Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947430 | sp|O23653|AK2_ARATH | 73.408 | 534 | 109 | 3 | 37 | 557 | 30 | 543 | 0.0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947430 | A0A072U8D2 | 94.464 | 578 | 12 | 3 | 1 | 576 | 1 | 560 | 0.0 | 1102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003090 | Msa0947430 | -0.826401 | 2.767653e-54 | -8.615850e-47 |
| Msa0050650 | Msa0947430 | -0.834365 | 3.126325e-56 | -8.615850e-47 |
| Msa0050690 | Msa0947430 | -0.837616 | 4.680250e-57 | -8.615850e-47 |
| Msa0050800 | Msa0947430 | -0.822014 | 2.971701e-53 | -8.615850e-47 |
| Msa0705460 | Msa0947430 | 0.810841 | 9.432082e-51 | -8.615850e-47 |
| Msa0750990 | Msa0947430 | 0.805790 | 1.125819e-49 | -8.615850e-47 |
| Msa0126130 | Msa0947430 | 0.807325 | 5.341765e-50 | -8.615850e-47 |
| Msa0146680 | Msa0947430 | -0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0166070 | Msa0947430 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0392090 | Msa0947430 | -0.809658 | 1.696861e-50 | -8.615850e-47 |
| Msa0882370 | Msa0947430 | 0.978029 | 5.610399e-145 | -8.615850e-47 |
| Msa0932150 | Msa0947430 | 0.813601 | 2.357003e-51 | -8.615850e-47 |
| Msa0947430 | Msa1132330 | 0.828604 | 8.196047e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947430 | MtrunA17_Chr6g0461951 | 94.118 | 578 | 12 | 4 | 1 | 576 | 1 | 558 | 0.0 | 1093 |
| Msa0947430 | MtrunA17_Chr7g0252051 | 77.841 | 528 | 91 | 4 | 46 | 572 | 51 | 553 | 0.0 | 810 |
| Msa0947430 | MtrunA17_Chr3g0121961 | 26.400 | 500 | 311 | 11 | 82 | 557 | 79 | 545 | 2.15e-43 | 166 |
| Msa0947430 | MtrunA17_Chr8g0377971 | 26.000 | 500 | 307 | 12 | 82 | 554 | 89 | 552 | 2.67e-42 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947430 | AT5G14060.1 | 73.408 | 534 | 109 | 3 | 37 | 557 | 30 | 543 | 0.0 | 789 |
| Msa0947430 | AT5G14060.2 | 73.408 | 534 | 109 | 3 | 37 | 557 | 30 | 543 | 0.0 | 789 |
| Msa0947430 | AT5G13280.1 | 76.008 | 521 | 101 | 4 | 56 | 575 | 67 | 564 | 0.0 | 786 |
| Msa0947430 | AT3G02020.1 | 75.146 | 515 | 106 | 3 | 43 | 557 | 50 | 542 | 0.0 | 774 |
| Msa0947430 | AT5G14060.3 | 72.135 | 445 | 91 | 3 | 37 | 468 | 30 | 454 | 0.0 | 649 |
| Msa0947430 | AT1G31230.1 | 27.309 | 498 | 303 | 12 | 81 | 554 | 85 | 547 | 4.01e-44 | 169 |
| Msa0947430 | AT4G19710.1 | 26.667 | 495 | 308 | 12 | 82 | 554 | 91 | 552 | 3.31e-43 | 166 |
| Msa0947430 | AT4G19710.2 | 26.667 | 495 | 308 | 12 | 82 | 554 | 91 | 552 | 5.65e-43 | 165 |
Find 148 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCATATCTTAATAAAT+TGG | 0.158405 | 6_3:-30155970 | Msa0947430:CDS |
| TCAGCAATCATCATTAATTT+TGG | 0.171390 | 6_3:-30153659 | Msa0947430:CDS |
| CAAGACTATTTAGTTTCTTT+TGG | 0.200197 | 6_3:-30156017 | Msa0947430:CDS |
| TGAGAGTGCCCGGAGCTTTC+GGG | 0.215946 | 6_3:+30154347 | None:intergenic |
| TCTGCTTTCGGGTATATATT+TGG | 0.221487 | 6_3:+30155295 | None:intergenic |
| CCTGCAATTGCAATTGTTAC+TGG | 0.240285 | 6_3:-30155653 | Msa0947430:CDS |
| AGGGGACAGGTTCTGCTTTC+GGG | 0.250446 | 6_3:+30155284 | None:intergenic |
| GAGAAGCACGTGATTGAAAA+TGG | 0.284748 | 6_3:-30159061 | Msa0947430:CDS |
| ATGTATTATAGGGTTCTATT+TGG | 0.289250 | 6_3:-30152794 | Msa0947430:three_prime_UTR |
| AGCCTCGTCAAATGTCAAAA+AGG | 0.289534 | 6_3:+30155264 | None:intergenic |
| ACGACAATTGGGAAAGCATT+AGG | 0.291051 | 6_3:-30155447 | Msa0947430:CDS |
| GCTGATTAAGTTTATTAATC+AGG | 0.306970 | 6_3:-30152735 | Msa0947430:three_prime_UTR |
| TCTCTGCTCCAGAGCTTTGA+TGG | 0.311721 | 6_3:+30153954 | None:intergenic |
| AAGGGGACAGGTTCTGCTTT+CGG | 0.315453 | 6_3:+30155283 | None:intergenic |
| TTTCTTTCATATTACATTCA+TGG | 0.317505 | 6_3:-30159242 | Msa0947430:exon |
| GTTTATTAATCAGGCTCAAC+TGG | 0.321304 | 6_3:-30152726 | Msa0947430:three_prime_UTR |
| GATAAATGAGAATGTATTAT+AGG | 0.326181 | 6_3:-30152805 | Msa0947430:three_prime_UTR |
| TTCCGTTGCTAAATCATCTT+AGG | 0.334009 | 6_3:-30152995 | Msa0947430:exon |
| GATTTGACAGCTACGACAAT+TGG | 0.340859 | 6_3:-30155459 | Msa0947430:CDS |
| TAAAATATGTCCAGAGCATC+TGG | 0.343928 | 6_3:-30156099 | Msa0947430:intron |
| GATCTCTCAAGGTGCATCTA+AGG | 0.350683 | 6_3:-30153271 | Msa0947430:intron |
| GCAATTGTTACTGGCTTCCT+TGG | 0.372310 | 6_3:-30155644 | Msa0947430:CDS |
| TTCTGAAGCTCCTTCTTCTC+AGG | 0.373527 | 6_3:-30159386 | Msa0947430:intron |
| CGACAATTGGGAAAGCATTA+GGG | 0.375851 | 6_3:-30155446 | Msa0947430:CDS |
| ATATATTTGGATCACATGTT+AGG | 0.375982 | 6_3:+30155308 | None:intergenic |
| GCAGCATATCTTAATAAATT+GGG | 0.381607 | 6_3:-30155969 | Msa0947430:CDS |
| GATTGTTGTTCTTTCTGCTA+TGG | 0.389325 | 6_3:-30158891 | Msa0947430:CDS |
| TATACATGTGTGATGAAGTT+TGG | 0.390241 | 6_3:-30158989 | Msa0947430:CDS |
| CCAGTAACAATTGCAATTGC+AGG | 0.390513 | 6_3:+30155653 | None:intergenic |
| ATAAATGAGAATGTATTATA+GGG | 0.394603 | 6_3:-30152804 | Msa0947430:three_prime_UTR |
| CTTGCTCATATCTCTTTCCT+TGG | 0.398948 | 6_3:+30154321 | None:intergenic |
| TATTAAGAAATAAATCATAT+TGG | 0.403920 | 6_3:-30152513 | Msa0947430:three_prime_UTR |
| AGGAGTGTGGTTGAGGAAGA+AGG | 0.422430 | 6_3:-30159037 | Msa0947430:CDS |
| ACTTCTGTCTTTAGATTTGT+CGG | 0.422715 | 6_3:-30154931 | Msa0947430:CDS |
| TTTCGTGTTCTTCGAACCCT+TGG | 0.427652 | 6_3:-30153309 | Msa0947430:CDS |
| ATTGTTGTTCTTTCTGCTAT+GGG | 0.430911 | 6_3:-30158890 | Msa0947430:CDS |
| ATAAAATACACAAATGGAAA+TGG | 0.437599 | 6_3:-30153018 | Msa0947430:CDS |
| TTATAAAAGACCTGCATCTC+AGG | 0.442455 | 6_3:-30157174 | Msa0947430:intron |
| TGCAATCTCTTTGCAACAGC+CGG | 0.443468 | 6_3:+30155695 | None:intergenic |
| ATTAGGGTTACCTGAGATCC+AGG | 0.447612 | 6_3:-30155430 | Msa0947430:intron |
| CAAAGAGATTGCATGGCGAT+TGG | 0.447713 | 6_3:-30155685 | Msa0947430:CDS |
| CAGTACGACGCATTTGAGAT+TGG | 0.448466 | 6_3:-30155770 | Msa0947430:CDS |
| TTCCTACAACCCGAAAGCTC+CGG | 0.449275 | 6_3:-30154356 | Msa0947430:CDS |
| TAGATTTGTCGGTGGTGCTC+AGG | 0.452696 | 6_3:-30154920 | Msa0947430:intron |
| TGAGCATCAAATATTTATCC+TGG | 0.453819 | 6_3:-30152964 | Msa0947430:three_prime_UTR |
| TGCGGTGTTACTAATGTCTC+TGG | 0.455991 | 6_3:-30157214 | Msa0947430:CDS |
| GAGAGGATGATGGAAGTTGC+TGG | 0.458399 | 6_3:-30158944 | Msa0947430:CDS |
| AGATCCATCATCTCTCTCAT+TGG | 0.459874 | 6_3:-30153688 | Msa0947430:CDS |
| AGTGGTGGAAGAAGGAGGTT+AGG | 0.459899 | 6_3:+30159175 | None:intergenic |
| GCTAGCTTACTTTGGTGCTC+AGG | 0.462460 | 6_3:-30155236 | Msa0947430:intron |
| GCCCGGAGCTTTCGGGTTGT+AGG | 0.467599 | 6_3:+30154354 | None:intergenic |
| ACAACAATCGGCCTCTCCTC+CGG | 0.468903 | 6_3:+30158905 | None:intergenic |
| CAAGTGTATACAGAAGCTTC+AGG | 0.469473 | 6_3:-30152844 | Msa0947430:three_prime_UTR |
| TCATGTGCAGTAACAACATT+GGG | 0.469729 | 6_3:-30155495 | Msa0947430:CDS |
| GCTGCTGAGCTAGCTTACTT+TGG | 0.473389 | 6_3:-30155244 | Msa0947430:CDS |
| GTTGAGGAAGAAGGAGATGA+AGG | 0.473705 | 6_3:-30159028 | Msa0947430:CDS |
| TATGCACAAACCTGGATCTC+AGG | 0.475768 | 6_3:+30155420 | None:intergenic |
| ATTTCCAATGAGAGAGATGA+TGG | 0.483643 | 6_3:+30153684 | None:intergenic |
| CGTTGGATCCATCAAAGCTC+TGG | 0.484664 | 6_3:-30153962 | Msa0947430:CDS |
| TCCAGAGCATCTGGAAGCAC+TGG | 0.487144 | 6_3:-30156090 | Msa0947430:intron |
| ATTTGACAGCTACGACAATT+GGG | 0.487957 | 6_3:-30155458 | Msa0947430:CDS |
| GTATGAGTAGGACTCATAAT+CGG | 0.488238 | 6_3:-30152691 | Msa0947430:three_prime_UTR |
| TTCAGAACTGTGGATCAACT+TGG | 0.498133 | 6_3:-30157043 | Msa0947430:intron |
| TCGCCAGGTGAATATCTCAT+TGG | 0.501642 | 6_3:-30153121 | Msa0947430:intron |
| GTGAGGCAGAGGAATGTGTA+AGG | 0.505130 | 6_3:-30153086 | Msa0947430:CDS |
| ATAGTGAGCACTCGCATGCT+TGG | 0.505310 | 6_3:-30154161 | Msa0947430:CDS |
| GATGATGGAAGTTGCTGGAT+TGG | 0.506291 | 6_3:-30158939 | Msa0947430:CDS |
| TCCTTGGTGATGAGAGTGCC+CGG | 0.508593 | 6_3:+30154337 | None:intergenic |
| TTACAGATAAAATACACAAA+TGG | 0.509745 | 6_3:-30153024 | Msa0947430:CDS |
| AGATTAGAATATATATCTCC+AGG | 0.510345 | 6_3:+30152946 | None:intergenic |
| GGAATATCACCTTCTCTAGC+AGG | 0.510399 | 6_3:+30154394 | None:intergenic |
| AGGAAGAAGGAGATGAAGGA+GGG | 0.510671 | 6_3:-30159024 | Msa0947430:CDS |
| TGGTGGTTCGTCAGTTGCGT+CGG | 0.511088 | 6_3:-30158969 | Msa0947430:CDS |
| ACGTGGCAAGTGGTGGAAGA+AGG | 0.512671 | 6_3:+30159167 | None:intergenic |
| TCCTACAACCCGAAAGCTCC+GGG | 0.513596 | 6_3:-30154355 | Msa0947430:CDS |
| TAGAACAACAAAATACTGAT+AGG | 0.514079 | 6_3:+30152602 | None:intergenic |
| AAGGAGCTTCAGAAGAAAGA+TGG | 0.514506 | 6_3:+30159395 | None:intergenic |
| GAGGAAGAAGGAGATGAAGG+AGG | 0.514520 | 6_3:-30159025 | Msa0947430:CDS |
| TCAGTACGGTTTCCTTGCTA+AGG | 0.514582 | 6_3:-30154138 | Msa0947430:intron |
| AGTAAATGATAGTGAGGCAG+AGG | 0.514607 | 6_3:-30153097 | Msa0947430:CDS |
| AAATGGGAGGAGTGTGGTTG+AGG | 0.521852 | 6_3:-30159044 | Msa0947430:CDS |
| GATTAATTAACCTGAGAAGA+AGG | 0.528716 | 6_3:+30159376 | None:intergenic |
| TGCGTCGGCGGAGAGGATGA+TGG | 0.529495 | 6_3:-30158954 | Msa0947430:CDS |
| AACAAGAACACGTACTTGGC+GGG | 0.530574 | 6_3:+30155938 | None:intergenic |
| TCTTAATAAATTGGGTGTCA+AGG | 0.530782 | 6_3:-30155961 | Msa0947430:CDS |
| TGCTGCCACGTGGCAAGTGG+TGG | 0.532591 | 6_3:+30159160 | None:intergenic |
| AGAAGCACGTGATTGAAAAT+GGG | 0.537453 | 6_3:-30159060 | Msa0947430:CDS |
| TGTTACTGGCTTCCTTGGAA+AGG | 0.538431 | 6_3:-30155639 | Msa0947430:intron |
| TTGGAGAGTGCATGTCCACT+AGG | 0.543790 | 6_3:-30155998 | Msa0947430:CDS |
| ACTCGCATGCTTGGTCAGTA+CGG | 0.544929 | 6_3:-30154152 | Msa0947430:CDS |
| ATAGCAGAAAGAACAACAAT+CGG | 0.545247 | 6_3:+30158893 | None:intergenic |
| TGGTTCGTCAGTTGCGTCGG+CGG | 0.549574 | 6_3:-30158966 | Msa0947430:CDS |
| ATCATGTGCAGTAACAACAT+TGG | 0.549798 | 6_3:-30155496 | Msa0947430:CDS |
| AGAAGGTGATATTCCAGTAC+GGG | 0.552440 | 6_3:-30154386 | Msa0947430:CDS |
| CTCAATCACACAAGGTTGGA+AGG | 0.555157 | 6_3:+30152886 | None:intergenic |
| ACTGCTCTTACCTGAGATGC+AGG | 0.559867 | 6_3:+30157164 | None:intergenic |
| CAGGTATGGAAGGATGTTGA+TGG | 0.560605 | 6_3:-30155334 | Msa0947430:CDS |
| TATCTGTAAGTCGGAGAACT+CGG | 0.562609 | 6_3:+30153038 | None:intergenic |
| ATAGCATAATTACCTTTCCA+AGG | 0.564354 | 6_3:+30155627 | None:intergenic |
| AGTCAGTGTTTCCTTGACGT+TGG | 0.565062 | 6_3:-30153979 | Msa0947430:CDS |
| TTCCTAAGATGATTTAGCAA+CGG | 0.567780 | 6_3:+30152993 | None:intergenic |
| GAGCAGAGAACTAATACAGC+AGG | 0.568041 | 6_3:-30153940 | Msa0947430:CDS |
| TGTAATAGTCTTATAAACTA+CGG | 0.571630 | 6_3:+30152652 | None:intergenic |
| ACATCTCAATCACACAAGGT+TGG | 0.571758 | 6_3:+30152882 | None:intergenic |
| GAAGGAGTTGAAAATTTGCA+TGG | 0.576781 | 6_3:+30152904 | None:intergenic |
| TTACCTGCATTTCAGAACTG+TGG | 0.577618 | 6_3:-30157053 | Msa0947430:intron |
| AACTGTGGATCAACTTGGAG+TGG | 0.578338 | 6_3:-30157038 | Msa0947430:CDS |
| GAGAAGGTGATATTCCAGTA+CGG | 0.579138 | 6_3:-30154387 | Msa0947430:CDS |
| ACCACTTACGCAGGTATGGA+AGG | 0.583143 | 6_3:-30155344 | Msa0947430:intron |
| ACATGTGTGATGAAGTTTGG+TGG | 0.583186 | 6_3:-30158986 | Msa0947430:CDS |
| GCTGTTGCAAAGAGATTGCA+TGG | 0.587919 | 6_3:-30155692 | Msa0947430:CDS |
| GAAGGTCACGTGCAATGTGT+TGG | 0.588439 | 6_3:-30159083 | Msa0947430:CDS |
| CGTCAGTTGCGTCGGCGGAG+AGG | 0.589117 | 6_3:-30158961 | Msa0947430:CDS |
| ACTGTTCAAATGATCTCTCA+AGG | 0.590004 | 6_3:-30153282 | Msa0947430:CDS |
| ACATTCTCATTTATCAGACG+TGG | 0.599477 | 6_3:+30152813 | None:intergenic |
| ATAGGTCTAATGCAAGTGAC+GGG | 0.600654 | 6_3:+30152620 | None:intergenic |
| TTCTCATTTATCAGACGTGG+AGG | 0.603588 | 6_3:+30152816 | None:intergenic |
| TTTATTAATCAGGCTCAACT+GGG | 0.605838 | 6_3:-30152725 | Msa0947430:three_prime_UTR |
| GCAGTAACAACATTGGGTAG+AGG | 0.608651 | 6_3:-30155489 | Msa0947430:CDS |
| GATAGGTCTAATGCAAGTGA+CGG | 0.610944 | 6_3:+30152619 | None:intergenic |
| TCTCTAGTTCTTCAACAACA+TGG | 0.611032 | 6_3:+30153740 | None:intergenic |
| TCTGTCTTTAGATTTGTCGG+TGG | 0.613712 | 6_3:-30154928 | Msa0947430:CDS |
| ATTGGTAGTAAATGATAGTG+AGG | 0.616034 | 6_3:-30153103 | Msa0947430:CDS |
| TCTATGAGACCTGCTAGAGA+AGG | 0.616190 | 6_3:-30154403 | Msa0947430:CDS |
| CGGTTTCAAAGAAAGCGTGA+TGG | 0.616685 | 6_3:+30153058 | None:intergenic |
| AACTGATGACTTCACAAATG+CGG | 0.619684 | 6_3:-30155738 | Msa0947430:CDS |
| TGTTGCTGCCACGTGGCAAG+TGG | 0.628519 | 6_3:+30159157 | None:intergenic |
| TTCTTCCACCACTTGCCACG+TGG | 0.628751 | 6_3:-30159165 | Msa0947430:CDS |
| CATCAACTCTCACCTTAGCA+AGG | 0.629028 | 6_3:+30154126 | None:intergenic |
| AGCACGTGATTGAAAATGGG+AGG | 0.632569 | 6_3:-30159057 | Msa0947430:CDS |
| TGGCAAGTGGTGGAAGAAGG+AGG | 0.637824 | 6_3:+30159170 | None:intergenic |
| GTAACAACATTGGGTAGAGG+TGG | 0.638482 | 6_3:-30155486 | Msa0947430:CDS |
| TCATTTGAACAGTGACACCA+AGG | 0.642740 | 6_3:+30153292 | None:intergenic |
| TGAGGCAGAGGAATGTGTAA+GGG | 0.643775 | 6_3:-30153085 | Msa0947430:CDS |
| GAATGTGATTTGAGAATGAG+AGG | 0.645406 | 6_3:+30159460 | None:intergenic |
| GAAACGTAATGTGACCATGT+TGG | 0.655818 | 6_3:-30154186 | Msa0947430:CDS |
| CTTTGATGGATCCAACGTCA+AGG | 0.658976 | 6_3:+30153968 | None:intergenic |
| TCTCATTTATCAGACGTGGA+GGG | 0.662017 | 6_3:+30152817 | None:intergenic |
| ATATGCTGCAAAGATCCTAG+TGG | 0.664927 | 6_3:+30155983 | None:intergenic |
| GATTGAAAATGGGAGGAGTG+TGG | 0.676631 | 6_3:-30159050 | Msa0947430:CDS |
| TGCTACATCTCAATCACACA+AGG | 0.681290 | 6_3:+30152878 | None:intergenic |
| TCTATGCTGTTGCTGCCACG+TGG | 0.684772 | 6_3:+30159150 | None:intergenic |
| CAAGGAAAGAGATATGAGCA+AGG | 0.685725 | 6_3:-30154320 | Msa0947430:intron |
| GTGTGATTGAGATGTAGCAA+TGG | 0.695678 | 6_3:-30152874 | Msa0947430:three_prime_UTR |
| CATTTGAACAGTGACACCAA+GGG | 0.697565 | 6_3:+30153293 | None:intergenic |
| AGTGCTCACTATATCCAACA+TGG | 0.704441 | 6_3:+30154172 | None:intergenic |
| CTAGCAGGTCTCATAGACTG+CGG | 0.707348 | 6_3:+30154409 | None:intergenic |
| AGAACTAGAGAAAATCGCTG+TGG | 0.730866 | 6_3:-30153728 | Msa0947430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATGTAATAATTTAAAAAA+TGG | + | chr6_3:30154098-30154117 | None:intergenic | 10.0% |
| !! | AAAAAACATAGTATTTATTT+AGG | + | chr6_3:30154601-30154620 | None:intergenic | 10.0% |
| !!! | TTGTTTTGTATTTAAAATTA+TGG | - | chr6_3:30155449-30155468 | Msa0947430:CDS | 10.0% |
| !!! | ATAATTTTCTGATAAAAAAA+TGG | - | chr6_3:30156390-30156409 | Msa0947430:intron | 10.0% |
| !! | TTAAATCAATAAAAATAGTA+AGG | + | chr6_3:30158349-30158368 | None:intergenic | 10.0% |
| !! | TATTAAGAAATAAATCATAT+TGG | - | chr6_3:30159425-30159444 | Msa0947430:five_prime_UTR | 10.0% |
| !!! | AATTATTACATGTGTTATTA+TGG | - | chr6_3:30154105-30154124 | Msa0947430:intron | 15.0% |
| !!! | ATAACACCATTTTAAAATTT+GGG | + | chr6_3:30155270-30155289 | None:intergenic | 15.0% |
| !!! | TATAACACCATTTTAAAATT+TGG | + | chr6_3:30155271-30155290 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTTATTTTCAGTT+GGG | - | chr6_3:30156971-30156990 | Msa0947430:intron | 15.0% |
| !!! | TTGTTTCTGTTATAATTTAT+TGG | - | chr6_3:30157050-30157069 | Msa0947430:intron | 15.0% |
| !!! | TAATTTATTGGTCTAATTTT+TGG | - | chr6_3:30157062-30157081 | Msa0947430:intron | 15.0% |
| !! | ACACAAAATCTTATATTAAT+TGG | + | chr6_3:30157373-30157392 | None:intergenic | 15.0% |
| !! | AAATGTTAAAAAGTGAATAA+AGG | + | chr6_3:30158742-30158761 | None:intergenic | 15.0% |
| !! | ATAAATGAGAATGTATTATA+GGG | - | chr6_3:30159134-30159153 | Msa0947430:CDS | 15.0% |
| !!! | ATGTCATTTATAAATTTTAG+TGG | - | chr6_3:30159361-30159380 | Msa0947430:intron | 15.0% |
| !! | TTTCTTTCATATTACATTCA+TGG | - | chr6_3:30152696-30152715 | Msa0947430:three_prime_UTR | 20.0% |
| !! | ATTGAATGTAACTAAATGTA+TGG | - | chr6_3:30153274-30153293 | Msa0947430:CDS | 20.0% |
| !! | AAAATTGCGCAATTAAAAAT+AGG | + | chr6_3:30153664-30153683 | None:intergenic | 20.0% |
| !! | GTACTACATACATAATAATA+TGG | + | chr6_3:30153981-30154000 | None:intergenic | 20.0% |
| !!! | AAAATTGGTTTTTACATGTT+TGG | - | chr6_3:30154339-30154358 | Msa0947430:CDS | 20.0% |
| !!! | AAATTGGTTTTTACATGTTT+GGG | - | chr6_3:30154340-30154359 | Msa0947430:CDS | 20.0% |
| !!! | GGAATTAATTTTGTCTAAAT+TGG | - | chr6_3:30154374-30154393 | Msa0947430:CDS | 20.0% |
| !!! | ACATAGTATTTATTTAGGAT+CGG | + | chr6_3:30154596-30154615 | None:intergenic | 20.0% |
| !! | ATTATGTTTGTTCTGTTATT+AGG | - | chr6_3:30154681-30154700 | Msa0947430:intron | 20.0% |
| !! | TAAAAAAGGAAGGAAAAAAA+AGG | + | chr6_3:30154805-30154824 | None:intergenic | 20.0% |
| !! | AAATTCATTGTAAAAAAGGA+AGG | + | chr6_3:30154815-30154834 | None:intergenic | 20.0% |
| !! | AGTGAAATTCATTGTAAAAA+AGG | + | chr6_3:30154819-30154838 | None:intergenic | 20.0% |
| !!! | TGATTTGTGTATTTGTTTAT+AGG | - | chr6_3:30154992-30155011 | Msa0947430:intron | 20.0% |
| !!! | GTAAAATAAAAAGAAGTGTT+GGG | + | chr6_3:30156345-30156364 | None:intergenic | 20.0% |
| !!! | AGTAAAATAAAAAGAAGTGT+TGG | + | chr6_3:30156346-30156365 | None:intergenic | 20.0% |
| !!! | GATTTTGTTTTATTTTCAGT+TGG | - | chr6_3:30156970-30156989 | Msa0947430:intron | 20.0% |
| !! | TTGTAAAAAAACATAGTAGA+TGG | - | chr6_3:30157125-30157144 | Msa0947430:intron | 20.0% |
| !! | ATAGAAAATCAAATTACTAG+AGG | - | chr6_3:30157165-30157184 | Msa0947430:intron | 20.0% |
| !!! | TAATGTCTTTTTGTCAATAA+CGG | + | chr6_3:30157327-30157346 | None:intergenic | 20.0% |
| !!! | TTGACAAAAAGACATTATTT+TGG | - | chr6_3:30157330-30157349 | Msa0947430:intron | 20.0% |
| !!! | TGACAAAAAGACATTATTTT+GGG | - | chr6_3:30157331-30157350 | Msa0947430:intron | 20.0% |
| !!! | ACATGTAAAAGTATAAAAAC+CGG | + | chr6_3:30157874-30157893 | None:intergenic | 20.0% |
| !! | TCAATAAAAATAGTAAGGAT+AGG | + | chr6_3:30158344-30158363 | None:intergenic | 20.0% |
| !!! | CTACGTTTAATTATTTTTGT+TGG | - | chr6_3:30158566-30158585 | Msa0947430:intron | 20.0% |
| !! | TTACAGATAAAATACACAAA+TGG | - | chr6_3:30158914-30158933 | Msa0947430:CDS | 20.0% |
| !! | ATAAAATACACAAATGGAAA+TGG | - | chr6_3:30158920-30158939 | Msa0947430:CDS | 20.0% |
| !! | GATAAATGAGAATGTATTAT+AGG | - | chr6_3:30159133-30159152 | Msa0947430:CDS | 20.0% |
| !!! | TGTAATAGTCTTATAAACTA+CGG | + | chr6_3:30159289-30159308 | None:intergenic | 20.0% |
| ! | TATCAGTACTAGGATATAAA+TGG | + | chr6_3:30153399-30153418 | None:intergenic | 25.0% |
| ! | ATCAATTGAAATGATACAAG+AGG | + | chr6_3:30153748-30153767 | None:intergenic | 25.0% |
| ! | AATGGTCAAAATTTGTGAAA+TGG | - | chr6_3:30153877-30153896 | Msa0947430:intron | 25.0% |
| ! | ATGGTCAAAATTTGTGAAAT+GGG | - | chr6_3:30153878-30153897 | Msa0947430:intron | 25.0% |
| ! | TGATTCTAGACACATAAAAT+TGG | - | chr6_3:30154324-30154343 | Msa0947430:CDS | 25.0% |
| ! | TTGGATTCTAACTTAAAGTT+AGG | - | chr6_3:30154393-30154412 | Msa0947430:CDS | 25.0% |
| ! | GCAGAATTTGAATAAATTTC+TGG | + | chr6_3:30154548-30154567 | None:intergenic | 25.0% |
| !! | TTTTCAACATCAGAAAACAA+AGG | + | chr6_3:30154646-30154665 | None:intergenic | 25.0% |
| !! | TCATATATGAACTCATTTTC+AGG | + | chr6_3:30155408-30155427 | None:intergenic | 25.0% |
| ! | TTTATAAAACACTCATGCAA+GGG | + | chr6_3:30155654-30155673 | None:intergenic | 25.0% |
| !! | AATCGTAACCTTATCAATTT+TGG | - | chr6_3:30155740-30155759 | Msa0947430:CDS | 25.0% |
| ! | AAACCATATTGAGAATAAGA+AGG | + | chr6_3:30155767-30155786 | None:intergenic | 25.0% |
| !!! | TTTCATTTTAGTTGCTAACT+TGG | - | chr6_3:30155805-30155824 | Msa0947430:intron | 25.0% |
| !!! | CAAGACTATTTAGTTTCTTT+TGG | - | chr6_3:30155921-30155940 | Msa0947430:intron | 25.0% |
| ! | TGCAGCATATCTTAATAAAT+TGG | - | chr6_3:30155968-30155987 | Msa0947430:CDS | 25.0% |
| ! | GCAGCATATCTTAATAAATT+GGG | - | chr6_3:30155969-30155988 | Msa0947430:CDS | 25.0% |
| !! | GTTTGTTGCTAATTTATTTC+TGG | - | chr6_3:30156145-30156164 | Msa0947430:intron | 25.0% |
| !!! | TATTTTAGAAGCAACTTATC+CGG | - | chr6_3:30156224-30156243 | Msa0947430:intron | 25.0% |
| !!! | GAACTTGTGTTTTTTCTTAA+AGG | - | chr6_3:30156412-30156431 | Msa0947430:intron | 25.0% |
| ! | ATATATTTGGATCACATGTT+AGG | + | chr6_3:30156633-30156652 | None:intergenic | 25.0% |
| ! | AGTCAGCAAAATTTAAATGT+TGG | - | chr6_3:30156802-30156821 | Msa0947430:intron | 25.0% |
| ! | CAAAATTTAAATGTTGGAGT+TGG | - | chr6_3:30156808-30156827 | Msa0947430:intron | 25.0% |
| !!! | ATTCTTTCAAGTACTTTTTC+TGG | - | chr6_3:30156943-30156962 | Msa0947430:intron | 25.0% |
| !!! | TAGTTTTGGATTGTAAAGTT+TGG | + | chr6_3:30157215-30157234 | None:intergenic | 25.0% |
| !! | TACTTTTACATGTATACAAC+AGG | - | chr6_3:30157881-30157900 | Msa0947430:intron | 25.0% |
| !! | TTTTCAATCTTCGAAGATTT+AGG | - | chr6_3:30157906-30157925 | Msa0947430:intron | 25.0% |
| !! | TCAGCAATCATCATTAATTT+TGG | - | chr6_3:30158279-30158298 | Msa0947430:intron | 25.0% |
| !!! | ATCATCATTAATTTTGGAGA+AGG | - | chr6_3:30158285-30158304 | Msa0947430:intron | 25.0% |
| ! | TTCATAGCATCATAATTATC+CGG | - | chr6_3:30158376-30158395 | Msa0947430:intron | 25.0% |
| ! | AGAAAAAGGTAGAGATAAAA+AGG | + | chr6_3:30158403-30158422 | None:intergenic | 25.0% |
| ! | ACTGATTAACATTCTATTAC+AGG | - | chr6_3:30158604-30158623 | Msa0947430:intron | 25.0% |
| ! | TGAGTATACAGTTTATTAAG+TGG | + | chr6_3:30158696-30158715 | None:intergenic | 25.0% |
| !! | TGTGTATTTTATCTGTAAGT+CGG | + | chr6_3:30158912-30158931 | None:intergenic | 25.0% |
| ! | AGATTAGAATATATATCTCC+AGG | + | chr6_3:30158995-30159014 | None:intergenic | 25.0% |
| ! | ATGTATTATAGGGTTCTATT+TGG | - | chr6_3:30159144-30159163 | Msa0947430:CDS | 25.0% |
| ! | GCTGATTAAGTTTATTAATC+AGG | - | chr6_3:30159203-30159222 | Msa0947430:CDS | 25.0% |
| !!! | GTAGATTTTTTTGTATGAGT+AGG | - | chr6_3:30159235-30159254 | Msa0947430:exon | 25.0% |
| ! | TAGAACAACAAAATACTGAT+AGG | + | chr6_3:30159339-30159358 | None:intergenic | 25.0% |
| GATTAATTAACCTGAGAAGA+AGG | + | chr6_3:30152565-30152584 | None:intergenic | 30.0% | |
| TTACGAATTTCCGAAAAAAG+CGG | - | chr6_3:30152828-30152847 | Msa0947430:three_prime_UTR | 30.0% | |
| TATACATGTGTGATGAAGTT+TGG | - | chr6_3:30152949-30152968 | Msa0947430:three_prime_UTR | 30.0% | |
| ATAGCAGAAAGAACAACAAT+CGG | + | chr6_3:30153048-30153067 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCTTTCTGCTAT+GGG | - | chr6_3:30153048-30153067 | Msa0947430:CDS | 30.0% |
| !! | TCGAAGTTGGTATCAAAAAA+TGG | - | chr6_3:30153310-30153329 | Msa0947430:CDS | 30.0% |
| !! | CAATCAAAAGTATCAGTACT+AGG | + | chr6_3:30153409-30153428 | None:intergenic | 30.0% |
| ACATTGAAAGTAATCTTCAG+TGG | - | chr6_3:30153461-30153480 | Msa0947430:intron | 30.0% | |
| TTAACATTGAAAGTCGAAGT+TGG | - | chr6_3:30153576-30153595 | Msa0947430:intron | 30.0% | |
| !! | AGTCGAAGTTGGTATAAATT+AGG | - | chr6_3:30153587-30153606 | Msa0947430:intron | 30.0% |
| ! | ATTAGGCTTAAATGCAGTTT+TGG | - | chr6_3:30153604-30153623 | Msa0947430:intron | 30.0% |
| CAATTGATCTTACTTGATCA+TGG | - | chr6_3:30153760-30153779 | Msa0947430:intron | 30.0% | |
| ATGAAAACAAAGTGGCTATT+TGG | + | chr6_3:30153820-30153839 | None:intergenic | 30.0% | |
| GATCTAACATGAAAACAAAG+TGG | + | chr6_3:30153828-30153847 | None:intergenic | 30.0% | |
| TGGTCAAAATTTGTGAAATG+GGG | - | chr6_3:30153879-30153898 | Msa0947430:intron | 30.0% | |
| AAAATCGCACAATTAGAATC+AGG | - | chr6_3:30153905-30153924 | Msa0947430:intron | 30.0% | |
| AAATCGCACAATTAGAATCA+GGG | - | chr6_3:30153906-30153925 | Msa0947430:intron | 30.0% | |
| !! | TATGTGTCTAGAATCACTTT+TGG | + | chr6_3:30154320-30154339 | None:intergenic | 30.0% |
| TTGTCAAATAGCAGTTATAG+TGG | + | chr6_3:30154496-30154515 | None:intergenic | 30.0% | |
| TGCACACAATATAACATATC+AGG | + | chr6_3:30155042-30155061 | None:intergenic | 30.0% | |
| TCACAACAAAACTAAAGAAG+TGG | + | chr6_3:30155152-30155171 | None:intergenic | 30.0% | |
| TCTGAACATGTGTTTATAAG+TGG | - | chr6_3:30155195-30155214 | Msa0947430:intron | 30.0% | |
| CTGAACATGTGTTTATAAGT+GGG | - | chr6_3:30155196-30155215 | Msa0947430:intron | 30.0% | |
| TCTAATTTAACCCTCAAAAC+CGG | + | chr6_3:30155243-30155262 | None:intergenic | 30.0% | |
| !! | GACCAACCCAAATTTTAAAA+TGG | - | chr6_3:30155261-30155280 | Msa0947430:CDS | 30.0% |
| !!! | CACCATTTTAAAATTTGGGT+TGG | + | chr6_3:30155266-30155285 | None:intergenic | 30.0% |
| ! | ATATGCATTAGTTTCCATGA+TGG | - | chr6_3:30155622-30155641 | Msa0947430:intron | 30.0% |
| GTTTATAAAACACTCATGCA+AGG | + | chr6_3:30155655-30155674 | None:intergenic | 30.0% | |
| ATATAATTTAGCTGTTGCTG+TGG | + | chr6_3:30155677-30155696 | None:intergenic | 30.0% | |
| !!! | GTATGCTTTTTCTTGTGAAT+GGG | + | chr6_3:30155703-30155722 | None:intergenic | 30.0% |
| !!! | TGTATGCTTTTTCTTGTGAA+TGG | + | chr6_3:30155704-30155723 | None:intergenic | 30.0% |
| AAGAAGGTCCAAAATTGATA+AGG | + | chr6_3:30155751-30155770 | None:intergenic | 30.0% | |
| TCTTAATAAATTGGGTGTCA+AGG | - | chr6_3:30155977-30155996 | Msa0947430:CDS | 30.0% | |
| TTAGCAACAAACTATGATCA+GGG | + | chr6_3:30156137-30156156 | None:intergenic | 30.0% | |
| ATTAGCAACAAACTATGATC+AGG | + | chr6_3:30156138-30156157 | None:intergenic | 30.0% | |
| ATAGCATAATTACCTTTCCA+AGG | + | chr6_3:30156314-30156333 | None:intergenic | 30.0% | |
| CATTTCAAAATGGAGACAAA+AGG | - | chr6_3:30156555-30156574 | Msa0947430:intron | 30.0% | |
| ACTTCTGTCTTTAGATTTGT+CGG | - | chr6_3:30157007-30157026 | Msa0947430:intron | 30.0% | |
| !!! | TGTGATTCTTCGATTAGTTT+TGG | + | chr6_3:30157229-30157248 | None:intergenic | 30.0% |
| TTATTGTGTTAAGCAAGACT+TGG | - | chr6_3:30157673-30157692 | Msa0947430:intron | 30.0% | |
| TTGTCTATGTAAGTTCATCA+GGG | + | chr6_3:30158077-30158096 | None:intergenic | 30.0% | |
| TTTGTCTATGTAAGTTCATC+AGG | + | chr6_3:30158078-30158097 | None:intergenic | 30.0% | |
| !! | ATTAGGTGTTACTTGCAATA+TGG | - | chr6_3:30158108-30158127 | Msa0947430:intron | 30.0% |
| !!! | AGATGATGGATCTATTTTGT+AGG | + | chr6_3:30158243-30158262 | None:intergenic | 30.0% |
| TCATAGCATCATAATTATCC+GGG | - | chr6_3:30158377-30158396 | Msa0947430:intron | 30.0% | |
| AAAACAGATTATTCAAGCTG+TGG | + | chr6_3:30158491-30158510 | None:intergenic | 30.0% | |
| ATTGCAGAAGAACTTAATCT+TGG | + | chr6_3:30158542-30158561 | None:intergenic | 30.0% | |
| ! | ATTGGTAGTAAATGATAGTG+AGG | - | chr6_3:30158835-30158854 | Msa0947430:intron | 30.0% |
| TTCCTAAGATGATTTAGCAA+CGG | + | chr6_3:30158948-30158967 | None:intergenic | 30.0% | |
| TGAGCATCAAATATTTATCC+TGG | - | chr6_3:30158974-30158993 | Msa0947430:CDS | 30.0% | |
| TTTATTAATCAGGCTCAACT+GGG | - | chr6_3:30159213-30159232 | Msa0947430:CDS | 30.0% | |
| ! | AGAAGCACGTGATTGAAAAT+GGG | - | chr6_3:30152878-30152897 | Msa0947430:three_prime_UTR | 35.0% |
| !!! | TGGATTGGTTATGAGTTTTC+CGG | - | chr6_3:30153014-30153033 | Msa0947430:CDS | 35.0% |
| ! | GATTGTTGTTCTTTCTGCTA+TGG | - | chr6_3:30153047-30153066 | Msa0947430:CDS | 35.0% |
| ! | AACTACTAACAAGCTTTTGC+TGG | - | chr6_3:30153074-30153093 | Msa0947430:CDS | 35.0% |
| CAATGTTAGATACGTGTCAT+TGG | - | chr6_3:30153199-30153218 | Msa0947430:intron | 35.0% | |
| TTGACATTGAAAGTCGAAGT+TGG | - | chr6_3:30153297-30153316 | Msa0947430:CDS | 35.0% | |
| CAATGTCAATGACATGTATC+TGG | + | chr6_3:30153447-30153466 | None:intergenic | 35.0% | |
| !! | AATTGCGATTCGGTCAAAAT+AGG | + | chr6_3:30153634-30153653 | None:intergenic | 35.0% |
| ! | TTTTGACCGAATCGCAATTT+TGG | - | chr6_3:30153635-30153654 | Msa0947430:intron | 35.0% |
| TGTCACGTCATCAAATTGAA+TGG | - | chr6_3:30153859-30153878 | Msa0947430:intron | 35.0% | |
| ! | TTTTGGCCAAACCACAATTT+TGG | + | chr6_3:30153934-30153953 | None:intergenic | 35.0% |
| ! | AATTGTGGTTTGGCCAAAAT+AGG | - | chr6_3:30153935-30153954 | Msa0947430:CDS | 35.0% |
| ! | ATTGTGGTTTGGCCAAAATA+GGG | - | chr6_3:30153936-30153955 | Msa0947430:CDS | 35.0% |
| CTTCATATTGAAGTCACATC+TGG | - | chr6_3:30154006-30154025 | Msa0947430:CDS | 35.0% | |
| AAATCTGCGTAATGTGTGTT+TGG | - | chr6_3:30154277-30154296 | Msa0947430:intron | 35.0% | |
| !! | GTAATGTGTGTTTGGTTTGA+TGG | - | chr6_3:30154285-30154304 | Msa0947430:intron | 35.0% |
| !! | TTGGTTTTTACATGTTTGGG+TGG | - | chr6_3:30154343-30154362 | Msa0947430:CDS | 35.0% |
| ATTCAAATTCTGCACTGCTA+TGG | - | chr6_3:30154555-30154574 | Msa0947430:intron | 35.0% | |
| TGTTTGTTCTGTTATTAGGC+TGG | - | chr6_3:30154685-30154704 | Msa0947430:intron | 35.0% | |
| TTATAAAAGACCTGCATCTC+AGG | - | chr6_3:30154764-30154783 | Msa0947430:intron | 35.0% | |
| CAGCAATACTTGTAGCATTA+TGG | - | chr6_3:30155060-30155079 | Msa0947430:intron | 35.0% | |
| !! | TTTTGTTGTGAGTCTTGCAA+TGG | - | chr6_3:30155161-30155180 | Msa0947430:intron | 35.0% |
| ATATCGCTAATCTCACAAAC+CGG | - | chr6_3:30155221-30155240 | Msa0947430:intron | 35.0% | |
| ! | CACATCTAGAACTAGACATT+TGG | + | chr6_3:30155345-30155364 | None:intergenic | 35.0% |
| !! | AATGTCTAGTTCTAGATGTG+AGG | - | chr6_3:30155345-30155364 | Msa0947430:intron | 35.0% |
| !! | ATGTCTAGTTCTAGATGTGA+GGG | - | chr6_3:30155346-30155365 | Msa0947430:intron | 35.0% |
| TCCTCGGTTTACAAATTTCT+GGG | + | chr6_3:30155502-30155521 | None:intergenic | 35.0% | |
| GGACCTTCTTATTCTCAATA+TGG | - | chr6_3:30155761-30155780 | Msa0947430:CDS | 35.0% | |
| ! | TAAAATATGTCCAGAGCATC+TGG | - | chr6_3:30155839-30155858 | Msa0947430:intron | 35.0% |
| AAACAACAAGAACACGTACT+TGG | + | chr6_3:30156007-30156026 | None:intergenic | 35.0% | |
| AACTGATGACTTCACAAATG+CGG | - | chr6_3:30156200-30156219 | Msa0947430:intron | 35.0% | |
| ATCATGTGCAGTAACAACAT+TGG | - | chr6_3:30156442-30156461 | Msa0947430:intron | 35.0% | |
| TCATGTGCAGTAACAACATT+GGG | - | chr6_3:30156443-30156462 | Msa0947430:intron | 35.0% | |
| CACAGTTCTGCATTTCAAAA+TGG | - | chr6_3:30156545-30156564 | Msa0947430:intron | 35.0% | |
| TTAATTTCAACCACTTACGC+AGG | - | chr6_3:30156585-30156604 | Msa0947430:intron | 35.0% | |
| ! | TCTGCTTTCGGGTATATATT+TGG | + | chr6_3:30156646-30156665 | None:intergenic | 35.0% |
| AAAATGACACAGGGAAGTAA+AGG | + | chr6_3:30156854-30156873 | None:intergenic | 35.0% | |
| !!! | TTTACTTCCCTGTGTCATTT+TGG | - | chr6_3:30156853-30156872 | Msa0947430:intron | 35.0% |
| !!! | TTACTTCCCTGTGTCATTTT+GGG | - | chr6_3:30156854-30156873 | Msa0947430:intron | 35.0% |
| CAATGTAGAAGCAATGTAGT+CGG | - | chr6_3:30156883-30156902 | Msa0947430:intron | 35.0% | |
| AATGTAGAAGCAATGTAGTC+GGG | - | chr6_3:30156884-30156903 | Msa0947430:intron | 35.0% | |
| TAGTCGGGTATTTCATCTAT+TGG | - | chr6_3:30156899-30156918 | Msa0947430:intron | 35.0% | |
| AGATGGTGAATTATGCACAT+TGG | - | chr6_3:30157142-30157161 | Msa0947430:intron | 35.0% | |
| ATAACGGCATACCAAAAAAG+AGG | + | chr6_3:30157311-30157330 | None:intergenic | 35.0% | |
| AAATATATTCCCCGATTCAC+AGG | - | chr6_3:30157498-30157517 | Msa0947430:intron | 35.0% | |
| ! | TAGGAATTTTTAACCCGTAC+TGG | + | chr6_3:30157568-30157587 | None:intergenic | 35.0% |
| ! | GTTTTCTGTTTACAATCTGC+AGG | - | chr6_3:30157707-30157726 | Msa0947430:intron | 35.0% |
| CATTCAACGACAACAATGAT+AGG | + | chr6_3:30157847-30157866 | None:intergenic | 35.0% | |
| ! | GATCTTTGATCTGTTTGTTG+AGG | - | chr6_3:30158040-30158059 | Msa0947430:intron | 35.0% |
| AAGTTCCTGCTAAACAACAA+AGG | + | chr6_3:30158176-30158195 | None:intergenic | 35.0% | |
| !! | TCTCTAGTTCTTCAACAACA+TGG | + | chr6_3:30158201-30158220 | None:intergenic | 35.0% |
| ATTTCCAATGAGAGAGATGA+TGG | + | chr6_3:30158257-30158276 | None:intergenic | 35.0% | |
| ACTGTTCAAATGATCTCTCA+AGG | - | chr6_3:30158656-30158675 | Msa0947430:intron | 35.0% | |
| TTCCGTTGCTAAATCATCTT+AGG | - | chr6_3:30158943-30158962 | Msa0947430:CDS | 35.0% | |
| GAAGGAGTTGAAAATTTGCA+TGG | + | chr6_3:30159037-30159056 | None:intergenic | 35.0% | |
| ACATTCTCATTTATCAGACG+TGG | + | chr6_3:30159128-30159147 | None:intergenic | 35.0% | |
| GTTTATTAATCAGGCTCAAC+TGG | - | chr6_3:30159212-30159231 | Msa0947430:CDS | 35.0% | |
| GTATGAGTAGGACTCATAAT+CGG | - | chr6_3:30159247-30159266 | Msa0947430:five_prime_UTR | 35.0% | |
| AAGGAGCTTCAGAAGAAAGA+TGG | + | chr6_3:30152546-30152565 | None:intergenic | 40.0% | |
| ! | GAGAAGCACGTGATTGAAAA+TGG | - | chr6_3:30152877-30152896 | Msa0947430:three_prime_UTR | 40.0% |
| ACATGTGTGATGAAGTTTGG+TGG | - | chr6_3:30152952-30152971 | Msa0947430:three_prime_UTR | 40.0% | |
| ! | ATTGGTTATGAGTTTTCCGG+AGG | - | chr6_3:30153017-30153036 | Msa0947430:CDS | 40.0% |
| AGGCAACCAAAATTGCGATT+CGG | + | chr6_3:30153644-30153663 | None:intergenic | 40.0% | |
| CGCTACATCATCAAATCAGA+TGG | + | chr6_3:30153706-30153725 | None:intergenic | 40.0% | |
| GAATCAGGGAACCAAAATTG+TGG | - | chr6_3:30153920-30153939 | Msa0947430:intron | 40.0% | |
| AGGGAACCAAAATTGTGGTT+TGG | - | chr6_3:30153925-30153944 | Msa0947430:intron | 40.0% | |
| ! | TTGTGGTTTGGCCAAAATAG+GGG | - | chr6_3:30153937-30153956 | Msa0947430:CDS | 40.0% |
| !! | GCAGTTTTAGTCCCCTATTT+TGG | + | chr6_3:30153951-30153970 | None:intergenic | 40.0% |
| TGTCTGATAGGTGTAAGCTT+TGG | - | chr6_3:30154029-30154048 | Msa0947430:CDS | 40.0% | |
| TTACCTGCATTTCAGAACTG+TGG | - | chr6_3:30154885-30154904 | Msa0947430:intron | 40.0% | |
| TTCAGAACTGTGGATCAACT+TGG | - | chr6_3:30154895-30154914 | Msa0947430:intron | 40.0% | |
| GTCTTGCAATGGATGAGATA+TGG | - | chr6_3:30155172-30155191 | Msa0947430:intron | 40.0% | |
| !! | AATCTCACAAACCGGTTTTG+AGG | - | chr6_3:30155229-30155248 | Msa0947430:intron | 40.0% |
| !! | ATCTCACAAACCGGTTTTGA+GGG | - | chr6_3:30155230-30155249 | Msa0947430:intron | 40.0% |
| !! | TGTCTAGTTCTAGATGTGAG+GGG | - | chr6_3:30155347-30155366 | Msa0947430:intron | 40.0% |
| GTGTATTGAGAGTCCTACAT+TGG | - | chr6_3:30155371-30155390 | Msa0947430:intron | 40.0% | |
| GGTCATATCTCATCCAATGT+AGG | + | chr6_3:30155387-30155406 | None:intergenic | 40.0% | |
| ACCCAGAAATTTGTAAACCG+AGG | - | chr6_3:30155498-30155517 | Msa0947430:CDS | 40.0% | |
| CTCCTCGGTTTACAAATTTC+TGG | + | chr6_3:30155503-30155522 | None:intergenic | 40.0% | |
| ATATGCCAAGCTTGTAACAC+TGG | - | chr6_3:30155560-30155579 | Msa0947430:intron | 40.0% | |
| TAGAATGTAGCTGCAACTGT+AGG | + | chr6_3:30155603-30155622 | None:intergenic | 40.0% | |
| ! | CACTGGAGCAACTTTTGAAT+GGG | - | chr6_3:30155865-30155884 | Msa0947430:intron | 40.0% |
| ATATGCTGCAAAGATCCTAG+TGG | + | chr6_3:30155958-30155977 | None:intergenic | 40.0% | |
| GAGTTGGACAACATGATTAG+CGG | + | chr6_3:30156083-30156102 | None:intergenic | 40.0% | |
| CTGATGACTTTAGTCAGAGT+TGG | + | chr6_3:30156099-30156118 | None:intergenic | 40.0% | |
| CAACTCTGACTAAAGTCATC+AGG | - | chr6_3:30156097-30156116 | Msa0947430:intron | 40.0% | |
| CCAGTAACAATTGCAATTGC+AGG | + | chr6_3:30156288-30156307 | None:intergenic | 40.0% | |
| CCTGCAATTGCAATTGTTAC+TGG | - | chr6_3:30156285-30156304 | Msa0947430:intron | 40.0% | |
| !! | ACGACAATTGGGAAAGCATT+AGG | - | chr6_3:30156491-30156510 | Msa0947430:intron | 40.0% |
| !! | CGACAATTGGGAAAGCATTA+GGG | - | chr6_3:30156492-30156511 | Msa0947430:intron | 40.0% |
| ! | TGTGTTGATATGCACAAACC+TGG | + | chr6_3:30156529-30156548 | None:intergenic | 40.0% |
| TCAAATGTCAAAAAGGGGAC+AGG | + | chr6_3:30156670-30156689 | None:intergenic | 40.0% | |
| CCTCGTCAAATGTCAAAAAG+GGG | + | chr6_3:30156675-30156694 | None:intergenic | 40.0% | |
| GCCTCGTCAAATGTCAAAAA+GGG | + | chr6_3:30156676-30156695 | None:intergenic | 40.0% | |
| AGCCTCGTCAAATGTCAAAA+AGG | + | chr6_3:30156677-30156696 | None:intergenic | 40.0% | |
| TCAGGTATCATTACATTCCC+TGG | - | chr6_3:30156720-30156739 | Msa0947430:intron | 40.0% | |
| AGAGCTAGATAAGTGAACCA+GGG | + | chr6_3:30156740-30156759 | None:intergenic | 40.0% | |
| AAGAGCTAGATAAGTGAACC+AGG | + | chr6_3:30156741-30156760 | None:intergenic | 40.0% | |
| TCCTACAATGTTGATGTCAG+AGG | - | chr6_3:30156772-30156791 | Msa0947430:intron | 40.0% | |
| TCCTCTGACATCAACATTGT+AGG | + | chr6_3:30156776-30156795 | None:intergenic | 40.0% | |
| !!! | TACTTCCCTGTGTCATTTTG+GGG | - | chr6_3:30156855-30156874 | Msa0947430:intron | 40.0% |
| ACTATCCCCAAAATGACACA+GGG | + | chr6_3:30156863-30156882 | None:intergenic | 40.0% | |
| TCGGGTATTTCATCTATTGG+TGG | - | chr6_3:30156902-30156921 | Msa0947430:intron | 40.0% | |
| CGGGTATTTCATCTATTGGT+GGG | - | chr6_3:30156903-30156922 | Msa0947430:intron | 40.0% | |
| !!! | TTCAAGTACTTTTTCTGGCG+TGG | - | chr6_3:30156948-30156967 | Msa0947430:intron | 40.0% |
| ! | ATTTTCAGTTGGGTCTCTTG+TGG | - | chr6_3:30156981-30157000 | Msa0947430:intron | 40.0% |
| ! | TTTTCAGTTGGGTCTCTTGT+GGG | - | chr6_3:30156982-30157001 | Msa0947430:intron | 40.0% |
| TCTGTCTTTAGATTTGTCGG+TGG | - | chr6_3:30157010-30157029 | Msa0947430:intron | 40.0% | |
| ACACTAATAATCAGCACCAG+AGG | + | chr6_3:30157090-30157109 | None:intergenic | 40.0% | |
| CAGATAACATCCCTTGTACT+GGG | + | chr6_3:30157455-30157474 | None:intergenic | 40.0% | |
| ACAGATAACATCCCTTGTAC+TGG | + | chr6_3:30157456-30157475 | None:intergenic | 40.0% | |
| GAGAAGGTGATATTCCAGTA+CGG | - | chr6_3:30157551-30157570 | Msa0947430:intron | 40.0% | |
| AGAAGGTGATATTCCAGTAC+GGG | - | chr6_3:30157552-30157571 | Msa0947430:intron | 40.0% | |
| CTTGCTCATATCTCTTTCCT+TGG | + | chr6_3:30157620-30157639 | None:intergenic | 40.0% | |
| CAAGGAAAGAGATATGAGCA+AGG | - | chr6_3:30157618-30157637 | Msa0947430:intron | 40.0% | |
| GAAACGTAATGTGACCATGT+TGG | - | chr6_3:30157752-30157771 | Msa0947430:intron | 40.0% | |
| AGTGCTCACTATATCCAACA+TGG | + | chr6_3:30157769-30157788 | None:intergenic | 40.0% | |
| ACAACAATGATAGGTCTGAC+AGG | + | chr6_3:30157838-30157857 | None:intergenic | 40.0% | |
| TAATACAGCAGGCAAGTGTA+AGG | - | chr6_3:30158009-30158028 | Msa0947430:intron | 40.0% | |
| TCTATGTAAGTTCATCAGGG+AGG | + | chr6_3:30158074-30158093 | None:intergenic | 40.0% | |
| !!! | TGTTTTTTGTTTCCCAGCCA+TGG | - | chr6_3:30158131-30158150 | Msa0947430:intron | 40.0% |
| ATTAGAGTTATGCCATGGCT+GGG | + | chr6_3:30158146-30158165 | None:intergenic | 40.0% | |
| TATTAGAGTTATGCCATGGC+TGG | + | chr6_3:30158147-30158166 | None:intergenic | 40.0% | |
| GACGTATTAGAGTTATGCCA+TGG | + | chr6_3:30158151-30158170 | None:intergenic | 40.0% | |
| !! | GTCTTCCTTTGTTGTTTAGC+AGG | - | chr6_3:30158168-30158187 | Msa0947430:intron | 40.0% |
| AGAACTAGAGAAAATCGCTG+TGG | - | chr6_3:30158210-30158229 | Msa0947430:intron | 40.0% | |
| AGATCCATCATCTCTCTCAT+TGG | - | chr6_3:30158250-30158269 | Msa0947430:intron | 40.0% | |
| AAGGTAGAGATAAAAAGGCC+CGG | + | chr6_3:30158398-30158417 | None:intergenic | 40.0% | |
| ! | TCTCTACCTTTTTCTCCATG+TGG | - | chr6_3:30158408-30158427 | Msa0947430:intron | 40.0% |
| ! | CTCTACCTTTTTCTCCATGT+GGG | - | chr6_3:30158409-30158428 | Msa0947430:intron | 40.0% |
| ! | TCTACCTTTTTCTCCATGTG+GGG | - | chr6_3:30158410-30158429 | Msa0947430:intron | 40.0% |
| AACAAATGACATTCCCCACA+TGG | + | chr6_3:30158426-30158445 | None:intergenic | 40.0% | |
| ! | GGAATGTCATTTGTTTACCC+TGG | - | chr6_3:30158431-30158450 | Msa0947430:intron | 40.0% |
| CATTTGAACAGTGACACCAA+GGG | + | chr6_3:30158648-30158667 | None:intergenic | 40.0% | |
| TCATTTGAACAGTGACACCA+AGG | + | chr6_3:30158649-30158668 | None:intergenic | 40.0% | |
| !!! | TTCTCTGTTTTGTTTTCGCC+AGG | - | chr6_3:30158802-30158821 | Msa0947430:intron | 40.0% |
| CTACCAATGAGATATTCACC+TGG | + | chr6_3:30158823-30158842 | None:intergenic | 40.0% | |
| ! | AGTAAATGATAGTGAGGCAG+AGG | - | chr6_3:30158841-30158860 | Msa0947430:intron | 40.0% |
| TATCTGTAAGTCGGAGAACT+CGG | + | chr6_3:30158903-30158922 | None:intergenic | 40.0% | |
| ACATCTCAATCACACAAGGT+TGG | + | chr6_3:30159059-30159078 | None:intergenic | 40.0% | |
| TGCTACATCTCAATCACACA+AGG | + | chr6_3:30159063-30159082 | None:intergenic | 40.0% | |
| GTGTGATTGAGATGTAGCAA+TGG | - | chr6_3:30159064-30159083 | Msa0947430:CDS | 40.0% | |
| CAAGTGTATACAGAAGCTTC+AGG | - | chr6_3:30159094-30159113 | Msa0947430:CDS | 40.0% | |
| TCTCATTTATCAGACGTGGA+GGG | + | chr6_3:30159124-30159143 | None:intergenic | 40.0% | |
| TTCTCATTTATCAGACGTGG+AGG | + | chr6_3:30159125-30159144 | None:intergenic | 40.0% | |
| ATAGGTCTAATGCAAGTGAC+GGG | + | chr6_3:30159321-30159340 | None:intergenic | 40.0% | |
| GATAGGTCTAATGCAAGTGA+CGG | + | chr6_3:30159322-30159341 | None:intergenic | 40.0% | |
| !! | TTCTGAAGCTCCTTCTTCTC+AGG | - | chr6_3:30152552-30152571 | Msa0947430:three_prime_UTR | 45.0% |
| CGAATTTCCGAAAAAAGCGG+CGG | - | chr6_3:30152831-30152850 | Msa0947430:three_prime_UTR | 45.0% | |
| AGCACGTGATTGAAAATGGG+AGG | - | chr6_3:30152881-30152900 | Msa0947430:three_prime_UTR | 45.0% | |
| GATTGAAAATGGGAGGAGTG+TGG | - | chr6_3:30152888-30152907 | Msa0947430:three_prime_UTR | 45.0% | |
| GTTGAGGAAGAAGGAGATGA+AGG | - | chr6_3:30152910-30152929 | Msa0947430:three_prime_UTR | 45.0% | |
| AGGAAGAAGGAGATGAAGGA+GGG | - | chr6_3:30152914-30152933 | Msa0947430:three_prime_UTR | 45.0% | |
| !! | GATGATGGAAGTTGCTGGAT+TGG | - | chr6_3:30152999-30153018 | Msa0947430:CDS | 45.0% |
| ! | TTATGAGTTTTCCGGAGGAG+AGG | - | chr6_3:30153022-30153041 | Msa0947430:CDS | 45.0% |
| GTGAGAGTCTTCAAAATGCG+AGG | + | chr6_3:30153798-30153817 | None:intergenic | 45.0% | |
| AGTCACATCTGGTGTCTGAT+AGG | - | chr6_3:30154017-30154036 | Msa0947430:CDS | 45.0% | |
| !! | CATGTTTGGGTGGTGTTGAT+TGG | - | chr6_3:30154353-30154372 | Msa0947430:CDS | 45.0% |
| GGAGAAAAAGCTGTGAGTTG+CGG | - | chr6_3:30154706-30154725 | Msa0947430:intron | 45.0% | |
| !! | TGCGGTGTTACTAATGTCTC+TGG | - | chr6_3:30154724-30154743 | Msa0947430:intron | 45.0% |
| !! | GATCCACAGTTCTGAAATGC+AGG | + | chr6_3:30154891-30154910 | None:intergenic | 45.0% |
| AACTGTGGATCAACTTGGAG+TGG | - | chr6_3:30154900-30154919 | Msa0947430:intron | 45.0% | |
| CTCGATAACAGATGGCACAA+CGG | + | chr6_3:30155307-30155326 | None:intergenic | 45.0% | |
| CCTAGTGACTCGATAACAGA+TGG | + | chr6_3:30155315-30155334 | None:intergenic | 45.0% | |
| CCATCTGTTATCGAGTCACT+AGG | - | chr6_3:30155312-30155331 | Msa0947430:CDS | 45.0% | |
| TGTAAACCGAGGAGTTTGTC+TGG | - | chr6_3:30155509-30155528 | Msa0947430:intron | 45.0% | |
| GATAGACCAGACAAACTCCT+CGG | + | chr6_3:30155518-30155537 | None:intergenic | 45.0% | |
| GAGGAGTTTGTCTGGTCTAT+CGG | - | chr6_3:30155517-30155536 | Msa0947430:intron | 45.0% | |
| TGTGACCAGTGTTACAAGCT+TGG | + | chr6_3:30155568-30155587 | None:intergenic | 45.0% | |
| TGCAAGGGTGAAATCCATCA+TGG | + | chr6_3:30155639-30155658 | None:intergenic | 45.0% | |
| ! | GCACTGGAGCAACTTTTGAA+TGG | - | chr6_3:30155864-30155883 | Msa0947430:intron | 45.0% |
| AACAAGAACACGTACTTGGC+GGG | + | chr6_3:30156003-30156022 | None:intergenic | 45.0% | |
| CAACAAGAACACGTACTTGG+CGG | + | chr6_3:30156004-30156023 | None:intergenic | 45.0% | |
| ! | CAGTACGACGCATTTGAGAT+TGG | - | chr6_3:30156168-30156187 | Msa0947430:intron | 45.0% |
| TGCAATCTCTTTGCAACAGC+CGG | + | chr6_3:30156246-30156265 | None:intergenic | 45.0% | |
| GCTGTTGCAAAGAGATTGCA+TGG | - | chr6_3:30156246-30156265 | Msa0947430:intron | 45.0% | |
| CAAAGAGATTGCATGGCGAT+TGG | - | chr6_3:30156253-30156272 | Msa0947430:intron | 45.0% | |
| !! | GCAATTGTTACTGGCTTCCT+TGG | - | chr6_3:30156294-30156313 | Msa0947430:intron | 45.0% |
| !! | TGTTACTGGCTTCCTTGGAA+AGG | - | chr6_3:30156299-30156318 | Msa0947430:intron | 45.0% |
| GCAGTAACAACATTGGGTAG+AGG | - | chr6_3:30156449-30156468 | Msa0947430:intron | 45.0% | |
| GTAACAACATTGGGTAGAGG+TGG | - | chr6_3:30156452-30156471 | Msa0947430:intron | 45.0% | |
| ATTAGGGTTACCTGAGATCC+AGG | - | chr6_3:30156508-30156527 | Msa0947430:intron | 45.0% | |
| TATGCACAAACCTGGATCTC+AGG | + | chr6_3:30156521-30156540 | None:intergenic | 45.0% | |
| TTCAACCACTTACGCAGGTA+TGG | - | chr6_3:30156590-30156609 | Msa0947430:intron | 45.0% | |
| CAGGTATGGAAGGATGTTGA+TGG | - | chr6_3:30156604-30156623 | Msa0947430:intron | 45.0% | |
| ! | CCCCTTTTTGACATTTGACG+AGG | - | chr6_3:30156672-30156691 | Msa0947430:intron | 45.0% |
| ! | GTTGGAGTTGGTTATCTGCA+CGG | - | chr6_3:30156820-30156839 | Msa0947430:intron | 45.0% |
| TGGTTATCTGCACGGTTGAA+TGG | - | chr6_3:30156828-30156847 | Msa0947430:intron | 45.0% | |
| GACTATCCCCAAAATGACAC+AGG | + | chr6_3:30156864-30156883 | None:intergenic | 45.0% | |
| !!! | GGTCTAATTTTTGGCACCTC+TGG | - | chr6_3:30157071-30157090 | Msa0947430:intron | 45.0% |
| !!! | TGCTAGCTGCACCTCTTTTT+TGG | - | chr6_3:30157297-30157316 | Msa0947430:intron | 45.0% |
| AAGTGAGTGAACCCAGTACA+AGG | - | chr6_3:30157441-30157460 | Msa0947430:intron | 45.0% | |
| AGTGAGTGAACCCAGTACAA+GGG | - | chr6_3:30157442-30157461 | Msa0947430:intron | 45.0% | |
| TCTATGAGACCTGCTAGAGA+AGG | - | chr6_3:30157535-30157554 | Msa0947430:intron | 45.0% | |
| GGAATATCACCTTCTCTAGC+AGG | + | chr6_3:30157547-30157566 | None:intergenic | 45.0% | |
| GTGTTAAGCAAGACTTGGAC+AGG | - | chr6_3:30157678-30157697 | Msa0947430:intron | 45.0% | |
| TCAGTACGGTTTCCTTGCTA+AGG | - | chr6_3:30157800-30157819 | Msa0947430:intron | 45.0% | |
| CATCAACTCTCACCTTAGCA+AGG | + | chr6_3:30157815-30157834 | None:intergenic | 45.0% | |
| TGTTGTCGTTGAATGCGTTC+CGG | - | chr6_3:30157852-30157871 | Msa0947430:intron | 45.0% | |
| AGTCAGTGTTTCCTTGACGT+TGG | - | chr6_3:30157959-30157978 | Msa0947430:intron | 45.0% | |
| ! | CTTTGATGGATCCAACGTCA+AGG | + | chr6_3:30157973-30157992 | None:intergenic | 45.0% |
| GAGCAGAGAACTAATACAGC+AGG | - | chr6_3:30157998-30158017 | Msa0947430:intron | 45.0% | |
| AGACAAATGCCTGCTCGATT+AGG | - | chr6_3:30158091-30158110 | Msa0947430:intron | 45.0% | |
| CAAGTAACACCTAATCGAGC+AGG | + | chr6_3:30158103-30158122 | None:intergenic | 45.0% | |
| CATTCCCCACATGGAGAAAA+AGG | + | chr6_3:30158417-30158436 | None:intergenic | 45.0% | |
| TTTGTTTACCCTGGATCCCT+TGG | - | chr6_3:30158440-30158459 | Msa0947430:intron | 45.0% | |
| TTGTTTACCCTGGATCCCTT+GGG | - | chr6_3:30158441-30158460 | Msa0947430:intron | 45.0% | |
| TTTCGTGTTCTTCGAACCCT+TGG | - | chr6_3:30158629-30158648 | Msa0947430:intron | 45.0% | |
| GATCTCTCAAGGTGCATCTA+AGG | - | chr6_3:30158667-30158686 | Msa0947430:intron | 45.0% | |
| TCGCCAGGTGAATATCTCAT+TGG | - | chr6_3:30158817-30158836 | Msa0947430:intron | 45.0% | |
| TGAGGCAGAGGAATGTGTAA+GGG | - | chr6_3:30158853-30158872 | Msa0947430:intron | 45.0% | |
| ! | CGGTTTCAAAGAAAGCGTGA+TGG | + | chr6_3:30158883-30158902 | None:intergenic | 45.0% |
| CTCAATCACACAAGGTTGGA+AGG | + | chr6_3:30159055-30159074 | None:intergenic | 45.0% | |
| ! | AGTGGTGGAAGAAGGAGGTT+AGG | + | chr6_3:30152766-30152785 | None:intergenic | 50.0% |
| !!! | ACCTTCACCGCCGCTTTTTT+CGG | + | chr6_3:30152841-30152860 | None:intergenic | 50.0% |
| GAAGGTCACGTGCAATGTGT+TGG | - | chr6_3:30152855-30152874 | Msa0947430:three_prime_UTR | 50.0% | |
| ! | AAATGGGAGGAGTGTGGTTG+AGG | - | chr6_3:30152894-30152913 | Msa0947430:three_prime_UTR | 50.0% |
| ! | AGGAGTGTGGTTGAGGAAGA+AGG | - | chr6_3:30152901-30152920 | Msa0947430:three_prime_UTR | 50.0% |
| GAGGAAGAAGGAGATGAAGG+AGG | - | chr6_3:30152913-30152932 | Msa0947430:three_prime_UTR | 50.0% | |
| !! | GAGAGGATGATGGAAGTTGC+TGG | - | chr6_3:30152994-30153013 | Msa0947430:exon | 50.0% |
| ACTGCTCTTACCTGAGATGC+AGG | + | chr6_3:30154777-30154796 | None:intergenic | 50.0% | |
| ! | TTGGAGAGTGCATGTCCACT+AGG | - | chr6_3:30155940-30155959 | Msa0947430:intron | 50.0% |
| ACCACTTACGCAGGTATGGA+AGG | - | chr6_3:30156594-30156613 | Msa0947430:intron | 50.0% | |
| TCCTTCCATACCTGCGTAAG+TGG | + | chr6_3:30156598-30156617 | None:intergenic | 50.0% | |
| AAGGGGACAGGTTCTGCTTT+CGG | + | chr6_3:30156658-30156677 | None:intergenic | 50.0% | |
| ! | GCTGCTGAGCTAGCTTACTT+TGG | - | chr6_3:30156694-30156713 | Msa0947430:intron | 50.0% |
| !! | GCTAGCTTACTTTGGTGCTC+AGG | - | chr6_3:30156702-30156721 | Msa0947430:intron | 50.0% |
| TAGATTTGTCGGTGGTGCTC+AGG | - | chr6_3:30157018-30157037 | Msa0947430:intron | 50.0% | |
| GATGCAGAACCTGTGAATCG+GGG | + | chr6_3:30157510-30157529 | None:intergenic | 50.0% | |
| GGATGCAGAACCTGTGAATC+GGG | + | chr6_3:30157511-30157530 | None:intergenic | 50.0% | |
| CGGATGCAGAACCTGTGAAT+CGG | + | chr6_3:30157512-30157531 | None:intergenic | 50.0% | |
| CTAGCAGGTCTCATAGACTG+CGG | + | chr6_3:30157532-30157551 | None:intergenic | 50.0% | |
| TTCCTACAACCCGAAAGCTC+CGG | - | chr6_3:30157582-30157601 | Msa0947430:intron | 50.0% | |
| ATAGTGAGCACTCGCATGCT+TGG | - | chr6_3:30157777-30157796 | Msa0947430:intron | 50.0% | |
| ACTCGCATGCTTGGTCAGTA+CGG | - | chr6_3:30157786-30157805 | Msa0947430:intron | 50.0% | |
| CGTTGGATCCATCAAAGCTC+TGG | - | chr6_3:30157976-30157995 | Msa0947430:intron | 50.0% | |
| ! | TCTCTGCTCCAGAGCTTTGA+TGG | + | chr6_3:30157987-30158006 | None:intergenic | 50.0% |
| TGTTTACCCTGGATCCCTTG+GGG | - | chr6_3:30158442-30158461 | Msa0947430:intron | 50.0% | |
| CAAGATCAACAGTGCCCCAA+GGG | + | chr6_3:30158459-30158478 | None:intergenic | 50.0% | |
| TCAAGATCAACAGTGCCCCA+AGG | + | chr6_3:30158460-30158479 | None:intergenic | 50.0% | |
| GTGAGGCAGAGGAATGTGTA+AGG | - | chr6_3:30158852-30158871 | Msa0947430:intron | 50.0% | |
| ! | TGGCAAGTGGTGGAAGAAGG+AGG | + | chr6_3:30152771-30152790 | None:intergenic | 55.0% |
| ! | ACGTGGCAAGTGGTGGAAGA+AGG | + | chr6_3:30152774-30152793 | None:intergenic | 55.0% |
| TTCTTCCACCACTTGCCACG+TGG | - | chr6_3:30152773-30152792 | Msa0947430:three_prime_UTR | 55.0% | |
| TCTATGCTGTTGCTGCCACG+TGG | + | chr6_3:30152791-30152810 | None:intergenic | 55.0% | |
| TCCGAAAAAAGCGGCGGTGA+AGG | - | chr6_3:30152837-30152856 | Msa0947430:three_prime_UTR | 55.0% | |
| TGGTGGTTCGTCAGTTGCGT+CGG | - | chr6_3:30152969-30152988 | Msa0947430:three_prime_UTR | 55.0% | |
| ACAACAATCGGCCTCTCCTC+CGG | + | chr6_3:30153036-30153055 | None:intergenic | 55.0% | |
| ! | TCCAGAGCATCTGGAAGCAC+TGG | - | chr6_3:30155848-30155867 | Msa0947430:intron | 55.0% |
| TCCAGTGCTTCCAGATGCTC+TGG | + | chr6_3:30155852-30155871 | None:intergenic | 55.0% | |
| AGGGGACAGGTTCTGCTTTC+GGG | + | chr6_3:30156657-30156676 | None:intergenic | 55.0% | |
| TCCTACAACCCGAAAGCTCC+GGG | - | chr6_3:30157583-30157602 | Msa0947430:intron | 55.0% | |
| !! | ATGAGAGTGCCCGGAGCTTT+CGG | + | chr6_3:30157595-30157614 | None:intergenic | 55.0% |
| !! | TCCTTGGTGATGAGAGTGCC+CGG | + | chr6_3:30157604-30157623 | None:intergenic | 55.0% |
| TGTTGCTGCCACGTGGCAAG+TGG | + | chr6_3:30152784-30152803 | None:intergenic | 60.0% | |
| TGGTTCGTCAGTTGCGTCGG+CGG | - | chr6_3:30152972-30152991 | Msa0947430:three_prime_UTR | 60.0% | |
| !! | TGAGAGTGCCCGGAGCTTTC+GGG | + | chr6_3:30157594-30157613 | None:intergenic | 60.0% |
| TCCGGGCACTCTCATCACCA+AGG | - | chr6_3:30157600-30157619 | Msa0947430:intron | 60.0% | |
| ACAGTGCCCCAAGGGATCCA+GGG | + | chr6_3:30158451-30158470 | None:intergenic | 60.0% | |
| AACAGTGCCCCAAGGGATCC+AGG | + | chr6_3:30158452-30158471 | None:intergenic | 60.0% | |
| TGCTGCCACGTGGCAAGTGG+TGG | + | chr6_3:30152781-30152800 | None:intergenic | 65.0% | |
| ! | TGCGTCGGCGGAGAGGATGA+TGG | - | chr6_3:30152984-30153003 | Msa0947430:exon | 65.0% |
| !! | GCCCGGAGCTTTCGGGTTGT+AGG | + | chr6_3:30157587-30157606 | None:intergenic | 65.0% |
| ! | CGTCAGTTGCGTCGGCGGAG+AGG | - | chr6_3:30152977-30152996 | Msa0947430:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 30152481 | 30159479 | 30152481 | ID=Msa0947430;Name=Msa0947430 |
| chr6_3 | mRNA | 30152481 | 30159479 | 30152481 | ID=Msa0947430-mRNA-1;Parent=Msa0947430;Name=Msa0947430-mRNA-1;_AED=0.12;_eAED=0.12;_QI=154|0.85|0.93|0.93|0.92|0.86|15|515|576 |
| chr6_3 | exon | 30152481 | 30153136 | 30152481 | ID=Msa0947430-mRNA-1:exon:7998;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30153272 | 30153334 | 30153272 | ID=Msa0947430-mRNA-1:exon:7997;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30153654 | 30153770 | 30153654 | ID=Msa0947430-mRNA-1:exon:7996;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30153935 | 30154057 | 30153935 | ID=Msa0947430-mRNA-1:exon:7995;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30154139 | 30154231 | 30154139 | ID=Msa0947430-mRNA-1:exon:7994;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30154321 | 30154440 | 30154321 | ID=Msa0947430-mRNA-1:exon:7993;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30154921 | 30154971 | 30154921 | ID=Msa0947430-mRNA-1:exon:7992;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30155237 | 30155353 | 30155237 | ID=Msa0947430-mRNA-1:exon:7991;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30155431 | 30155526 | 30155431 | ID=Msa0947430-mRNA-1:exon:7990;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30155640 | 30155789 | 30155640 | ID=Msa0947430-mRNA-1:exon:7989;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30155953 | 30156107 | 30155953 | ID=Msa0947430-mRNA-1:exon:7988;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30157020 | 30157060 | 30157020 | ID=Msa0947430-mRNA-1:exon:7987;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30157175 | 30157257 | 30157175 | ID=Msa0947430-mRNA-1:exon:7986;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30158865 | 30159306 | 30158865 | ID=Msa0947430-mRNA-1:exon:7985;Parent=Msa0947430-mRNA-1 |
| chr6_3 | exon | 30159387 | 30159479 | 30159387 | ID=Msa0947430-mRNA-1:exon:7984;Parent=Msa0947430-mRNA-1 |
| chr6_3 | five_prime_UTR | 30159387 | 30159479 | 30159387 | ID=Msa0947430-mRNA-1:five_prime_utr;Parent=Msa0947430-mRNA-1 |
| chr6_3 | five_prime_UTR | 30159246 | 30159306 | 30159246 | ID=Msa0947430-mRNA-1:five_prime_utr;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30158865 | 30159245 | 30158865 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30157175 | 30157257 | 30157175 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30157020 | 30157060 | 30157020 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30155953 | 30156107 | 30155953 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30155640 | 30155789 | 30155640 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30155431 | 30155526 | 30155431 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30155237 | 30155353 | 30155237 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30154921 | 30154971 | 30154921 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30154321 | 30154440 | 30154321 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30154139 | 30154231 | 30154139 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30153935 | 30154057 | 30153935 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30153654 | 30153770 | 30153654 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30153272 | 30153334 | 30153272 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | CDS | 30152996 | 30153136 | 30152996 | ID=Msa0947430-mRNA-1:cds;Parent=Msa0947430-mRNA-1 |
| chr6_3 | three_prime_UTR | 30152481 | 30152995 | 30152481 | ID=Msa0947430-mRNA-1:three_prime_utr;Parent=Msa0947430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
