Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959250 | XP_004497487.1 | 74.411 | 297 | 76 | 0 | 2 | 298 | 260 | 556 | 2.78e-166 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959250 | sp|B9SCB6|TPS2_RICCO | 53.378 | 296 | 138 | 0 | 1 | 296 | 255 | 550 | 1.26e-118 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0894010 | Msa0959250 | 0.832792 | 7.721267e-56 | -8.615850e-47 |
| Msa0894040 | Msa0959250 | 0.814945 | 1.189408e-51 | -8.615850e-47 |
| Msa0894080 | Msa0959250 | 0.850715 | 1.419349e-60 | -8.615850e-47 |
| Msa0894100 | Msa0959250 | 0.843607 | 1.262644e-58 | -8.615850e-47 |
| Msa0920710 | Msa0959250 | 0.830987 | 2.154175e-55 | -8.615850e-47 |
| Msa0920720 | Msa0959250 | 0.855784 | 5.000470e-62 | -8.615850e-47 |
| Msa0920760 | Msa0959250 | 0.816308 | 5.912538e-52 | -8.615850e-47 |
| Msa0920770 | Msa0959250 | 0.823524 | 1.322238e-53 | -8.615850e-47 |
| Msa0920810 | Msa0959250 | 0.838406 | 2.931365e-57 | -8.615850e-47 |
| Msa0920820 | Msa0959250 | 0.828234 | 1.006756e-54 | -8.615850e-47 |
| Msa0959170 | Msa0959250 | 0.800607 | 1.331271e-48 | -8.615850e-47 |
| Msa0959210 | Msa0959250 | 0.835201 | 1.926049e-56 | -8.615850e-47 |
| Msa0959240 | Msa0959250 | 0.806297 | 8.808240e-50 | -8.615850e-47 |
| Msa0959250 | Msa0967190 | 0.810720 | 1.001888e-50 | -8.615850e-47 |
| Msa0959250 | Msa0967200 | 0.820876 | 5.441233e-53 | -8.615850e-47 |
| Msa0959250 | Msa0995410 | 0.823790 | 1.145776e-53 | -8.615850e-47 |
| Msa0959250 | Msa0995430 | 0.831167 | 1.946040e-55 | -8.615850e-47 |
| Msa0959250 | Msa0995440 | 0.861087 | 1.312677e-63 | -8.615850e-47 |
| Msa0959250 | Msa0995460 | 0.809564 | 1.778300e-50 | -8.615850e-47 |
| Msa0959250 | Msa0995470 | 0.803127 | 4.043020e-49 | -8.615850e-47 |
| Msa0959250 | Msa0995480 | 0.817216 | 3.699825e-52 | -8.615850e-47 |
| Msa0959250 | Msa0995490 | 0.827897 | 1.213880e-54 | -8.615850e-47 |
| Msa0959250 | Msa0995500 | 0.821553 | 3.798001e-53 | -8.615850e-47 |
| Msa0959250 | Msa0995520 | 0.803105 | 4.086198e-49 | -8.615850e-47 |
| Msa0959250 | Msa0995600 | 0.847235 | 1.314955e-59 | -8.615850e-47 |
| Msa0959250 | Msa0995610 | 0.821102 | 4.826293e-53 | -8.615850e-47 |
| Msa0959250 | Msa0995620 | 0.807570 | 4.739822e-50 | -8.615850e-47 |
| Msa0959250 | Msa0995630 | 0.831266 | 1.840219e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959250 | MtrunA17_Chr7g0236971 | 69.128 | 298 | 92 | 0 | 1 | 298 | 104 | 401 | 9.60e-158 | 446 |
| Msa0959250 | MtrunA17_Chr7g0237011 | 69.128 | 298 | 92 | 0 | 1 | 298 | 201 | 498 | 9.28e-157 | 447 |
| Msa0959250 | MtrunA17_Chr7g0236961 | 69.128 | 298 | 92 | 0 | 1 | 298 | 201 | 498 | 1.14e-156 | 446 |
| Msa0959250 | MtrunA17_Chr7g0237001 | 69.128 | 298 | 92 | 0 | 1 | 298 | 256 | 553 | 3.38e-156 | 447 |
| Msa0959250 | MtrunA17_Chr7g0237041 | 69.128 | 298 | 92 | 0 | 1 | 298 | 256 | 553 | 3.38e-156 | 447 |
| Msa0959250 | MtrunA17_Chr7g0237081 | 69.128 | 298 | 92 | 0 | 1 | 298 | 256 | 553 | 3.38e-156 | 447 |
| Msa0959250 | MtrunA17_Chr7g0237051 | 69.128 | 298 | 92 | 0 | 1 | 298 | 256 | 553 | 3.38e-156 | 447 |
| Msa0959250 | MtrunA17_Chr7g0236991 | 69.128 | 298 | 92 | 0 | 1 | 298 | 256 | 553 | 3.57e-156 | 447 |
| Msa0959250 | MtrunA17_Chr6g0465441 | 67.450 | 298 | 97 | 0 | 1 | 298 | 256 | 553 | 1.32e-149 | 431 |
| Msa0959250 | MtrunA17_Chr3g0082691 | 65.101 | 298 | 104 | 0 | 1 | 298 | 256 | 553 | 2.04e-149 | 430 |
| Msa0959250 | MtrunA17_Chr6g0465851 | 66.779 | 298 | 99 | 0 | 1 | 298 | 221 | 518 | 1.47e-148 | 426 |
| Msa0959250 | MtrunA17_Chr6g0465911 | 66.779 | 298 | 99 | 0 | 1 | 298 | 256 | 553 | 5.28e-148 | 426 |
| Msa0959250 | MtrunA17_Chr6g0466051 | 66.779 | 298 | 99 | 0 | 1 | 298 | 256 | 553 | 5.77e-148 | 426 |
| Msa0959250 | MtrunA17_Chr5g0425371 | 66.107 | 298 | 101 | 0 | 1 | 298 | 256 | 553 | 1.39e-146 | 423 |
| Msa0959250 | MtrunA17_Chr4g0024691 | 67.450 | 298 | 97 | 0 | 1 | 298 | 264 | 561 | 6.63e-144 | 416 |
| Msa0959250 | MtrunA17_Chr3g0105071 | 63.758 | 298 | 108 | 0 | 1 | 298 | 260 | 557 | 1.92e-143 | 415 |
| Msa0959250 | MtrunA17_Chr6g0451711 | 62.752 | 298 | 111 | 0 | 1 | 298 | 260 | 557 | 4.56e-141 | 409 |
| Msa0959250 | MtrunA17_Chr5g0431651 | 63.176 | 296 | 109 | 0 | 1 | 296 | 255 | 550 | 3.80e-139 | 404 |
| Msa0959250 | MtrunA17_Chr5g0431571 | 64.527 | 296 | 105 | 0 | 1 | 296 | 252 | 547 | 5.67e-138 | 400 |
| Msa0959250 | MtrunA17_Chr4g0042111 | 57.627 | 295 | 125 | 0 | 1 | 295 | 265 | 559 | 4.08e-125 | 368 |
| Msa0959250 | MtrunA17_Chr6g0466031 | 64.615 | 260 | 92 | 0 | 39 | 298 | 1 | 260 | 4.94e-122 | 350 |
| Msa0959250 | MtrunA17_Chr7g0237061 | 60.769 | 260 | 79 | 2 | 39 | 298 | 1 | 237 | 3.99e-108 | 313 |
| Msa0959250 | MtrunA17_Chr7g0237021 | 68.605 | 172 | 54 | 0 | 127 | 298 | 1 | 172 | 3.60e-86 | 255 |
| Msa0959250 | MtrunA17_Chr7g0236941 | 68.605 | 172 | 54 | 0 | 127 | 298 | 1 | 172 | 3.60e-86 | 255 |
| Msa0959250 | MtrunA17_Chr2g0319041 | 42.857 | 301 | 167 | 4 | 1 | 298 | 259 | 557 | 3.34e-84 | 263 |
| Msa0959250 | MtrunA17_Chr2g0319051 | 41.333 | 300 | 172 | 4 | 1 | 298 | 217 | 514 | 5.78e-83 | 259 |
| Msa0959250 | MtrunA17_Chr8g0336181 | 41.860 | 301 | 170 | 4 | 1 | 298 | 258 | 556 | 9.76e-81 | 254 |
| Msa0959250 | MtrunA17_Chr6g0465941 | 63.953 | 172 | 62 | 0 | 127 | 298 | 1 | 172 | 3.01e-79 | 238 |
| Msa0959250 | MtrunA17_Chr6g0466121 | 63.953 | 172 | 62 | 0 | 127 | 298 | 1 | 172 | 3.01e-79 | 238 |
| Msa0959250 | MtrunA17_Chr6g0465991 | 63.953 | 172 | 62 | 0 | 127 | 298 | 1 | 172 | 3.01e-79 | 238 |
| Msa0959250 | MtrunA17_Chr6g0466091 | 63.953 | 172 | 62 | 0 | 127 | 298 | 1 | 172 | 3.01e-79 | 238 |
| Msa0959250 | MtrunA17_Chr6g0465881 | 63.372 | 172 | 63 | 0 | 127 | 298 | 1 | 172 | 1.51e-78 | 236 |
| Msa0959250 | MtrunA17_Chr5g0445501 | 62.791 | 172 | 64 | 0 | 127 | 298 | 1 | 172 | 2.46e-78 | 235 |
| Msa0959250 | MtrunA17_Chr2g0319081 | 39.333 | 300 | 167 | 5 | 1 | 298 | 141 | 427 | 4.18e-74 | 233 |
| Msa0959250 | MtrunA17_Chr7g0236921 | 63.924 | 158 | 53 | 1 | 145 | 298 | 1 | 158 | 7.81e-71 | 216 |
| Msa0959250 | MtrunA17_Chr7g0236931 | 61.039 | 154 | 57 | 1 | 145 | 298 | 1 | 151 | 3.57e-65 | 201 |
| Msa0959250 | MtrunA17_Chr7g0237031 | 73.451 | 113 | 30 | 0 | 1 | 113 | 201 | 313 | 1.02e-56 | 185 |
| Msa0959250 | MtrunA17_Chr7g0236951 | 73.451 | 113 | 30 | 0 | 1 | 113 | 201 | 313 | 1.07e-56 | 185 |
| Msa0959250 | MtrunA17_Chr5g0445511 | 61.832 | 131 | 50 | 0 | 1 | 131 | 109 | 239 | 4.58e-56 | 181 |
| Msa0959250 | MtrunA17_Chr6g0465931 | 71.186 | 118 | 34 | 0 | 1 | 118 | 221 | 338 | 2.05e-54 | 180 |
| Msa0959250 | MtrunA17_Chr4g0023911 | 31.987 | 297 | 201 | 1 | 1 | 296 | 283 | 579 | 2.43e-54 | 185 |
| Msa0959250 | MtrunA17_Chr6g0466111 | 71.186 | 118 | 34 | 0 | 1 | 118 | 221 | 338 | 2.83e-54 | 179 |
| Msa0959250 | MtrunA17_Chr6g0465981 | 71.186 | 118 | 34 | 0 | 1 | 118 | 256 | 373 | 5.33e-54 | 180 |
| Msa0959250 | MtrunA17_Chr6g0465871 | 71.186 | 118 | 34 | 0 | 1 | 118 | 256 | 373 | 5.33e-54 | 180 |
| Msa0959250 | MtrunA17_Chr6g0466081 | 71.186 | 118 | 34 | 0 | 1 | 118 | 256 | 373 | 5.33e-54 | 180 |
| Msa0959250 | MtrunA17_Chr2g0323151 | 32.734 | 278 | 185 | 2 | 2 | 278 | 186 | 462 | 3.17e-51 | 175 |
| Msa0959250 | MtrunA17_Chr2g0319071 | 31.786 | 280 | 160 | 5 | 19 | 296 | 237 | 487 | 3.34e-49 | 170 |
| Msa0959250 | MtrunA17_Chr2g0323131 | 32.740 | 281 | 184 | 4 | 1 | 278 | 269 | 547 | 5.32e-49 | 171 |
| Msa0959250 | MtrunA17_Chr7g0217361 | 32.432 | 296 | 199 | 1 | 1 | 295 | 12 | 307 | 1.76e-48 | 164 |
| Msa0959250 | MtrunA17_Chr2g0310331 | 32.215 | 298 | 197 | 4 | 1 | 296 | 290 | 584 | 5.64e-47 | 166 |
| Msa0959250 | MtrunA17_Chr2g0310401 | 31.650 | 297 | 200 | 3 | 1 | 296 | 136 | 430 | 9.76e-47 | 162 |
| Msa0959250 | MtrunA17_Chr4g0048921 | 32.667 | 300 | 196 | 3 | 1 | 296 | 272 | 569 | 1.29e-45 | 162 |
| Msa0959250 | MtrunA17_Chr4g0048911 | 30.169 | 295 | 198 | 3 | 1 | 290 | 265 | 556 | 2.19e-45 | 161 |
| Msa0959250 | MtrunA17_Chr4g0008621 | 45.752 | 153 | 82 | 1 | 1 | 152 | 266 | 418 | 2.11e-42 | 151 |
| Msa0959250 | MtrunA17_Chr8g0357411 | 29.966 | 297 | 206 | 2 | 1 | 296 | 292 | 587 | 1.93e-41 | 150 |
| Msa0959250 | MtrunA17_Chr6g0477121 | 27.875 | 287 | 199 | 3 | 1 | 281 | 137 | 421 | 2.84e-41 | 147 |
| Msa0959250 | MtrunA17_Chr3g0108941 | 27.365 | 296 | 209 | 4 | 1 | 292 | 220 | 513 | 2.39e-40 | 147 |
| Msa0959250 | MtrunA17_Chr3g0109031 | 28.369 | 282 | 194 | 3 | 1 | 276 | 219 | 498 | 8.55e-40 | 145 |
| Msa0959250 | MtrunA17_Chr3g0109021 | 28.369 | 282 | 194 | 3 | 1 | 276 | 219 | 498 | 2.65e-39 | 144 |
| Msa0959250 | MtrunA17_Chr6g0477111 | 27.018 | 285 | 204 | 3 | 1 | 281 | 194 | 478 | 5.61e-39 | 142 |
| Msa0959250 | MtrunA17_Chr3g0105691 | 27.500 | 280 | 199 | 3 | 1 | 276 | 252 | 531 | 1.30e-38 | 142 |
| Msa0959250 | MtrunA17_Chr3g0108971 | 27.143 | 280 | 200 | 3 | 1 | 276 | 194 | 473 | 2.52e-38 | 141 |
| Msa0959250 | MtrunA17_Chr3g0099031 | 28.716 | 296 | 205 | 4 | 1 | 292 | 219 | 512 | 2.62e-38 | 141 |
| Msa0959250 | MtrunA17_Chr3g0108991 | 27.143 | 280 | 200 | 3 | 1 | 276 | 219 | 498 | 4.17e-38 | 140 |
| Msa0959250 | MtrunA17_Chr3g0108951 | 27.143 | 280 | 200 | 3 | 1 | 276 | 219 | 498 | 4.17e-38 | 140 |
| Msa0959250 | MtrunA17_Chr3g0109001 | 27.660 | 282 | 196 | 3 | 1 | 276 | 220 | 499 | 5.06e-38 | 140 |
| Msa0959250 | MtrunA17_Chr3g0108981 | 27.305 | 282 | 197 | 3 | 1 | 276 | 195 | 474 | 3.57e-37 | 138 |
| Msa0959250 | MtrunA17_Chr3g0108961 | 27.305 | 282 | 197 | 3 | 1 | 276 | 195 | 474 | 3.57e-37 | 138 |
| Msa0959250 | MtrunA17_Chr3g0109011 | 26.950 | 282 | 198 | 3 | 1 | 276 | 194 | 473 | 2.07e-36 | 135 |
| Msa0959250 | MtrunA17_Chr8g0357231 | 29.457 | 258 | 180 | 2 | 40 | 296 | 1 | 257 | 2.66e-35 | 128 |
| Msa0959250 | MtrunA17_Chr3g0082711 | 50.000 | 116 | 41 | 1 | 183 | 298 | 1 | 99 | 1.34e-33 | 118 |
| Msa0959250 | MtrunA17_Chr2g0280581 | 26.087 | 299 | 208 | 5 | 1 | 289 | 223 | 518 | 1.55e-33 | 128 |
| Msa0959250 | MtrunA17_Chr7g0233861 | 58.333 | 72 | 21 | 1 | 1 | 72 | 96 | 158 | 9.77e-21 | 87.4 |
| Msa0959250 | MtrunA17_Chr2g0281651 | 24.028 | 283 | 203 | 7 | 1 | 277 | 68 | 344 | 3.78e-17 | 81.3 |
| Msa0959250 | MtrunA17_Chr3g0101681 | 22.772 | 303 | 205 | 11 | 9 | 296 | 492 | 780 | 1.77e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959250 | AT5G23960.2 | 39.189 | 296 | 179 | 1 | 3 | 298 | 251 | 545 | 2.15e-75 | 240 |
| Msa0959250 | AT5G23960.1 | 39.130 | 299 | 177 | 3 | 3 | 298 | 251 | 547 | 2.07e-74 | 238 |
| Msa0959250 | AT5G48110.1 | 37.793 | 299 | 181 | 5 | 1 | 298 | 45 | 339 | 7.72e-73 | 228 |
| Msa0959250 | AT1G70080.1 | 37.333 | 300 | 186 | 2 | 1 | 298 | 312 | 611 | 1.97e-72 | 234 |
| Msa0959250 | AT3G14520.1 | 35.786 | 299 | 191 | 1 | 1 | 298 | 306 | 604 | 1.63e-69 | 226 |
| Msa0959250 | AT3G14490.1 | 37.793 | 299 | 184 | 2 | 1 | 298 | 304 | 601 | 9.84e-68 | 221 |
| Msa0959250 | AT1G31950.3 | 35.786 | 299 | 191 | 1 | 1 | 298 | 309 | 607 | 7.66e-67 | 219 |
| Msa0959250 | AT1G31950.1 | 35.786 | 299 | 191 | 1 | 1 | 298 | 308 | 606 | 8.18e-67 | 219 |
| Msa0959250 | AT3G29410.2 | 35.690 | 297 | 190 | 1 | 1 | 296 | 200 | 496 | 1.23e-65 | 214 |
| Msa0959250 | AT3G14540.1 | 35.786 | 299 | 191 | 1 | 1 | 298 | 303 | 601 | 4.51e-65 | 214 |
| Msa0959250 | AT3G29410.1 | 35.452 | 299 | 192 | 1 | 1 | 298 | 305 | 603 | 1.30e-64 | 213 |
| Msa0959250 | AT4G20200.1 | 34.333 | 300 | 195 | 2 | 1 | 298 | 305 | 604 | 1.23e-62 | 208 |
| Msa0959250 | AT1G33750.1 | 33.221 | 298 | 199 | 0 | 1 | 298 | 306 | 603 | 6.62e-62 | 206 |
| Msa0959250 | AT3G32030.1 | 32.776 | 299 | 200 | 1 | 1 | 298 | 306 | 604 | 2.83e-61 | 204 |
| Msa0959250 | AT4G20210.1 | 33.000 | 300 | 199 | 2 | 1 | 298 | 301 | 600 | 7.91e-61 | 203 |
| Msa0959250 | AT5G44630.1 | 33.670 | 297 | 196 | 1 | 1 | 296 | 259 | 555 | 7.34e-60 | 200 |
| Msa0959250 | AT4G13280.2 | 33.223 | 301 | 197 | 4 | 1 | 298 | 255 | 554 | 7.66e-58 | 194 |
| Msa0959250 | AT4G13300.1 | 33.000 | 300 | 199 | 2 | 1 | 298 | 255 | 554 | 8.69e-58 | 194 |
| Msa0959250 | AT3G29190.1 | 32.781 | 302 | 193 | 4 | 1 | 296 | 302 | 599 | 8.98e-57 | 192 |
| Msa0959250 | AT2G23230.2 | 34.122 | 296 | 192 | 3 | 1 | 293 | 300 | 595 | 1.37e-55 | 190 |
| Msa0959250 | AT4G20230.2 | 32.997 | 297 | 196 | 3 | 1 | 294 | 317 | 613 | 3.01e-54 | 186 |
| Msa0959250 | AT4G20230.1 | 32.997 | 297 | 196 | 3 | 1 | 294 | 305 | 601 | 3.14e-54 | 186 |
| Msa0959250 | AT4G15870.1 | 31.894 | 301 | 189 | 4 | 1 | 298 | 311 | 598 | 1.31e-53 | 184 |
| Msa0959250 | AT2G23230.1 | 33.784 | 296 | 188 | 4 | 1 | 293 | 300 | 590 | 4.99e-53 | 182 |
| Msa0959250 | AT1G66020.1 | 31.667 | 300 | 203 | 2 | 1 | 298 | 299 | 598 | 1.96e-50 | 176 |
| Msa0959250 | AT1G48800.1 | 31.208 | 298 | 200 | 4 | 1 | 294 | 306 | 602 | 7.76e-50 | 174 |
| Msa0959250 | AT3G29110.1 | 32.215 | 298 | 200 | 2 | 1 | 296 | 298 | 595 | 1.46e-49 | 173 |
| Msa0959250 | AT1G31950.2 | 37.850 | 214 | 132 | 1 | 1 | 213 | 309 | 522 | 2.82e-49 | 171 |
| Msa0959250 | AT1G61680.1 | 32.180 | 289 | 195 | 1 | 1 | 288 | 281 | 569 | 3.67e-49 | 172 |
| Msa0959250 | AT1G61680.2 | 32.180 | 289 | 195 | 1 | 1 | 288 | 274 | 562 | 3.67e-49 | 172 |
| Msa0959250 | AT3G14540.2 | 38.537 | 205 | 126 | 0 | 1 | 205 | 303 | 507 | 3.57e-48 | 168 |
| Msa0959250 | AT4G16730.2 | 29.470 | 302 | 204 | 5 | 1 | 296 | 193 | 491 | 1.40e-47 | 166 |
| Msa0959250 | AT4G16730.1 | 29.470 | 302 | 204 | 5 | 1 | 296 | 239 | 537 | 3.31e-47 | 166 |
| Msa0959250 | AT4G13280.1 | 31.333 | 300 | 174 | 4 | 1 | 298 | 255 | 524 | 8.92e-47 | 164 |
| Msa0959250 | AT3G25810.1 | 30.263 | 304 | 206 | 3 | 1 | 298 | 294 | 597 | 6.36e-46 | 163 |
| Msa0959250 | AT2G24210.1 | 30.693 | 303 | 204 | 5 | 1 | 298 | 289 | 590 | 4.44e-44 | 158 |
| Msa0959250 | AT1G48820.1 | 29.831 | 295 | 186 | 5 | 1 | 291 | 280 | 557 | 1.55e-43 | 156 |
| Msa0959250 | AT4G16740.1 | 30.333 | 300 | 202 | 6 | 1 | 298 | 270 | 564 | 2.78e-42 | 153 |
| Msa0959250 | AT3G25820.1 | 30.492 | 305 | 203 | 6 | 1 | 298 | 292 | 594 | 1.09e-41 | 152 |
| Msa0959250 | AT3G25830.1 | 30.492 | 305 | 203 | 6 | 1 | 298 | 292 | 594 | 1.09e-41 | 152 |
| Msa0959250 | AT3G25820.2 | 43.434 | 99 | 53 | 1 | 1 | 99 | 292 | 387 | 3.21e-22 | 96.3 |
| Msa0959250 | AT4G16740.2 | 35.772 | 123 | 78 | 1 | 1 | 123 | 270 | 391 | 5.73e-22 | 95.1 |
| Msa0959250 | AT1G66020.2 | 36.585 | 123 | 76 | 2 | 1 | 121 | 299 | 421 | 9.20e-21 | 92.0 |
| Msa0959250 | AT1G79460.1 | 22.819 | 298 | 217 | 9 | 8 | 298 | 488 | 779 | 2.73e-17 | 82.8 |
| Msa0959250 | AT3G25820.4 | 41.667 | 72 | 42 | 0 | 1 | 72 | 292 | 363 | 8.32e-15 | 74.7 |
| Msa0959250 | AT3G25820.3 | 41.667 | 72 | 42 | 0 | 1 | 72 | 292 | 363 | 8.32e-15 | 74.7 |
| Msa0959250 | AT4G16740.4 | 36.111 | 72 | 46 | 0 | 1 | 72 | 270 | 341 | 6.82e-12 | 65.9 |
| Msa0959250 | AT4G16740.3 | 36.111 | 72 | 46 | 0 | 1 | 72 | 270 | 341 | 6.82e-12 | 65.9 |
Find 53 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTTGAACCCTTCTTAA+AGG | 0.194932 | 6_3:-75722343 | Msa0959250:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_3:+75722844 | None:intergenic |
| GTCATCAATGTATGATAAAA+TGG | 0.272756 | 6_3:+75722802 | None:intergenic |
| CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6_3:-75721374 | Msa0959250:CDS |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_3:-75722448 | Msa0959250:CDS |
| TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6_3:-75721172 | Msa0959250:CDS |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_3:-75722889 | Msa0959250:CDS |
| ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6_3:-75721380 | Msa0959250:CDS |
| AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6_3:-75721204 | Msa0959250:CDS |
| AACTCTTACTTCCTTTAAGA+AGG | 0.385301 | 6_3:+75722332 | None:intergenic |
| TCAGTTGGCTTAAGACATTC+CGG | 0.387442 | 6_3:+75721092 | None:intergenic |
| CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6_3:-75721190 | Msa0959250:CDS |
| CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6_3:-75721428 | Msa0959250:CDS |
| ATAGTTAGCATTCAGCCATT+TGG | 0.402662 | 6_3:+75721545 | None:intergenic |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_3:-75722415 | Msa0959250:CDS |
| CTTCCTTTAAGAAGGGTTCA+AGG | 0.412216 | 6_3:+75722340 | None:intergenic |
| TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6_3:+75721519 | None:intergenic |
| TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6_3:+75722429 | None:intergenic |
| ATAAATACTCAAATTTCTAC+AGG | 0.441751 | 6_3:+75720939 | None:intergenic |
| GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6_3:-75721427 | Msa0959250:CDS |
| AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6_3:-75721127 | Msa0959250:CDS |
| TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6_3:-75721373 | Msa0959250:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_3:-75722460 | Msa0959250:CDS |
| GATGACACTTACGATGCATA+TGG | 0.455602 | 6_3:-75722785 | Msa0959250:CDS |
| ACGACTTGTTACATTGGAAT+GGG | 0.461126 | 6_3:-75721459 | Msa0959250:CDS |
| TACGACTTGTTACATTGGAA+TGG | 0.469495 | 6_3:-75721460 | Msa0959250:CDS |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_3:-75722375 | Msa0959250:CDS |
| CTTATATGAGTGAGGCCAAA+TGG | 0.471857 | 6_3:-75721560 | Msa0959250:CDS |
| GAGGGAATATGATATGAATA+GGG | 0.475500 | 6_3:-75721171 | Msa0959250:CDS |
| TGGCCTCACTCATATAAGCT+TGG | 0.493836 | 6_3:+75721565 | None:intergenic |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_3:+75722859 | None:intergenic |
| TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6_3:+75721059 | None:intergenic |
| CGCTTGGAAAGATATAAATC+CGG | 0.516760 | 6_3:-75721111 | Msa0959250:CDS |
| TTCCTTTAAGAAGGGTTCAA+GGG | 0.525563 | 6_3:+75722341 | None:intergenic |
| ACTCTTACTTCCTTTAAGAA+GGG | 0.528313 | 6_3:+75722333 | None:intergenic |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_3:-75722457 | Msa0959250:CDS |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_3:+75722845 | None:intergenic |
| ATAGGTAACGGAACTTCAGT+TGG | 0.538099 | 6_3:+75721077 | None:intergenic |
| AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6_3:-75721224 | Msa0959250:intron |
| TAACAAGTCGTAGCCAACAC+TGG | 0.539809 | 6_3:+75721471 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_3:-75722847 | Msa0959250:CDS |
| GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6_3:-75721189 | Msa0959250:CDS |
| ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6_3:-75721484 | Msa0959250:CDS |
| AACAAGTCGTAGCCAACACT+GGG | 0.585209 | 6_3:+75721472 | None:intergenic |
| AACCGGATAGTGGAAGGAGT+TGG | 0.587957 | 6_3:-75722945 | None:intergenic |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_3:+75722905 | None:intergenic |
| CACATATCAACAATATCAAG+TGG | 0.594145 | 6_3:-75721498 | Msa0959250:CDS |
| TTGGCTACGACTTGTTACAT+TGG | 0.603074 | 6_3:-75721465 | Msa0959250:CDS |
| GATAACTACACACACTCTGA+CGG | 0.610210 | 6_3:-75720999 | Msa0959250:CDS |
| AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6_3:-75721568 | Msa0959250:CDS |
| GGATGAAATTGTGTCAAGCG+AGG | 0.666273 | 6_3:-75721352 | Msa0959250:intron |
| ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6_3:+75721065 | None:intergenic |
| TAACTATATACCAACAACAG+AGG | 0.703519 | 6_3:-75721529 | Msa0959250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCATTTTAAATTTTTTG+TGG | - | chr6_3:75721666-75721685 | Msa0959250:intron | 10.0% |
| !!! | CAATTAACATTTATTTTATA+TGG | - | chr6_3:75722266-75722285 | Msa0959250:intron | 10.0% |
| !!! | ATTTCATTTTAAATTTTTTG+TGG | - | chr6_3:75721666-75721685 | Msa0959250:intron | 10.0% |
| !!! | CAATTAACATTTATTTTATA+TGG | - | chr6_3:75722266-75722285 | Msa0959250:intron | 10.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | + | chr6_3:75721212-75721231 | None:intergenic | 15.0% |
| !!! | TTGAAATCAAAATGATTTTT+AGG | - | chr6_3:75721403-75721422 | Msa0959250:CDS | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | - | chr6_3:75721767-75721786 | Msa0959250:intron | 15.0% |
| !!! | TTGCATTAATTTTTATTCTT+TGG | + | chr6_3:75722046-75722065 | None:intergenic | 15.0% |
| !!! | TTAATTACATAGTTTTTCTT+TGG | - | chr6_3:75722239-75722258 | Msa0959250:intron | 15.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | + | chr6_3:75721212-75721231 | None:intergenic | 15.0% |
| !!! | TTGAAATCAAAATGATTTTT+AGG | - | chr6_3:75721403-75721422 | Msa0959250:CDS | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | - | chr6_3:75721767-75721786 | Msa0959250:intron | 15.0% |
| !!! | TTGCATTAATTTTTATTCTT+TGG | + | chr6_3:75722046-75722065 | None:intergenic | 15.0% |
| !!! | TTAATTACATAGTTTTTCTT+TGG | - | chr6_3:75722239-75722258 | Msa0959250:intron | 15.0% |
| !!! | TTCTTTTAACAATAGAGTAA+TGG | - | chr6_3:75721374-75721393 | Msa0959250:CDS | 20.0% |
| !!! | AAATCAAAATGATTTTTAGG+TGG | - | chr6_3:75721406-75721425 | Msa0959250:CDS | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_3:75721407-75721426 | Msa0959250:CDS | 20.0% |
| !!! | AATTTTTTGTGGTTATCAAA+TGG | - | chr6_3:75721677-75721696 | Msa0959250:intron | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+TGG | - | chr6_3:75721905-75721924 | Msa0959250:intron | 20.0% |
| !!! | TTCTTTTAACAATAGAGTAA+TGG | - | chr6_3:75721374-75721393 | Msa0959250:CDS | 20.0% |
| !!! | AAATCAAAATGATTTTTAGG+TGG | - | chr6_3:75721406-75721425 | Msa0959250:CDS | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_3:75721407-75721426 | Msa0959250:CDS | 20.0% |
| !!! | AATTTTTTGTGGTTATCAAA+TGG | - | chr6_3:75721677-75721696 | Msa0959250:intron | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+TGG | - | chr6_3:75721905-75721924 | Msa0959250:intron | 20.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | chr6_3:75721083-75721102 | None:intergenic | 25.0% |
| !!! | TGAATTAGAACTTTTGACTA+AGG | - | chr6_3:75721129-75721148 | Msa0959250:CDS | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | - | chr6_3:75721241-75721260 | Msa0959250:intron | 25.0% |
| ! | AATTTATCCATCTTCAATCT+TGG | - | chr6_3:75721286-75721305 | Msa0959250:intron | 25.0% |
| ! | TTCAATCAAATAACTTCATG+AGG | + | chr6_3:75721843-75721862 | None:intergenic | 25.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | - | chr6_3:75721982-75722001 | Msa0959250:intron | 25.0% |
| !!! | TATCTTGACATTTTAACTAC+TGG | - | chr6_3:75722173-75722192 | Msa0959250:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | chr6_3:75721083-75721102 | None:intergenic | 25.0% |
| !!! | TGAATTAGAACTTTTGACTA+AGG | - | chr6_3:75721129-75721148 | Msa0959250:CDS | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | - | chr6_3:75721241-75721260 | Msa0959250:intron | 25.0% |
| ! | AATTTATCCATCTTCAATCT+TGG | - | chr6_3:75721286-75721305 | Msa0959250:intron | 25.0% |
| ! | TTCAATCAAATAACTTCATG+AGG | + | chr6_3:75721843-75721862 | None:intergenic | 25.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | - | chr6_3:75721982-75722001 | Msa0959250:intron | 25.0% |
| !!! | TATCTTGACATTTTAACTAC+TGG | - | chr6_3:75722173-75722192 | Msa0959250:intron | 25.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_3:75720994-75721013 | Msa0959250:CDS | 30.0% |
| ATATTGGGGCTCAAAATATA+CGG | + | chr6_3:75721026-75721045 | None:intergenic | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | + | chr6_3:75721041-75721060 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_3:75721042-75721061 | None:intergenic | 30.0% |
| !! | TTTTGACTAAGGCAATTGAA+AGG | - | chr6_3:75721140-75721159 | Msa0959250:CDS | 30.0% |
| TAAAGCAACTTCATGTAATC+CGG | + | chr6_3:75721456-75721475 | None:intergenic | 30.0% | |
| ! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_3:75721467-75721486 | Msa0959250:CDS | 30.0% |
| ! | ACTCTTACTTCCTTTAAGAA+GGG | + | chr6_3:75721552-75721571 | None:intergenic | 30.0% |
| ! | AACTCTTACTTCCTTTAAGA+AGG | + | chr6_3:75721553-75721572 | None:intergenic | 30.0% |
| TGGTTATCAAATGGAAGTTT+AGG | - | chr6_3:75721686-75721705 | Msa0959250:intron | 30.0% | |
| ! | AAAGTATCACCATAATCACT+TGG | - | chr6_3:75721802-75721821 | Msa0959250:intron | 30.0% |
| ! | TCATGAGGATACATTTTTCT+TGG | + | chr6_3:75721828-75721847 | None:intergenic | 30.0% |
| AACTCTGTTAGTAAAATCCA+TGG | + | chr6_3:75721925-75721944 | None:intergenic | 30.0% | |
| TGCAAAAAACTTATTGTCCA+TGG | - | chr6_3:75722061-75722080 | Msa0959250:intron | 30.0% | |
| AAACTGAGTTCATATAACCA+TGG | + | chr6_3:75722081-75722100 | None:intergenic | 30.0% | |
| TAACTATATACCAACAACAG+AGG | - | chr6_3:75722353-75722372 | Msa0959250:CDS | 30.0% | |
| CACATATCAACAATATCAAG+TGG | - | chr6_3:75722384-75722403 | Msa0959250:CDS | 30.0% | |
| GACAAAAGACATCTTTGATT+GGG | - | chr6_3:75722455-75722474 | Msa0959250:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | - | chr6_3:75722693-75722712 | Msa0959250:intron | 30.0% | |
| TGAGGGAATATGATATGAAT+AGG | - | chr6_3:75722710-75722729 | Msa0959250:intron | 30.0% | |
| GAGGGAATATGATATGAATA+GGG | - | chr6_3:75722711-75722730 | Msa0959250:intron | 30.0% | |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | + | chr6_3:75722743-75722762 | None:intergenic | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | + | chr6_3:75722756-75722775 | None:intergenic | 30.0% |
| AAAAGAAAATTGACAACGCT+TGG | - | chr6_3:75722755-75722774 | Msa0959250:CDS | 30.0% | |
| TCAATCCTGTAGAAATTTGA+TGG | - | chr6_3:75722938-75722957 | Msa0959250:CDS | 30.0% | |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_3:75720994-75721013 | Msa0959250:CDS | 30.0% |
| ATATTGGGGCTCAAAATATA+CGG | + | chr6_3:75721026-75721045 | None:intergenic | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | + | chr6_3:75721041-75721060 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_3:75721042-75721061 | None:intergenic | 30.0% |
| !! | TTTTGACTAAGGCAATTGAA+AGG | - | chr6_3:75721140-75721159 | Msa0959250:CDS | 30.0% |
| TAAAGCAACTTCATGTAATC+CGG | + | chr6_3:75721456-75721475 | None:intergenic | 30.0% | |
| ! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_3:75721467-75721486 | Msa0959250:CDS | 30.0% |
| ! | ACTCTTACTTCCTTTAAGAA+GGG | + | chr6_3:75721552-75721571 | None:intergenic | 30.0% |
| ! | AACTCTTACTTCCTTTAAGA+AGG | + | chr6_3:75721553-75721572 | None:intergenic | 30.0% |
| TGGTTATCAAATGGAAGTTT+AGG | - | chr6_3:75721686-75721705 | Msa0959250:intron | 30.0% | |
| ! | AAAGTATCACCATAATCACT+TGG | - | chr6_3:75721802-75721821 | Msa0959250:intron | 30.0% |
| ! | TCATGAGGATACATTTTTCT+TGG | + | chr6_3:75721828-75721847 | None:intergenic | 30.0% |
| AACTCTGTTAGTAAAATCCA+TGG | + | chr6_3:75721925-75721944 | None:intergenic | 30.0% | |
| TGCAAAAAACTTATTGTCCA+TGG | - | chr6_3:75722061-75722080 | Msa0959250:intron | 30.0% | |
| AAACTGAGTTCATATAACCA+TGG | + | chr6_3:75722081-75722100 | None:intergenic | 30.0% | |
| TAACTATATACCAACAACAG+AGG | - | chr6_3:75722353-75722372 | Msa0959250:CDS | 30.0% | |
| CACATATCAACAATATCAAG+TGG | - | chr6_3:75722384-75722403 | Msa0959250:CDS | 30.0% | |
| GACAAAAGACATCTTTGATT+GGG | - | chr6_3:75722455-75722474 | Msa0959250:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | - | chr6_3:75722693-75722712 | Msa0959250:intron | 30.0% | |
| TGAGGGAATATGATATGAAT+AGG | - | chr6_3:75722710-75722729 | Msa0959250:intron | 30.0% | |
| GAGGGAATATGATATGAATA+GGG | - | chr6_3:75722711-75722730 | Msa0959250:intron | 30.0% | |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | + | chr6_3:75722743-75722762 | None:intergenic | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | + | chr6_3:75722756-75722775 | None:intergenic | 30.0% |
| AAAAGAAAATTGACAACGCT+TGG | - | chr6_3:75722755-75722774 | Msa0959250:CDS | 30.0% | |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_3:75720993-75721012 | Msa0959250:CDS | 35.0% |
| TTCCTTGCTTGAGAATATTG+GGG | + | chr6_3:75721040-75721059 | None:intergenic | 35.0% | |
| CATATCGCGTACAAAAACTT+GGG | + | chr6_3:75721353-75721372 | None:intergenic | 35.0% | |
| ACATATCGCGTACAAAAACT+TGG | + | chr6_3:75721354-75721373 | None:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | - | chr6_3:75721422-75721441 | Msa0959250:CDS | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_3:75721507-75721526 | Msa0959250:CDS | 35.0% | |
| ! | TTCCTTTAAGAAGGGTTCAA+GGG | + | chr6_3:75721544-75721563 | None:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTGATTA+TGG | + | chr6_3:75721814-75721833 | None:intergenic | 35.0% |
| AATCCAAGCTTATATGAGTG+AGG | - | chr6_3:75722314-75722333 | Msa0959250:intron | 35.0% | |
| ATAGTTAGCATTCAGCCATT+TGG | + | chr6_3:75722340-75722359 | None:intergenic | 35.0% | |
| !! | TACGACTTGTTACATTGGAA+TGG | - | chr6_3:75722422-75722441 | Msa0959250:CDS | 35.0% |
| !! | ACGACTTGTTACATTGGAAT+GGG | - | chr6_3:75722423-75722442 | Msa0959250:CDS | 35.0% |
| CGACAAAAGACATCTTTGAT+TGG | - | chr6_3:75722454-75722473 | Msa0959250:CDS | 35.0% | |
| ! | GCAGCAGCATTAACAATTTT+TGG | + | chr6_3:75722492-75722511 | None:intergenic | 35.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | - | chr6_3:75722658-75722677 | Msa0959250:intron | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | - | chr6_3:75722692-75722711 | Msa0959250:intron | 35.0% | |
| CGCTTGGAAAGATATAAATC+CGG | - | chr6_3:75722771-75722790 | Msa0959250:CDS | 35.0% | |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_3:75720993-75721012 | Msa0959250:CDS | 35.0% |
| TTCCTTGCTTGAGAATATTG+GGG | + | chr6_3:75721040-75721059 | None:intergenic | 35.0% | |
| CATATCGCGTACAAAAACTT+GGG | + | chr6_3:75721353-75721372 | None:intergenic | 35.0% | |
| ACATATCGCGTACAAAAACT+TGG | + | chr6_3:75721354-75721373 | None:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | - | chr6_3:75721422-75721441 | Msa0959250:CDS | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_3:75721507-75721526 | Msa0959250:CDS | 35.0% | |
| ! | TTCCTTTAAGAAGGGTTCAA+GGG | + | chr6_3:75721544-75721563 | None:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTGATTA+TGG | + | chr6_3:75721814-75721833 | None:intergenic | 35.0% |
| AATCCAAGCTTATATGAGTG+AGG | - | chr6_3:75722314-75722333 | Msa0959250:intron | 35.0% | |
| ATAGTTAGCATTCAGCCATT+TGG | + | chr6_3:75722340-75722359 | None:intergenic | 35.0% | |
| !! | TACGACTTGTTACATTGGAA+TGG | - | chr6_3:75722422-75722441 | Msa0959250:CDS | 35.0% |
| !! | ACGACTTGTTACATTGGAAT+GGG | - | chr6_3:75722423-75722442 | Msa0959250:CDS | 35.0% |
| CGACAAAAGACATCTTTGAT+TGG | - | chr6_3:75722454-75722473 | Msa0959250:CDS | 35.0% | |
| ! | GCAGCAGCATTAACAATTTT+TGG | + | chr6_3:75722492-75722511 | None:intergenic | 35.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | - | chr6_3:75722658-75722677 | Msa0959250:intron | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | - | chr6_3:75722692-75722711 | Msa0959250:intron | 35.0% | |
| CGCTTGGAAAGATATAAATC+CGG | - | chr6_3:75722771-75722790 | Msa0959250:CDS | 35.0% | |
| ACTACTCTATCTCGTGCATA+CGG | + | chr6_3:75720980-75720999 | None:intergenic | 40.0% | |
| GATGACACTTACGATGCATA+TGG | - | chr6_3:75721097-75721116 | Msa0959250:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | + | chr6_3:75721296-75721315 | None:intergenic | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | - | chr6_3:75721425-75721444 | Msa0959250:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | - | chr6_3:75721434-75721453 | Msa0959250:CDS | 40.0% | |
| ! | CTTCCTTTAAGAAGGGTTCA+AGG | + | chr6_3:75721545-75721564 | None:intergenic | 40.0% |
| CTTATATGAGTGAGGCCAAA+TGG | - | chr6_3:75722322-75722341 | Msa0959250:intron | 40.0% | |
| !! | TTGGCTACGACTTGTTACAT+TGG | - | chr6_3:75722417-75722436 | Msa0959250:CDS | 40.0% |
| TGCTATACATTGCAGGCTTA+GGG | - | chr6_3:75722509-75722528 | Msa0959250:intron | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | - | chr6_3:75722678-75722697 | Msa0959250:intron | 40.0% | |
| ! | TCAGTTGGCTTAAGACATTC+CGG | + | chr6_3:75722793-75722812 | None:intergenic | 40.0% |
| !! | ATAGGTAACGGAACTTCAGT+TGG | + | chr6_3:75722808-75722827 | None:intergenic | 40.0% |
| ACACACGTCAGAATAGGTAA+CGG | + | chr6_3:75722820-75722839 | None:intergenic | 40.0% | |
| TTGAGAACACACGTCAGAAT+AGG | + | chr6_3:75722826-75722845 | None:intergenic | 40.0% | |
| !! | CAATCTCTCGCGTTTTATTG+AGG | - | chr6_3:75722843-75722862 | Msa0959250:CDS | 40.0% |
| GATAACTACACACACTCTGA+CGG | - | chr6_3:75722883-75722902 | Msa0959250:CDS | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | + | chr6_3:75720980-75720999 | None:intergenic | 40.0% | |
| GATGACACTTACGATGCATA+TGG | - | chr6_3:75721097-75721116 | Msa0959250:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | + | chr6_3:75721296-75721315 | None:intergenic | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | - | chr6_3:75721425-75721444 | Msa0959250:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | - | chr6_3:75721434-75721453 | Msa0959250:CDS | 40.0% | |
| ! | CTTCCTTTAAGAAGGGTTCA+AGG | + | chr6_3:75721545-75721564 | None:intergenic | 40.0% |
| CTTATATGAGTGAGGCCAAA+TGG | - | chr6_3:75722322-75722341 | Msa0959250:intron | 40.0% | |
| !! | TTGGCTACGACTTGTTACAT+TGG | - | chr6_3:75722417-75722436 | Msa0959250:CDS | 40.0% |
| TGCTATACATTGCAGGCTTA+GGG | - | chr6_3:75722509-75722528 | Msa0959250:intron | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | - | chr6_3:75722678-75722697 | Msa0959250:intron | 40.0% | |
| ! | TCAGTTGGCTTAAGACATTC+CGG | + | chr6_3:75722793-75722812 | None:intergenic | 40.0% |
| !! | ATAGGTAACGGAACTTCAGT+TGG | + | chr6_3:75722808-75722827 | None:intergenic | 40.0% |
| ACACACGTCAGAATAGGTAA+CGG | + | chr6_3:75722820-75722839 | None:intergenic | 40.0% | |
| TTGAGAACACACGTCAGAAT+AGG | + | chr6_3:75722826-75722845 | None:intergenic | 40.0% | |
| !! | CAATCTCTCGCGTTTTATTG+AGG | - | chr6_3:75722843-75722862 | Msa0959250:CDS | 40.0% |
| GATAACTACACACACTCTGA+CGG | - | chr6_3:75722883-75722902 | Msa0959250:CDS | 40.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | - | chr6_3:75721035-75721054 | Msa0959250:CDS | 45.0% | |
| CACCCTTGAACCCTTCTTAA+AGG | - | chr6_3:75721539-75721558 | Msa0959250:CDS | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | + | chr6_3:75722320-75722339 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | + | chr6_3:75722366-75722385 | None:intergenic | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | - | chr6_3:75722398-75722417 | Msa0959250:CDS | 45.0% | |
| AACAAGTCGTAGCCAACACT+GGG | + | chr6_3:75722413-75722432 | None:intergenic | 45.0% | |
| TAACAAGTCGTAGCCAACAC+TGG | + | chr6_3:75722414-75722433 | None:intergenic | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | - | chr6_3:75722502-75722521 | Msa0959250:intron | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | - | chr6_3:75722508-75722527 | Msa0959250:intron | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | - | chr6_3:75722530-75722549 | Msa0959250:intron | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | - | chr6_3:75721035-75721054 | Msa0959250:CDS | 45.0% | |
| CACCCTTGAACCCTTCTTAA+AGG | - | chr6_3:75721539-75721558 | Msa0959250:CDS | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | + | chr6_3:75722320-75722339 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | + | chr6_3:75722366-75722385 | None:intergenic | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | - | chr6_3:75722398-75722417 | Msa0959250:CDS | 45.0% | |
| AACAAGTCGTAGCCAACACT+GGG | + | chr6_3:75722413-75722432 | None:intergenic | 45.0% | |
| TAACAAGTCGTAGCCAACAC+TGG | + | chr6_3:75722414-75722433 | None:intergenic | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | - | chr6_3:75722502-75722521 | Msa0959250:intron | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | - | chr6_3:75722508-75722527 | Msa0959250:intron | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | - | chr6_3:75722530-75722549 | Msa0959250:intron | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 75720947 | 75722957 | 75720947 | ID=Msa0959250;Name=Msa0959250 |
| chr6_3 | mRNA | 75720947 | 75722957 | 75720947 | ID=Msa0959250-mRNA-1;Parent=Msa0959250;Name=Msa0959250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|298 |
| chr6_3 | exon | 75722743 | 75722957 | 75722743 | ID=Msa0959250-mRNA-1:exon:13591;Parent=Msa0959250-mRNA-1 |
| chr6_3 | exon | 75722341 | 75722479 | 75722341 | ID=Msa0959250-mRNA-1:exon:13590;Parent=Msa0959250-mRNA-1 |
| chr6_3 | exon | 75721353 | 75721601 | 75721353 | ID=Msa0959250-mRNA-1:exon:13589;Parent=Msa0959250-mRNA-1 |
| chr6_3 | exon | 75720947 | 75721240 | 75720947 | ID=Msa0959250-mRNA-1:exon:13588;Parent=Msa0959250-mRNA-1 |
| chr6_3 | CDS | 75722743 | 75722957 | 75722743 | ID=Msa0959250-mRNA-1:cds;Parent=Msa0959250-mRNA-1 |
| chr6_3 | CDS | 75722341 | 75722479 | 75722341 | ID=Msa0959250-mRNA-1:cds;Parent=Msa0959250-mRNA-1 |
| chr6_3 | CDS | 75721353 | 75721601 | 75721353 | ID=Msa0959250-mRNA-1:cds;Parent=Msa0959250-mRNA-1 |
| chr6_3 | CDS | 75720947 | 75721240 | 75720947 | ID=Msa0959250-mRNA-1:cds;Parent=Msa0959250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
