTTGTGATTTTTTA+GGG | - | chr6_4:4647347-4647366 | None:intergenic | 25.0% |
| !!! | TTGGAAACTTGTGATTTTTT+AGG | - | chr6_4:4647348-4647367 | None:intergenic | 25.0% |
| !!! | GTCCTTATTTGCATTTTATA+GGG | - | chr6_4:4647494-4647513 | None:intergenic | 25.0% |
| !!! | AGTCCTTATTTGCATTTTAT+AGG | - | chr6_4:4647495-4647514 | None:intergenic | 25.0% |
| !! | ATATCTAAATGTTTAGGGTT+AGG | + | chr6_4:4647599-4647618 | Msa0972370:intron | 25.0% |
| !! | TATCTAAATGTTTAGGGTTA+GGG | + | chr6_4:4647600-4647619 | Msa0972370:intron | 25.0% |
| ! | AATTTAATGTACTTTACAGG+AGG | + | chr6_4:4647654-4647673 | Msa0972370:intron | 25.0% |
| ! | CTAACTTCAATTGATTAACT+AGG | - | chr6_4:4647893-4647912 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTCGACAAAGAA+AGG | + | chr6_4:4648151-4648170 | Msa0972370:three_prime_UTR | 25.0% |
| ! | TTTGTTAAAACATCCTTTCA+AGG | + | chr6_4:4648179-4648198 | Msa0972370:three_prime_UTR | 25.0% |
| TTTGGCGTGATGTTAATTTA+TGG | + | chr6_4:4640102-4640121 | Msa0972370:CDS | 30.0% | |
| TTGGCGTGATGTTAATTTAT+GGG | + | chr6_4:4640103-4640122 | Msa0972370:CDS | 30.0% | |
| ! | AACTTTTTATCACGATGATG+TGG | + | chr6_4:4640213-4640232 | Msa0972370:CDS | 30.0% |
| ! | TGAATGGTATTTTGTGAGTT+GGG | - | chr6_4:4640394-4640413 | None:intergenic | 30.0% |
| ! | ATGAATGGTATTTTGTGAGT+TGG | - | chr6_4:4640395-4640414 | None:intergenic | 30.0% |
| ACTCACAAAATACCATTCAT+TGG | + | chr6_4:4640395-4640414 | Msa0972370:CDS | 30.0% | |
| ATTCAAGGATGAAGAAAAGA+AGG | - | chr6_4:4640461-4640480 | None:intergenic | 30.0% | |
| ! | AGTTAGTTTACATACGACAT+TGG | + | chr6_4:4640585-4640604 | Msa0972370:CDS | 30.0% |
| !!! | CTCATGTTGATTTTAATAGG+AGG | + | chr6_4:4640761-4640780 | Msa0972370:intron | 30.0% |
| TTTAATAGGAGGTAGACTAA+TGG | + | chr6_4:4640772-4640791 | Msa0972370:intron | 30.0% | |
| !!! | TAATGACATTTTAACTCCTG+TGG | - | chr6_4:4641173-4641192 | None:intergenic | 30.0% |
| !!! | GATAGACTCGATTTTTAGTA+AGG | - | chr6_4:4641728-4641747 | None:intergenic | 30.0% |
| TTTGTCCATATCCTATATCT+TGG | + | chr6_4:4641986-4642005 | Msa0972370:intron | 30.0% | |
| AGAAACCAAGATATAGGATA+TGG | - | chr6_4:4641994-4642013 | None:intergenic | 30.0% | |
| ATTATTGCCAATAAGTTGCT+TGG | + | chr6_4:4642056-4642075 | Msa0972370:intron | 30.0% | |
| CAAATTTCCAAGCAACTTAT+TGG | - | chr6_4:4642066-4642085 | None:intergenic | 30.0% | |
| ATTCGTTATTATAGACCACA+TGG | - | chr6_4:4642443-4642462 | None:intergenic | 30.0% | |
| ! | TTTTTCTTTATAGAACCAGG+TGG | + | chr6_4:4642673-4642692 | Msa0972370:intron | 30.0% |
| ACAGTTATAACCTAGTTTCT+AGG | + | chr6_4:4642739-4642758 | Msa0972370:intron | 30.0% | |
| CAGTTATAACCTAGTTTCTA+GGG | + | chr6_4:4642740-4642759 | Msa0972370:intron | 30.0% | |
| TATATTAGCCCTAAGAAAAC+AGG | - | chr6_4:4643048-4643067 | None:intergenic | 30.0% | |
| TTTCTTAGGGCTAATATACT+TGG | + | chr6_4:4643050-4643069 | Msa0972370:CDS | 30.0% | |
| CATTGATGAGATTGTATTCT+TGG | - | chr6_4:4643095-4643114 | None:intergenic | 30.0% | |
| GAATACAATCTCATCAATGT+TGG | + | chr6_4:4643096-4643115 | Msa0972370:CDS | 30.0% | |
| TTCTGTATGGAAAATCAGTA+GGG | - | chr6_4:4643149-4643168 | None:intergenic | 30.0% | |
| ! | GATCCTTTTAATGAAAATGC+TGG | + | chr6_4:4643189-4643208 | Msa0972370:CDS | 30.0% |
| ! | CTTCCAGCATTTTCATTAAA+AGG | - | chr6_4:4643195-4643214 | None:intergenic | 30.0% |
| GAGTTAGTAACAATAGTCAA+TGG | - | chr6_4:4643385-4643404 | None:intergenic | 30.0% | |
| TATTTCATGGCTTAAGTTAG+GGG | - | chr6_4:4643411-4643430 | None:intergenic | 30.0% | |
| ! | TTTTTGCTTACATTTTGGAC+GGG | + | chr6_4:4643568-4643587 | Msa0972370:intron | 30.0% |
| CATATAAATAGAAGACAAGC+GGG | + | chr6_4:4643727-4643746 | Msa0972370:intron | 30.0% | |
| !!! | GATGCTACAATTTTTTTAGG+AGG | + | chr6_4:4643781-4643800 | Msa0972370:intron | 30.0% |
| AAAAAAGAGCTAACCCAAAA+AGG | - | chr6_4:4643931-4643950 | None:intergenic | 30.0% | |
| ! | TGTGCTTTTATACTCAACAA+GGG | - | chr6_4:4643957-4643976 | None:intergenic | 30.0% |
| ! | TTGTGCTTTTATACTCAACA+AGG | - | chr6_4:4643958-4643977 | None:intergenic | 30.0% |
| TTCAATTCATGATACACGAT+TGG | + | chr6_4:4644241-4644260 | Msa0972370:CDS | 30.0% | |
| CTAAAAATATTGTCACGTCA+CGG | - | chr6_4:4644398-4644417 | None:intergenic | 30.0% | |
| ATGTGTAGACTTTAACATCT+TGG | - | chr6_4:4644657-4644676 | None:intergenic | 30.0% | |
| TGTCTGAATATAATTGGTGA+TGG | - | chr6_4:4644684-4644703 | None:intergenic | 30.0% | |
| !!! | AAGTGGTTAGTTGGTTTTAA+TGG | - | chr6_4:4644778-4644797 | None:intergenic | 30.0% |
| GTTAAAGAAAAGTGGTTAGT+TGG | - | chr6_4:4644787-4644806 | None:intergenic | 30.0% | |
| AAACGAGTGTTAAAGAAAAG+TGG | - | chr6_4:4644795-4644814 | None:intergenic | 30.0% | |
| ! | GTTTTCTCTCTCATATTTGA+TGG | + | chr6_4:4644811-4644830 | Msa0972370:intron | 30.0% |
| ! | TTTGATGGTTGAGATTTCAA+TGG | + | chr6_4:4644826-4644845 | Msa0972370:intron | 30.0% |
| !! | TTTCAAGTTCTTCAAGACAA+AGG | + | chr6_4:4645190-4645209 | Msa0972370:CDS | 30.0% |
| TAGAAATATTCTTACCACCA+AGG | - | chr6_4:4645269-4645288 | None:intergenic | 30.0% | |
| GAACTTCTTCATAATGAAGA+TGG | + | chr6_4:4645522-4645541 | Msa0972370:CDS | 30.0% | |
| !! | CATTGTGTTCTAGAACAAAA+AGG | - | chr6_4:4645605-4645624 | None:intergenic | 30.0% |
| ! | TGATTTTGTATAGCAATGGT+TGG | - | chr6_4:4645776-4645795 | None:intergenic | 30.0% |
| ! | TGGATGATTTTGTATAGCAA+TGG | - | chr6_4:4645780-4645799 | None:intergenic | 30.0% |
| AAGAAATTCAAGGACACATT+TGG | + | chr6_4:4646254-4646273 | Msa0972370:CDS | 30.0% | |
| AGAAATTCAAGGACACATTT+GGG | + | chr6_4:4646255-4646274 | Msa0972370:CDS | 30.0% | |
| AATTCCTCAGTTAAAGAGTA+TGG | - | chr6_4:4646344-4646363 | None:intergenic | 30.0% | |
| ! | ATTAATGGTGGAGATTTGTT+AGG | - | chr6_4:4646440-4646459 | None:intergenic | 30.0% |
| TTGCCATACTCTTTGATTAA+TGG | - | chr6_4:4646455-4646474 | None:intergenic | 30.0% | |
| ATCATAACTATTACGCACTT+CGG | + | chr6_4:4646499-4646518 | Msa0972370:intron | 30.0% | |
| ! | TCTCTTAAAGTATTTAGGAC+CGG | + | chr6_4:4646609-4646628 | Msa0972370:intron | 30.0% |
| TTGTATGGTATTACGTACAT+AGG | + | chr6_4:4646673-4646692 | Msa0972370:intron | 30.0% | |
| ATTCCTATGAACGATTTGAT+TGG | + | chr6_4:4646696-4646715 | Msa0972370:CDS | 30.0% | |
| GATAGGAGTTCAAAAACAAT+TGG | + | chr6_4:4646746-4646765 | Msa0972370:CDS | 30.0% | |
| ! | TGGTCTTAAAAATAAAGGTG+TGG | - | chr6_4:4646915-4646934 | None:intergenic | 30.0% |
| !!! | TTTTAGGGTTACATATGCAT+AGG | + | chr6_4:4646945-4646964 | Msa0972370:intron | 30.0% |
| TAGCAAGATATAACCAATTC+AGG | + | chr6_4:4647057-4647076 | Msa0972370:CDS | 30.0% | |
| TCATGATACCTATCTCTAAA+TGG | + | chr6_4:4647090-4647109 | Msa0972370:CDS | 30.0% | |
| CATGATACCTATCTCTAAAT+GGG | + | chr6_4:4647091-4647110 | Msa0972370:CDS | 30.0% | |
| AAATCTTCCCATTTAGAGAT+AGG | - | chr6_4:4647101-4647120 | None:intergenic | 30.0% | |
| GGAAGATTTAACAGATGATA+AGG | + | chr6_4:4647112-4647131 | Msa0972370:CDS | 30.0% | |
| !! | AAAGTATTGGAAGAGATCTA+TGG | + | chr6_4:4647143-4647162 | Msa0972370:CDS | 30.0% |
| GTCCCTATAAAATGCAAATA+AGG | + | chr6_4:4647489-4647508 | Msa0972370:intron | 30.0% | |
| !!! | ACCATTTGTGTGTCATTTTT+GGG | - | chr6_4:4647793-4647812 | None:intergenic | 30.0% |
| !!! | AACCATTTGTGTGTCATTTT+TGG | - | chr6_4:4647794-4647813 | None:intergenic | 30.0% |
| !! | ATGTTTTGAATTTCAGTCGA+TGG | + | chr6_4:4648046-4648065 | Msa0972370:three_prime_UTR | 30.0% |
| !!! | TTTTTTCGACAAAGAAAGGA+TGG | + | chr6_4:4648155-4648174 | Msa0972370:three_prime_UTR | 30.0% |
| ATTCAATTGATAAGGCTCTC+AGG | + | chr6_4:4640126-4640145 | Msa0972370:CDS | 35.0% | |
| TCTCAGGAGAAACTATAACA+TGG | + | chr6_4:4640142-4640161 | Msa0972370:CDS | 35.0% | |
| TTGTTGCAACAGAGCATAAA+TGG | - | chr6_4:4640174-4640193 | None:intergenic | 35.0% | |
| ! | TGTGGAGTATTTGGAACATA+AGG | + | chr6_4:4640231-4640250 | Msa0972370:CDS | 35.0% |
| !! | TCTTGGTTTTTGCCAATGAA+TGG | - | chr6_4:4640410-4640429 | None:intergenic | 35.0% |
| TCTTCATCCTTGAATTGCAT+AGG | + | chr6_4:4640466-4640485 | Msa0972370:intron | 35.0% | |
| AATTGCAACATCACAAAGAG+AGG | - | chr6_4:4640557-4640576 | None:intergenic | 35.0% | |
| TTGTGATGTTGCAATTGATG+AGG | + | chr6_4:4640561-4640580 | Msa0972370:CDS | 35.0% | |
| GTTTACATACGACATTGGAA+CGG | + | chr6_4:4640590-4640609 | Msa0972370:CDS | 35.0% | |
| TTTACATACGACATTGGAAC+GGG | + | chr6_4:4640591-4640610 | Msa0972370:CDS | 35.0% | |
| GTAGTAGATAATAGCGAGTT+TGG | + | chr6_4:4640688-4640707 | Msa0972370:intron | 35.0% | |
| TCGTCACTTAACTTAAGTTC+AGG | - | chr6_4:4640944-4640963 | None:intergenic | 35.0% | |
| TTCAACACATGTCAACATGT+GGG | - | chr6_4:4641585-4641604 | None:intergenic | 35.0% | |
| TATCCAAAGAATCAAATCCG+TGG | + | chr6_4:4641897-4641916 | Msa0972370:intron | 35.0% | |
| GTGTGTAGAAACCAAGATAT+AGG | - | chr6_4:4642000-4642019 | None:intergenic | 35.0% | |
| ATATCTTGGTTTCTACACAC+AGG | + | chr6_4:4642000-4642019 | Msa0972370:intron | 35.0% | |
| !! | TCTTTCAAGTTTGGTGTCAT+TGG | - | chr6_4:4642313-4642332 | None:intergenic | 35.0% |
| TTGTATCAAGCAAAACCATG+TGG | + | chr6_4:4642425-4642444 | Msa0972370:intron | 35.0% | |
| TGCATGGAAATCTTTATGGA+TGG | - | chr6_4:4642503-4642522 | None:intergenic | 35.0% | |
| !! | GAAGAGAAAAGCATCTATGA+TGG | - | chr6_4:4642542-4642561 | None:intergenic | 35.0% |
| GTGGATAAGTCTATAGAACA+AGG | + | chr6_4:4642692-4642711 | Msa0972370:intron | 35.0% | |
| GATAAGTCTATAGAACAAGG+TGG | + | chr6_4:4642695-4642714 | Msa0972370:intron | 35.0% | |
| TGATTCAAACCCTAGAAACT+AGG | - | chr6_4:4642752-4642771 | None:intergenic | 35.0% | |
| !! | TAGTTTCTAGGGTTTGAATC+AGG | + | chr6_4:4642751-4642770 | Msa0972370:intron | 35.0% |
| GTTCTGTATGGAAAATCAGT+AGG | - | chr6_4:4643150-4643169 | None:intergenic | 35.0% | |
| ! | TTTTGCTTACATTTTGGACG+GGG | + | chr6_4:4643569-4643588 | Msa0972370:intron | 35.0% |
| ! | GCTAACCTTTTATTCGGTTT+CGG | - | chr6_4:4644021-4644040 | None:intergenic | 35.0% |
| ! | GGTGTAGCTAACCTTTTATT+CGG | - | chr6_4:4644027-4644046 | None:intergenic | 35.0% |
| TCTAGAGAGGAGAACATATA+AGG | + | chr6_4:4644179-4644198 | Msa0972370:CDS | 35.0% | |
| TTAATGTGATTGCAGCATCT+TGG | + | chr6_4:4644217-4644236 | Msa0972370:CDS | 35.0% | |
| ACACGATTGGATAGATCATA+TGG | + | chr6_4:4644254-4644273 | Msa0972370:CDS | 35.0% | |
| TCTGTTATGAATATGTGCTG+CGG | + | chr6_4:4644434-4644453 | Msa0972370:intron | 35.0% | |
| !!! | TGGTTAGTTGGTTTTAATGG+TGG | - | chr6_4:4644775-4644794 | None:intergenic | 35.0% |
| TGAAAGATTTAAGTGGGCAT+TGG | - | chr6_4:4645175-4645194 | None:intergenic | 35.0% | |
| ! | TGGAAGCAATCAAGAAGTTT+TGG | + | chr6_4:4645449-4645468 | Msa0972370:CDS | 35.0% |
| !!! | AAGAAGTTTTGGACAAAGTG+AGG | + | chr6_4:4645460-4645479 | Msa0972370:CDS | 35.0% |
| AAAGTGAGGACTTTCAAAGA+TGG | + | chr6_4:4645474-4645493 | Msa0972370:CDS | 35.0% | |
| AGGTGACATTCGTAATAGTT+GGG | + | chr6_4:4645557-4645576 | Msa0972370:CDS | 35.0% | |
| TGTACTCAAGTCATGTTTCA+TGG | - | chr6_4:4645714-4645733 | None:intergenic | 35.0% | |
| ACTCTATTAGAAGGAATACC+CGG | + | chr6_4:4645881-4645900 | Msa0972370:intron | 35.0% | |
| CAAAGATTCACACCATAGAT+TGG | + | chr6_4:4645961-4645980 | Msa0972370:CDS | 35.0% | |
| CTTAAAACTGACACTTTGCT+TGG | + | chr6_4:4645996-4646015 | Msa0972370:CDS | 35.0% | |
| ATGAAGAGAGCAGAAAATCA+TGG | + | chr6_4:4646314-4646333 | Msa0972370:CDS | 35.0% | |
| TGTTCCATACTCTTTAACTG+AGG | + | chr6_4:4646337-4646356 | Msa0972370:CDS | 35.0% | |
| CCATACTCTTTGATTAATGG+TGG | - | chr6_4:4646452-4646471 | None:intergenic | 35.0% | |
| CCACCATTAATCAAAGAGTA+TGG | + | chr6_4:4646449-4646468 | Msa0972370:intron | 35.0% | |
| ! | TTAAAGTATTTAGGACCGGA+GGG | + | chr6_4:4646613-4646632 | Msa0972370:intron | 35.0% |
| AGTCCAATCAAATCGTTCAT+AGG | - | chr6_4:4646702-4646721 | None:intergenic | 35.0% | |
| AACGATTTGATTGGACTACA+AGG | + | chr6_4:4646705-4646724 | Msa0972370:CDS | 35.0% | |
| TTGAACTCCTATCTCTATCA+AGG | - | chr6_4:4646739-4646758 | None:intergenic | 35.0% | |
| TGGATAGTTCCAAAGTTCTA+GGG | - | chr6_4:4646799-4646818 | None:intergenic | 35.0% | |
| ATGGATAGTTCCAAAGTTCT+AGG | - | chr6_4:4646800-4646819 | None:intergenic | 35.0% | |
| !! | AACTTTGGAACTATCCATCA+TGG | + | chr6_4:4646802-4646821 | Msa0972370:CDS | 35.0% |
| CATCTTCATTATGTGGTACT+AGG | - | chr6_4:4646836-4646855 | None:intergenic | 35.0% | |
| CTAGTACCACATAATGAAGA+TGG | + | chr6_4:4646834-4646853 | Msa0972370:CDS | 35.0% | |
| AGATATAACCAATTCAGGAG+AGG | + | chr6_4:4647062-4647081 | Msa0972370:CDS | 35.0% | |
| ATGGCAGAGAAGAAGATAAA+GGG | + | chr6_4:4647203-4647222 | Msa0972370:CDS | 35.0% | |
| !!! | TTTTATAGGGACTAGTTTGG+AGG | - | chr6_4:4647481-4647500 | None:intergenic | 35.0% |
| !!! | GCATTTTATAGGGACTAGTT+TGG | - | chr6_4:4647484-4647503 | None:intergenic | 35.0% |
| ! | AATGTTTAGGGTTAGGGTTT+AGG | + | chr6_4:4647606-4647625 | Msa0972370:intron | 35.0% |
| TTTCACAAGCAACTACAATG+AGG | + | chr6_4:4647694-4647713 | Msa0972370:CDS | 35.0% | |
| ACACTGAAAAGGGTTTGAAA+TGG | + | chr6_4:4647723-4647742 | Msa0972370:CDS | 35.0% | |
| ! | CACTGAAAAGGGTTTGAAAT+GGG | + | chr6_4:4647724-4647743 | Msa0972370:CDS | 35.0% |
| GAACACAACTGAAACCTTAA+AGG | + | chr6_4:4647748-4647767 | Msa0972370:CDS | 35.0% | |
| ACGATCAATCACATCCTTTA+AGG | - | chr6_4:4647765-4647784 | None:intergenic | 35.0% | |
| ACCCAAAAATGACACACAAA+TGG | + | chr6_4:4647789-4647808 | Msa0972370:CDS | 35.0% | |
| TTCAAGTGCTTTCTCTGTTT+GGG | + | chr6_4:4647820-4647839 | Msa0972370:CDS | 35.0% | |
| CACGCAAGTAAATTGGAATA+GGG | - | chr6_4:4647868-4647887 | None:intergenic | 35.0% | |
| ACACGCAAGTAAATTGGAAT+AGG | - | chr6_4:4647869-4647888 | None:intergenic | 35.0% | |
| ! | TCACGATGATGTGGAGTATT+TGG | + | chr6_4:4640222-4640241 | Msa0972370:CDS | 40.0% |
| GAAGAATGAAACGAATGCTC+AGG | + | chr6_4:4640274-4640293 | Msa0972370:CDS | 40.0% | |
| AGGTTAACACACCTTCTTGA+TGG | + | chr6_4:4640305-4640324 | Msa0972370:CDS | 40.0% | |
| ! | TAACACACCTTCTTGATGGT+TGG | + | chr6_4:4640309-4640328 | Msa0972370:CDS | 40.0% |
| CAATCAAATTCTTGCCACTG+CGG | - | chr6_4:4640352-4640371 | None:intergenic | 40.0% | |
| CATTGGCAAAAACCAAGAAG+AGG | + | chr6_4:4640412-4640431 | Msa0972370:CDS | 40.0% | |
| CACTTATGTCTACCTCTTCT+TGG | - | chr6_4:4640427-4640446 | None:intergenic | 40.0% | |
| TCCTTGAATTGCATAGGTAG+TGG | + | chr6_4:4640472-4640491 | Msa0972370:intron | 40.0% | |
| CCTTGAATTGCATAGGTAGT+GGG | + | chr6_4:4640473-4640492 | Msa0972370:intron | 40.0% | |
| ! | TTTTGCCTTAGACTCTACGA+AGG | + | chr6_4:4640642-4640661 | Msa0972370:CDS | 40.0% |
| TACAACCTTCGTAGAGTCTA+AGG | - | chr6_4:4640650-4640669 | None:intergenic | 40.0% | |
| GTTCAACACATGTCAACATG+TGG | - | chr6_4:4641586-4641605 | None:intergenic | 40.0% | |
| AATGTCACGTGTGTAAGCTA+AGG | - | chr6_4:4641773-4641792 | None:intergenic | 40.0% | |
| TTCAACACATGTCCACATGT+GGG | - | chr6_4:4641818-4641837 | None:intergenic | 40.0% | |
| CTACCACGGATTTGATTCTT+TGG | - | chr6_4:4641903-4641922 | None:intergenic | 40.0% | |
| TGGATCTGGGTACTATGAAT+AGG | - | chr6_4:4641942-4641961 | None:intergenic | 40.0% | |
| AAAAATCATCGCGATCCTCA+TGG | + | chr6_4:4642155-4642174 | Msa0972370:intron | 40.0% | |
| GGAAATCTTTATGGATGGCA+TGG | - | chr6_4:4642498-4642517 | None:intergenic | 40.0% | |
| CTGCTGCATGGAAATCTTTA+TGG | - | chr6_4:4642507-4642526 | None:intergenic | 40.0% | |
| TAAAGATTTCCATGCAGCAG+TGG | + | chr6_4:4642507-4642526 | Msa0972370:intron | 40.0% | |
| GTTCTATAGACTTATCCACC+TGG | - | chr6_4:4642691-4642710 | None:intergenic | 40.0% | |
| GGTGGATAAGCTGTTAAAAC+TGG | + | chr6_4:4642713-4642732 | Msa0972370:intron | 40.0% | |
| TGTACACTCCATTGACAAGT+TGG | + | chr6_4:4643005-4643024 | Msa0972370:CDS | 40.0% | |
| GTACACTCCATTGACAAGTT+GGG | + | chr6_4:4643006-4643025 | Msa0972370:CDS | 40.0% | |
| CCATATTCCCAACTTGTCAA+TGG | - | chr6_4:4643016-4643035 | None:intergenic | 40.0% | |
| ! | CCATTGACAAGTTGGGAATA+TGG | + | chr6_4:4643013-4643032 | Msa0972370:CDS | 40.0% |
| ! | ACCGTATGCCTGTTTTCTTA+GGG | + | chr6_4:4643037-4643056 | Msa0972370:CDS | 40.0% |
| GGCTAATATACTTGGCCATT+AGG | + | chr6_4:4643058-4643077 | Msa0972370:CDS | 40.0% | |
| TTGGTGAAGATGTCTCCTAA+TGG | - | chr6_4:4643076-4643095 | None:intergenic | 40.0% | |
| AATGTTGGAACAACACCTGT+AGG | + | chr6_4:4643111-4643130 | Msa0972370:CDS | 40.0% | |
| ATGTTGGAACAACACCTGTA+GGG | + | chr6_4:4643112-4643131 | Msa0972370:CDS | 40.0% | |
| TTTCCATACAGAACTGCTGA+TGG | + | chr6_4:4643156-4643175 | Msa0972370:CDS | 40.0% | |
| AATGAAAATGCTGGAAGCCA+AGG | + | chr6_4:4643198-4643217 | Msa0972370:CDS | 40.0% | |
| TTCTGCCAAAGAAAGATCCT+TGG | - | chr6_4:4643218-4643237 | None:intergenic | 40.0% | |
| ! | TTTGCTTACATTTTGGACGG+GGG | + | chr6_4:4643570-4643589 | Msa0972370:intron | 40.0% |
| AGTTGCCGAAACCGAATAAA+AGG | + | chr6_4:4644013-4644032 | Msa0972370:intron | 40.0% | |
| !! | TCTCCTCTCTAGAAGTTTTG+TGG | - | chr6_4:4644172-4644191 | None:intergenic | 40.0% |
| AGGAGAACATATAAGGACAC+AGG | + | chr6_4:4644186-4644205 | Msa0972370:CDS | 40.0% | |
| GGAGAACATATAAGGACACA+GGG | + | chr6_4:4644187-4644206 | Msa0972370:CDS | 40.0% | |
| AAAATTCGTGTTCTCAACGG+TGG | + | chr6_4:4644467-4644486 | Msa0972370:intron | 40.0% | |
| !! | CATTGGTTTGCAACTTCTCT+TGG | - | chr6_4:4645158-4645177 | None:intergenic | 40.0% |
| AAGACAAAGGAAATCCCAAC+TGG | + | chr6_4:4645203-4645222 | Msa0972370:CDS | 40.0% | |
| ! | AATCCCAACTGGTTTCTATG+AGG | + | chr6_4:4645214-4645233 | Msa0972370:CDS | 40.0% |
| ATTCTTACCACCAAGGTGTA+CGG | - | chr6_4:4645262-4645281 | None:intergenic | 40.0% | |
| ! | AGGGATGGAAGTGTGATATA+TGG | + | chr6_4:4645429-4645448 | Msa0972370:intron | 40.0% |
| GAAGATGGAACAGCAATTTC+AGG | + | chr6_4:4645537-4645556 | Msa0972370:CDS | 40.0% | |
| CAGGTGACATTCGTAATAGT+TGG | + | chr6_4:4645556-4645575 | Msa0972370:CDS | 40.0% | |
| ! | TGCTGTTTGTGATTCTCTCA+AGG | + | chr6_4:4645623-4645642 | Msa0972370:CDS | 40.0% |
| AGATCTTCATCTTCCAAGTC+CGG | - | chr6_4:4645903-4645922 | None:intergenic | 40.0% | |
| TCTTTATCGCTATGCTAGAC+TGG | + | chr6_4:4645920-4645939 | Msa0972370:CDS | 40.0% | |
| AAAACTGACACTTTGCTTGG+AGG | + | chr6_4:4645999-4646018 | Msa0972370:CDS | 40.0% | |
| TCGCATGTGTTCTTACCAAT+TGG | - | chr6_4:4646033-4646052 | None:intergenic | 40.0% | |
| TCCGGAAATTCCATATTGAG+CGG | + | chr6_4:4646281-4646300 | Msa0972370:CDS | 40.0% | |
| TCCGCTCAATATGGAATTTC+CGG | - | chr6_4:4646285-4646304 | None:intergenic | 40.0% | |
| ! | TTCCATATTGAGCGGATTTG+TGG | + | chr6_4:4646289-4646308 | Msa0972370:CDS | 40.0% |
| ! | TCCATATTGAGCGGATTTGT+GGG | + | chr6_4:4646290-4646309 | Msa0972370:CDS | 40.0% |
| TCTCTCAAATGCAGGAAATC+AGG | - | chr6_4:4646398-4646417 | None:intergenic | 40.0% | |
| ! | CTTAAAGTATTTAGGACCGG+AGG | + | chr6_4:4646612-4646631 | Msa0972370:intron | 40.0% |
| GAGAAGACCTTGATAGAGAT+AGG | + | chr6_4:4646729-4646748 | Msa0972370:CDS | 40.0% | |
| TCTGTGCCATCTTCATTATG+TGG | - | chr6_4:4646843-4646862 | None:intergenic | 40.0% | |
| CACAGAAAGATCTAACCATG+TGG | + | chr6_4:4646857-4646876 | Msa0972370:CDS | 40.0% | |
| AAGATCTAACCATGTGGACT+TGG | + | chr6_4:4646863-4646882 | Msa0972370:CDS | 40.0% | |
| GTTTATAGGGATAGAGAGAG+AGG | + | chr6_4:4647032-4647051 | Msa0972370:intron | 40.0% | |
| TGAATAGTCCTCTCCTGAAT+TGG | - | chr6_4:4647073-4647092 | None:intergenic | 40.0% | |
| ! | GATCTATGGTGATGATGTTG+AGG | + | chr6_4:4647157-4647176 | Msa0972370:CDS | 40.0% |
| CATGGCAGAGAAGAAGATAA+AGG | + | chr6_4:4647202-4647221 | Msa0972370:CDS | 40.0% | |
| TTTACCTAGATGCCATGAGA+AGG | - | chr6_4:4647262-4647281 | None:intergenic | 40.0% | |
| TGAGGAGACATACACTGAAA+AGG | + | chr6_4:4647712-4647731 | Msa0972370:CDS | 40.0% | |
| GAGGAGACATACACTGAAAA+GGG | + | chr6_4:4647713-4647732 | Msa0972370:CDS | 40.0% | |
| CTTCAAGTGCTTTCTCTGTT+TGG | + | chr6_4:4647819-4647838 | Msa0972370:CDS | 40.0% | |
| ATAGGGTTGTGTTTGTTTGG+TGG | - | chr6_4:4647851-4647870 | None:intergenic | 40.0% | |
| GGAATAGGGTTGTGTTTGTT+TGG | - | chr6_4:4647854-4647873 | None:intergenic | 40.0% | |
| CTAGGAACACGCAAGTAAAT+TGG | - | chr6_4:4647875-4647894 | None:intergenic | 40.0% | |
| ! | ACACCTTCTTGATGGTTGGA+AGG | + | chr6_4:4640313-4640332 | Msa0972370:CDS | 45.0% |
| !! | GGTATTTTGTGAGTTGGGCT+CGG | - | chr6_4:4640389-4640408 | None:intergenic | 45.0% |
| CCCACTACCTATGCAATTCA+AGG | - | chr6_4:4640476-4640495 | None:intergenic | 45.0% | |
| AATTGCTTGCGAAGACTGCT+TGG | + | chr6_4:4640527-4640546 | Msa0972370:intron | 45.0% | |
| GGAGTCACTCATGAACTAAC+CGG | + | chr6_4:4640793-4640812 | Msa0972370:intron | 45.0% | |
| GAGTCACTCATGAACTAACC+GGG | + | chr6_4:4640794-4640813 | Msa0972370:intron | 45.0% | |
| AGTCACTCATGAACTAACCG+GGG | + | chr6_4:4640795-4640814 | Msa0972370:intron | 45.0% | |
| ! | ATGGGAGTTAGCTTCAGATG+GGG | - | chr6_4:4640824-4640843 | None:intergenic | 45.0% |
| ! | CATGGGAGTTAGCTTCAGAT+GGG | - | chr6_4:4640825-4640844 | None:intergenic | 45.0% |
| ! | ACATGGGAGTTAGCTTCAGA+TGG | - | chr6_4:4640826-4640845 | None:intergenic | 45.0% |
| GTTCAACACATGTCCACATG+TGG | - | chr6_4:4641819-4641838 | None:intergenic | 45.0% | |
| ! | ACATTTTTGCCACTGCTGCA+TGG | - | chr6_4:4642519-4642538 | None:intergenic | 45.0% |
| ! | CACCGTATGCCTGTTTTCTT+AGG | + | chr6_4:4643036-4643055 | Msa0972370:CDS | 45.0% |
| GCCCTAAGAAAACAGGCATA+CGG | - | chr6_4:4643041-4643060 | None:intergenic | 45.0% | |
| TGTTGGAACAACACCTGTAG+GGG | + | chr6_4:4643113-4643132 | Msa0972370:CDS | 45.0% | |
| CTTCCATCAGCAGTTCTGTA+TGG | - | chr6_4:4643162-4643181 | None:intergenic | 45.0% | |
| GGAAGCCAAGGATCTTTCTT+TGG | + | chr6_4:4643210-4643229 | Msa0972370:CDS | 45.0% | |
| CCTCTTTCTTCTGATCCACA+GGG | - | chr6_4:4643248-4643267 | None:intergenic | 45.0% | |
| ACCTCTTTCTTCTGATCCAC+AGG | - | chr6_4:4643249-4643268 | None:intergenic | 45.0% | |
| TCATGGCTTAAGTTAGGGGA+GGG | - | chr6_4:4643407-4643426 | None:intergenic | 45.0% | |
| TTCATGGCTTAAGTTAGGGG+AGG | - | chr6_4:4643408-4643427 | None:intergenic | 45.0% | |
| GTTGTTGAAACCAGACCCAA+TGG | + | chr6_4:4644140-4644159 | Msa0972370:intron | 45.0% | |
| ! | TGGCCACAAAACTTCTAGAG+AGG | + | chr6_4:4644166-4644185 | Msa0972370:CDS | 45.0% |
| TCATATGGAAGACACTCAGC+AGG | + | chr6_4:4644269-4644288 | Msa0972370:CDS | 45.0% | |
| GGACCTCATAGAAACCAGTT+GGG | - | chr6_4:4645220-4645239 | None:intergenic | 45.0% | |
| TGGACCTCATAGAAACCAGT+TGG | - | chr6_4:4645221-4645240 | None:intergenic | 45.0% | |
| TGTACGGATGTTTGCATGTC+CGG | - | chr6_4:4645246-4645265 | None:intergenic | 45.0% | |
| ATGCAAACATCCGTACACCT+TGG | + | chr6_4:4645249-4645268 | Msa0972370:CDS | 45.0% | |
| GACATTCGTAATAGTTGGGC+TGG | + | chr6_4:4645561-4645580 | Msa0972370:CDS | 45.0% | |
| ! | TGTATAGCAATGGTTGGTCG+TGG | - | chr6_4:4645770-4645789 | None:intergenic | 45.0% |
| TTAGAAGGAATACCCGGACT+TGG | + | chr6_4:4645887-4645906 | Msa0972370:intron | 45.0% | |
| GATCTTCATCTTCCAAGTCC+GGG | - | chr6_4:4645902-4645921 | None:intergenic | 45.0% | |
| TCACACCATAGATTGGACTG+TGG | + | chr6_4:4645968-4645987 | Msa0972370:CDS | 45.0% | |
| AAGCTCCACAGTCCAATCTA+TGG | - | chr6_4:4645976-4645995 | None:intergenic | 45.0% | |
| AAGGACACATTTGGGCATTC+CGG | + | chr6_4:4646263-4646282 | Msa0972370:CDS | 45.0% | |
| TCAAATGCAGGAAATCAGGC+AGG | - | chr6_4:4646394-4646413 | None:intergenic | 45.0% | |
| CAGATGTGTCTCTCAAATGC+AGG | - | chr6_4:4646406-4646425 | None:intergenic | 45.0% | |
| CAGAAAGAAGATACTCCCTC+CGG | - | chr6_4:4646631-4646650 | None:intergenic | 45.0% | |
| TGATGTGCTTGTAGGTCTCA+TGG | + | chr6_4:4647184-4647203 | Msa0972370:CDS | 45.0% | |
| TCTTCCTTCTCATGGCATCT+AGG | + | chr6_4:4647255-4647274 | Msa0972370:CDS | 45.0% | |
| TGTACTTTACAGGAGGCTAG+AGG | + | chr6_4:4647661-4647680 | Msa0972370:intron | 45.0% | |
| GTACTTTACAGGAGGCTAGA+GGG | + | chr6_4:4647662-4647681 | Msa0972370:intron | 45.0% | |
| TCCTTTCAAGGAGACGTGAT+CGG | + | chr6_4:4648191-4648210 | Msa0972370:three_prime_UTR | 45.0% | |
| !!! | TTTTTTATTTTTTATAAAAC+TGG | - | chr6_4:4641021-4641040 | None:intergenic | 5.0% |
| !! | CAAAAAAAAAATATAATTAT+TGG | - | chr6_4:4642959-4642978 | None:intergenic | 5.0% |
| !!! | TTTTTTTGTTTTTTTTTTTA+TGG | + | chr6_4:4642971-4642990 | Msa0972370:intron | 5.0% |
| !! | TTCAAATATATAATAATATA+AGG | - | chr6_4:4645037-4645056 | None:intergenic | 5.0% |
| CGAATGCTCAGGTCGTTGAA+AGG | + | chr6_4:4640285-4640304 | Msa0972370:CDS | 50.0% | |
| CCTCCTTCCAACCATCAAGA+AGG | - | chr6_4:4640319-4640338 | None:intergenic | 50.0% | |
| ! | CCTTCTTGATGGTTGGAAGG+AGG | + | chr6_4:4640316-4640335 | Msa0972370:CDS | 50.0% |
| GAGGCTAAGATTATCCGCAG+TGG | + | chr6_4:4640335-4640354 | Msa0972370:CDS | 50.0% | |
| CATGTCAACATGTGGGTTCG+AGG | - | chr6_4:4641578-4641597 | None:intergenic | 50.0% | |
| GTCACGTGTGTAAGCTAAGG+AGG | - | chr6_4:4641770-4641789 | None:intergenic | 50.0% | |
| ATGTCCACATGTGGGTTCGA+GGG | - | chr6_4:4641810-4641829 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTCATTGGCTGCT+AGG | - | chr6_4:4642305-4642324 | None:intergenic | 50.0% |
| GAACAACACCTGTAGGGGTT+AGG | + | chr6_4:4643118-4643137 | Msa0972370:CDS | 50.0% | |
| TGGCAGAAACATTCTCCCTG+TGG | + | chr6_4:4643230-4643249 | Msa0972370:CDS | 50.0% | |
| CCCTGTGGATCAGAAGAAAG+AGG | + | chr6_4:4643245-4643264 | Msa0972370:CDS | 50.0% | |
| GTTGAAACCAGACCCAATGG+TGG | + | chr6_4:4644143-4644162 | Msa0972370:CDS | 50.0% | |
| ! | GTTTTGTGGCCACCACCATT+GGG | - | chr6_4:4644158-4644177 | None:intergenic | 50.0% |
| !! | AGTTTTGTGGCCACCACCAT+TGG | - | chr6_4:4644159-4644178 | None:intergenic | 50.0% |
| GGTTTCTATGAGGTCCAGAC+CGG | + | chr6_4:4645224-4645243 | Msa0972370:CDS | 50.0% | |
| CAAACATCCGTACACCTTGG+TGG | + | chr6_4:4645252-4645271 | Msa0972370:CDS | 50.0% | |
| AACATACCCGTGCATTCGCA+CGG | - | chr6_4:4645817-4645836 | None:intergenic | 50.0% | |
| GCCCACAAATCCGCTCAATA+TGG | - | chr6_4:4646294-4646313 | None:intergenic | 50.0% | |
| !! | TGGAGATTTGTTAGGCCCAG+GGG | - | chr6_4:4646432-4646451 | None:intergenic | 50.0% |
| !! | GTGGAGATTTGTTAGGCCCA+GGG | - | chr6_4:4646433-4646452 | None:intergenic | 50.0% |
| TCAATGGGTCACCAAGCTTG+TGG | + | chr6_4:4646771-4646790 | Msa0972370:CDS | 50.0% | |
| CAATGGGTCACCAAGCTTGT+GGG | + | chr6_4:4646772-4646791 | Msa0972370:CDS | 50.0% | |
| AATGGGTCACCAAGCTTGTG+GGG | + | chr6_4:4646773-4646792 | Msa0972370:CDS | 50.0% | |
| ACTAGGTCTCTGAGCCATGA+TGG | - | chr6_4:4646819-4646838 | None:intergenic | 50.0% | |
| GAGGAGCTTGATGTGCTTGT+AGG | + | chr6_4:4647176-4647195 | Msa0972370:CDS | 50.0% | |
| CCTTTCAAGGAGACGTGATC+GGG | + | chr6_4:4648192-4648211 | Msa0972370:three_prime_UTR | 50.0% | |
| TGTCCACATGTGGGTTCGAG+GGG | - | chr6_4:4641809-4641828 | None:intergenic | 55.0% | |
| CATGTCCACATGTGGGTTCG+AGG | - | chr6_4:4641811-4641830 | None:intergenic | 55.0% | |
| !! | GGTGTCATTGGCTGCTAGGA+GGG | - | chr6_4:4642301-4642320 | None:intergenic | 55.0% |
| !! | TGGTGTCATTGGCTGCTAGG+AGG | - | chr6_4:4642302-4642321 | None:intergenic | 55.0% |
| GGGTTTGACCTAACCCCTAC+AGG | - | chr6_4:4643129-4643148 | None:intergenic | 55.0% | |
| GAAACCAGACCCAATGGTGG+TGG | + | chr6_4:4644146-4644165 | Msa0972370:CDS | 55.0% | |
| GGATGTTTGCATGTCCGGTC+TGG | - | chr6_4:4645241-4645260 | None:intergenic | 55.0% | |
| GCATTCGCACGGATACTGGT+TGG | - | chr6_4:4645806-4645825 | None:intergenic | 55.0% | |
| CCAGTATCCGTGCGAATGCA+CGG | + | chr6_4:4645807-4645826 | Msa0972370:intron | 55.0% | |
| CAGTATCCGTGCGAATGCAC+GGG | + | chr6_4:4645808-4645827 | Msa0972370:intron | 55.0% | |
| TGCAGGAAATCAGGCAGGAG+TGG | - | chr6_4:4646389-4646408 | None:intergenic | 55.0% | |
| !! | AGATTTGTTAGGCCCAGGGG+AGG | - | chr6_4:4646429-4646448 | None:intergenic | 55.0% |
| !! | GGTGGAGATTTGTTAGGCCC+AGG | - | chr6_4:4646434-4646453 | None:intergenic | 55.0% |
| CTTGTGGGGCCCTAGAACTT+TGG | + | chr6_4:4646787-4646806 | Msa0972370:CDS | 55.0% | |
| CAAGAGCAGCCAAGTCCACA+TGG | - | chr6_4:4646875-4646894 | None:intergenic | 55.0% | |
| CCCGATCACGTCTCCTTGAA+AGG | - | chr6_4:4648195-4648214 | None:intergenic | 55.0% | |
| AGCTTCAGATGGGGCTACCC+CGG | - | chr6_4:4640815-4640834 | None:intergenic | 60.0% | |
| GAACCCCTCGAACCCACATG+TGG | + | chr6_4:4641803-4641822 | Msa0972370:intron | 60.0% | |
| ! | GTCATTGGCTGCTAGGAGGG+TGG | - | chr6_4:4642298-4642317 | None:intergenic | 60.0% |
| ! | GCACGGATACTGGTTGGTCG+TGG | - | chr6_4:4645800-4645819 | None:intergenic | 60.0% |
| CCGTGCATTCGCACGGATAC+TGG | - | chr6_4:4645810-4645829 | None:intergenic | 60.0% | |
| ! | TTGGAGGCATGCGCGCCAAT+TGG | + | chr6_4:4646015-4646034 | Msa0972370:CDS | 60.0% |
| AGAGACACATCTGCCTCCCC+TGG | + | chr6_4:4646413-4646432 | Msa0972370:CDS | 60.0% | |
| GAGACACATCTGCCTCCCCT+GGG | + | chr6_4:4646414-4646433 | Msa0972370:CDS | 60.0% | |
| !! | GTTCTAGGGCCCCACAAGCT+TGG | - | chr6_4:4646785-4646804 | None:intergenic | 60.0% |
| GTGGCCACCACCATTGGGTC+TGG | - | chr6_4:4644153-4644172 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 4640095 | 4648239 | 4640095 | ID=Msa0972370;Name=Msa0972370 |
| chr6_4 | mRNA | 4640095 | 4648239 | 4640095 | ID=Msa0972370-mRNA-1;Parent=Msa0972370;Name=Msa0972370-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.1|0.09|0.81|1|1|11|341|756 |
| chr6_4 | exon | 4640095 | 4640433 | 4640095 | ID=Msa0972370-mRNA-1:exon:1985;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4640541 | 4640663 | 4640541 | ID=Msa0972370-mRNA-1:exon:1986;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4643003 | 4643266 | 4643003 | ID=Msa0972370-mRNA-1:exon:1987;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4644141 | 4644290 | 4644141 | ID=Msa0972370-mRNA-1:exon:1988;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4645140 | 4645273 | 4645140 | ID=Msa0972370-mRNA-1:exon:1989;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4645431 | 4645644 | 4645431 | ID=Msa0972370-mRNA-1:exon:1990;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4645891 | 4646036 | 4645891 | ID=Msa0972370-mRNA-1:exon:1991;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4646238 | 4646465 | 4646238 | ID=Msa0972370-mRNA-1:exon:1992;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4646695 | 4646897 | 4646695 | ID=Msa0972370-mRNA-1:exon:1993;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4647033 | 4647276 | 4647033 | ID=Msa0972370-mRNA-1:exon:1994;Parent=Msa0972370-mRNA-1 |
| chr6_4 | exon | 4647673 | 4648239 | 4647673 | ID=Msa0972370-mRNA-1:exon:1995;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4640095 | 4640433 | 4640095 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4640541 | 4640663 | 4640541 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4643003 | 4643266 | 4643003 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4644141 | 4644290 | 4644141 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4645140 | 4645273 | 4645140 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4645431 | 4645644 | 4645431 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4645891 | 4646036 | 4645891 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4646238 | 4646465 | 4646238 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4646695 | 4646897 | 4646695 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4647033 | 4647276 | 4647033 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | CDS | 4647673 | 4647898 | 4647673 | ID=Msa0972370-mRNA-1:cds;Parent=Msa0972370-mRNA-1 |
| chr6_4 | three_prime_UTR | 4647899 | 4648239 | 4647899 | ID=Msa0972370-mRNA-1:three_prime_utr;Parent=Msa0972370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
