AlfalfaGEDB | Msa0942190

M. sativa cultivar zhongmu-4 / Msa0942190

KEGG: K11647
GO: GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009267 GO:0009311 GO:0009313 GO:0009605 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010453 GO:0010455 GO:0010468 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040008 GO:0042148 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0061412 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0942190	XP_003610678.1	99.432	176	1	0	2	177	175	350	1.09e-111	352

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0942190	sp\|F4J9M5\|CHR12_ARATH	69.942	173	45	2	12	177	218	390	6.69e-70	232

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0942190	G7K2A2	99.432	176	1	0	2	177	175	350	5.20e-112	352

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0046100	Msa0942190	0.803468	3.436600e-49	-8.615850e-47
Msa0657750	Msa0942190	0.812116	4.984752e-51	-8.615850e-47
Msa0828920	Msa0942190	0.804187	2.436557e-49	-8.615850e-47
Msa0387250	Msa0942190	0.803046	4.202454e-49	-8.615850e-47
Msa0388960	Msa0942190	0.828749	7.561771e-55	-8.615850e-47
Msa0438590	Msa0942190	0.865167	7.187591e-65	-8.615850e-47
Msa0334040	Msa0942190	0.805955	1.039834e-49	-8.615850e-47
Msa0363400	Msa0942190	0.805596	1.237054e-49	-8.615850e-47
Msa0495320	Msa0942190	0.806646	7.433906e-50	-8.615850e-47
Msa0908050	Msa0942190	0.827209	1.775349e-54	-8.615850e-47
Msa0942190	Msa0990350	0.804611	1.987999e-49	-8.615850e-47
Msa0942190	Msa1037920	0.802900	4.504790e-49	-8.615850e-47
Msa0942190	Msa1179940	0.807710	4.424337e-50	-8.615850e-47
Msa0942190	Msa1179970	0.808653	2.787064e-50	-8.615850e-47
Msa0942190	Msa1236100	0.800192	1.617532e-48	-8.615850e-47
Msa0942190	Msa1313150	0.821399	4.121919e-53	-8.615850e-47
Msa0942190	Msa1423880	0.808976	2.377269e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0942190	MtrunA17_Chr5g0394201	99.432	176	1	0	2	177	175	350	1.00e-115	352
Msa0942190	MtrunA17_Chr1g0205891	80.435	184	28	2	2	177	180	363	2.29e-86	274

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0942190	AT3G06010.1	69.942	173	45	2	12	177	218	390	6.80e-71	232
Msa0942190	AT5G19310.1	65.476	168	56	2	12	177	206	373	1.36e-56	191
Msa0942190	AT5G19310.2	59.259	108	42	2	72	177	2	109	3.62e-24	99.0

Find 31 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATAAACTGCTTGTAAATT+TGG	0.073163	6_3:-16570800	Msa0942190:CDS
TTCAATACCATTTGATTGTT+TGG	0.257333	6_3:+16570750	None:intergenic
TTTGAAGAATGGAATTTCTA+AGG	0.289082	6_3:-16570707	Msa0942190:CDS
AAGAACCTTGGATTTGTAAC+TGG	0.305795	6_3:+16571335	None:intergenic
AATAAACTGCTTGTAAATTT+GGG	0.333637	6_3:-16570799	Msa0942190:CDS
TGAGGAAGATGAGGATTTGA+TGG	0.338325	6_3:-16570674	Msa0942190:CDS
ACAGAGGAATGATGCTGTTC+AGG	0.361881	6_3:-16571299	Msa0942190:intron
GATTCAGATGCTTTGAAGAA+TGG	0.397442	6_3:-16570718	Msa0942190:CDS
ATCAAATGGTATTGAACCCT+TGG	0.429598	6_3:-16570743	Msa0942190:CDS
GACAGCAGTGATTTACTTGA+AGG	0.434120	6_3:-16570634	Msa0942190:CDS
CATACATTCCATTCAAGAAA+AGG	0.438102	6_3:-16570590	None:intergenic
AGCTTTAAAAGCTGATGATC+AGG	0.449727	6_3:-16570887	Msa0942190:CDS
TTCTCCTCTTCAAAGAACCT+TGG	0.472374	6_3:+16571323	None:intergenic
AGAATAGAAGAGCAAGCAAA+AGG	0.502984	6_3:-16571418	Msa0942190:CDS
CAAAGCATCTGAATCTTCCA+AGG	0.504030	6_3:+16570726	None:intergenic
AGAGACTCCAAACAATCAAA+TGG	0.519227	6_3:-16570757	Msa0942190:CDS
GCAAAGACAACGTGCAACTC+GGG	0.524817	6_3:-16570929	Msa0942190:CDS
TATTGCAGGCATGGCATGGA+AGG	0.525468	6_3:-16570951	Msa0942190:intron
ACAATATTGCAGGCATGGCA+TGG	0.526024	6_3:-16570955	Msa0942190:intron
GGCAAAGACAACGTGCAACT+CGG	0.526390	6_3:-16570930	Msa0942190:CDS
AAATCCAAGGTTCTTTGAAG+AGG	0.529452	6_3:-16571327	Msa0942190:CDS
TTCTAAGGAATCACCTCTTG+AGG	0.538019	6_3:-16570692	Msa0942190:CDS
AAATCCTCATCTTCCTCAAG+AGG	0.550669	6_3:+16570679	None:intergenic
TCAGGAAGCTTACATGAGAA+TGG	0.557139	6_3:-16570869	Msa0942190:CDS
GAGTTCCAGTTACAAATCCA+AGG	0.578754	6_3:-16571340	Msa0942190:CDS
AAAGCATCTGAATCTTCCAA+GGG	0.588440	6_3:+16570727	None:intergenic
GGATTTGTAACTGGAACTCA+CGG	0.597702	6_3:+16571344	None:intergenic
ATCACCTCTTGAGGAAGATG+AGG	0.604453	6_3:-16570683	Msa0942190:CDS
GTGATTTACTTGAAGGTCAG+CGG	0.616779	6_3:-16570627	Msa0942190:CDS
GCTTGTAAATTTGGGAGCAG+CGG	0.624800	6_3:-16570791	Msa0942190:CDS
CTTTGAAGAGGAGAAAACAG+AGG	0.660756	6_3:-16571315	Msa0942190:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAACATGTATGTTTATA+TGG	-	chr6_3:16570780-16570799	Msa0942190:CDS	20.0%
!!	CAAAACATGTATGTTTATAT+GGG	-	chr6_3:16570781-16570800	Msa0942190:CDS	20.0%
!!	AAATAAACTGCTTGTAAATT+TGG	-	chr6_3:16571224-16571243	Msa0942190:intron	20.0%
!!	AATAAACTGCTTGTAAATTT+GGG	-	chr6_3:16571225-16571244	Msa0942190:intron	20.0%
!!	ACAAAACATGTATGTTTATA+TGG	-	chr6_3:16570780-16570799	Msa0942190:CDS	20.0%
!!	CAAAACATGTATGTTTATAT+GGG	-	chr6_3:16570781-16570800	Msa0942190:CDS	20.0%
!!	AAATAAACTGCTTGTAAATT+TGG	-	chr6_3:16571224-16571243	Msa0942190:intron	20.0%
!!	AATAAACTGCTTGTAAATTT+GGG	-	chr6_3:16571225-16571244	Msa0942190:intron	20.0%
!	AAAGATCGTTTAAGTAACTT+TGG	-	chr6_3:16571019-16571038	Msa0942190:intron	25.0%
!!	TAAGTAACTTTGGCTTAATA+TGG	-	chr6_3:16571029-16571048	Msa0942190:intron	25.0%
!	ATTCTCATAAACAATATTGC+AGG	-	chr6_3:16571059-16571078	Msa0942190:intron	25.0%
!	TTCAATACCATTTGATTGTT+TGG	+	chr6_3:16571277-16571296	None:intergenic	25.0%
!	TTTGAAGAATGGAATTTCTA+AGG	-	chr6_3:16571317-16571336	Msa0942190:CDS	25.0%
!	AAAGATCGTTTAAGTAACTT+TGG	-	chr6_3:16571019-16571038	Msa0942190:intron	25.0%
!!	TAAGTAACTTTGGCTTAATA+TGG	-	chr6_3:16571029-16571048	Msa0942190:intron	25.0%
!	ATTCTCATAAACAATATTGC+AGG	-	chr6_3:16571059-16571078	Msa0942190:intron	25.0%
!	TTCAATACCATTTGATTGTT+TGG	+	chr6_3:16571277-16571296	None:intergenic	25.0%
!	TTTGAAGAATGGAATTTCTA+AGG	-	chr6_3:16571317-16571336	Msa0942190:CDS	25.0%
	AGCAAAAAATCTTCTTGTTC+TGG	+	chr6_3:16570643-16570662	None:intergenic	30.0%
	TTGTAACAAATGAAAGACAG+CGG	+	chr6_3:16570764-16570783	None:intergenic	30.0%
!!	ACAGTTGGTATACAACTTTT+TGG	-	chr6_3:16570816-16570835	Msa0942190:CDS	30.0%
	TTCTTGCATATCCAGTATTA+TGG	+	chr6_3:16570865-16570884	None:intergenic	30.0%
!	TCAGATTTTCCCATCTTTTT+GGG	-	chr6_3:16570993-16571012	Msa0942190:intron	30.0%
!	ATCTTTTGACCCAAAAAGAT+GGG	+	chr6_3:16571005-16571024	None:intergenic	30.0%
!	CTTTTCTTGAATGGAATGTA+TGG	+	chr6_3:16571436-16571455	None:intergenic	30.0%
	AGCAAAAAATCTTCTTGTTC+TGG	+	chr6_3:16570643-16570662	None:intergenic	30.0%
	TTGTAACAAATGAAAGACAG+CGG	+	chr6_3:16570764-16570783	None:intergenic	30.0%
!!	ACAGTTGGTATACAACTTTT+TGG	-	chr6_3:16570816-16570835	Msa0942190:CDS	30.0%
	TTCTTGCATATCCAGTATTA+TGG	+	chr6_3:16570865-16570884	None:intergenic	30.0%
!	TCAGATTTTCCCATCTTTTT+GGG	-	chr6_3:16570993-16571012	Msa0942190:intron	30.0%
!	ATCTTTTGACCCAAAAAGAT+GGG	+	chr6_3:16571005-16571024	None:intergenic	30.0%
!	CTTTTCTTGAATGGAATGTA+TGG	+	chr6_3:16571436-16571455	None:intergenic	30.0%
	AGAATAGAAGAGCAAGCAAA+AGG	-	chr6_3:16570606-16570625	Msa0942190:CDS	35.0%
	AAGAACCTTGGATTTGTAAC+TGG	+	chr6_3:16570692-16570711	None:intergenic	35.0%
!	AAATCCAAGGTTCTTTGAAG+AGG	-	chr6_3:16570697-16570716	Msa0942190:CDS	35.0%
	GGGAAACTAAAATGTACAGT+TGG	-	chr6_3:16570801-16570820	Msa0942190:CDS	35.0%
	AAAGCACATGCACTTGTAAT+AGG	+	chr6_3:16570842-16570861	None:intergenic	35.0%
!	GTCAGATTTTCCCATCTTTT+TGG	-	chr6_3:16570992-16571011	Msa0942190:intron	35.0%
!	GATCTTTTGACCCAAAAAGA+TGG	+	chr6_3:16571006-16571025	None:intergenic	35.0%
	CATAAACAATATTGCAGGCA+TGG	-	chr6_3:16571064-16571083	Msa0942190:intron	35.0%
!!!	GATCATCAGCTTTTAAAGCT+TGG	+	chr6_3:16571137-16571156	None:intergenic	35.0%
!!	AGCTTTAAAAGCTGATGATC+AGG	-	chr6_3:16571137-16571156	Msa0942190:intron	35.0%
	AGAGACTCCAAACAATCAAA+TGG	-	chr6_3:16571267-16571286	Msa0942190:intron	35.0%
!	ATCAAATGGTATTGAACCCT+TGG	-	chr6_3:16571281-16571300	Msa0942190:intron	35.0%
!	AAAGCATCTGAATCTTCCAA+GGG	+	chr6_3:16571300-16571319	None:intergenic	35.0%
!!	GATTCAGATGCTTTGAAGAA+TGG	-	chr6_3:16571306-16571325	Msa0942190:CDS	35.0%
	AGAATAGAAGAGCAAGCAAA+AGG	-	chr6_3:16570606-16570625	Msa0942190:CDS	35.0%
	AAGAACCTTGGATTTGTAAC+TGG	+	chr6_3:16570692-16570711	None:intergenic	35.0%
!	AAATCCAAGGTTCTTTGAAG+AGG	-	chr6_3:16570697-16570716	Msa0942190:CDS	35.0%
	GGGAAACTAAAATGTACAGT+TGG	-	chr6_3:16570801-16570820	Msa0942190:CDS	35.0%
	AAAGCACATGCACTTGTAAT+AGG	+	chr6_3:16570842-16570861	None:intergenic	35.0%
!	GTCAGATTTTCCCATCTTTT+TGG	-	chr6_3:16570992-16571011	Msa0942190:intron	35.0%
!	GATCTTTTGACCCAAAAAGA+TGG	+	chr6_3:16571006-16571025	None:intergenic	35.0%
	CATAAACAATATTGCAGGCA+TGG	-	chr6_3:16571064-16571083	Msa0942190:intron	35.0%
!!!	GATCATCAGCTTTTAAAGCT+TGG	+	chr6_3:16571137-16571156	None:intergenic	35.0%
!!	AGCTTTAAAAGCTGATGATC+AGG	-	chr6_3:16571137-16571156	Msa0942190:intron	35.0%
	AGAGACTCCAAACAATCAAA+TGG	-	chr6_3:16571267-16571286	Msa0942190:intron	35.0%
!	ATCAAATGGTATTGAACCCT+TGG	-	chr6_3:16571281-16571300	Msa0942190:intron	35.0%
!	AAAGCATCTGAATCTTCCAA+GGG	+	chr6_3:16571300-16571319	None:intergenic	35.0%
!!	GATTCAGATGCTTTGAAGAA+TGG	-	chr6_3:16571306-16571325	Msa0942190:CDS	35.0%
	GGATTTGTAACTGGAACTCA+CGG	+	chr6_3:16570683-16570702	None:intergenic	40.0%
	GAGTTCCAGTTACAAATCCA+AGG	-	chr6_3:16570684-16570703	Msa0942190:CDS	40.0%
	TTCTCCTCTTCAAAGAACCT+TGG	+	chr6_3:16570704-16570723	None:intergenic	40.0%
!	CTTTGAAGAGGAGAAAACAG+AGG	-	chr6_3:16570709-16570728	Msa0942190:CDS	40.0%
	AAAGACAGCGGAAGAAATAG+CGG	+	chr6_3:16570752-16570771	None:intergenic	40.0%
	GCATGTGCTTTCCATAATAC+TGG	-	chr6_3:16570851-16570870	Msa0942190:CDS	40.0%
	TTGTTACTGTCTGTCTCTCT+TGG	-	chr6_3:16570937-16570956	Msa0942190:CDS	40.0%
	TGTTACTGTCTGTCTCTCTT+GGG	-	chr6_3:16570938-16570957	Msa0942190:CDS	40.0%
	TCAGGAAGCTTACATGAGAA+TGG	-	chr6_3:16571155-16571174	Msa0942190:intron	40.0%
!	CAAAGCATCTGAATCTTCCA+AGG	+	chr6_3:16571301-16571320	None:intergenic	40.0%
!	TTCTAAGGAATCACCTCTTG+AGG	-	chr6_3:16571332-16571351	Msa0942190:CDS	40.0%
	AAATCCTCATCTTCCTCAAG+AGG	+	chr6_3:16571348-16571367	None:intergenic	40.0%
	TGAGGAAGATGAGGATTTGA+TGG	-	chr6_3:16571350-16571369	Msa0942190:CDS	40.0%
	GACAGCAGTGATTTACTTGA+AGG	-	chr6_3:16571390-16571409	Msa0942190:CDS	40.0%
	GTGATTTACTTGAAGGTCAG+CGG	-	chr6_3:16571397-16571416	Msa0942190:CDS	40.0%
	GGATTTGTAACTGGAACTCA+CGG	+	chr6_3:16570683-16570702	None:intergenic	40.0%
	GAGTTCCAGTTACAAATCCA+AGG	-	chr6_3:16570684-16570703	Msa0942190:CDS	40.0%
	TTCTCCTCTTCAAAGAACCT+TGG	+	chr6_3:16570704-16570723	None:intergenic	40.0%
!	CTTTGAAGAGGAGAAAACAG+AGG	-	chr6_3:16570709-16570728	Msa0942190:CDS	40.0%
	AAAGACAGCGGAAGAAATAG+CGG	+	chr6_3:16570752-16570771	None:intergenic	40.0%
	GCATGTGCTTTCCATAATAC+TGG	-	chr6_3:16570851-16570870	Msa0942190:CDS	40.0%
	TTGTTACTGTCTGTCTCTCT+TGG	-	chr6_3:16570937-16570956	Msa0942190:CDS	40.0%
	TGTTACTGTCTGTCTCTCTT+GGG	-	chr6_3:16570938-16570957	Msa0942190:CDS	40.0%
	TCAGGAAGCTTACATGAGAA+TGG	-	chr6_3:16571155-16571174	Msa0942190:intron	40.0%
!	CAAAGCATCTGAATCTTCCA+AGG	+	chr6_3:16571301-16571320	None:intergenic	40.0%
!	TTCTAAGGAATCACCTCTTG+AGG	-	chr6_3:16571332-16571351	Msa0942190:CDS	40.0%
	AAATCCTCATCTTCCTCAAG+AGG	+	chr6_3:16571348-16571367	None:intergenic	40.0%
	TGAGGAAGATGAGGATTTGA+TGG	-	chr6_3:16571350-16571369	Msa0942190:CDS	40.0%
	GACAGCAGTGATTTACTTGA+AGG	-	chr6_3:16571390-16571409	Msa0942190:CDS	40.0%
	GTGATTTACTTGAAGGTCAG+CGG	-	chr6_3:16571397-16571416	Msa0942190:CDS	40.0%
	ACAGAGGAATGATGCTGTTC+AGG	-	chr6_3:16570725-16570744	Msa0942190:CDS	45.0%
	ACAATATTGCAGGCATGGCA+TGG	-	chr6_3:16571069-16571088	Msa0942190:intron	45.0%
	GCTTGTAAATTTGGGAGCAG+CGG	-	chr6_3:16571233-16571252	Msa0942190:intron	45.0%
	ATCACCTCTTGAGGAAGATG+AGG	-	chr6_3:16571341-16571360	Msa0942190:CDS	45.0%
	ACAGAGGAATGATGCTGTTC+AGG	-	chr6_3:16570725-16570744	Msa0942190:CDS	45.0%
	ACAATATTGCAGGCATGGCA+TGG	-	chr6_3:16571069-16571088	Msa0942190:intron	45.0%
	GCTTGTAAATTTGGGAGCAG+CGG	-	chr6_3:16571233-16571252	Msa0942190:intron	45.0%
	ATCACCTCTTGAGGAAGATG+AGG	-	chr6_3:16571341-16571360	Msa0942190:CDS	45.0%
	TATTGCAGGCATGGCATGGA+AGG	-	chr6_3:16571073-16571092	Msa0942190:intron	50.0%
	GGCAAAGACAACGTGCAACT+CGG	-	chr6_3:16571094-16571113	Msa0942190:intron	50.0%
	GCAAAGACAACGTGCAACTC+GGG	-	chr6_3:16571095-16571114	Msa0942190:intron	50.0%
	TATTGCAGGCATGGCATGGA+AGG	-	chr6_3:16571073-16571092	Msa0942190:intron	50.0%
	GGCAAAGACAACGTGCAACT+CGG	-	chr6_3:16571094-16571113	Msa0942190:intron	50.0%
	GCAAAGACAACGTGCAACTC+GGG	-	chr6_3:16571095-16571114	Msa0942190:intron	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_3	gene	16570591	16571455	16570591	ID=Msa0942190;Name=Msa0942190
chr6_3	mRNA	16570591	16571455	16570591	ID=Msa0942190-mRNA-1;Parent=Msa0942190;Name=Msa0942190-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0\|1\|0.5\|1\|1\|1\|2\|0\|177
chr6_3	exon	16571300	16571455	16571300	ID=Msa0942190-mRNA-1:exon:5041;Parent=Msa0942190-mRNA-1
chr6_3	exon	16570591	16570965	16570591	ID=Msa0942190-mRNA-1:exon:5040;Parent=Msa0942190-mRNA-1
chr6_3	CDS	16571300	16571455	16571300	ID=Msa0942190-mRNA-1:cds;Parent=Msa0942190-mRNA-1
chr6_3	CDS	16570591	16570965	16570591	ID=Msa0942190-mRNA-1:cds;Parent=Msa0942190-mRNA-1

Gene Sequence

>Msa0942190

TTGCAGAGACTATCTAGAATAGAAGAGCAAGCAAAAGGTCAGATAGAGACCAGAACAAGAAGATTTTTTGCTGAAATACTGAATGCTGTCCGTGAGTTCCAGTTACAAATCCAAGGTTCTTTGAAGAGGAGAAAACAGAGGAATGATGCTGTTCAGGCATGGCATGGAAGGCAAAGACAACGTGCAACTCGGGCTGAGAAGCTGAGATTCCAAGCTTTAAAAGCTGATGATCAGGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACGTTGCTTCTTGAAGAAACAAATAAACTGCTTGTAAATTTGGGAGCAGCGGTTCAACGTCAAAGAGACTCCAAACAATCAAATGGTATTGAACCCTTGGAAGATTCAGATGCTTTGAAGAATGGAATTTCTAAGGAATCACCTCTTGAGGAAGATGAGGATTTGATGGATTCTGATCATAATGATGACAGCAGTGATTTACTTGAAGGTCAGCGGCAATACAATTCAACCATACATTCCATTCAAGAAAAG

Protein sequence

>Msa0942190

LQRLSRIEEQAKGQIETRTRRFFAEILNAVREFQLQIQGSLKRRKQRNDAVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQRDSKQSNGIEPLEDSDALKNGISKESPLEEDEDLMDSDHNDDSSDLLEGQRQYNSTIHSIQEK