AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0484410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484410 MtrunA17_Chr5g0397971 98.965 483 5 0 1 483 1 483 0.0 1002
Msa0484410 MtrunA17_Chr5g0403931 35.232 474 288 9 6 467 11 477 8.67e-100 308
Msa0484410 MtrunA17_Chr3g0113321 34.889 450 279 6 30 472 28 470 7.74e-96 298
Msa0484410 MtrunA17_Chr3g0078411 33.761 468 294 11 5 468 7 462 3.85e-95 295
Msa0484410 MtrunA17_Chr6g0455461 34.188 468 290 12 6 468 8 462 7.90e-95 295
Msa0484410 MtrunA17_Chr7g0219961 32.196 469 307 7 1 468 3 461 6.50e-92 287
Msa0484410 MtrunA17_Chr8g0372411 34.048 420 262 5 32 443 40 452 8.23e-88 277
Msa0484410 MtrunA17_Chr7g0226771 32.432 481 306 10 3 475 8 477 1.20e-83 266
Msa0484410 MtrunA17_Chr8g0373441 35.476 389 238 6 31 411 33 416 2.25e-82 261
Msa0484410 MtrunA17_Chr8g0341951 31.042 451 293 6 2 443 5 446 3.87e-82 262
Msa0484410 MtrunA17_Chr6g0478161 32.096 458 290 8 29 477 48 493 8.76e-82 262
Msa0484410 MtrunA17_Chr4g0044851 30.602 415 279 5 30 443 36 442 1.07e-71 234
Msa0484410 MtrunA17_Chr5g0408181 30.045 446 291 11 3 443 6 435 2.88e-70 231
Msa0484410 MtrunA17_Chr8g0369791 29.111 450 299 10 27 470 30 465 3.28e-68 225
Msa0484410 MtrunA17_Chr3g0089361 30.569 422 280 7 30 446 39 452 1.02e-66 222
Msa0484410 MtrunA17_Chr8g0381571 28.571 462 309 8 2 445 5 463 2.45e-65 218
Msa0484410 MtrunA17_Chr2g0293421 28.947 456 306 7 1 442 8 459 2.50e-65 218
Msa0484410 MtrunA17_Chr8g0381541 28.510 463 310 8 2 446 5 464 8.58e-65 217
Msa0484410 MtrunA17_Chr4g0044841 30.594 438 290 7 30 464 37 463 4.49e-64 215
Msa0484410 MtrunA17_Chr8g0380471 27.477 444 311 7 31 467 34 473 4.82e-64 215
Msa0484410 MtrunA17_Chr5g0400421 28.850 461 308 9 2 446 9 465 1.69e-63 214
Msa0484410 MtrunA17_Chr2g0293411 27.447 470 320 8 1 453 4 469 1.30e-62 211
Msa0484410 MtrunA17_Chr1g0153371 28.764 445 300 8 6 442 5 440 4.50e-62 209
Msa0484410 MtrunA17_Chr3g0107501 27.512 418 297 3 31 443 33 449 4.68e-62 209
Msa0484410 MtrunA17_Chr5g0443401 27.511 458 318 8 20 470 27 477 5.18e-62 209
Msa0484410 MtrunA17_Chr1g0164371 28.989 445 307 5 28 471 41 477 6.78e-62 209
Msa0484410 MtrunA17_Chr5g0443731 27.169 438 312 4 23 455 21 456 8.40e-61 206
Msa0484410 MtrunA17_Chr3g0141801 26.923 468 323 8 23 476 31 493 4.02e-60 205
Msa0484410 MtrunA17_Chr3g0089351 29.101 378 259 4 70 446 1 370 7.07e-60 201
Msa0484410 MtrunA17_Chr3g0107511 27.938 451 302 5 31 467 33 474 1.36e-59 203
Msa0484410 MtrunA17_Chr8g0388921 27.725 422 296 5 31 446 34 452 2.16e-59 202
Msa0484410 MtrunA17_Chr8g0339861 29.139 453 302 10 1 442 13 457 5.00e-59 202
Msa0484410 MtrunA17_Chr5g0400411 27.983 461 311 10 2 446 9 464 8.00e-52 182
Msa0484410 MtrunA17_Chr8g0372711 25.935 428 303 6 22 443 37 456 4.70e-48 172
Msa0484410 MtrunA17_Chr8g0380931 26.415 424 295 10 31 444 62 478 1.09e-44 164
Msa0484410 MtrunA17_Chr5g0404861 41.860 129 75 0 315 443 5 133 2.10e-34 126
Msa0484410 MtrunA17_Chr5g0404881 28.319 226 158 2 2 223 3 228 8.88e-29 113
Msa0484410 MtrunA17_Chr5g0437001 37.342 158 83 3 332 474 1 157 5.00e-28 109
Msa0484410 MtrunA17_Chr8g0381551 24.534 322 224 7 2 305 5 325 7.22e-27 110
Msa0484410 MtrunA17_Chr8g0381561 40.351 114 66 1 332 445 3 114 7.98e-26 102
Msa0484410 MtrunA17_Chr6g0463551 34.737 190 114 5 183 364 2 189 2.32e-25 103
Msa0484410 MtrunA17_Chr2g0310391 24.580 476 307 20 1 440 1 460 1.19e-23 103
Msa0484410 MtrunA17_Chr1g0161671 24.382 283 205 5 31 305 29 310 1.47e-23 101
Msa0484410 MtrunA17_Chr4g0000171 23.620 326 228 7 2 310 5 326 5.37e-23 99.8
Msa0484410 MtrunA17_Chr5g0436981 34.266 143 93 1 30 172 27 168 9.68e-23 95.5
Msa0484410 MtrunA17_Chr2g0310381 24.580 476 299 22 1 436 1 456 1.07e-22 100
Msa0484410 MtrunA17_Chr8g0382901 23.617 470 302 14 3 444 2 442 2.46e-22 100
Msa0484410 MtrunA17_Chr8g0382901 24.946 461 286 16 22 444 483 921 1.85e-20 95.1
Msa0484410 MtrunA17_Chr0c19g0493771 23.165 436 298 9 67 470 218 648 3.68e-22 100
Msa0484410 MtrunA17_Chr4g0000151 38.261 115 68 2 332 446 6 117 4.36e-22 92.4
Msa0484410 MtrunA17_Chr3g0089291 24.895 237 174 3 70 305 1 234 1.41e-21 93.6
Msa0484410 MtrunA17_Chr5g0403321 24.283 453 291 16 30 443 33 472 3.04e-21 96.7
Msa0484410 MtrunA17_Chr4g0047631 23.110 463 317 14 9 444 29 479 3.19e-21 96.7
Msa0484410 MtrunA17_Chr3g0089381 28.646 192 134 2 174 364 3 192 4.63e-21 91.7
Msa0484410 MtrunA17_Chr1g0174481 23.139 497 314 18 12 462 15 489 8.92e-21 95.1
Msa0484410 MtrunA17_Chr4g0057001 23.991 446 293 20 31 443 50 482 2.18e-20 94.0
Msa0484410 MtrunA17_Chr4g0047691 23.504 468 312 17 9 444 29 482 7.66e-20 92.4
Msa0484410 MtrunA17_Chr4g0058231 21.206 481 327 17 1 443 1 467 8.39e-20 92.0
Msa0484410 MtrunA17_Chr4g0000161 25.088 283 200 7 31 305 43 321 1.15e-19 90.1
Msa0484410 MtrunA17_Chr4g0013471 23.151 311 227 6 11 313 23 329 2.16e-19 90.1
Msa0484410 MtrunA17_Chr6g0463541 39.252 107 55 3 360 460 2 104 4.06e-19 82.8
Msa0484410 MtrunA17_Chr4g0058191 20.975 472 328 17 1 443 1 456 1.23e-18 88.6
Msa0484410 MtrunA17_Chr5g0445421 21.739 460 319 13 3 444 84 520 2.81e-18 87.8
Msa0484410 MtrunA17_Chr4g0047661 22.410 473 320 18 6 444 25 484 3.32e-18 87.4
Msa0484410 MtrunA17_Chr1g0174471 21.610 472 315 14 33 462 52 510 8.86e-18 85.9
Msa0484410 MtrunA17_Chr5g0436991 30.986 142 92 2 168 307 18 155 1.13e-17 80.1
Msa0484410 MtrunA17_Chr8g0361471 20.985 467 322 14 12 444 15 468 1.47e-17 85.1
Msa0484410 MtrunA17_Chr3g0094171 22.717 449 302 15 30 444 39 476 1.56e-17 85.1
Msa0484410 MtrunA17_Chr5g0419691 23.830 470 314 15 23 457 21 481 2.21e-17 84.7
Msa0484410 MtrunA17_Chr2g0286091 22.551 439 287 16 31 434 41 461 2.42e-17 84.7
Msa0484410 MtrunA17_Chr5g0401691 21.806 454 314 11 30 456 50 489 2.60e-17 84.7
Msa0484410 MtrunA17_Chr4g0011871 22.838 451 310 14 23 443 21 463 2.80e-17 84.3
Msa0484410 MtrunA17_Chr5g0445451 19.960 496 354 15 3 470 10 490 3.71e-17 84.0
Msa0484410 MtrunA17_Chr1g0176831 22.096 439 289 12 60 460 87 510 3.73e-17 84.0
Msa0484410 MtrunA17_Chr1g0160851 22.440 459 294 18 30 449 33 468 3.94e-17 84.0
Msa0484410 MtrunA17_Chr1g0198191 21.957 460 307 14 23 443 37 483 6.51e-17 83.2
Msa0484410 MtrunA17_Chr5g0401681 22.173 451 296 15 31 446 32 462 7.79e-17 83.2
Msa0484410 MtrunA17_Chr5g0445441 20.464 474 329 12 3 444 51 508 8.64e-17 83.2
Msa0484410 MtrunA17_Chr2g0314731 21.803 477 313 14 23 460 25 480 2.63e-16 81.3
Msa0484410 MtrunA17_Chr8g0344181 22.717 449 299 13 31 444 38 473 2.92e-16 81.3
Msa0484410 MtrunA17_Chr4g0056951 26.506 249 159 9 222 451 242 485 2.99e-16 81.3
Msa0484410 MtrunA17_Chr5g0445381 21.413 467 319 13 10 444 48 498 4.38e-16 80.9
Msa0484410 MtrunA17_Chr6g0465511 20.713 449 307 15 31 444 34 468 4.39e-16 80.9
Msa0484410 MtrunA17_Chr5g0396521 27.027 259 144 7 219 441 289 538 4.41e-16 80.9
Msa0484410 MtrunA17_Chr4g0011901 23.128 454 294 17 28 443 26 462 4.50e-16 80.5
Msa0484410 MtrunA17_Chr1g0200961 21.649 485 319 14 3 448 6 468 6.08e-16 80.1
Msa0484410 MtrunA17_Chr1g0160861 24.893 233 158 7 226 449 85 309 7.04e-16 79.0
Msa0484410 MtrunA17_Chr1g0174461 21.522 460 303 18 32 450 36 478 1.06e-15 79.7
Msa0484410 MtrunA17_Chr6g0466331 20.490 449 308 15 31 444 34 468 1.20e-15 79.3
Msa0484410 MtrunA17_Chr1g0207841 22.992 361 236 12 121 444 126 481 1.30e-15 79.3
Msa0484410 MtrunA17_Chr4g0058201 21.142 473 332 17 21 463 17 478 1.56e-15 79.0
Msa0484410 MtrunA17_Chr6g0451781 28.947 228 139 8 226 435 298 520 1.88e-15 79.0
Msa0484410 MtrunA17_Chr3g0101671 20.971 453 311 14 26 444 33 472 2.52e-15 78.2
Msa0484410 MtrunA17_Chr2g0280071 22.656 512 318 22 8 472 40 520 3.08e-15 78.6
Msa0484410 MtrunA17_Chr7g0235551 23.529 459 290 17 30 443 32 474 3.85e-15 77.8
Msa0484410 MtrunA17_Chr7g0218611 21.786 459 320 12 20 448 22 471 4.61e-15 77.4
Msa0484410 MtrunA17_Chr5g0395331 23.176 466 300 17 18 444 25 471 6.51e-15 77.0
Msa0484410 MtrunA17_Chr4g0030711 21.090 422 286 11 65 444 66 482 8.00e-15 77.0
Msa0484410 MtrunA17_Chr6g0472311 26.522 230 154 5 247 465 285 510 8.35e-15 76.6
Msa0484410 MtrunA17_Chr1g0151221 21.519 474 294 15 33 444 41 498 8.41e-15 76.6
Msa0484410 MtrunA17_Chr1g0197851 20.259 464 323 14 13 444 14 462 1.06e-14 76.3
Msa0484410 MtrunA17_Chr8g0344191 22.555 501 277 17 11 444 49 505 1.55e-14 75.9
Msa0484410 MtrunA17_Chr7g0265611 25.439 228 154 6 227 443 261 483 1.83e-14 75.9
Msa0484410 MtrunA17_Chr4g0011881 24.406 463 292 19 20 443 19 462 2.16e-14 75.5
Msa0484410 MtrunA17_Chr3g0116741 22.198 464 313 15 19 449 39 487 2.55e-14 75.1
Msa0484410 MtrunA17_Chr5g0403351 20.940 468 322 16 12 443 14 469 3.06e-14 75.1
Msa0484410 MtrunA17_Chr8g0346261 24.268 239 170 5 220 452 289 522 4.03e-14 74.7
Msa0484410 MtrunA17_Chr2g0314721 25.652 230 160 4 236 460 268 491 4.20e-14 74.3
Msa0484410 MtrunA17_Chr1g0197881 20.557 467 324 15 9 444 11 461 4.62e-14 74.3
Msa0484410 MtrunA17_Chr1g0197891 20.594 471 327 16 7 444 6 462 6.03e-14 73.9
Msa0484410 MtrunA17_Chr8g0356001 22.698 467 292 19 29 451 39 480 6.80e-14 73.9
Msa0484410 MtrunA17_Chr3g0101571 21.749 446 308 15 28 444 33 466 8.25e-14 73.6
Msa0484410 MtrunA17_Chr4g0058261 21.696 401 270 14 79 444 107 498 8.66e-14 73.6
Msa0484410 MtrunA17_Chr5g0445531 21.412 439 310 13 31 444 38 466 9.18e-14 73.6
Msa0484410 MtrunA17_Chr7g0224551 20.949 506 336 17 2 460 8 496 1.40e-13 72.8
Msa0484410 MtrunA17_Chr7g0224561 20.751 506 337 17 2 460 8 496 1.50e-13 72.8
Msa0484410 MtrunA17_Chr3g0089371 28.387 155 102 5 30 178 39 190 1.58e-13 69.7
Msa0484410 MtrunA17_Chr1g0161641 38.462 78 46 1 365 442 13 88 2.16e-13 65.9
Msa0484410 MtrunA17_Chr2g0314781 28.571 168 113 4 296 460 4 167 2.56e-13 68.2
Msa0484410 MtrunA17_Chr4g0058211 26.111 180 122 4 271 443 9 184 3.56e-13 68.9
Msa0484410 MtrunA17_Chr5g0446161 19.624 479 333 15 1 444 6 467 3.60e-13 71.6
Msa0484410 MtrunA17_Chr3g0082701 26.316 228 147 8 233 446 280 500 3.73e-13 71.6
Msa0484410 MtrunA17_Chr3g0101581 21.474 475 330 17 6 450 14 475 4.22e-13 71.2
Msa0484410 MtrunA17_Chr1g0161651 22.951 305 184 8 15 271 27 328 4.70e-13 70.1
Msa0484410 MtrunA17_Chr1g0163421 22.117 529 326 24 3 470 37 540 5.36e-13 71.2
Msa0484410 MtrunA17_Chr3g0135841 20.641 499 323 14 8 444 19 506 5.39e-13 71.2
Msa0484410 MtrunA17_Chr4g0024771 21.616 495 335 14 9 472 20 492 1.19e-12 70.1
Msa0484410 MtrunA17_Chr4g0035921 21.341 492 310 21 3 443 14 479 1.19e-12 70.1
Msa0484410 MtrunA17_Chr5g0430101 22.321 448 297 17 26 436 31 464 1.21e-12 70.1
Msa0484410 MtrunA17_Chr5g0430031 20.000 470 301 17 23 444 29 471 2.15e-12 69.3
Msa0484410 MtrunA17_Chr8g0355961 23.077 468 299 19 24 451 34 480 3.07e-12 68.6
Msa0484410 MtrunA17_Chr8g0351401 25.417 240 157 7 226 444 243 481 3.36e-12 68.6
Msa0484410 MtrunA17_Chr8g0351421 24.803 254 173 6 211 448 234 485 3.58e-12 68.6
Msa0484410 MtrunA17_Chr2g0280081 23.409 440 281 19 56 451 554 981 5.08e-12 68.6
Msa0484410 MtrunA17_Chr4g0004481 23.409 487 315 22 1 448 1 468 5.42e-12 67.8
Msa0484410 MtrunA17_Chr1g0163451 22.264 530 324 23 3 470 21 524 5.92e-12 67.8
Msa0484410 MtrunA17_Chr7g0227281 20.759 395 283 10 106 470 100 494 1.22e-11 66.6
Msa0484410 MtrunA17_Chr4g0063221 22.824 425 292 11 50 444 73 491 1.27e-11 66.6
Msa0484410 MtrunA17_Chr4g0039391 24.576 236 170 4 226 457 251 482 1.43e-11 66.6
Msa0484410 MtrunA17_Chr7g0254641 21.311 488 313 18 15 450 19 487 1.45e-11 66.6
Msa0484410 MtrunA17_Chr1g0167321 20.085 473 333 14 31 472 34 492 1.47e-11 66.6
Msa0484410 MtrunA17_Chr7g0218601 24.107 224 158 5 230 448 254 470 1.54e-11 66.6
Msa0484410 MtrunA17_Chr4g0053621 21.298 493 324 17 3 456 9 476 1.61e-11 66.2
Msa0484410 MtrunA17_Chr3g0086651 26.238 202 138 3 256 450 282 479 1.78e-11 66.2
Msa0484410 MtrunA17_Chr2g0304871 24.835 455 283 20 30 436 36 479 1.92e-11 66.2
Msa0484410 MtrunA17_Chr7g0248991 24.150 294 191 6 144 410 77 365 4.23e-11 64.7
Msa0484410 MtrunA17_Chr6g0466941 25.328 229 150 8 245 458 283 505 5.28e-11 64.7
Msa0484410 MtrunA17_Chr1g0210091 22.148 447 279 19 67 470 97 517 5.38e-11 64.7
Msa0484410 MtrunA17_Chr1g0205371 21.339 478 323 17 1 444 7 465 7.18e-11 64.3
Msa0484410 MtrunA17_Chr8g0373431 35.385 65 42 0 406 470 2 66 7.62e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484410 AT1G12740.1 74.468 470 120 0 1 470 1 470 0.0 754
Msa0484410 AT1G12740.2 73.739 476 119 1 1 470 1 476 0.0 749
Msa0484410 AT1G12740.4 73.529 476 120 1 1 470 1 476 0.0 748
Msa0484410 AT1G12740.3 73.901 364 95 0 1 364 1 364 0.0 569
Msa0484410 AT1G78490.1 40.717 474 277 4 3 473 7 479 1.55e-132 392
Msa0484410 AT5G48000.2 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.4 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.7 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.6 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.5 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.3 41.794 457 262 4 16 469 20 475 1.04e-131 390
Msa0484410 AT5G48000.1 41.794 457 262 4 16 469 61 516 9.42e-131 389
Msa0484410 AT1G55940.2 40.833 480 272 8 1 469 13 491 1.16e-129 385
Msa0484410 AT1G55940.1 41.372 452 253 8 1 441 13 463 3.54e-124 370
Msa0484410 AT3G44970.1 38.397 474 283 6 7 473 8 479 1.16e-115 349
Msa0484410 AT1G78490.2 41.000 400 232 4 3 399 7 405 9.05e-110 332
Msa0484410 AT4G15300.2 35.870 460 287 6 15 472 19 472 4.44e-104 319
Msa0484410 AT4G15300.3 35.870 460 287 6 15 472 9 462 4.80e-104 318
Msa0484410 AT4G15310.1 35.356 478 297 9 1 472 4 475 1.79e-101 312
Msa0484410 AT1G65670.1 34.874 476 296 8 6 477 8 473 1.88e-97 302
Msa0484410 AT3G50660.1 34.576 483 276 8 23 468 31 510 5.53e-96 299
Msa0484410 AT4G15393.2 34.322 472 293 11 2 468 8 467 1.18e-95 297
Msa0484410 AT4G15396.1 34.565 460 290 8 19 474 23 475 2.01e-95 297
Msa0484410 AT4G15300.1 34.025 482 288 8 15 472 9 484 2.99e-95 296
Msa0484410 AT5G05690.1 35.440 443 280 5 31 471 31 469 1.94e-94 294
Msa0484410 AT4G15396.3 34.004 447 280 10 2 443 8 444 1.30e-90 284
Msa0484410 AT3G30180.1 33.121 471 298 8 3 468 5 463 1.20e-87 276
Msa0484410 AT3G19270.2 32.071 449 296 5 1 449 4 443 4.41e-87 275
Msa0484410 AT3G19270.1 31.603 443 295 4 1 443 4 438 7.29e-85 268
Msa0484410 AT4G15396.2 31.381 478 292 10 2 474 8 454 5.48e-83 264
Msa0484410 AT1G73340.1 32.667 450 285 6 30 471 42 481 7.99e-83 265
Msa0484410 AT4G36380.1 32.143 448 296 5 31 472 69 514 5.05e-82 263
Msa0484410 AT5G38970.1 31.423 471 306 8 3 468 5 463 1.51e-81 261
Msa0484410 AT3G50660.2 35.396 404 231 7 23 399 31 431 2.63e-80 256
Msa0484410 AT5G05690.2 35.753 372 234 4 31 401 31 398 1.11e-79 254
Msa0484410 AT3G13730.1 33.100 429 267 6 26 443 46 465 2.51e-79 256
Msa0484410 AT3G13730.2 33.019 424 264 6 30 442 50 464 5.09e-78 251
Msa0484410 AT4G15393.1 32.836 402 255 9 2 399 8 398 3.85e-77 247
Msa0484410 AT4G15396.4 33.085 402 256 8 2 399 8 400 1.25e-76 246
Msa0484410 AT5G45340.1 29.598 473 314 10 1 470 6 462 1.22e-74 243
Msa0484410 AT5G45340.2 30.088 452 298 9 1 450 6 441 2.48e-73 238
Msa0484410 AT4G15393.3 31.592 402 227 8 2 399 8 365 3.36e-71 231
Msa0484410 AT5G14400.2 31.066 441 267 10 36 467 1 413 5.38e-71 232
Msa0484410 AT5G14400.3 31.655 417 248 10 36 443 1 389 1.83e-68 224
Msa0484410 AT4G19230.1 28.894 443 300 7 31 472 36 464 4.04e-68 226
Msa0484410 AT3G30290.1 32.603 411 266 9 71 478 5 407 9.58e-68 223
Msa0484410 AT4G19230.2 30.024 413 275 6 31 443 36 434 2.18e-66 221
Msa0484410 AT5G38970.2 31.008 387 258 5 85 468 2 382 6.04e-65 215
Msa0484410 AT5G38970.4 31.008 387 258 5 85 468 2 382 6.04e-65 215
Msa0484410 AT5G05690.3 34.181 354 227 5 120 471 1 350 6.08e-65 214
Msa0484410 AT2G32440.2 28.571 455 307 9 1 442 9 458 2.33e-64 216
Msa0484410 AT2G32440.1 28.571 455 307 9 1 442 9 458 2.33e-64 216
Msa0484410 AT5G38970.3 29.953 424 280 8 3 421 5 416 2.39e-64 214
Msa0484410 AT2G29090.2 28.241 432 297 7 17 446 37 457 2.54e-64 216
Msa0484410 AT2G29090.1 28.241 432 297 7 17 446 37 457 2.54e-64 216
Msa0484410 AT3G44970.2 36.310 336 205 6 7 335 8 341 2.86e-63 210
Msa0484410 AT1G19630.1 28.635 447 310 6 3 446 9 449 2.17e-62 211
Msa0484410 AT1G19630.3 28.604 444 308 6 3 443 9 446 4.36e-61 206
Msa0484410 AT5G36110.1 28.910 422 289 7 31 446 34 450 5.26e-61 207
Msa0484410 AT1G05160.2 26.846 447 314 7 5 442 19 461 1.30e-58 201
Msa0484410 AT1G05160.1 26.846 447 314 7 5 442 19 461 1.30e-58 201
Msa0484410 AT2G42850.1 28.634 454 295 12 31 470 45 483 6.89e-56 194
Msa0484410 AT4G36380.2 31.858 339 225 3 31 364 69 406 5.38e-55 190
Msa0484410 AT5G14400.4 31.065 338 216 8 36 364 1 330 9.81e-52 178
Msa0484410 AT5G14400.1 29.016 386 237 10 91 467 2 359 5.85e-51 177
Msa0484410 AT1G19630.2 26.980 404 289 5 3 403 9 409 1.31e-49 176
Msa0484410 AT2G29090.3 26.575 365 261 5 84 446 3 362 2.60e-47 168
Msa0484410 AT5G36110.2 27.507 349 244 6 31 373 34 379 7.49e-41 151
Msa0484410 AT2G42850.2 26.966 356 235 9 31 373 45 388 2.40e-35 136
Msa0484410 AT2G29090.4 26.027 292 206 5 17 306 37 320 4.36e-31 123
Msa0484410 AT5G36140.1 26.056 284 199 6 31 308 33 311 3.25e-30 120
Msa0484410 AT4G13310.1 24.342 456 296 17 23 444 24 464 1.23e-22 101
Msa0484410 AT5G36130.1 33.333 138 88 2 332 467 1 136 5.22e-22 92.4
Msa0484410 AT5G06905.1 20.683 498 330 13 19 468 19 499 3.27e-21 97.1
Msa0484410 AT5G06900.1 24.421 475 304 20 3 442 12 466 1.19e-20 95.1
Msa0484410 AT4G37410.1 21.720 465 302 13 31 456 30 471 7.67e-20 92.8
Msa0484410 AT1G31800.1 20.824 437 297 11 67 469 139 560 9.23e-20 92.8
Msa0484410 AT4G13290.1 24.565 460 282 21 23 444 25 457 1.84e-19 91.7
Msa0484410 AT3G26310.1 26.482 253 165 6 222 457 233 481 3.72e-19 90.5
Msa0484410 AT4G37430.1 21.806 454 304 16 31 448 28 466 4.33e-19 90.5
Msa0484410 AT3G26300.1 20.482 498 319 16 1 451 4 471 5.63e-19 90.1
Msa0484410 AT2G45550.1 21.962 469 322 13 10 444 16 474 2.30e-18 88.2
Msa0484410 AT2G27000.1 21.628 430 288 15 60 451 64 482 2.62e-18 88.2
Msa0484410 AT5G04630.1 22.594 478 326 16 2 443 7 476 7.76e-18 86.7
Msa0484410 AT3G20110.1 23.415 410 285 12 66 451 70 474 1.10e-17 86.3
Msa0484410 AT4G12300.1 21.776 473 327 14 8 448 21 482 1.31e-17 85.9
Msa0484410 AT3G20140.1 21.681 452 310 14 31 451 42 480 2.09e-17 85.1
Msa0484410 AT5G44620.1 22.297 444 282 15 65 470 75 493 4.93e-17 84.0
Msa0484410 AT5G25140.1 21.413 453 304 12 31 448 29 464 5.11e-17 84.0
Msa0484410 AT5G57220.1 22.521 484 329 17 2 457 3 468 5.44e-17 84.0
Msa0484410 AT4G13770.1 22.222 477 327 19 1 444 1 466 7.13e-17 83.6
Msa0484410 AT5G24950.1 23.991 446 293 18 31 444 32 463 9.23e-17 83.2
Msa0484410 AT5G07990.1 22.314 484 327 17 1 449 4 473 1.01e-16 83.2
Msa0484410 AT5G25120.1 22.418 455 303 16 31 451 29 467 1.06e-16 83.2
Msa0484410 AT3G10560.1 22.128 470 327 16 4 443 20 480 1.42e-16 82.8
Msa0484410 AT5G25180.1 22.149 456 303 12 31 451 29 467 6.08e-16 80.5
Msa0484410 AT2G34500.1 22.811 434 279 15 75 473 78 490 6.17e-16 80.5
Msa0484410 AT3G20950.1 20.747 482 339 16 3 451 17 488 7.09e-16 80.5
Msa0484410 AT4G31500.1 22.271 458 301 16 30 448 28 469 1.39e-15 79.7
Msa0484410 AT1G66540.2 24.786 234 150 5 233 456 81 298 1.45e-15 78.2
Msa0484410 AT5G10610.1 23.465 456 312 16 26 455 27 471 2.26e-15 79.0
Msa0484410 AT4G37340.1 22.807 228 168 3 230 456 250 470 2.52e-15 78.6
Msa0484410 AT2G34490.1 21.495 428 290 17 75 470 79 492 2.74e-15 78.6
Msa0484410 AT4G15110.1 23.947 380 213 14 125 441 180 546 2.85e-15 79.0
Msa0484410 AT1G66540.1 24.786 234 150 5 233 456 140 357 3.46e-15 77.8
Msa0484410 AT4G37320.1 22.626 358 243 11 100 456 146 470 3.91e-15 78.2
Msa0484410 AT4G20240.1 25.505 396 259 13 30 400 32 416 6.08e-15 77.4
Msa0484410 AT3G48310.1 23.218 435 289 15 38 444 39 456 8.35e-15 77.0
Msa0484410 AT5G25130.1 26.500 200 136 4 259 451 272 467 9.45e-15 77.0
Msa0484410 AT3G28740.1 22.817 355 239 11 117 447 126 469 9.78e-15 77.0
Msa0484410 AT5G42590.1 23.494 498 323 19 4 465 9 484 1.15e-14 76.6
Msa0484410 AT1G50520.1 20.755 424 283 14 61 443 69 480 1.22e-14 76.6
Msa0484410 AT3G48280.1 22.022 445 301 16 29 444 28 455 1.50e-14 76.3
Msa0484410 AT3G20100.1 20.732 410 289 12 67 444 73 478 2.44e-14 75.9
Msa0484410 AT4G15380.1 21.163 430 270 12 61 444 68 474 3.87e-14 75.1
Msa0484410 AT4G15360.1 22.072 444 308 15 31 444 40 475 5.69e-14 74.7
Msa0484410 AT3G20940.1 20.309 453 320 14 31 451 42 485 6.98e-14 74.3
Msa0484410 AT3G53130.1 27.184 206 138 6 272 470 339 539 7.74e-14 74.3
Msa0484410 AT4G13310.2 24.011 379 242 15 23 370 24 387 8.17e-14 73.6
Msa0484410 AT4G15350.1 20.813 418 294 12 66 451 66 478 9.31e-14 73.9
Msa0484410 AT2G40890.1 21.298 493 330 16 3 457 8 480 1.21e-13 73.6
Msa0484410 AT5G24960.1 23.608 449 307 14 23 444 25 464 1.35e-13 73.2
Msa0484410 AT4G15330.1 20.675 474 333 16 9 451 17 478 1.41e-13 73.2
Msa0484410 AT5G10600.1 22.541 488 330 19 1 458 21 490 1.67e-13 73.2
Msa0484410 AT3G20130.1 20.913 416 294 13 60 444 67 478 1.78e-13 73.2
Msa0484410 AT2G45560.1 21.319 455 307 15 31 448 38 478 1.92e-13 72.8
Msa0484410 AT3G48270.1 22.197 437 301 17 33 444 33 455 1.97e-13 72.8
Msa0484410 AT3G26160.1 27.027 185 125 4 245 422 265 446 2.01e-13 72.8
Msa0484410 AT2G23180.1 26.442 208 142 5 272 470 307 512 5.59e-13 71.6
Msa0484410 AT5G04330.1 22.708 480 306 17 32 463 33 495 6.39e-13 71.2
Msa0484410 AT4G37330.1 20.058 344 234 9 106 446 152 457 6.85e-13 71.2
Msa0484410 AT1G33730.1 23.500 200 146 3 248 444 143 338 7.72e-13 70.5
Msa0484410 AT1G33730.2 23.500 200 146 3 248 444 143 338 7.72e-13 70.5
Msa0484410 AT2G27010.1 20.616 422 296 14 60 456 60 467 8.44e-13 70.9
Msa0484410 AT4G37400.1 21.378 421 297 14 65 457 60 474 9.53e-13 70.9
Msa0484410 AT3G48320.1 22.350 434 294 15 38 444 39 456 1.38e-12 70.1
Msa0484410 AT4G20240.2 25.405 370 241 12 30 375 32 390 1.59e-12 69.7
Msa0484410 AT5G36220.2 21.973 223 163 5 230 451 111 323 2.24e-12 68.9
Msa0484410 AT1G11680.1 21.239 452 319 13 8 437 15 451 2.28e-12 69.3
Msa0484410 AT1G13090.2 22.000 450 302 18 30 443 27 463 2.44e-12 69.3
Msa0484410 AT1G13110.1 19.835 484 343 13 3 451 4 477 2.74e-12 69.3
Msa0484410 AT5G24910.1 25.806 217 142 7 237 441 292 501 2.80e-12 69.3
Msa0484410 AT1G64900.1 21.212 462 313 15 38 459 38 488 3.09e-12 68.9
Msa0484410 AT2G25160.1 23.158 475 302 20 12 436 17 478 3.42e-12 68.9
Msa0484410 AT3G26330.1 25.098 255 168 8 222 458 234 483 3.48e-12 68.9
Msa0484410 AT1G28430.1 21.510 437 295 15 61 459 66 492 3.51e-12 68.9
Msa0484410 AT1G74550.1 21.412 425 283 13 67 457 58 465 5.04e-12 68.6
Msa0484410 AT5G38450.1 22.963 405 274 14 65 441 91 485 6.35e-12 68.2
Msa0484410 AT4G37360.1 24.390 246 174 5 220 462 242 478 6.86e-12 68.2
Msa0484410 AT2G45570.1 20.097 413 293 11 65 444 67 475 9.09e-12 67.8
Msa0484410 AT1G13100.1 27.451 204 128 6 246 433 261 460 1.10e-11 67.4
Msa0484410 AT1G24540.1 24.521 261 186 6 219 471 264 521 1.46e-11 67.0
Msa0484410 AT2G26710.1 22.943 401 264 15 67 441 103 484 1.68e-11 67.0
Msa0484410 AT4G22710.1 19.660 412 298 13 66 448 84 491 2.08e-11 66.6
Msa0484410 AT2G28860.1 18.632 424 303 14 75 470 79 488 3.17e-11 65.9
Msa0484410 AT3G20090.2 19.718 426 300 16 60 451 68 485 3.90e-11 65.9
Msa0484410 AT3G03470.1 21.489 470 323 15 30 459 30 493 3.91e-11 65.5
Msa0484410 AT4G31970.1 23.907 343 213 13 165 467 177 511 5.38e-11 65.1
Msa0484410 AT2G14100.1 19.855 413 298 12 61 444 69 477 5.43e-11 65.1
Msa0484410 AT3G25180.1 20.418 431 302 14 65 460 70 494 5.60e-11 65.1

Find 140 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCTTCCACTAGATTTA+AGG 0.122334 3_4:+1759524 Msa0484410:three_prime_UTR
CCGAGTCCTCCGAGAATTTA+AGG 0.150911 3_4:+1757648 Msa0484410:CDS
GATACATTCACAGAGATATT+TGG 0.163237 3_4:+1757287 Msa0484410:CDS
ATCAATGACATTTACATTTC+AGG 0.168011 3_4:+1758372 Msa0484410:CDS
ACCAAACATTTCCTGGCTTT+TGG 0.233382 3_4:+1759025 Msa0484410:CDS
ACTGAAGGCTCTCACCTAAA+AGG 0.242119 3_4:-1756841 None:intergenic
CTACCATGAGTCTTCCTTGC+AGG 0.258172 3_4:-1759380 None:intergenic
TTTGATCTTTCTCTGTGATC+TGG 0.305430 3_4:-1759313 None:intergenic
AACAATATTCCCTCCTTTGA+TGG 0.311079 3_4:-1759252 None:intergenic
AATATCTCTGTGAATGTATC+TGG 0.320683 3_4:-1757284 None:intergenic
AGTGCCTTCCGGAAGATTCC+TGG 0.327774 3_4:-1758520 None:intergenic
TTCATTCTCTTCTTGATGAA+TGG 0.341050 3_4:-1756896 None:intergenic
ATACATTCACAGAGATATTT+GGG 0.355848 3_4:+1757288 Msa0484410:CDS
AAATCCTTCTGTTGTTTCCT+AGG 0.357079 3_4:-1758007 None:intergenic
TGGTGCTACCAAACATTTCC+TGG 0.362057 3_4:+1759018 Msa0484410:CDS
AACATGATGCTCAATTTGTT+TGG 0.363635 3_4:+1757359 Msa0484410:CDS
ACCAAGTTTGTCTTGAAGAT+TGG 0.370600 3_4:-1757176 None:intergenic
ATAATACTACTAAAGGGAAA+TGG 0.374119 3_4:+1759548 Msa0484410:three_prime_UTR
ATTTGCAAGTCTCGCAGTTT+CGG 0.376972 3_4:-1758491 None:intergenic
TTACACGTTGGGTTTATAGA+TGG 0.377880 3_4:+1756768 Msa0484410:CDS
TGCTAAACGCACCTCCCATC+TGG 0.378101 3_4:-1758804 None:intergenic
TGCCATGTGACTCCAGAGTT+AGG 0.381381 3_4:-1758340 None:intergenic
AAAGTTCTCCCTTAAATTCT+CGG 0.385746 3_4:-1757657 None:intergenic
AGCTTATAACAAATGTTTGC+AGG 0.388693 3_4:+1757730 Msa0484410:CDS
CATTTGTTATAAGCTGTTCC+TGG 0.389618 3_4:-1757722 None:intergenic
TTTGAACCCTGCGAAATATC+AGG 0.389672 3_4:+1758760 Msa0484410:CDS
AATTGAGCATCATGTTCTTA+AGG 0.390570 3_4:-1757352 None:intergenic
CTGAAGGCTCTCACCTAAAA+GGG 0.394233 3_4:-1756840 None:intergenic
TCATTCCCTCTCAACATTCC+AGG 0.394399 3_4:+1757704 Msa0484410:CDS
GGGAATATTGTTCGAACTCC+TGG 0.399698 3_4:+1759263 Msa0484410:CDS
TAATTTCCCTTAGTGCCTTC+CGG 0.411050 3_4:-1758531 None:intergenic
CCTTAAATTCTCGGAGGACT+CGG 0.426734 3_4:-1757648 None:intergenic
CAAAATGTAGGTTCCTTACA+TGG 0.428064 3_4:+1757314 Msa0484410:CDS
AGACTTGCAAATATAGTTCC+AGG 0.431096 3_4:+1758502 Msa0484410:CDS
TTAAGGTATAATACTACTAA+AGG 0.431940 3_4:+1759541 Msa0484410:three_prime_UTR
ATATAGTTCCAGGAATCTTC+CGG 0.432579 3_4:+1758512 Msa0484410:CDS
ATTGTCAGAGAGTAATTTGA+TGG 0.434342 3_4:-1758155 None:intergenic
ATTGCTTGGTAACAAAGTAT+AGG 0.436931 3_4:+1759110 Msa0484410:CDS
TAATACTACTAAAGGGAAAT+GGG 0.437438 3_4:+1759549 Msa0484410:three_prime_UTR
GTAATTTGATGGCATAAGTA+AGG 0.438483 3_4:-1758144 None:intergenic
ACCAAAAGCCAGGAAATGTT+TGG 0.440923 3_4:-1759026 None:intergenic
TAACTACTTCATATTCCAAC+AGG 0.445863 3_4:+1757235 Msa0484410:CDS
TAGGATTCTCACGTCGTTCA+AGG 0.447412 3_4:-1758321 None:intergenic
CTTATACATAAAACCATGTA+AGG 0.447459 3_4:-1757327 None:intergenic
ATCTGGACATGAAAGCCATT+TGG 0.457418 3_4:-1759296 None:intergenic
TATGTGCATTATTACACGTT+GGG 0.458676 3_4:+1756757 Msa0484410:CDS
GCAGGGTTCAAATGTACAGC+TGG 0.459923 3_4:-1758749 None:intergenic
GAATCTTCCGGAAGGCACTA+AGG 0.466533 3_4:+1758524 Msa0484410:CDS
AAGCTTCGAAACCACTTCTC+AGG 0.466680 3_4:+1758120 Msa0484410:CDS
AATATGAAGTAGTTAAGATC+AGG 0.468099 3_4:-1757227 None:intergenic
CCTGGTTTACAATTTCCAAA+TGG 0.471815 3_4:+1759281 Msa0484410:CDS
CGAGTCCTCCGAGAATTTAA+GGG 0.477211 3_4:+1757649 Msa0484410:CDS
AGAGCATGCTGCAGGAAAGA+AGG 0.484392 3_4:+1757978 Msa0484410:CDS
AGGAATATCACAAGAAGTGT+TGG 0.485257 3_4:-1756873 None:intergenic
AGCCTGCAGAACATTACAAC+AGG 0.486587 3_4:+1757424 Msa0484410:CDS
ACCAGCAGGATGGGCAATCA+TGG 0.490842 3_4:+1758718 Msa0484410:CDS
GATTGCCCATCCTGCTGGTA+TGG 0.491364 3_4:-1758714 None:intergenic
CGCCTGTTGTAATGTTCTGC+AGG 0.492751 3_4:-1757426 None:intergenic
TAAGGTATAATACTACTAAA+GGG 0.493454 3_4:+1759542 Msa0484410:three_prime_UTR
ATTACAACAGGCGTCGTGTC+AGG 0.493459 3_4:+1757436 Msa0484410:CDS
AAACTACCACCAGGTACAAT+GGG 0.497164 3_4:+1756812 Msa0484410:CDS
ACAATATTCCCTCCTTTGAT+GGG 0.500084 3_4:-1759251 None:intergenic
GGGTCTGTGGACACTACAAC+TGG 0.501330 3_4:-1757206 None:intergenic
AACTTTGTTGCATTTATACA+AGG 0.506305 3_4:+1757674 Msa0484410:CDS
ACCATGATTGCCCATCCTGC+TGG 0.509227 3_4:-1758719 None:intergenic
TATTGAAGAACTTAGAAAAG+AGG 0.509615 3_4:+1758042 Msa0484410:CDS
CTAAAGGGAAATGGGCCAAG+GGG 0.516162 3_4:+1759557 Msa0484410:three_prime_UTR
AGAGGATCCTGATATTTCGC+AGG 0.516865 3_4:-1758767 None:intergenic
CCATTTGGAAATTGTAAACC+AGG 0.516872 3_4:-1759281 None:intergenic
GGAATATCACAAGAAGTGTT+GGG 0.519625 3_4:-1756872 None:intergenic
TCATGCCTCCACCAAAAGCC+AGG 0.525654 3_4:-1759036 None:intergenic
ACCAATCTTCAAGACAAACT+TGG 0.526479 3_4:+1757175 Msa0484410:CDS
ATTGAAGAACTTAGAAAAGA+GGG 0.526613 3_4:+1758043 Msa0484410:CDS
AAACGCACCTCCCATCTGGA+TGG 0.527002 3_4:-1758800 None:intergenic
AGAATTTGCCAAGGTTCAGA+TGG 0.528615 3_4:+1759075 Msa0484410:CDS
TCAGGACAGCGTCGAGCTGA+AGG 0.533043 3_4:+1757454 Msa0484410:CDS
CAGGGTTCAAATGTACAGCT+GGG 0.535877 3_4:-1758748 None:intergenic
AAATTCTCGGAGGACTCGGT+TGG 0.542724 3_4:-1757644 None:intergenic
TGTAATTGCTTGAACACCAA+GGG 0.542826 3_4:-1758178 None:intergenic
GATGCTTAAGAGCATGCTGC+AGG 0.543371 3_4:+1757970 Msa0484410:CDS
GGTAGTTTACCATTGCAACT+AGG 0.543466 3_4:-1756797 None:intergenic
CTTAACAGAAGCAATAGCTC+TGG 0.543914 3_4:+1758072 Msa0484410:CDS
ATTCTCTTCTTGATGAATGG+AGG 0.545192 3_4:-1756893 None:intergenic
ATCTTCAAGACAAACTTGGT+TGG 0.546380 3_4:+1757179 Msa0484410:CDS
ATGTATCTGGATACCAACTC+TGG 0.549088 3_4:-1757271 None:intergenic
GTATTATACCTTAAATCTAG+TGG 0.549370 3_4:-1759532 None:intergenic
TACTAAAGGGAAATGGGCCA+AGG 0.549494 3_4:+1759555 Msa0484410:three_prime_UTR
ATATTTGGGCAACAAAATGT+AGG 0.549555 3_4:+1757302 Msa0484410:CDS
AAGGGAAAATATTCCAGAGT+TGG 0.550551 3_4:+1757258 Msa0484410:CDS
TTGTCTTCAACCCATCCAGA+TGG 0.551692 3_4:+1758789 Msa0484410:CDS
ATATACCATACCAGCAGGAT+GGG 0.555489 3_4:+1758709 Msa0484410:CDS
TAAACTACCACCAGGTACAA+TGG 0.556385 3_4:+1756811 Msa0484410:CDS
GAGCATGCTGCAGGAAAGAA+GGG 0.558252 3_4:+1757979 Msa0484410:CDS
ATTACTCTCTGACAATCCCT+TGG 0.558657 3_4:+1758162 Msa0484410:CDS
TTTAAAGTAAGAGTCTGTTA+CGG 0.564023 3_4:-1759489 None:intergenic
ACTAAAGGGAAATGGGCCAA+GGG 0.565428 3_4:+1759556 Msa0484410:three_prime_UTR
ATTCTCACGTCGTTCAAGGA+TGG 0.565772 3_4:-1758317 None:intergenic
TTCAGGTGGCGACCCATCAA+AGG 0.566577 3_4:+1759239 Msa0484410:intron
AATCTTCCGGAAGGCACTAA+GGG 0.567870 3_4:+1758525 Msa0484410:CDS
TGGAGAAATCCTAGTTGCAA+TGG 0.573060 3_4:+1756788 Msa0484410:CDS
TCATCAAGAAGAGAATGAAA+AGG 0.575267 3_4:+1756900 Msa0484410:CDS
CGACGTGAGAATCCTAACTC+TGG 0.577850 3_4:+1758328 Msa0484410:CDS
TGTCTTCAACCCATCCAGAT+GGG 0.579182 3_4:+1758790 Msa0484410:CDS
GCTGAAGGAAGCAACAGAAA+CGG 0.582765 3_4:+1757469 Msa0484410:CDS
CTGTTCCTGGAATGTTGAGA+GGG 0.583184 3_4:-1757709 None:intergenic
AGGGGTAATCCCATTGTACC+TGG 0.583857 3_4:-1756821 None:intergenic
AACGCACCTCCCATCTGGAT+GGG 0.588199 3_4:-1758799 None:intergenic
GATATACCATACCAGCAGGA+TGG 0.594840 3_4:+1758708 Msa0484410:CDS
GTAGTTAAGATCAGGGTCTG+TGG 0.595135 3_4:-1757219 None:intergenic
TAATTTGATGGCATAAGTAA+GGG 0.595541 3_4:-1758143 None:intergenic
AAATGTTTGGTAGCACCACT+CGG 0.596149 3_4:-1759013 None:intergenic
AGGAAAGAAGGGAAATGCCT+AGG 0.597147 3_4:+1757990 Msa0484410:CDS
ATAAGTAAGGGCCTGAGAAG+TGG 0.597216 3_4:-1758131 None:intergenic
CTGGATGGGTTGAAGACAAG+AGG 0.599247 3_4:-1758785 None:intergenic
GCAGGATATACCATACCAGC+AGG 0.600527 3_4:+1758704 Msa0484410:intron
AGGTGGCGACCCATCAAAGG+AGG 0.605955 3_4:+1759242 Msa0484410:intron
GAGGATCCTGATATTTCGCA+GGG 0.613931 3_4:-1758766 None:intergenic
TGTTGGGACAGAATTTGCCA+AGG 0.619174 3_4:+1759066 Msa0484410:CDS
GCTGTTCCTGGAATGTTGAG+AGG 0.622568 3_4:-1757710 None:intergenic
TACTTCATATTCCAACAGGA+AGG 0.624124 3_4:+1757239 Msa0484410:CDS
ACTTCATATTCCAACAGGAA+GGG 0.625650 3_4:+1757240 Msa0484410:CDS
ATATGAAGTAGTTAAGATCA+GGG 0.631648 3_4:-1757226 None:intergenic
AGGGTTCAAATGTACAGCTG+GGG 0.636970 3_4:-1758747 None:intergenic
AAACCTGCAAGGAAGACTCA+TGG 0.642169 3_4:+1759377 Msa0484410:three_prime_UTR
CTATGTGCATTATTACACGT+TGG 0.643076 3_4:+1756756 Msa0484410:CDS
TAAAGGGAAATGGGCCAAGG+GGG 0.644404 3_4:+1759558 Msa0484410:three_prime_UTR
GGGTTCAAATGTACAGCTGG+GGG 0.646158 3_4:-1758746 None:intergenic
TTGTAATTGCTTGAACACCA+AGG 0.648842 3_4:-1758179 None:intergenic
TGCAATGGTAAACTACCACC+AGG 0.650281 3_4:+1756803 Msa0484410:CDS
ATTAGAACACAAAACCTGCA+AGG 0.652462 3_4:+1759366 Msa0484410:exon
CAAAGAGAAGCACAAACATG+AGG 0.652872 3_4:-1758096 None:intergenic
TGAAGGCTCTCACCTAAAAG+GGG 0.655464 3_4:-1756839 None:intergenic
ATCCTAACTCTGGAGTCACA+TGG 0.660807 3_4:+1758338 Msa0484410:CDS
AATGCCTAGGAAACAACAGA+AGG 0.670450 3_4:+1758003 Msa0484410:CDS
GGTGGCGACCCATCAAAGGA+GGG 0.671094 3_4:+1759243 Msa0484410:intron
AGTTCCAGGAATCTTCCGGA+AGG 0.672126 3_4:+1758516 Msa0484410:CDS
CTTCAACCCATCCAGATGGG+AGG 0.674277 3_4:+1758793 Msa0484410:CDS
GTTCTCCCTTAAATTCTCGG+AGG 0.689554 3_4:-1757654 None:intergenic
GGTAATCCCATTGTACCTGG+TGG 0.706713 3_4:-1756818 None:intergenic
CTACAGGGAATGGAACCGAG+TGG 0.755309 3_4:+1758998 Msa0484410:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTACAAATATATTATTATA+TGG + chr3_4:1758206-1758225 Msa0484410:intron 10.0%
!! AATTATAAAAATTAGTACAC+TGG + chr3_4:1757798-1757817 Msa0484410:intron 15.0%
!!! TCTTTTGAACTATTTTTTTA+TGG + chr3_4:1758237-1758256 Msa0484410:intron 15.0%
!!! AAATTTCTTCATTTTTAATG+TGG + chr3_4:1758404-1758423 Msa0484410:intron 15.0%
!!! AATTTCTTCATTTTTAATGT+GGG + chr3_4:1758405-1758424 Msa0484410:intron 15.0%
!!! TAATAATATCACAGTTTGTT+CGG + chr3_4:1756988-1757007 Msa0484410:intron 20.0%
!! CAAAAACAAAAGGAATAATA+TGG + chr3_4:1757123-1757142 Msa0484410:intron 20.0%
!! TGATTATATATAGGAAAGAA+AGG - chr3_4:1757577-1757596 None:intergenic 20.0%
!! TCATCTGAATGATTATATAT+AGG - chr3_4:1757586-1757605 None:intergenic 20.0%
!!! AGGTAAGCATTTTATTAATA+AGG + chr3_4:1757750-1757769 Msa0484410:intron 20.0%
!!! GGTAAGCATTTTATTAATAA+GGG + chr3_4:1757751-1757770 Msa0484410:intron 20.0%
!!! AACTATTTTTTTATGGCTTT+AGG + chr3_4:1758244-1758263 Msa0484410:intron 20.0%
!!! ACTAAGGGAAATTAATTTTA+AGG + chr3_4:1758540-1758559 Msa0484410:CDS 20.0%
!!! CTAAGGGAAATTAATTTTAA+GGG + chr3_4:1758541-1758560 Msa0484410:CDS 20.0%
!! ATCACAAAATTGTAAAAGAA+GGG - chr3_4:1758963-1758982 None:intergenic 20.0%
!! TTAAGGTATAATACTACTAA+AGG + chr3_4:1759541-1759560 Msa0484410:three_prime_UTR 20.0%
!! TAAGGTATAATACTACTAAA+GGG + chr3_4:1759542-1759561 Msa0484410:three_prime_UTR 20.0%
!! AATAATATCACAGTTTGTTC+GGG + chr3_4:1756989-1757008 Msa0484410:intron 25.0%
! GATAACTTGAGTTCAAATTA+TGG + chr3_4:1757011-1757030 Msa0484410:intron 25.0%
! ATATGAAGTAGTTAAGATCA+GGG - chr3_4:1757229-1757248 None:intergenic 25.0%
! AATATGAAGTAGTTAAGATC+AGG - chr3_4:1757230-1757249 None:intergenic 25.0%
! ATACATTCACAGAGATATTT+GGG + chr3_4:1757288-1757307 Msa0484410:CDS 25.0%
! CTTATACATAAAACCATGTA+AGG - chr3_4:1757330-1757349 None:intergenic 25.0%
!!! ATCATCTTTTTAAGACTTTC+AGG - chr3_4:1757386-1757405 None:intergenic 25.0%
! AACTTTGTTGCATTTATACA+AGG + chr3_4:1757674-1757693 Msa0484410:CDS 25.0%
! ATAAAAATTAGTACACTGGT+TGG + chr3_4:1757802-1757821 Msa0484410:intron 25.0%
!!! ACAGCAAAATTAACTTGTTT+TGG + chr3_4:1757919-1757938 Msa0484410:intron 25.0%
! TATTGAAGAACTTAGAAAAG+AGG + chr3_4:1758042-1758061 Msa0484410:CDS 25.0%
! ATTGAAGAACTTAGAAAAGA+GGG + chr3_4:1758043-1758062 Msa0484410:CDS 25.0%
!! TAATTTGATGGCATAAGTAA+GGG - chr3_4:1758146-1758165 None:intergenic 25.0%
! ATCAATGACATTTACATTTC+AGG + chr3_4:1758372-1758391 Msa0484410:CDS 25.0%
! ACTTGATGTTTAAGTAATAG+TGG + chr3_4:1758625-1758644 Msa0484410:intron 25.0%
! TCATTATTGTAGACAAAATG+AGG - chr3_4:1758678-1758697 None:intergenic 25.0%
! GATCACAAAATTGTAAAAGA+AGG - chr3_4:1758964-1758983 None:intergenic 25.0%
!! TTTTGTGATCCAAAAAGAAA+TGG + chr3_4:1758974-1758993 Msa0484410:intron 25.0%
! CTTTAACGTTTGAATATTTC+AGG + chr3_4:1759222-1759241 Msa0484410:intron 25.0%
!! TTTAAAGTAAGAGTCTGTTA+CGG - chr3_4:1759492-1759511 None:intergenic 25.0%
! GTATTATACCTTAAATCTAG+TGG - chr3_4:1759535-1759554 None:intergenic 25.0%
! ATAATACTACTAAAGGGAAA+TGG + chr3_4:1759548-1759567 Msa0484410:three_prime_UTR 25.0%
! TAATACTACTAAAGGGAAAT+GGG + chr3_4:1759549-1759568 Msa0484410:three_prime_UTR 25.0%
TATGTGCATTATTACACGTT+GGG + chr3_4:1756757-1756776 Msa0484410:CDS 30.0%
TTCATTCTCTTCTTGATGAA+TGG - chr3_4:1756899-1756918 None:intergenic 30.0%
TCATCAAGAAGAGAATGAAA+AGG + chr3_4:1756900-1756919 Msa0484410:CDS 30.0%
! TTGTTGTCTCTTTTCAGATA+TGG + chr3_4:1757152-1757171 Msa0484410:intron 30.0%
TAACTACTTCATATTCCAAC+AGG + chr3_4:1757235-1757254 Msa0484410:CDS 30.0%
AATATCTCTGTGAATGTATC+TGG - chr3_4:1757287-1757306 None:intergenic 30.0%
GATACATTCACAGAGATATT+TGG + chr3_4:1757287-1757306 Msa0484410:CDS 30.0%
ATATTTGGGCAACAAAATGT+AGG + chr3_4:1757302-1757321 Msa0484410:CDS 30.0%
AATTGAGCATCATGTTCTTA+AGG - chr3_4:1757355-1757374 None:intergenic 30.0%
! AACATGATGCTCAATTTGTT+TGG + chr3_4:1757359-1757378 Msa0484410:CDS 30.0%
TCTTAAAAAGATGATCTCAG+AGG + chr3_4:1757391-1757410 Msa0484410:CDS 30.0%
GAAGAAGGTTAAAATAGTAG+AGG - chr3_4:1757532-1757551 None:intergenic 30.0%
TTTAGACTTTAGACAAGGAA+TGG - chr3_4:1757554-1757573 None:intergenic 30.0%
AAAGGTTTAGACTTTAGACA+AGG - chr3_4:1757559-1757578 None:intergenic 30.0%
AAAGTTCTCCCTTAAATTCT+CGG - chr3_4:1757660-1757679 None:intergenic 30.0%
AGCTTATAACAAATGTTTGC+AGG + chr3_4:1757730-1757749 Msa0484410:CDS 30.0%
! GTAATTTGATGGCATAAGTA+AGG - chr3_4:1758147-1758166 None:intergenic 30.0%
ATTGTCAGAGAGTAATTTGA+TGG - chr3_4:1758158-1758177 None:intergenic 30.0%
GAAAAGATGGAAAGAAAATG+AGG - chr3_4:1758838-1758857 None:intergenic 30.0%
! ATTGCTTGGTAACAAAGTAT+AGG + chr3_4:1759110-1759129 Msa0484410:CDS 30.0%
GTAATAAGCAATGTAATGCA+TGG + chr3_4:1759132-1759151 Msa0484410:intron 30.0%
TTAAATTCAGGCGTTAAAGA+AGG - chr3_4:1759185-1759204 None:intergenic 30.0%
ACGCATTCTGAATTAAATTC+AGG - chr3_4:1759197-1759216 None:intergenic 30.0%
TAACGTTTGAATATTTCAGG+TGG + chr3_4:1759225-1759244 Msa0484410:intron 30.0%
CTATGTGCATTATTACACGT+TGG + chr3_4:1756756-1756775 Msa0484410:CDS 35.0%
TTACACGTTGGGTTTATAGA+TGG + chr3_4:1756768-1756787 Msa0484410:CDS 35.0%
TGTTGGGAGAAAAAAACTGA+AGG - chr3_4:1756859-1756878 None:intergenic 35.0%
!! GGAATATCACAAGAAGTGTT+GGG - chr3_4:1756875-1756894 None:intergenic 35.0%
! AGGAATATCACAAGAAGTGT+TGG - chr3_4:1756876-1756895 None:intergenic 35.0%
ATTCTCTTCTTGATGAATGG+AGG - chr3_4:1756896-1756915 None:intergenic 35.0%
TGGGCTAAGACAAAAACAAA+AGG + chr3_4:1757113-1757132 Msa0484410:intron 35.0%
ACCAATCTTCAAGACAAACT+TGG + chr3_4:1757175-1757194 Msa0484410:CDS 35.0%
ACCAAGTTTGTCTTGAAGAT+TGG - chr3_4:1757179-1757198 None:intergenic 35.0%
ATCTTCAAGACAAACTTGGT+TGG + chr3_4:1757179-1757198 Msa0484410:CDS 35.0%
TACTTCATATTCCAACAGGA+AGG + chr3_4:1757239-1757258 Msa0484410:CDS 35.0%
ACTTCATATTCCAACAGGAA+GGG + chr3_4:1757240-1757259 Msa0484410:CDS 35.0%
AAGGGAAAATATTCCAGAGT+TGG + chr3_4:1757258-1757277 Msa0484410:CDS 35.0%
CAAAATGTAGGTTCCTTACA+TGG + chr3_4:1757314-1757333 Msa0484410:CDS 35.0%
TTTAGACAAGGAATGGAAGA+AGG - chr3_4:1757547-1757566 None:intergenic 35.0%
!! CATTTGTTATAAGCTGTTCC+TGG - chr3_4:1757725-1757744 None:intergenic 35.0%
!!! TTAACTTGTTTTGGCTTCTC+AGG + chr3_4:1757928-1757947 Msa0484410:intron 35.0%
!!! TAACTTGTTTTGGCTTCTCA+GGG + chr3_4:1757929-1757948 Msa0484410:intron 35.0%
!! AAATCCTTCTGTTGTTTCCT+AGG - chr3_4:1758010-1758029 None:intergenic 35.0%
TGTAATTGCTTGAACACCAA+GGG - chr3_4:1758181-1758200 None:intergenic 35.0%
TTGTAATTGCTTGAACACCA+AGG - chr3_4:1758182-1758201 None:intergenic 35.0%
!!! GATGTCAATTTTGACTTCCT+CGG + chr3_4:1758266-1758285 Msa0484410:intron 35.0%
CATGTTCTTCCTAAAAGACA+AGG - chr3_4:1758294-1758313 None:intergenic 35.0%
AGACTTGCAAATATAGTTCC+AGG + chr3_4:1758502-1758521 Msa0484410:CDS 35.0%
ATATAGTTCCAGGAATCTTC+CGG + chr3_4:1758512-1758531 Msa0484410:CDS 35.0%
GTTTCAATGTTCAAGTGCAT+TGG + chr3_4:1758600-1758619 Msa0484410:intron 35.0%
!! AGCAACTAGCTTTGAAAAGA+TGG - chr3_4:1758851-1758870 None:intergenic 35.0%
TCCAAAAAGAAATGGTCTAC+AGG + chr3_4:1758982-1759001 Msa0484410:intron 35.0%
CCAAAAAGAAATGGTCTACA+GGG + chr3_4:1758983-1759002 Msa0484410:intron 35.0%
ACAATATTCCCTCCTTTGAT+GGG - chr3_4:1759254-1759273 None:intergenic 35.0%
AACAATATTCCCTCCTTTGA+TGG - chr3_4:1759255-1759274 None:intergenic 35.0%
CCATTTGGAAATTGTAAACC+AGG - chr3_4:1759284-1759303 None:intergenic 35.0%
CCTGGTTTACAATTTCCAAA+TGG + chr3_4:1759281-1759300 Msa0484410:CDS 35.0%
TTTGATCTTTCTCTGTGATC+TGG - chr3_4:1759316-1759335 None:intergenic 35.0%
ATTAGAACACAAAACCTGCA+AGG + chr3_4:1759366-1759385 Msa0484410:exon 35.0%
TGGAGAAATCCTAGTTGCAA+TGG + chr3_4:1756788-1756807 Msa0484410:CDS 40.0%
GGTAGTTTACCATTGCAACT+AGG - chr3_4:1756800-1756819 None:intergenic 40.0%
TAAACTACCACCAGGTACAA+TGG + chr3_4:1756811-1756830 Msa0484410:CDS 40.0%
AAACTACCACCAGGTACAAT+GGG + chr3_4:1756812-1756831 Msa0484410:CDS 40.0%
! ACAATGGGATTACCCCTTTT+AGG + chr3_4:1756827-1756846 Msa0484410:CDS 40.0%
ATTATGGCTGAAGCAATCCT+TGG + chr3_4:1757027-1757046 Msa0484410:intron 40.0%
GCCAGACTTTACTTACCTTT+CGG + chr3_4:1757049-1757068 Msa0484410:intron 40.0%
!!! TTGTTTTTGTCTTAGCCCAC+CGG - chr3_4:1757112-1757131 None:intergenic 40.0%
! GGAATATTTTCCCTTCCTGT+TGG - chr3_4:1757253-1757272 None:intergenic 40.0%
ATGTATCTGGATACCAACTC+TGG - chr3_4:1757274-1757293 None:intergenic 40.0%
!!! GTTGGTTTTCTCAAGAAGTG+TGG + chr3_4:1757820-1757839 Msa0484410:intron 40.0%
AATGCCTAGGAAACAACAGA+AGG + chr3_4:1758003-1758022 Msa0484410:CDS 40.0%
CTTAACAGAAGCAATAGCTC+TGG + chr3_4:1758072-1758091 Msa0484410:CDS 40.0%
! CAAAGAGAAGCACAAACATG+AGG - chr3_4:1758099-1758118 None:intergenic 40.0%
ATTACTCTCTGACAATCCCT+TGG + chr3_4:1758162-1758181 Msa0484410:CDS 40.0%
ATTTGCAAGTCTCGCAGTTT+CGG - chr3_4:1758494-1758513 None:intergenic 40.0%
TAATTTCCCTTAGTGCCTTC+CGG - chr3_4:1758534-1758553 None:intergenic 40.0%
CTACAATAATGAACACGTGC+AGG + chr3_4:1758686-1758705 Msa0484410:intron 40.0%
ATATACCATACCAGCAGGAT+GGG + chr3_4:1758709-1758728 Msa0484410:CDS 40.0%
TTTGAACCCTGCGAAATATC+AGG + chr3_4:1758760-1758779 Msa0484410:CDS 40.0%
! CCCTGTAGACCATTTCTTTT+TGG - chr3_4:1758986-1759005 None:intergenic 40.0%
AAGAAATGGTCTACAGGGAA+TGG + chr3_4:1758988-1759007 Msa0484410:intron 40.0%
! AAATGTTTGGTAGCACCACT+CGG - chr3_4:1759016-1759035 None:intergenic 40.0%
!! ACCAAACATTTCCTGGCTTT+TGG + chr3_4:1759025-1759044 Msa0484410:CDS 40.0%
ACCAAAAGCCAGGAAATGTT+TGG - chr3_4:1759029-1759048 None:intergenic 40.0%
!! AAACATTTCCTGGCTTTTGG+TGG + chr3_4:1759028-1759047 Msa0484410:CDS 40.0%
! GAGGCATGAGATTTTGTGTT+GGG + chr3_4:1759050-1759069 Msa0484410:CDS 40.0%
AGAATTTGCCAAGGTTCAGA+TGG + chr3_4:1759075-1759094 Msa0484410:CDS 40.0%
AAAAACTGCCATCTGAACCT+TGG - chr3_4:1759086-1759105 None:intergenic 40.0%
! GGCAGTTTTTCTTCATTGCT+TGG + chr3_4:1759096-1759115 Msa0484410:CDS 40.0%
ATCTGGACATGAAAGCCATT+TGG - chr3_4:1759299-1759318 None:intergenic 40.0%
!!! GTCTGTTACGGTTACTTTTG+AGG - chr3_4:1759480-1759499 None:intergenic 40.0%
CTGTGCTTCCACTAGATTTA+AGG + chr3_4:1759524-1759543 Msa0484410:three_prime_UTR 40.0%
!! GGTTTTGTGTCTAGGAGCAT+TGG + chr3_4:1756730-1756749 Msa0484410:CDS 45.0%
TGCAATGGTAAACTACCACC+AGG + chr3_4:1756803-1756822 Msa0484410:CDS 45.0%
TGAAGGCTCTCACCTAAAAG+GGG - chr3_4:1756842-1756861 None:intergenic 45.0%
CTGAAGGCTCTCACCTAAAA+GGG - chr3_4:1756843-1756862 None:intergenic 45.0%
ACTGAAGGCTCTCACCTAAA+AGG - chr3_4:1756844-1756863 None:intergenic 45.0%
AGGTAAGTAAAGTCTGGCCA+AGG - chr3_4:1757047-1757066 None:intergenic 45.0%
GCCGAAAGGTAAGTAAAGTC+TGG - chr3_4:1757053-1757072 None:intergenic 45.0%
TAATCCAAAGTTCGGCCGAA+AGG - chr3_4:1757067-1757086 None:intergenic 45.0%
GTAGTTAAGATCAGGGTCTG+TGG - chr3_4:1757222-1757241 None:intergenic 45.0%
AGCCTGCAGAACATTACAAC+AGG + chr3_4:1757424-1757443 Msa0484410:CDS 45.0%
GCTGAAGGAAGCAACAGAAA+CGG + chr3_4:1757469-1757488 Msa0484410:CDS 45.0%
CCTTAAATTCTCGGAGGACT+CGG - chr3_4:1757651-1757670 None:intergenic 45.0%
CGAGTCCTCCGAGAATTTAA+GGG + chr3_4:1757649-1757668 Msa0484410:CDS 45.0%
GTTCTCCCTTAAATTCTCGG+AGG - chr3_4:1757657-1757676 None:intergenic 45.0%
TCATTCCCTCTCAACATTCC+AGG + chr3_4:1757704-1757723 Msa0484410:CDS 45.0%
CTGTTCCTGGAATGTTGAGA+GGG - chr3_4:1757712-1757731 None:intergenic 45.0%
AGGAAAGAAGGGAAATGCCT+AGG + chr3_4:1757990-1758009 Msa0484410:CDS 45.0%
AAGCTTCGAAACCACTTCTC+AGG + chr3_4:1758120-1758139 Msa0484410:CDS 45.0%
ATAAGTAAGGGCCTGAGAAG+TGG - chr3_4:1758134-1758153 None:intergenic 45.0%
! TCCTCGGTACCTTGTCTTTT+AGG + chr3_4:1758282-1758301 Msa0484410:intron 45.0%
!! TCCTAAAAGACAAGGTACCG+AGG - chr3_4:1758286-1758305 None:intergenic 45.0%
ATTCTCACGTCGTTCAAGGA+TGG - chr3_4:1758320-1758339 None:intergenic 45.0%
TAGGATTCTCACGTCGTTCA+AGG - chr3_4:1758324-1758343 None:intergenic 45.0%
!! ATCCTAACTCTGGAGTCACA+TGG + chr3_4:1758338-1758357 Msa0484410:CDS 45.0%
!! AATCTTCCGGAAGGCACTAA+GGG + chr3_4:1758525-1758544 Msa0484410:CDS 45.0%
GATATACCATACCAGCAGGA+TGG + chr3_4:1758708-1758727 Msa0484410:CDS 45.0%
AGGGTTCAAATGTACAGCTG+GGG - chr3_4:1758750-1758769 None:intergenic 45.0%
CAGGGTTCAAATGTACAGCT+GGG - chr3_4:1758751-1758770 None:intergenic 45.0%
GAGGATCCTGATATTTCGCA+GGG - chr3_4:1758769-1758788 None:intergenic 45.0%
AGAGGATCCTGATATTTCGC+AGG - chr3_4:1758770-1758789 None:intergenic 45.0%
TTGTCTTCAACCCATCCAGA+TGG + chr3_4:1758789-1758808 Msa0484410:CDS 45.0%
TGTCTTCAACCCATCCAGAT+GGG + chr3_4:1758790-1758809 Msa0484410:CDS 45.0%
!! TGGTGCTACCAAACATTTCC+TGG + chr3_4:1759018-1759037 Msa0484410:CDS 45.0%
!! GGAGGCATGAGATTTTGTGT+TGG + chr3_4:1759049-1759068 Msa0484410:CDS 45.0%
TGTTGGGACAGAATTTGCCA+AGG + chr3_4:1759066-1759085 Msa0484410:CDS 45.0%
GGGAATATTGTTCGAACTCC+TGG + chr3_4:1759263-1759282 Msa0484410:CDS 45.0%
AAACCTGCAAGGAAGACTCA+TGG + chr3_4:1759377-1759396 Msa0484410:three_prime_UTR 45.0%
TACTAAAGGGAAATGGGCCA+AGG + chr3_4:1759555-1759574 Msa0484410:three_prime_UTR 45.0%
ACTAAAGGGAAATGGGCCAA+GGG + chr3_4:1759556-1759575 Msa0484410:three_prime_UTR 45.0%
GGTAATCCCATTGTACCTGG+TGG - chr3_4:1756821-1756840 None:intergenic 50.0%
AGGGGTAATCCCATTGTACC+TGG - chr3_4:1756824-1756843 None:intergenic 50.0%
CTTACCTTTCGGCCGAACTT+TGG + chr3_4:1757060-1757079 Msa0484410:intron 50.0%
GGCCGAACTTTGGATTACCA+GGG + chr3_4:1757070-1757089 Msa0484410:intron 50.0%
GGCCCTGGTAATCCAAAGTT+CGG - chr3_4:1757075-1757094 None:intergenic 50.0%
CGCCTGTTGTAATGTTCTGC+AGG - chr3_4:1757429-1757448 None:intergenic 50.0%
! ATTACAACAGGCGTCGTGTC+AGG + chr3_4:1757436-1757455 Msa0484410:CDS 50.0%
! AAATTCTCGGAGGACTCGGT+TGG - chr3_4:1757647-1757666 None:intergenic 50.0%
CCGAGTCCTCCGAGAATTTA+AGG + chr3_4:1757648-1757667 Msa0484410:CDS 50.0%
GCTGTTCCTGGAATGTTGAG+AGG - chr3_4:1757713-1757732 None:intergenic 50.0%
! GATGCTTAAGAGCATGCTGC+AGG + chr3_4:1757970-1757989 Msa0484410:CDS 50.0%
AGAGCATGCTGCAGGAAAGA+AGG + chr3_4:1757978-1757997 Msa0484410:CDS 50.0%
GAGCATGCTGCAGGAAAGAA+GGG + chr3_4:1757979-1757998 Msa0484410:CDS 50.0%
CGACGTGAGAATCCTAACTC+TGG + chr3_4:1758328-1758347 Msa0484410:CDS 50.0%
TGCCATGTGACTCCAGAGTT+AGG - chr3_4:1758343-1758362 None:intergenic 50.0%
AGTTCCAGGAATCTTCCGGA+AGG + chr3_4:1758516-1758535 Msa0484410:CDS 50.0%
!! GAATCTTCCGGAAGGCACTA+AGG + chr3_4:1758524-1758543 Msa0484410:CDS 50.0%
GCAGGATATACCATACCAGC+AGG + chr3_4:1758704-1758723 Msa0484410:intron 50.0%
GGGTTCAAATGTACAGCTGG+GGG - chr3_4:1758749-1758768 None:intergenic 50.0%
GCAGGGTTCAAATGTACAGC+TGG - chr3_4:1758752-1758771 None:intergenic 50.0%
!! CTGGATGGGTTGAAGACAAG+AGG - chr3_4:1758788-1758807 None:intergenic 50.0%
!! CATTTCCTGGCTTTTGGTGG+AGG + chr3_4:1759031-1759050 Msa0484410:CDS 50.0%
CTACCATGAGTCTTCCTTGC+AGG - chr3_4:1759383-1759402 None:intergenic 50.0%
CTAAAGGGAAATGGGCCAAG+GGG + chr3_4:1759557-1759576 Msa0484410:three_prime_UTR 50.0%
TAAAGGGAAATGGGCCAAGG+GGG + chr3_4:1759558-1759577 Msa0484410:three_prime_UTR 50.0%
CGGCCGAACTTTGGATTACC+AGG + chr3_4:1757069-1757088 Msa0484410:intron 55.0%
TTACCAGGGCCTCATTCTCC+TGG + chr3_4:1757084-1757103 Msa0484410:intron 55.0%
CTCATTCTCCTGGAACCGGT+GGG + chr3_4:1757094-1757113 Msa0484410:intron 55.0%
GGGTCTGTGGACACTACAAC+TGG - chr3_4:1757209-1757228 None:intergenic 55.0%
AGTGCCTTCCGGAAGATTCC+TGG - chr3_4:1758523-1758542 None:intergenic 55.0%
GATTGCCCATCCTGCTGGTA+TGG - chr3_4:1758717-1758736 None:intergenic 55.0%
ACCAGCAGGATGGGCAATCA+TGG + chr3_4:1758718-1758737 Msa0484410:CDS 55.0%
ACCATGATTGCCCATCCTGC+TGG - chr3_4:1758722-1758741 None:intergenic 55.0%
CTTCAACCCATCCAGATGGG+AGG + chr3_4:1758793-1758812 Msa0484410:CDS 55.0%
AACGCACCTCCCATCTGGAT+GGG - chr3_4:1758802-1758821 None:intergenic 55.0%
AAACGCACCTCCCATCTGGA+TGG - chr3_4:1758803-1758822 None:intergenic 55.0%
TGCTAAACGCACCTCCCATC+TGG - chr3_4:1758807-1758826 None:intergenic 55.0%
CTACAGGGAATGGAACCGAG+TGG + chr3_4:1758998-1759017 Msa0484410:intron 55.0%
TCATGCCTCCACCAAAAGCC+AGG - chr3_4:1759039-1759058 None:intergenic 55.0%
TTCAGGTGGCGACCCATCAA+AGG + chr3_4:1759239-1759258 Msa0484410:intron 55.0%
GTTCCAGGAGAATGAGGCCC+TGG - chr3_4:1757090-1757109 None:intergenic 60.0%
GGGCCTCATTCTCCTGGAAC+CGG + chr3_4:1757090-1757109 Msa0484410:intron 60.0%
!! CCACCGGTTCCAGGAGAATG+AGG - chr3_4:1757096-1757115 None:intergenic 60.0%
CCTCATTCTCCTGGAACCGG+TGG + chr3_4:1757093-1757112 Msa0484410:intron 60.0%
!! TGTCTTAGCCCACCGGTTCC+AGG - chr3_4:1757105-1757124 None:intergenic 60.0%
! TCAGGACAGCGTCGAGCTGA+AGG + chr3_4:1757454-1757473 Msa0484410:CDS 60.0%
AGGTGGCGACCCATCAAAGG+AGG + chr3_4:1759242-1759261 Msa0484410:intron 60.0%
GGTGGCGACCCATCAAAGGA+GGG + chr3_4:1759243-1759262 Msa0484410:intron 60.0%
AATGGGCCAAGGGGGAAGTG+AGG + chr3_4:1759566-1759585 Msa0484410:three_prime_UTR 60.0%
ATGGGCCAAGGGGGAAGTGA+GGG + chr3_4:1759567-1759586 Msa0484410:three_prime_UTR 60.0%
TACCACCCTCACTTCCCCCT+TGG - chr3_4:1759575-1759594 None:intergenic 60.0%
GGCCAAGGGGGAAGTGAGGG+TGG + chr3_4:1759570-1759589 Msa0484410:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 1756725 1759612 1756725 ID=Msa0484410;Name=Msa0484410
chr3_4 mRNA 1756725 1759612 1756725 ID=Msa0484410-mRNA-1;Parent=Msa0484410;Name=Msa0484410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.25|0.22|1|1|1|9|242|483
chr3_4 exon 1756725 1756921 1756725 ID=Msa0484410-mRNA-1:exon:499;Parent=Msa0484410-mRNA-1
chr3_4 exon 1757169 1757490 1757169 ID=Msa0484410-mRNA-1:exon:500;Parent=Msa0484410-mRNA-1
chr3_4 exon 1757602 1757751 1757602 ID=Msa0484410-mRNA-1:exon:501;Parent=Msa0484410-mRNA-1
chr3_4 exon 1757950 1758201 1757950 ID=Msa0484410-mRNA-1:exon:502;Parent=Msa0484410-mRNA-1
chr3_4 exon 1758304 1758393 1758304 ID=Msa0484410-mRNA-1:exon:503;Parent=Msa0484410-mRNA-1
chr3_4 exon 1758484 1758562 1758484 ID=Msa0484410-mRNA-1:exon:504;Parent=Msa0484410-mRNA-1
chr3_4 exon 1758708 1758814 1758708 ID=Msa0484410-mRNA-1:exon:505;Parent=Msa0484410-mRNA-1
chr3_4 exon 1759004 1759131 1759004 ID=Msa0484410-mRNA-1:exon:506;Parent=Msa0484410-mRNA-1
chr3_4 exon 1759244 1759612 1759244 ID=Msa0484410-mRNA-1:exon:507;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1756725 1756921 1756725 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1757169 1757490 1757169 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1757602 1757751 1757602 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1757950 1758201 1757950 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1758304 1758393 1758304 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1758484 1758562 1758484 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1758708 1758814 1758708 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1759004 1759131 1759004 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 CDS 1759244 1759370 1759244 ID=Msa0484410-mRNA-1:cds;Parent=Msa0484410-mRNA-1
chr3_4 three_prime_UTR 1759371 1759612 1759371 ID=Msa0484410-mRNA-1:three_prime_utr;Parent=Msa0484410-mRNA-1
Gene Sequence

>Msa0484410

ATGTGGGTTTTGTGTCTAGGAGCATTGGTTACTATGTGCATTATTACACGTTGGGTTTATAGATGGAGAAATCCTAGTTGCAATGGTAAACTACCACCAGGTACAATGGGATTACCCCTTTTAGGTGAGAGCCTTCAGTTTTTTTCTCCCAACACTTCTTGTGATATTCCTCCATTCATCAAGAAGAGAATGAAAAGATATGGACCAATCTTCAAGACAAACTTGGTTGGAAGACCAGTTGTAGTGTCCACAGACCCTGATCTTAACTACTTCATATTCCAACAGGAAGGGAAAATATTCCAGAGTTGGTATCCAGATACATTCACAGAGATATTTGGGCAACAAAATGTAGGTTCCTTACATGGTTTTATGTATAAGTACCTTAAGAACATGATGCTCAATTTGTTTGGTCCTGAAAGTCTTAAAAAGATGATCTCAGAGGTTGAACAAGCAGCCTGCAGAACATTACAACAGGCGTCGTGTCAGGACAGCGTCGAGCTGAAGGAAGCAACAGAAACGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATCCAACCGAGTCCTCCGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTCATCTCATTCCCTCTCAACATTCCAGGAACAGCTTATAACAAATGTTTGCAGGGTAGAAAAAAAGCAATGAAGATGCTTAAGAGCATGCTGCAGGAAAGAAGGGAAATGCCTAGGAAACAACAGAAGGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAGAGGGAACACTCTTAACAGAAGCAATAGCTCTGGACCTCATGTTTGTGCTTCTCTTTGCAAGCTTCGAAACCACTTCTCAGGCCCTTACTTATGCCATCAAATTACTCTCTGACAATCCCTTGGTGTTCAAGCAATTACAAGAAGAACATGAAGCCATCCTTGAACGACGTGAGAATCCTAACTCTGGAGTCACATGGCAAGAATATAAATCAATGACATTTACATTTCAGCTCATAACCGAAACTGCGAGACTTGCAAATATAGTTCCAGGAATCTTCCGGAAGGCACTAAGGGAAATTAATTTTAAGGGATATACCATACCAGCAGGATGGGCAATCATGGTGTGTCCCCCAGCTGTACATTTGAACCCTGCGAAATATCAGGATCCTCTTGTCTTCAACCCATCCAGATGGGAGGGAATGGAACCGAGTGGTGCTACCAAACATTTCCTGGCTTTTGGTGGAGGCATGAGATTTTGTGTTGGGACAGAATTTGCCAAGGTTCAGATGGCAGTTTTTCTTCATTGCTTGGTAACAAAGTATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCATGTCCAGATCACAGAGAAAGATCAAAAGAAGCACGAATCAGAATGTACAACTACATATTAG
Protein sequence

>Msa0484410

MWVLCLGALVTMCIITRWVYRWRNPSCNGKLPPGTMGLPLLGESLQFFSPNTSCDIPPFIKKRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTEIFGQQNVGSLHGFMYKYLKNMMLNLFGPESLKKMISEVEQAACRTLQQASCQDSVELKEATETMIFDLTAKKLISYDPTESSENLRENFVAFIQGLISFPLNIPGTAYNKCLQGRKKAMKMLKSMLQERREMPRKQQKDFFDYVIEELRKEGTLLTEAIALDLMFVLLFASFETTSQALTYAIKLLSDNPLVFKQLQEEHEAILERRENPNSGVTWQEYKSMTFTFQLITETARLANIVPGIFRKALREINFKGYTIPAGWAIMVCPPAVHLNPAKYQDPLVFNPSRWEGMEPSGATKHFLAFGGGMRFCVGTEFAKVQMAVFLHCLVTKYRWRPIKGGNIVRTPGLQFPNGFHVQITEKDQKKHESECTTTY*