AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0705460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705460 MtrunA17_Chr8g0384121 95.660 576 23 1 1 576 1 574 0.0 1116
Msa0705460 MtrunA17_Chr3g0129921 65.468 556 168 9 10 556 14 554 0.0 743
Msa0705460 MtrunA17_Chr8g0345281 37.996 529 285 15 58 558 68 581 6.23e-104 325
Msa0705460 MtrunA17_Chr4g0011771 39.114 519 277 15 50 560 20 507 3.34e-102 318
Msa0705460 MtrunA17_Chr3g0126771 37.245 588 307 19 16 567 37 598 8.44e-102 320
Msa0705460 MtrunA17_Chr4g0011791 38.867 512 261 14 56 555 27 498 1.03e-101 317
Msa0705460 MtrunA17_Chr7g0269541 37.170 530 276 15 59 558 46 548 1.64e-100 315
Msa0705460 MtrunA17_Chr1g0147051 34.804 612 312 20 3 567 37 608 4.07e-100 316
Msa0705460 MtrunA17_Chr7g0269531 36.313 537 280 14 59 555 40 554 2.59e-99 313
Msa0705460 MtrunA17_Chr7g0269521 37.244 537 295 12 59 565 37 561 6.91e-99 311
Msa0705460 MtrunA17_Chr1g0192331 35.946 523 296 13 50 555 17 517 3.16e-98 308
Msa0705460 MtrunA17_Chr4g0069841 38.780 459 237 10 122 565 86 515 5.13e-97 305
Msa0705460 MtrunA17_Chr2g0302021 38.085 470 228 13 122 565 92 524 3.23e-95 301
Msa0705460 MtrunA17_Chr1g0175661 39.121 455 244 11 123 555 104 547 1.51e-94 300
Msa0705460 MtrunA17_Chr4g0011751 39.394 462 236 13 110 558 51 481 2.45e-94 297
Msa0705460 MtrunA17_Chr1g0195301 38.163 490 237 14 102 555 85 544 6.87e-94 298
Msa0705460 MtrunA17_Chr1g0195321 38.163 490 237 14 102 555 85 544 6.87e-94 298
Msa0705460 MtrunA17_Chr7g0272141 33.975 571 319 14 22 568 8 544 7.95e-94 297
Msa0705460 MtrunA17_Chr1g0195331 38.367 490 236 14 102 555 85 544 1.45e-93 297
Msa0705460 MtrunA17_Chr7g0269511 35.294 595 302 19 14 561 1 559 1.68e-92 295
Msa0705460 MtrunA17_Chr4g0069861 37.391 460 246 10 122 565 83 516 1.51e-91 291
Msa0705460 MtrunA17_Chr8g0354911 35.572 551 295 14 60 565 76 611 1.72e-91 293
Msa0705460 MtrunA17_Chr2g0301931 47.079 291 139 5 277 565 14 291 2.09e-91 283
Msa0705460 MtrunA17_Chr8g0391311 34.709 533 283 15 59 558 33 533 3.11e-91 291
Msa0705460 MtrunA17_Chr8g0391291 34.766 535 280 15 59 558 31 531 5.35e-91 290
Msa0705460 MtrunA17_Chr7g0233831 36.311 515 276 16 73 565 70 554 6.61e-91 290
Msa0705460 MtrunA17_Chr1g0195351 37.755 490 237 15 102 555 85 542 1.66e-90 289
Msa0705460 MtrunA17_Chr4g0069891 33.147 537 305 15 58 565 81 592 4.14e-90 289
Msa0705460 MtrunA17_Chr7g0233771 36.620 497 250 16 99 565 92 553 2.11e-89 286
Msa0705460 MtrunA17_Chr2g0295531 35.560 509 282 18 58 551 43 520 6.05e-89 287
Msa0705460 MtrunA17_Chr4g0069881 38.747 431 221 10 148 565 134 534 1.08e-88 284
Msa0705460 MtrunA17_Chr3g0080381 34.046 561 290 16 61 565 91 627 6.58e-87 282
Msa0705460 MtrunA17_Chr8g0354901 35.373 523 295 15 56 558 74 573 2.00e-86 279
Msa0705460 MtrunA17_Chr3g0079341 37.556 450 231 14 126 558 103 519 5.76e-86 276
Msa0705460 MtrunA17_Chr7g0233801 37.166 487 267 16 85 558 85 545 7.34e-86 277
Msa0705460 MtrunA17_Chr7g0272151 31.507 584 341 17 16 560 14 577 9.94e-86 278
Msa0705460 MtrunA17_Chr3g0079361 45.171 321 153 8 246 558 214 519 1.95e-85 275
Msa0705460 MtrunA17_Chr3g0090091 45.062 324 153 9 240 555 211 517 4.82e-85 274
Msa0705460 MtrunA17_Chr3g0079351 34.857 525 289 15 54 558 28 519 5.39e-85 274
Msa0705460 MtrunA17_Chr1g0195311 50.758 264 115 5 296 555 51 303 9.45e-84 264
Msa0705460 MtrunA17_Chr3g0080391 34.682 519 298 17 58 558 71 566 1.64e-83 271
Msa0705460 MtrunA17_Chr1g0192311 31.193 545 323 14 58 574 58 578 6.30e-83 270
Msa0705460 MtrunA17_Chr1g0192281 31.193 545 323 14 58 574 58 578 6.30e-83 270
Msa0705460 MtrunA17_Chr1g0194091 32.778 540 309 17 58 560 41 563 7.19e-83 270
Msa0705460 MtrunA17_Chr4g0018371 35.192 520 294 17 58 558 36 531 1.91e-82 268
Msa0705460 MtrunA17_Chr4g0000121 31.193 545 323 14 58 574 45 565 4.83e-81 265
Msa0705460 MtrunA17_Chr8g0345211 34.470 528 299 17 55 560 74 576 1.29e-79 261
Msa0705460 MtrunA17_Chr1g0192321 31.694 549 314 15 58 566 56 583 1.67e-79 261
Msa0705460 MtrunA17_Chr1g0194081 35.831 427 249 12 151 565 149 562 9.47e-79 259
Msa0705460 MtrunA17_Chr1g0192301 30.459 545 327 14 58 574 63 583 2.12e-77 256
Msa0705460 MtrunA17_Chr4g0067611 34.137 498 277 18 58 531 59 529 3.39e-77 255
Msa0705460 MtrunA17_Chr7g0270691 31.023 577 343 18 11 565 5 548 4.41e-77 254
Msa0705460 MtrunA17_Chr7g0270651 31.638 531 316 15 62 562 46 559 7.05e-76 251
Msa0705460 MtrunA17_Chr2g0295551 33.789 512 287 19 53 539 51 535 1.33e-75 250
Msa0705460 MtrunA17_Chr7g0270661 33.469 493 287 14 96 562 82 559 4.17e-74 246
Msa0705460 MtrunA17_Chr7g0270671 33.469 493 287 14 96 562 82 559 4.17e-74 246
Msa0705460 MtrunA17_Chr2g0302001 46.360 261 129 5 307 565 185 436 4.91e-73 240
Msa0705460 MtrunA17_Chr4g0067601 32.033 487 302 11 58 531 59 529 3.18e-72 242
Msa0705460 MtrunA17_Chr7g0270631 32.860 493 290 13 96 562 70 547 4.93e-70 244
Msa0705460 MtrunA17_Chr7g0270631 30.894 492 295 12 96 552 618 1099 6.30e-61 218
Msa0705460 MtrunA17_Chr8g0380581 35.802 324 196 6 239 560 57 370 5.33e-65 217
Msa0705460 MtrunA17_Chr7g0234711 44.492 236 111 5 338 565 45 268 5.90e-63 208
Msa0705460 MtrunA17_Chr2g0295541 30.144 554 282 20 53 539 51 566 8.05e-63 217
Msa0705460 MtrunA17_Chr5g0437831 36.697 327 186 10 245 565 71 382 4.65e-59 201
Msa0705460 MtrunA17_Chr6g0487101 36.334 311 166 6 256 556 93 381 1.11e-58 200
Msa0705460 MtrunA17_Chr8g0389771 35.455 330 177 8 242 557 72 379 5.02e-57 196
Msa0705460 MtrunA17_Chr7g0258341 33.841 328 193 7 238 557 78 389 7.82e-57 196
Msa0705460 MtrunA17_Chr2g0334111 34.969 326 183 8 244 565 22 322 2.06e-56 192
Msa0705460 MtrunA17_Chr7g0268241 35.913 323 180 9 247 565 50 349 1.58e-55 191
Msa0705460 MtrunA17_Chr7g0271381 27.632 532 341 13 54 569 56 559 4.44e-50 181
Msa0705460 MtrunA17_Chr5g0446301 35.783 313 168 6 255 556 68 358 5.56e-50 176
Msa0705460 MtrunA17_Chr1g0161731 31.776 321 186 7 244 556 45 340 3.56e-48 171
Msa0705460 MtrunA17_Chr1g0194311 31.715 309 180 5 258 557 84 370 1.53e-45 164
Msa0705460 MtrunA17_Chr6g0453551 32.602 319 179 5 243 549 1 295 2.07e-45 162
Msa0705460 MtrunA17_Chr7g0217941 32.787 305 171 7 256 549 14 295 3.25e-44 159
Msa0705460 MtrunA17_Chr5g0399221 31.511 311 180 7 256 555 71 359 2.79e-43 158
Msa0705460 MtrunA17_Chr6g0466951 31.715 309 170 9 256 555 77 353 8.62e-43 157
Msa0705460 MtrunA17_Chr2g0294321 29.836 305 187 5 256 555 64 346 4.46e-39 146
Msa0705460 MtrunA17_Chr6g0466961 31.373 306 175 6 256 555 48 324 7.37e-39 145
Msa0705460 MtrunA17_Chr7g0265201 29.703 303 182 6 258 555 109 385 8.67e-39 146
Msa0705460 MtrunA17_Chr4g0070051 31.193 327 185 10 241 556 47 344 6.47e-38 143
Msa0705460 MtrunA17_Chr4g0037751 30.164 305 186 7 256 555 79 361 4.90e-35 135
Msa0705460 MtrunA17_Chr5g0440871 31.046 306 177 7 255 557 46 320 3.92e-34 132
Msa0705460 MtrunA17_Chr8g0351871 29.747 316 189 6 247 555 33 322 4.00e-34 132
Msa0705460 MtrunA17_Chr2g0299431 38.053 226 124 7 239 459 43 257 4.05e-31 122
Msa0705460 MtrunA17_Chr8g0391261 43.165 139 64 3 429 560 30 160 5.83e-31 118
Msa0705460 MtrunA17_Chr4g0025841 32.296 257 145 7 247 503 37 264 3.10e-30 119
Msa0705460 MtrunA17_Chr5g0420831 27.742 310 187 9 256 555 79 361 5.40e-30 121
Msa0705460 MtrunA17_Chr2g0295851 27.451 306 184 8 256 555 63 336 7.24e-30 120
Msa0705460 MtrunA17_Chr6g0459781 35.912 181 103 5 241 412 6 182 8.63e-27 108
Msa0705460 MtrunA17_Chr5g0440901 36.250 160 84 4 343 502 1 142 4.86e-25 101
Msa0705460 MtrunA17_Chr2g0314691 29.064 203 126 3 353 555 17 201 8.50e-24 99.8
Msa0705460 MtrunA17_Chr5g0437821 37.063 143 81 3 364 505 4 138 2.97e-23 95.9
Msa0705460 MtrunA17_Chr6g0460141 37.143 140 81 3 278 410 5 144 2.18e-21 90.9
Msa0705460 MtrunA17_Chr7g0265161 25.926 243 124 7 325 555 14 212 1.46e-17 82.4
Msa0705460 MtrunA17_Chr5g0440891 34.356 163 95 5 255 416 55 206 1.53e-17 81.6
Msa0705460 MtrunA17_Chr4g0073911 29.944 177 103 5 278 441 36 204 1.19e-15 77.0
Msa0705460 MtrunA17_Chr6g0459791 32.824 131 64 3 431 555 4 116 4.54e-15 72.0
Msa0705460 MtrunA17_Chr7g0234731 46.067 89 45 3 246 334 233 318 3.11e-14 73.9
Msa0705460 MtrunA17_Chr5g0440881 29.333 150 89 2 408 557 9 141 5.04e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705460 AT5G09760.1 66.085 516 164 5 51 558 38 550 0.0 712
Msa0705460 AT5G09760.2 66.085 516 164 5 51 558 64 576 0.0 712
Msa0705460 AT5G64640.1 61.314 548 197 7 25 558 55 601 0.0 687
Msa0705460 AT3G05610.1 37.259 518 284 15 58 555 58 554 4.48e-106 333
Msa0705460 AT5G49180.1 35.965 570 323 15 14 560 14 564 1.14e-105 329
Msa0705460 AT5G27870.1 36.742 528 293 15 51 555 42 551 1.54e-103 328
Msa0705460 AT3G06830.1 35.675 541 281 15 58 560 51 562 2.03e-102 321
Msa0705460 AT3G14310.1 37.455 550 289 17 49 558 50 584 2.34e-102 322
Msa0705460 AT2G45220.1 38.583 508 274 15 57 558 29 504 1.12e-101 317
Msa0705460 AT1G53830.1 36.204 569 302 17 26 558 36 579 4.50e-100 315
Msa0705460 AT4G02330.1 50.309 324 139 9 243 558 254 563 4.02e-99 313
Msa0705460 AT2G26450.1 35.046 545 299 20 42 558 86 603 4.47e-97 308
Msa0705460 AT1G11580.1 48.742 318 148 7 242 556 242 547 1.99e-96 305
Msa0705460 AT1G11580.2 48.742 318 148 7 242 556 263 568 5.02e-96 305
Msa0705460 AT2G43050.1 39.911 451 216 13 126 561 101 511 7.89e-96 302
Msa0705460 AT3G10720.2 34.799 546 302 12 61 565 82 614 1.44e-95 305
Msa0705460 AT1G23200.1 36.496 548 274 17 61 565 37 553 7.30e-95 301
Msa0705460 AT1G53840.1 35.283 547 302 17 37 555 54 576 2.20e-94 300
Msa0705460 AT3G60730.1 36.727 501 272 13 81 555 27 508 2.16e-93 296
Msa0705460 AT4G00190.1 36.257 513 265 15 60 560 6 468 5.25e-93 293
Msa0705460 AT3G05620.1 45.482 332 150 7 240 565 234 540 1.49e-92 295
Msa0705460 AT3G49220.1 34.856 591 319 19 6 567 44 597 5.60e-92 295
Msa0705460 AT5G53370.1 34.812 586 314 22 17 568 36 587 1.30e-91 293
Msa0705460 AT5G53370.2 35.935 551 295 20 48 568 101 623 1.89e-91 294
Msa0705460 AT3G49220.3 34.856 591 319 19 6 567 89 642 2.32e-91 294
Msa0705460 AT5G04970.1 34.552 547 308 12 61 568 87 622 4.92e-91 293
Msa0705460 AT3G10710.1 34.387 538 306 16 45 565 53 560 1.08e-90 290
Msa0705460 AT2G26440.1 34.821 560 282 16 48 565 28 546 1.40e-90 290
Msa0705460 AT4G33220.2 46.505 329 153 8 244 565 89 401 4.31e-90 284
Msa0705460 AT1G02810.1 35.017 594 295 20 17 557 8 563 5.02e-90 289
Msa0705460 AT4G33230.1 35.728 529 285 18 58 557 95 597 1.74e-89 288
Msa0705460 AT2G47550.1 37.568 551 282 18 46 555 18 547 3.38e-89 286
Msa0705460 AT4G33220.1 46.505 329 153 8 244 565 210 522 7.63e-89 284
Msa0705460 AT3G43270.1 37.573 511 262 18 77 561 41 520 1.43e-88 284
Msa0705460 AT5G04960.1 33.080 526 294 14 58 560 68 558 3.61e-88 284
Msa0705460 AT3G59010.1 36.166 506 285 14 63 558 43 520 1.06e-87 281
Msa0705460 AT5G20860.2 34.915 527 290 18 56 558 33 530 1.05e-85 276
Msa0705460 AT4G02320.1 33.984 512 262 16 83 560 43 512 2.01e-81 265
Msa0705460 AT3G10720.1 47.566 267 129 4 301 565 1 258 2.55e-80 253
Msa0705460 AT3G14300.1 34.010 591 315 22 2 555 406 958 3.18e-80 271
Msa0705460 AT5G51490.1 44.127 315 161 6 246 555 221 525 2.48e-79 259
Msa0705460 AT4G02300.1 43.949 314 160 6 256 565 230 531 2.10e-78 257
Msa0705460 AT5G51500.1 43.438 320 166 7 246 560 225 534 1.95e-77 255
Msa0705460 AT4G15980.1 41.250 320 175 5 243 560 388 696 1.45e-75 254
Msa0705460 AT3G47400.1 42.424 330 174 8 241 565 275 593 2.93e-75 251
Msa0705460 AT4G15980.2 41.250 320 175 5 243 560 398 706 3.16e-75 253
Msa0705460 AT3G27980.1 41.896 327 165 8 246 565 188 496 1.02e-74 246
Msa0705460 AT1G11370.1 47.656 256 122 5 246 501 45 288 5.34e-74 238
Msa0705460 AT1G11590.1 40.483 331 172 8 242 565 211 523 2.02e-71 238
Msa0705460 AT4G03930.1 40.244 328 177 7 242 565 211 523 5.07e-71 238
Msa0705460 AT5G20860.1 33.133 498 254 16 56 531 33 473 1.89e-68 230
Msa0705460 AT2G47030.1 31.272 566 312 18 58 565 41 587 2.64e-67 229
Msa0705460 AT3G62170.1 41.875 320 172 7 249 565 279 587 2.64e-67 229
Msa0705460 AT2G47040.1 31.524 571 311 18 58 565 41 594 5.55e-67 228
Msa0705460 AT1G05310.1 35.873 315 178 6 254 560 95 393 5.77e-57 196
Msa0705460 AT5G19730.1 34.557 327 180 6 242 556 78 382 7.38e-56 193
Msa0705460 AT2G21610.1 31.457 302 181 5 255 556 58 333 9.03e-49 173
Msa0705460 AT2G21610.2 31.457 302 181 5 255 556 63 338 1.18e-48 173
Msa0705460 AT5G55590.1 35.714 308 165 7 260 556 94 379 4.18e-47 169
Msa0705460 AT3G29090.1 33.115 305 170 5 256 549 15 296 3.86e-46 165
Msa0705460 AT5G47500.1 32.039 309 177 7 258 555 71 357 1.79e-45 164
Msa0705460 AT2G36710.1 31.889 323 192 6 243 560 91 390 1.89e-45 166
Msa0705460 AT3G17060.1 30.945 307 183 6 255 555 53 336 6.04e-44 160
Msa0705460 AT3G24130.1 32.278 316 183 7 256 562 42 335 8.95e-44 159
Msa0705460 AT2G36700.1 32.911 316 180 7 249 555 41 333 1.90e-43 158
Msa0705460 AT5G18990.1 32.903 310 177 5 256 556 37 324 3.49e-42 155
Msa0705460 AT5G55590.2 38.189 254 124 7 260 502 94 325 1.77e-41 153
Msa0705460 AT2G19150.1 32.441 299 184 5 258 555 51 332 2.54e-40 150
Msa0705460 AT5G61680.1 29.846 325 196 7 240 555 57 358 2.61e-39 147
Msa0705460 AT2G47280.1 31.922 307 180 7 256 555 43 327 5.45e-39 146
Msa0705460 AT5G07430.1 31.068 309 184 7 251 555 72 355 6.52e-39 146
Msa0705460 AT5G26810.1 30.124 322 200 6 242 555 29 333 1.88e-38 145
Msa0705460 AT5G07410.1 28.065 310 192 7 251 555 72 355 2.22e-37 142
Msa0705460 AT1G69940.1 28.065 310 192 7 251 555 72 355 3.47e-37 142
Msa0705460 AT5G07420.1 28.527 319 201 6 241 555 60 355 1.44e-34 134
Msa0705460 AT2G19150.2 33.333 246 146 5 258 502 51 279 6.55e-33 128
Msa0705460 AT1G44980.1 39.655 174 101 3 242 415 73 242 1.76e-28 114
Msa0705460 AT3G49220.2 27.684 354 210 16 6 339 89 416 3.34e-21 96.7

Find 203 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAGAACTGTTTGATTAA+TGG 0.170821 4_4:-78143913 Msa0705460:CDS
TGATGGCGGATTGGAGAATT+TGG 0.187737 4_4:+78145627 None:intergenic
TGGAAAGCGGGTTGCTTTAC+AGG 0.191752 4_4:+78145700 None:intergenic
CCACCGAGCGCGACGGTTTA+TGG 0.218919 4_4:-78145232 Msa0705460:CDS
GTTATTATTGTATTAATAAA+TGG 0.226967 4_4:+78143466 None:intergenic
ATAGGAGGCATCAGTAAAAT+AGG 0.229442 4_4:-78143537 Msa0705460:exon
ATTTGGAGAGCGGTGGGATT+TGG 0.237129 4_4:+78145644 None:intergenic
AGGGAGAGGGAGTGGGTTGG+TGG 0.252167 4_4:+78145765 None:intergenic
CGGTGGGATTTGGAGGGATA+TGG 0.255325 4_4:+78145654 None:intergenic
TGTATGGGGCAATTTGAAAT+TGG 0.267963 4_4:-78143332 Msa0705460:three_prime_UTR
ATTTCAATAGCAATCGAAAA+AGG 0.268506 4_4:-78143434 Msa0705460:three_prime_UTR
GTTGGTGGTGGTTGTGGTTG+TGG 0.268522 4_4:+78145780 None:intergenic
AGTTGTTATTGCGAGTTTAA+TGG 0.277680 4_4:+78145871 None:intergenic
GTGTGTCGTTGGCGTATTTC+AGG 0.277759 4_4:+78145375 None:intergenic
GCACTTAAGACACTTTATTA+TGG 0.281863 4_4:-78143733 Msa0705460:CDS
TTCCATTAATCAAACAGTTC+TGG 0.295517 4_4:+78143911 None:intergenic
GAGTGGGTTGGTGGTGGTTG+TGG 0.298767 4_4:+78145774 None:intergenic
TATGGAGAATTTGAGAATAC+TGG 0.319097 4_4:-78143715 Msa0705460:CDS
TATATGTTGGCAGCGGTTCT+TGG 0.320405 4_4:-78144270 Msa0705460:intron
GTTGTTATTGCGAGTTTAAT+GGG 0.330020 4_4:+78145872 None:intergenic
TCCAACCTTGAGGTGTAATA+AGG 0.337595 4_4:+78143776 None:intergenic
GAGAGGGAGTGGGTTGGTGG+TGG 0.348554 4_4:+78145768 None:intergenic
GAGTTTAATGGGTTTGTTCA+TGG 0.360107 4_4:+78145883 None:intergenic
GCATTGTTCTCACCCTTCTC+TGG 0.360849 4_4:+78143985 None:intergenic
TTGGATCTCTGAGCCGGCGT+TGG 0.373456 4_4:+78145727 None:intergenic
GGTGTCTAGCATAGGGATTC+CGG 0.374862 4_4:-78145183 Msa0705460:CDS
TGCGGCATGATTTGTAGAAT+TGG 0.382944 4_4:+78144094 None:intergenic
TAGGAGGCATCAGTAAAATA+GGG 0.389338 4_4:-78143536 Msa0705460:exon
AATGGGTTTGTTCATGGTTG+TGG 0.389877 4_4:+78145889 None:intergenic
TTATGGCAGGCGACTGGATC+GGG 0.393179 4_4:-78145215 Msa0705460:CDS
ATACAGCAATTGTGTATGTT+TGG 0.397705 4_4:+78145921 None:intergenic
GTGTACTTGTGCAACACTTT+TGG 0.398459 4_4:-78143237 Msa0705460:three_prime_UTR
CGGAGGAGAGAGTGATGAAA+AGG 0.400293 4_4:+78145813 None:intergenic
GCCGGATGTTACGGTGTGTA+AGG 0.401504 4_4:-78145150 Msa0705460:CDS
TTCCCGTCAACGCCGTTATC+CGG 0.404722 4_4:+78145077 None:intergenic
ATATTTCTTGCATTAAGAAA+TGG 0.405081 4_4:-78143298 Msa0705460:three_prime_UTR
CACTTTATCTAACCTTCCCT+TGG 0.409764 4_4:+78143401 None:intergenic
GGTTCTTGGCGATGGATTCA+TGG 0.410206 4_4:-78144256 Msa0705460:CDS
GCCACTGCTTGGTGTGCATC+AGG 0.413544 4_4:+78144201 None:intergenic
ACATCCGGCGTCAGCTTTGC+CGG 0.417143 4_4:+78145164 None:intergenic
AAAGAGTCCCACTCAATGTA+TGG 0.418443 4_4:-78143348 Msa0705460:three_prime_UTR
ATCGGGAAGACGGTTATTAC+CGG 0.426119 4_4:-78144963 Msa0705460:CDS
CGTTACTAGAGAGGGTTTCA+AGG 0.426351 4_4:+78145318 None:intergenic
ATTTGTCTCAGAGGGTGACT+TGG 0.427451 4_4:-78143681 Msa0705460:CDS
CTGGCCCACATTAGCAGAAC+CGG 0.431686 4_4:+78144944 None:intergenic
TGGAGAGCGGTGGGATTTGG+AGG 0.434100 4_4:+78145647 None:intergenic
TACAAATCATGCCGCATTGT+AGG 0.434437 4_4:-78144087 Msa0705460:CDS
GGATTGTGCGGTTACGAGAT+TGG 0.434680 4_4:+78145592 None:intergenic
CAGGCGACTGGATCGGGAGG+AGG 0.442345 4_4:-78145209 Msa0705460:CDS
TACACCAACTTTACTACATC+AGG 0.445150 4_4:+78143255 None:intergenic
CCGTCGCGCTCGGTGGTTGG+CGG 0.446645 4_4:+78145239 None:intergenic
TATTACCGGTTCTGCTAATG+TGG 0.450338 4_4:-78144949 Msa0705460:CDS
GCGCCGGATAACGGCGTTGA+CGG 0.451266 4_4:-78145080 Msa0705460:CDS
GGGAGGGAGAGGGAGTGGGT+TGG 0.451762 4_4:+78145762 None:intergenic
GTGTGTAAGGGAGGGGAGAA+GGG 0.454165 4_4:-78145137 Msa0705460:CDS
CGCAATAACAACTCTCTACA+TGG 0.455865 4_4:-78145861 Msa0705460:CDS
ATTTCATTCAAGGAGGTGAA+TGG 0.457694 4_4:-78143612 Msa0705460:CDS
GGTGTGTAAGGGAGGGGAGA+AGG 0.458483 4_4:-78145138 Msa0705460:CDS
TGGATCTCTGAGCCGGCGTT+GGG 0.458662 4_4:+78145728 None:intergenic
CACCTCAAGGTTGGATGCCA+TGG 0.459558 4_4:-78143768 Msa0705460:CDS
GTTAATGCTGCGCCGGATAA+CGG 0.465434 4_4:-78145089 Msa0705460:CDS
AACCGCACAATCCATGGTTA+AGG 0.466294 4_4:-78145582 Msa0705460:CDS
TATCAAAGAAGGGGTTTATG+AGG 0.467273 4_4:-78145039 Msa0705460:CDS
AAAGCTGACGCCGGATGTTA+CGG 0.470922 4_4:-78145159 Msa0705460:CDS
TGGTAGAAGTAAATTACAAA+GGG 0.471086 4_4:+78143486 None:intergenic
ACAAATCCTGTACTCTGTGC+AGG 0.473024 4_4:+78143937 None:intergenic
CGCCGGATAACGGCGTTGAC+GGG 0.474083 4_4:-78145079 Msa0705460:CDS
ATGAGAGGTTGATGGCGGAT+TGG 0.475351 4_4:+78145618 None:intergenic
AAACCGTCGCGCTCGGTGGT+TGG 0.479503 4_4:+78145236 None:intergenic
ATTCGTTAGTATTTCGATGC+AGG 0.479611 4_4:+78145508 None:intergenic
GGGTTTATGAGGAAACCGTT+AGG 0.480051 4_4:-78145028 Msa0705460:CDS
AGAGTTGTAAGTAGTCATTC+CGG 0.480367 4_4:+78144920 None:intergenic
TTTGTTATATATATCAAAGA+AGG 0.481343 4_4:-78145050 Msa0705460:CDS
CTGCCATAAACCGTCGCGCT+CGG 0.481421 4_4:+78145229 None:intergenic
TTGGCAGCGGTTCTTGGCGA+TGG 0.482288 4_4:-78144264 Msa0705460:intron
TTGTTATATATATCAAAGAA+GGG 0.484961 4_4:-78145049 Msa0705460:CDS
ATAACGGCGTTGACGGGAAG+AGG 0.486195 4_4:-78145073 Msa0705460:CDS
TCTGCTAATGTGGGCCAGCC+CGG 0.487185 4_4:-78144939 Msa0705460:CDS
TCCTTATTACACCTCAAGGT+TGG 0.490392 4_4:-78143777 Msa0705460:CDS
TAGTATTTCGATGCAGGTGG+TGG 0.490505 4_4:+78145514 None:intergenic
GTTGTGGTGGCGAGTGGCGG+AGG 0.491149 4_4:+78145796 None:intergenic
GGTGGGATTTGGAGGGATAT+GGG 0.492141 4_4:+78145655 None:intergenic
GGCTGTTCCAGCAGTCGTAC+TGG 0.493558 4_4:+78145396 None:intergenic
TGAGCCGGCGTTGGGAGAAA+CGG 0.495522 4_4:+78145736 None:intergenic
CTTCCAAGACTGTCAAATCC+TGG 0.495802 4_4:-78144028 Msa0705460:CDS
GGAGGATCGGTGTCTAGCAT+AGG 0.496931 4_4:-78145191 Msa0705460:CDS
GGTGGTGGTTGTGGTTGTGG+TGG 0.499047 4_4:+78145783 None:intergenic
CCCTTACACACCGTAACATC+CGG 0.499910 4_4:+78145149 None:intergenic
CTCTAGTAACGCTCTTGCCA+TGG 0.500275 4_4:-78145306 Msa0705460:CDS
GGGTTGCTTTACAGGCTTGT+TGG 0.502770 4_4:+78145708 None:intergenic
TGGCAGCGACGGTACGGTTA+CGG 0.505101 4_4:+78145534 None:intergenic
GTGGTTGTGGTGGCGAGTGG+CGG 0.505600 4_4:+78145793 None:intergenic
TCAGCGGAGAATTTCATTCA+AGG 0.506052 4_4:-78143622 Msa0705460:CDS
ACCGACCCTGCACAGAGTAC+AGG 0.506536 4_4:-78143943 Msa0705460:CDS
GACTGGATCGGGAGGAGGAT+CGG 0.506783 4_4:-78145204 Msa0705460:CDS
GAGTTGTAAGTAGTCATTCC+GGG 0.507079 4_4:+78144921 None:intergenic
GGTTTATGAGGAAACCGTTA+GGG 0.507474 4_4:-78145027 Msa0705460:CDS
ACCGACAGCGTGTGTGTCGT+TGG 0.507485 4_4:+78145364 None:intergenic
TTCTCTGGCTTGAGTTGTCT+AGG 0.508423 4_4:+78144000 None:intergenic
GAAGTCCTTATTACACCTCA+AGG 0.509599 4_4:-78143781 Msa0705460:CDS
TGGAGAATTTGGAGAGCGGT+GGG 0.512568 4_4:+78145638 None:intergenic
GGAGAGCGGTGGGATTTGGA+GGG 0.515066 4_4:+78145648 None:intergenic
GAACCAGGATTTGACAGTCT+TGG 0.515146 4_4:+78144025 None:intergenic
GGCGTTGGGAGAAACGGAGG+GGG 0.517497 4_4:+78145742 None:intergenic
TGGGACTCTTTCTAAGTATG+TGG 0.518936 4_4:+78143360 None:intergenic
TAGCTTACCAGTACGACTGC+TGG 0.519146 4_4:-78145403 Msa0705460:CDS
TCCATGTGTTAAAACGTCGT+TGG 0.519152 4_4:+78145463 None:intergenic
ATTGGTAGATGAGAGGTTGA+TGG 0.520863 4_4:+78145610 None:intergenic
TCTCGTAACCGCACAATCCA+TGG 0.524692 4_4:-78145588 Msa0705460:CDS
CTAATCTGAATGCCACTGCT+TGG 0.525437 4_4:+78144190 None:intergenic
GACGGTTTATGGCAGGCGAC+TGG 0.528436 4_4:-78145221 Msa0705460:CDS
TTCGCATTGTTGTGGAAAGC+GGG 0.530551 4_4:+78145688 None:intergenic
GGAGTCATCACAATACTCAT+AGG 0.531625 4_4:-78143555 Msa0705460:CDS
TGGTTCTGATTTGTCTCAGA+GGG 0.533614 4_4:-78143689 Msa0705460:CDS
AAGAGTCCCACTCAATGTAT+GGG 0.541468 4_4:-78143347 Msa0705460:three_prime_UTR
ATGGTAGAAGTAAATTACAA+AGG 0.542667 4_4:+78143485 None:intergenic
TTGGAGAATTTGGAGAGCGG+TGG 0.547174 4_4:+78145637 None:intergenic
AACAATGCCATCACAGCTCA+TGG 0.547324 4_4:-78143970 Msa0705460:CDS
GGCAAGAGCGTTACTAGAGA+GGG 0.548464 4_4:+78145310 None:intergenic
TGAGTTGTCTAGGACGAACC+AGG 0.550190 4_4:+78144010 None:intergenic
TAATGGAACTGAGGATTACA+TGG 0.550296 4_4:-78143896 Msa0705460:CDS
GGAAGCAGTTAATGCTGCGC+CGG 0.550388 4_4:-78145096 Msa0705460:CDS
GTTGTGGTTGTGGTGGCGAG+TGG 0.550641 4_4:+78145790 None:intergenic
GGTTCTACCATGAGCTGTGA+TGG 0.554105 4_4:+78143963 None:intergenic
GATGTTACGGTGTGTAAGGG+AGG 0.555539 4_4:-78145146 Msa0705460:CDS
GAATTTGAGAATACTGGTGC+TGG 0.555979 4_4:-78143709 Msa0705460:CDS
GGAAACCGTTAGGGTTCCGT+TGG 0.557005 4_4:-78145018 Msa0705460:CDS
CGAGCGCGACGGTTTATGGC+AGG 0.557285 4_4:-78145228 Msa0705460:CDS
ACCACGTTTCTCTTCTCCAA+CGG 0.557929 4_4:+78145002 None:intergenic
AGTGATGATTCGCATTGTTG+TGG 0.559604 4_4:+78145680 None:intergenic
AAATTGCCCCATACATTGAG+TGG 0.564468 4_4:+78143340 None:intergenic
ATTCGCATTGTTGTGGAAAG+CGG 0.565903 4_4:+78145687 None:intergenic
CCGGCGTTGGGAGAAACGGA+GGG 0.566896 4_4:+78145740 None:intergenic
CTTCTCCAACGGAACCCTAA+CGG 0.568649 4_4:+78145013 None:intergenic
TAACTCGACACATGTTCAGC+GGG 0.570786 4_4:+78143646 None:intergenic
AAAATTATTTGGGAAGGCCA+TGG 0.571456 4_4:-78143843 Msa0705460:CDS
AGTTATCAGCACATCGTGGT+AGG 0.571556 4_4:-78143576 Msa0705460:CDS
TGTTACGGTGTGTAAGGGAG+GGG 0.572525 4_4:-78145144 Msa0705460:CDS
CGTTAGTATTTCGATGCAGG+TGG 0.572756 4_4:+78145511 None:intergenic
TTTATGGCAGGCGACTGGAT+CGG 0.572945 4_4:-78145216 Msa0705460:CDS
AAATCAAAGACGCTCGAGCA+TGG 0.573761 4_4:-78145439 Msa0705460:CDS
CAATTTCTAGAGTGGTTGTG+TGG 0.575226 4_4:-78143118 None:intergenic
AGGTGGTGGCAGCGACGGTA+CGG 0.575966 4_4:+78145528 None:intergenic
GAGGATCGGTGTCTAGCATA+GGG 0.576950 4_4:-78145190 Msa0705460:CDS
GATGCAGGTGGTGGCAGCGA+CGG 0.578819 4_4:+78145523 None:intergenic
CCATAAACCGTCGCGCTCGG+TGG 0.579333 4_4:+78145232 None:intergenic
TAGACAACTCAAGCCAGAGA+AGG 0.581118 4_4:-78143998 Msa0705460:CDS
GTTCTAGAATACTCCTTCCA+TGG 0.582820 4_4:+78143826 None:intergenic
TGTAAGTAGTCATTCCGGGC+TGG 0.582837 4_4:+78144925 None:intergenic
CTGGTTCTGATTTGTCTCAG+AGG 0.582934 4_4:-78143690 Msa0705460:CDS
GGCTTGTTGGATCTCTGAGC+CGG 0.589953 4_4:+78145721 None:intergenic
AGGTGATGGAATCGGGAAGA+CGG 0.589955 4_4:-78144973 Msa0705460:CDS
GGTAGATGAGAGGTTGATGG+CGG 0.590167 4_4:+78145613 None:intergenic
TCCTGTACTCTGTGCAGGGT+CGG 0.591729 4_4:+78143942 None:intergenic
GCCGGCGTTGGGAGAAACGG+AGG 0.593649 4_4:+78145739 None:intergenic
TGGCAAGAGCGTTACTAGAG+AGG 0.593826 4_4:+78145309 None:intergenic
CCGGATGTTACGGTGTGTAA+GGG 0.595085 4_4:-78145149 Msa0705460:CDS
TGGCGATGGATTCATGGCAA+AGG 0.597408 4_4:-78144250 Msa0705460:CDS
TTATTTGGGAAGGCCATGGA+AGG 0.597634 4_4:-78143839 Msa0705460:CDS
TGGCAGGCGACTGGATCGGG+AGG 0.597640 4_4:-78145212 Msa0705460:CDS
CTGTTTGATTAATGGAACTG+AGG 0.603136 4_4:-78143905 Msa0705460:CDS
ATGTTACGGTGTGTAAGGGA+GGG 0.603233 4_4:-78145145 Msa0705460:CDS
AGACAACTCAAGCCAGAGAA+GGG 0.603890 4_4:-78143997 Msa0705460:CDS
GTGACCTGATGTAGTAAAGT+TGG 0.604212 4_4:-78143259 Msa0705460:three_prime_UTR
CAAATCCTGTACTCTGTGCA+GGG 0.606314 4_4:+78143938 None:intergenic
CCGCCAACCACCGAGCGCGA+CGG 0.609123 4_4:-78145239 Msa0705460:CDS
GCCAACGACACACACGCTGT+CGG 0.610858 4_4:-78145365 Msa0705460:CDS
ATTACCGGTTCTGCTAATGT+GGG 0.611976 4_4:-78144948 Msa0705460:CDS
AGCCTTAACCATGGATTGTG+CGG 0.612738 4_4:+78145580 None:intergenic
GTCATCACAATACTCATAGG+AGG 0.614425 4_4:-78143552 Msa0705460:CDS
AATTGCCCCATACATTGAGT+GGG 0.616087 4_4:+78143341 None:intergenic
GTTACTAGAGAGGGTTTCAA+GGG 0.617462 4_4:+78145319 None:intergenic
GGAGAAGGGTTGTTATAAGA+CGG 0.618703 4_4:-78145123 Msa0705460:CDS
ATCTAGAATAGCCTTAACCA+TGG 0.619598 4_4:+78145571 None:intergenic
AGTGCAAAGTCACCACTCCA+TGG 0.621333 4_4:+78143751 None:intergenic
TCCTGATGCACACCAAGCAG+TGG 0.624479 4_4:-78144202 Msa0705460:CDS
TGTTATATATATCAAAGAAG+GGG 0.624851 4_4:-78145048 Msa0705460:CDS
AGAAGCTTAGCATAACATAG+TGG 0.630188 4_4:+78143179 None:intergenic
TTACGAGATTGGTAGATGAG+AGG 0.632651 4_4:+78145603 None:intergenic
AGGAGGCATCAGTAAAATAG+GGG 0.635064 4_4:-78143535 Msa0705460:exon
CCCTCCGTTTCTCCCAACGC+CGG 0.643281 4_4:-78145740 Msa0705460:CDS
GCAGTCGTACTGGTAAGCTA+AGG 0.643787 4_4:+78145406 None:intergenic
ATGGAAAAGACACGTCGTTG+TGG 0.643842 4_4:-78145265 Msa0705460:CDS
GATTCCGGCAAAGCTGACGC+CGG 0.648190 4_4:-78145168 Msa0705460:CDS
CTCCATGGCATCCAACCTTG+AGG 0.652340 4_4:+78143766 None:intergenic
GGGTTGTTATAAGACGGTGC+AGG 0.652998 4_4:-78145117 Msa0705460:CDS
CTAACGATCGAAAACACAGC+AGG 0.657735 4_4:-78144225 Msa0705460:CDS
AGAGTCCCACTCAATGTATG+GGG 0.659178 4_4:-78143346 Msa0705460:three_prime_UTR
GTCGTACTGGTAAGCTAAGG+CGG 0.661087 4_4:+78145409 None:intergenic
ACTTACAACTCTGCCACCGT+AGG 0.667310 4_4:-78144909 Msa0705460:intron
GCGGAGAATTTCATTCAAGG+AGG 0.669409 4_4:-78143619 Msa0705460:CDS
CGGCGTTGGGAGAAACGGAG+GGG 0.673050 4_4:+78145741 None:intergenic
ATAACTCGACACATGTTCAG+CGG 0.675019 4_4:+78143645 None:intergenic
GGTACGGTTACGGCTAGCTG+AGG 0.696882 4_4:+78145544 None:intergenic
CAAGGTTGGATGCCATGGAG+TGG 0.698097 4_4:-78143763 Msa0705460:CDS
GGATTGGAGAATTTGGAGAG+CGG 0.706980 4_4:+78145634 None:intergenic
ACATGTGTCGAGTTATTCAG+CGG 0.711795 4_4:-78143638 Msa0705460:CDS
AATCTACATTGCCTACAATG+CGG 0.720239 4_4:+78144076 None:intergenic
GTACTGGTAAGCTAAGGCGG+CGG 0.750479 4_4:+78145412 None:intergenic
TCCGTTGGAGAAGAGAAACG+TGG 0.756065 4_4:-78145003 Msa0705460:CDS
TCTCAGTTATCAGCACATCG+TGG 0.761406 4_4:-78143580 Msa0705460:CDS
AACGTCGTAGGAAAACACCA+TGG 0.767788 4_4:+78145289 None:intergenic
CGTCGTTGGAGAGAGAAATG+CGG 0.769102 4_4:+78145477 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTAAAATACTAAGA+TGG - chr4_4:78144392-78144411 Msa0705460:intron 10.0%
!! GTTATTATTGTATTAATAAA+TGG + chr4_4:78145576-78145595 None:intergenic 10.0%
!!! TTTGTTATATATATCAAAGA+AGG - chr4_4:78143989-78144008 Msa0705460:CDS 15.0%
!! TTGTTATATATATCAAAGAA+GGG - chr4_4:78143990-78144009 Msa0705460:CDS 15.0%
!! AATAAAAATATAGTTACCTA+CGG + chr4_4:78144149-78144168 None:intergenic 15.0%
!! TATTGTAGTATTGTTAATAT+TGG - chr4_4:78144737-78144756 Msa0705460:intron 15.0%
!! ATTGTAGTATTGTTAATATT+GGG - chr4_4:78144738-78144757 Msa0705460:intron 15.0%
!!! AAATAATTTTTATGCACTTT+AGG + chr4_4:78145186-78145205 None:intergenic 15.0%
!! TAAAGTGCATAAAAATTATT+TGG - chr4_4:78145185-78145204 Msa0705460:CDS 15.0%
!! AAAGTGCATAAAAATTATTT+GGG - chr4_4:78145186-78145205 Msa0705460:CDS 15.0%
!! TGTTATATATATCAAAGAAG+GGG - chr4_4:78143991-78144010 Msa0705460:CDS 20.0%
!! TAAATACATACACTAATCTT+CGG + chr4_4:78144339-78144358 None:intergenic 20.0%
!! GATTGAATTTATATACTAGA+AGG - chr4_4:78144442-78144461 Msa0705460:intron 20.0%
!!! ACATTTAAAGTATTCAAAAC+TGG + chr4_4:78144469-78144488 None:intergenic 20.0%
!!! ATAGAGAATTGTGAATTTTT+AGG - chr4_4:78144889-78144908 Msa0705460:intron 20.0%
!! ATATTTCTTGCATTAAGAAA+TGG - chr4_4:78145741-78145760 Msa0705460:CDS 20.0%
!! TTGTAAAAAAATATAAGCAG+TGG + chr4_4:78145904-78145923 None:intergenic 20.0%
!!! TTTTTTTACAATTTCTAGAG+TGG - chr4_4:78145913-78145932 Msa0705460:five_prime_UTR 20.0%
! TTATGTATTGTCCTTAACAA+CGG + chr4_4:78144245-78144264 None:intergenic 25.0%
! GACAATACATAATAAGTGTA+AGG - chr4_4:78144253-78144272 Msa0705460:CDS 25.0%
! AAATACATACACTAATCTTC+GGG + chr4_4:78144338-78144357 None:intergenic 25.0%
!! ACAAATGAATCAACCTTTTT+AGG + chr4_4:78144418-78144437 None:intergenic 25.0%
! TTGGGTTATTTGATATATGT+TGG - chr4_4:78144756-78144775 Msa0705460:intron 25.0%
! TGCATAAAAATTATTTGGGA+AGG - chr4_4:78145190-78145209 Msa0705460:CDS 25.0%
! TGGTAGAAGTAAATTACAAA+GGG + chr4_4:78145556-78145575 None:intergenic 25.0%
! ATGGTAGAAGTAAATTACAA+AGG + chr4_4:78145557-78145576 None:intergenic 25.0%
! ATTTCAATAGCAATCGAAAA+AGG - chr4_4:78145605-78145624 Msa0705460:CDS 25.0%
! TTTCAATAGCAATCGAAAAA+GGG - chr4_4:78145606-78145625 Msa0705460:CDS 25.0%
! AAAAAGGGAAAAAAAATCCA+AGG - chr4_4:78145621-78145640 Msa0705460:CDS 25.0%
! AAAAGGGAAAAAAAATCCAA+GGG - chr4_4:78145622-78145641 Msa0705460:CDS 25.0%
!!! TCATTTTTTATTGGCTTCAT+TGG + chr4_4:78145829-78145848 None:intergenic 25.0%
! GAAGCCAATAAAAAATGATA+CGG - chr4_4:78145831-78145850 Msa0705460:CDS 25.0%
! AAGCCAATAAAAAATGATAC+GGG - chr4_4:78145832-78145851 Msa0705460:CDS 25.0%
! GTTGTTATTGCGAGTTTAAT+GGG + chr4_4:78143170-78143189 None:intergenic 30.0%
! AGTTGTTATTGCGAGTTTAA+TGG + chr4_4:78143171-78143190 None:intergenic 30.0%
AAAAATATAGTTACCTACGG+TGG + chr4_4:78144146-78144165 None:intergenic 30.0%
TAAGGTCGATATTTAAACTC+TGG - chr4_4:78144271-78144290 Msa0705460:intron 30.0%
AATACTAAGATGGCCTAAAA+AGG - chr4_4:78144402-78144421 Msa0705460:intron 30.0%
AGCACAAAATTCTTACAATG+AGG + chr4_4:78144592-78144611 None:intergenic 30.0%
CTTTCATGCATACATACTTA+AGG + chr4_4:78144700-78144719 None:intergenic 30.0%
TATTTGATATATGTTGGCAG+CGG - chr4_4:78144762-78144781 Msa0705460:intron 30.0%
! GGCAATGTAGATTTTATCTT+TGG - chr4_4:78144973-78144992 Msa0705460:CDS 30.0%
TTCCAGAACTGTTTGATTAA+TGG - chr4_4:78145126-78145145 Msa0705460:CDS 30.0%
TTCCATTAATCAAACAGTTC+TGG + chr4_4:78145131-78145150 None:intergenic 30.0%
GCACTTAAGACACTTTATTA+TGG - chr4_4:78145306-78145325 Msa0705460:CDS 30.0%
TATGGAGAATTTGAGAATAC+TGG - chr4_4:78145324-78145343 Msa0705460:CDS 30.0%
AGCCAATAAAAAATGATACG+GGG - chr4_4:78145833-78145852 Msa0705460:CDS 30.0%
!! GAGTTTAATGGGTTTGTTCA+TGG + chr4_4:78143159-78143178 None:intergenic 35.0%
! ATCTAGAATAGCCTTAACCA+TGG + chr4_4:78143471-78143490 None:intergenic 35.0%
ATTCGTTAGTATTTCGATGC+AGG + chr4_4:78143534-78143553 None:intergenic 35.0%
TATCAAAGAAGGGGTTTATG+AGG - chr4_4:78144000-78144019 Msa0705460:CDS 35.0%
! AAGAGAAACGTGGTGTTTTT+AGG - chr4_4:78144046-78144065 Msa0705460:CDS 35.0%
!!! GTGTTTTTAGGTGATGGAAT+CGG - chr4_4:78144058-78144077 Msa0705460:CDS 35.0%
!!! TGTTTTTAGGTGATGGAATC+GGG - chr4_4:78144059-78144078 Msa0705460:CDS 35.0%
AGAGTTGTAAGTAGTCATTC+CGG + chr4_4:78144122-78144141 None:intergenic 35.0%
AGTATGTATGCATGAAAGCA+TGG - chr4_4:78144702-78144721 Msa0705460:intron 35.0%
AATCTACATTGCCTACAATG+CGG + chr4_4:78144966-78144985 None:intergenic 35.0%
CTGTTTGATTAATGGAACTG+AGG - chr4_4:78145134-78145153 Msa0705460:CDS 35.0%
TAATGGAACTGAGGATTACA+TGG - chr4_4:78145143-78145162 Msa0705460:CDS 35.0%
AAAATTATTTGGGAAGGCCA+TGG - chr4_4:78145196-78145215 Msa0705460:CDS 35.0%
ATTTCATTCAAGGAGGTGAA+TGG - chr4_4:78145427-78145446 Msa0705460:CDS 35.0%
!! ATAGGAGGCATCAGTAAAAT+AGG - chr4_4:78145502-78145521 Msa0705460:CDS 35.0%
!! TAGGAGGCATCAGTAAAATA+GGG - chr4_4:78145503-78145522 Msa0705460:CDS 35.0%
! TGTATGGGGCAATTTGAAAT+TGG - chr4_4:78145707-78145726 Msa0705460:CDS 35.0%
TACACCAACTTTACTACATC+AGG + chr4_4:78145787-78145806 None:intergenic 35.0%
!!! CTCCCCGTATCATTTTTTAT+TGG + chr4_4:78145838-78145857 None:intergenic 35.0%
AGAAGCTTAGCATAACATAG+TGG + chr4_4:78145863-78145882 None:intergenic 35.0%
! AATGGGTTTGTTCATGGTTG+TGG + chr4_4:78143153-78143172 None:intergenic 40.0%
CGCAATAACAACTCTCTACA+TGG - chr4_4:78143178-78143197 Msa0705460:three_prime_UTR 40.0%
ATTCGCATTGTTGTGGAAAG+CGG + chr4_4:78143355-78143374 None:intergenic 40.0%
AGTGATGATTCGCATTGTTG+TGG + chr4_4:78143362-78143381 None:intergenic 40.0%
ATTGGTAGATGAGAGGTTGA+TGG + chr4_4:78143432-78143451 None:intergenic 40.0%
TTACGAGATTGGTAGATGAG+AGG + chr4_4:78143439-78143458 None:intergenic 40.0%
!! TCCAACGACGTTTTAACACA+TGG - chr4_4:78143575-78143594 Msa0705460:CDS 40.0%
TCCATGTGTTAAAACGTCGT+TGG + chr4_4:78143579-78143598 None:intergenic 40.0%
GTTACTAGAGAGGGTTTCAA+GGG + chr4_4:78143723-78143742 None:intergenic 40.0%
! GTGTTTTCCTACGACGTTTA+TGG - chr4_4:78143755-78143774 Msa0705460:CDS 40.0%
! GTCTTTTCCATAAACGTCGT+AGG + chr4_4:78143765-78143784 None:intergenic 40.0%
GGAGAAGGGTTGTTATAAGA+CGG - chr4_4:78143916-78143935 Msa0705460:CDS 40.0%
GGTTTATGAGGAAACCGTTA+GGG - chr4_4:78144012-78144031 Msa0705460:CDS 40.0%
!!! AACGTGGTGTTTTTAGGTGA+TGG - chr4_4:78144052-78144071 Msa0705460:CDS 40.0%
!! TATTACCGGTTCTGCTAATG+TGG - chr4_4:78144090-78144109 Msa0705460:CDS 40.0%
!! ATTACCGGTTCTGCTAATGT+GGG - chr4_4:78144091-78144110 Msa0705460:CDS 40.0%
GAGTTGTAAGTAGTCATTCC+GGG + chr4_4:78144121-78144140 None:intergenic 40.0%
AAGTCTTACCTCCGTTGTTA+AGG - chr4_4:78144231-78144250 Msa0705460:CDS 40.0%
TGTATTGTCCTTAACAACGG+AGG + chr4_4:78144242-78144261 None:intergenic 40.0%
ACATACACTAATCTTCGGGT+GGG + chr4_4:78144334-78144353 None:intergenic 40.0%
TACATACACTAATCTTCGGG+TGG + chr4_4:78144335-78144354 None:intergenic 40.0%
GTAACCTTTGTATGCTTGCT+AGG - chr4_4:78144487-78144506 Msa0705460:intron 40.0%
! TTTGTATGCTTGCTAGGCAT+GGG - chr4_4:78144493-78144512 Msa0705460:intron 40.0%
CTTAAGGCATGTGAAAGTGA+AGG + chr4_4:78144684-78144703 None:intergenic 40.0%
! TGCGGCATGATTTGTAGAAT+TGG + chr4_4:78144948-78144967 None:intergenic 40.0%
TACAAATCATGCCGCATTGT+AGG - chr4_4:78144952-78144971 Msa0705460:CDS 40.0%
!! GTTCTAGAATACTCCTTCCA+TGG + chr4_4:78145216-78145235 None:intergenic 40.0%
GAAGTCCTTATTACACCTCA+AGG - chr4_4:78145258-78145277 Msa0705460:CDS 40.0%
TCCTTATTACACCTCAAGGT+TGG - chr4_4:78145262-78145281 Msa0705460:CDS 40.0%
TCCAACCTTGAGGTGTAATA+AGG + chr4_4:78145266-78145285 None:intergenic 40.0%
GAATTTGAGAATACTGGTGC+TGG - chr4_4:78145330-78145349 Msa0705460:CDS 40.0%
!! TGGTTCTGATTTGTCTCAGA+GGG - chr4_4:78145350-78145369 Msa0705460:CDS 40.0%
ATAACTCGACACATGTTCAG+CGG + chr4_4:78145397-78145416 None:intergenic 40.0%
ACATGTGTCGAGTTATTCAG+CGG - chr4_4:78145401-78145420 Msa0705460:CDS 40.0%
TCAGCGGAGAATTTCATTCA+AGG - chr4_4:78145417-78145436 Msa0705460:CDS 40.0%
GGAGTCATCACAATACTCAT+AGG - chr4_4:78145484-78145503 Msa0705460:CDS 40.0%
GTCATCACAATACTCATAGG+AGG - chr4_4:78145487-78145506 Msa0705460:CDS 40.0%
!! AGGAGGCATCAGTAAAATAG+GGG - chr4_4:78145504-78145523 Msa0705460:CDS 40.0%
GGGAAAAAAAATCCAAGGGA+AGG - chr4_4:78145626-78145645 Msa0705460:CDS 40.0%
CACTTTATCTAACCTTCCCT+TGG + chr4_4:78145641-78145660 None:intergenic 40.0%
TGGGACTCTTTCTAAGTATG+TGG + chr4_4:78145682-78145701 None:intergenic 40.0%
AAAGAGTCCCACTCAATGTA+TGG - chr4_4:78145691-78145710 Msa0705460:CDS 40.0%
AAGAGTCCCACTCAATGTAT+GGG - chr4_4:78145692-78145711 Msa0705460:CDS 40.0%
AATTGCCCCATACATTGAGT+GGG + chr4_4:78145701-78145720 None:intergenic 40.0%
AAATTGCCCCATACATTGAG+TGG + chr4_4:78145702-78145721 None:intergenic 40.0%
GTGACCTGATGTAGTAAAGT+TGG - chr4_4:78145780-78145799 Msa0705460:CDS 40.0%
! GTGTACTTGTGCAACACTTT+TGG - chr4_4:78145802-78145821 Msa0705460:CDS 40.0%
TTCGCATTGTTGTGGAAAGC+GGG + chr4_4:78143354-78143373 None:intergenic 45.0%
GGATTGGAGAATTTGGAGAG+CGG + chr4_4:78143408-78143427 None:intergenic 45.0%
!! TGATGGCGGATTGGAGAATT+TGG + chr4_4:78143415-78143434 None:intergenic 45.0%
AACCGCACAATCCATGGTTA+AGG - chr4_4:78143457-78143476 Msa0705460:three_prime_UTR 45.0%
! AGCCTTAACCATGGATTGTG+CGG + chr4_4:78143462-78143481 None:intergenic 45.0%
TAGTATTTCGATGCAGGTGG+TGG + chr4_4:78143528-78143547 None:intergenic 45.0%
CGTTAGTATTTCGATGCAGG+TGG + chr4_4:78143531-78143550 None:intergenic 45.0%
AAATCAAAGACGCTCGAGCA+TGG - chr4_4:78143600-78143619 Msa0705460:CDS 45.0%
CGTTACTAGAGAGGGTTTCA+AGG + chr4_4:78143724-78143743 None:intergenic 45.0%
AACGTCGTAGGAAAACACCA+TGG + chr4_4:78143753-78143772 None:intergenic 45.0%
ATGGAAAAGACACGTCGTTG+TGG - chr4_4:78143774-78143793 Msa0705460:CDS 45.0%
ATGTTACGGTGTGTAAGGGA+GGG - chr4_4:78143894-78143913 Msa0705460:CDS 45.0%
GGGTTTATGAGGAAACCGTT+AGG - chr4_4:78144011-78144030 Msa0705460:CDS 45.0%
ACCACGTTTCTCTTCTCCAA+CGG + chr4_4:78144040-78144059 None:intergenic 45.0%
ATCGGGAAGACGGTTATTAC+CGG - chr4_4:78144076-78144095 Msa0705460:CDS 45.0%
CATGCCTAGCAAGCATACAA+AGG + chr4_4:78144494-78144513 None:intergenic 45.0%
! CTTTGTATGCTTGCTAGGCA+TGG - chr4_4:78144492-78144511 Msa0705460:intron 45.0%
! TTGTATGCTTGCTAGGCATG+GGG - chr4_4:78144494-78144513 Msa0705460:intron 45.0%
TATATGTTGGCAGCGGTTCT+TGG - chr4_4:78144769-78144788 Msa0705460:intron 45.0%
CTAACGATCGAAAACACAGC+AGG - chr4_4:78144814-78144833 Msa0705460:intron 45.0%
CTAATCTGAATGCCACTGCT+TGG + chr4_4:78144852-78144871 None:intergenic 45.0%
CTTCCAAGACTGTCAAATCC+TGG - chr4_4:78145011-78145030 Msa0705460:CDS 45.0%
GAACCAGGATTTGACAGTCT+TGG + chr4_4:78145017-78145036 None:intergenic 45.0%
! TTCTCTGGCTTGAGTTGTCT+AGG + chr4_4:78145042-78145061 None:intergenic 45.0%
TAGACAACTCAAGCCAGAGA+AGG - chr4_4:78145041-78145060 Msa0705460:CDS 45.0%
AGACAACTCAAGCCAGAGAA+GGG - chr4_4:78145042-78145061 Msa0705460:CDS 45.0%
AACAATGCCATCACAGCTCA+TGG - chr4_4:78145069-78145088 Msa0705460:CDS 45.0%
CAAATCCTGTACTCTGTGCA+GGG + chr4_4:78145104-78145123 None:intergenic 45.0%
ACAAATCCTGTACTCTGTGC+AGG + chr4_4:78145105-78145124 None:intergenic 45.0%
TTATTTGGGAAGGCCATGGA+AGG - chr4_4:78145200-78145219 Msa0705460:CDS 45.0%
!! CTGGTTCTGATTTGTCTCAG+AGG - chr4_4:78145349-78145368 Msa0705460:CDS 45.0%
ATTTGTCTCAGAGGGTGACT+TGG - chr4_4:78145358-78145377 Msa0705460:CDS 45.0%
TAACTCGACACATGTTCAGC+GGG + chr4_4:78145396-78145415 None:intergenic 45.0%
GCGGAGAATTTCATTCAAGG+AGG - chr4_4:78145420-78145439 Msa0705460:CDS 45.0%
TCTCAGTTATCAGCACATCG+TGG - chr4_4:78145459-78145478 Msa0705460:CDS 45.0%
AGTTATCAGCACATCGTGGT+AGG - chr4_4:78145463-78145482 Msa0705460:CDS 45.0%
AGAGTCCCACTCAATGTATG+GGG - chr4_4:78145693-78145712 Msa0705460:CDS 45.0%
CGGAGGAGAGAGTGATGAAA+AGG + chr4_4:78143229-78143248 None:intergenic 50.0%
! GGGTTGCTTTACAGGCTTGT+TGG + chr4_4:78143334-78143353 None:intergenic 50.0%
!! TGGAAAGCGGGTTGCTTTAC+AGG + chr4_4:78143342-78143361 None:intergenic 50.0%
GGTGGGATTTGGAGGGATAT+GGG + chr4_4:78143387-78143406 None:intergenic 50.0%
ATTTGGAGAGCGGTGGGATT+TGG + chr4_4:78143398-78143417 None:intergenic 50.0%
TGGAGAATTTGGAGAGCGGT+GGG + chr4_4:78143404-78143423 None:intergenic 50.0%
TTGGAGAATTTGGAGAGCGG+TGG + chr4_4:78143405-78143424 None:intergenic 50.0%
!! ATGAGAGGTTGATGGCGGAT+TGG + chr4_4:78143424-78143443 None:intergenic 50.0%
!! GGTAGATGAGAGGTTGATGG+CGG + chr4_4:78143429-78143448 None:intergenic 50.0%
GGATTGTGCGGTTACGAGAT+TGG + chr4_4:78143450-78143469 None:intergenic 50.0%
TCTCGTAACCGCACAATCCA+TGG - chr4_4:78143451-78143470 Msa0705460:three_prime_UTR 50.0%
CGTCGTTGGAGAGAGAAATG+CGG + chr4_4:78143565-78143584 None:intergenic 50.0%
! GTCGTACTGGTAAGCTAAGG+CGG + chr4_4:78143633-78143652 None:intergenic 50.0%
! GCAGTCGTACTGGTAAGCTA+AGG + chr4_4:78143636-78143655 None:intergenic 50.0%
TAGCTTACCAGTACGACTGC+TGG - chr4_4:78143636-78143655 Msa0705460:CDS 50.0%
! GTGTGTCGTTGGCGTATTTC+AGG + chr4_4:78143667-78143686 None:intergenic 50.0%
!! GGCAAGAGCGTTACTAGAGA+GGG + chr4_4:78143732-78143751 None:intergenic 50.0%
!! TGGCAAGAGCGTTACTAGAG+AGG + chr4_4:78143733-78143752 None:intergenic 50.0%
CTCTAGTAACGCTCTTGCCA+TGG - chr4_4:78143733-78143752 Msa0705460:CDS 50.0%
TTTATGGCAGGCGACTGGAT+CGG - chr4_4:78143823-78143842 Msa0705460:CDS 50.0%
! GAGGATCGGTGTCTAGCATA+GGG - chr4_4:78143849-78143868 Msa0705460:CDS 50.0%
GGTGTCTAGCATAGGGATTC+CGG - chr4_4:78143856-78143875 Msa0705460:CDS 50.0%
AAAGCTGACGCCGGATGTTA+CGG - chr4_4:78143880-78143899 Msa0705460:CDS 50.0%
CCCTTACACACCGTAACATC+CGG + chr4_4:78143893-78143912 None:intergenic 50.0%
CCGGATGTTACGGTGTGTAA+GGG - chr4_4:78143890-78143909 Msa0705460:CDS 50.0%
GATGTTACGGTGTGTAAGGG+AGG - chr4_4:78143893-78143912 Msa0705460:CDS 50.0%
TGTTACGGTGTGTAAGGGAG+GGG - chr4_4:78143895-78143914 Msa0705460:CDS 50.0%
GGGTTGTTATAAGACGGTGC+AGG - chr4_4:78143922-78143941 Msa0705460:CDS 50.0%
GTTAATGCTGCGCCGGATAA+CGG - chr4_4:78143950-78143969 Msa0705460:CDS 50.0%
CTTCTCCAACGGAACCCTAA+CGG + chr4_4:78144029-78144048 None:intergenic 50.0%
TCCGTTGGAGAAGAGAAACG+TGG - chr4_4:78144036-78144055 Msa0705460:CDS 50.0%
!! AGGTGATGGAATCGGGAAGA+CGG - chr4_4:78144066-78144085 Msa0705460:CDS 50.0%
TGTAAGTAGTCATTCCGGGC+TGG + chr4_4:78144117-78144136 None:intergenic 50.0%
ACTTACAACTCTGCCACCGT+AGG - chr4_4:78144130-78144149 Msa0705460:CDS 50.0%
! GGTTCTTGGCGATGGATTCA+TGG - chr4_4:78144783-78144802 Msa0705460:intron 50.0%
! TGGCGATGGATTCATGGCAA+AGG - chr4_4:78144789-78144808 Msa0705460:intron 50.0%
! TGAGTTGTCTAGGACGAACC+AGG + chr4_4:78145032-78145051 None:intergenic 50.0%
GCATTGTTCTCACCCTTCTC+TGG + chr4_4:78145057-78145076 None:intergenic 50.0%
GGTTCTACCATGAGCTGTGA+TGG + chr4_4:78145079-78145098 None:intergenic 50.0%
AGTGCAAAGTCACCACTCCA+TGG + chr4_4:78145291-78145310 None:intergenic 50.0%
!! GTTGGTGGTGGTTGTGGTTG+TGG + chr4_4:78143262-78143281 None:intergenic 55.0%
!! GGCTTGTTGGATCTCTGAGC+CGG + chr4_4:78143321-78143340 None:intergenic 55.0%
CGGTGGGATTTGGAGGGATA+TGG + chr4_4:78143388-78143407 None:intergenic 55.0%
! GTACTGGTAAGCTAAGGCGG+CGG + chr4_4:78143630-78143649 None:intergenic 55.0%
TTATGGCAGGCGACTGGATC+GGG - chr4_4:78143824-78143843 Msa0705460:CDS 55.0%
! GGAGGATCGGTGTCTAGCAT+AGG - chr4_4:78143848-78143867 Msa0705460:CDS 55.0%
GCCGGATGTTACGGTGTGTA+AGG - chr4_4:78143889-78143908 Msa0705460:CDS 55.0%
GTGTGTAAGGGAGGGGAGAA+GGG - chr4_4:78143902-78143921 Msa0705460:CDS 55.0%
GGAAGCAGTTAATGCTGCGC+CGG - chr4_4:78143943-78143962 Msa0705460:CDS 55.0%
TTCCCGTCAACGCCGTTATC+CGG + chr4_4:78143965-78143984 None:intergenic 55.0%
!! ATAACGGCGTTGACGGGAAG+AGG - chr4_4:78143966-78143985 Msa0705460:CDS 55.0%
GGAAACCGTTAGGGTTCCGT+TGG - chr4_4:78144021-78144040 Msa0705460:CDS 55.0%
CTGGCCCACATTAGCAGAAC+CGG + chr4_4:78144098-78144117 None:intergenic 55.0%
TCCTGATGCACACCAAGCAG+TGG - chr4_4:78144837-78144856 Msa0705460:intron 55.0%
TCCTGTACTCTGTGCAGGGT+CGG + chr4_4:78145100-78145119 None:intergenic 55.0%
CACCTCAAGGTTGGATGCCA+TGG - chr4_4:78145271-78145290 Msa0705460:CDS 55.0%
CTCCATGGCATCCAACCTTG+AGG + chr4_4:78145276-78145295 None:intergenic 55.0%
CAAGGTTGGATGCCATGGAG+TGG - chr4_4:78145276-78145295 Msa0705460:CDS 55.0%
! GTTGTGGTTGTGGTGGCGAG+TGG + chr4_4:78143252-78143271 None:intergenic 60.0%
! GGTGGTGGTTGTGGTTGTGG+TGG + chr4_4:78143259-78143278 None:intergenic 60.0%
!! GAGTGGGTTGGTGGTGGTTG+TGG + chr4_4:78143268-78143287 None:intergenic 60.0%
TTGGGAGAAACGGAGGGGGA+GGG + chr4_4:78143296-78143315 None:intergenic 60.0%
! TGAGCCGGCGTTGGGAGAAA+CGG + chr4_4:78143306-78143325 None:intergenic 60.0%
TGGATCTCTGAGCCGGCGTT+GGG + chr4_4:78143314-78143333 None:intergenic 60.0%
TTGGATCTCTGAGCCGGCGT+TGG + chr4_4:78143315-78143334 None:intergenic 60.0%
GGAGAGCGGTGGGATTTGGA+GGG + chr4_4:78143394-78143413 None:intergenic 60.0%
TGGAGAGCGGTGGGATTTGG+AGG + chr4_4:78143395-78143414 None:intergenic 60.0%
! GGTACGGTTACGGCTAGCTG+AGG + chr4_4:78143498-78143517 None:intergenic 60.0%
TGGCAGCGACGGTACGGTTA+CGG + chr4_4:78143508-78143527 None:intergenic 60.0%
GGCTGTTCCAGCAGTCGTAC+TGG + chr4_4:78143646-78143665 None:intergenic 60.0%
GCCAACGACACACACGCTGT+CGG - chr4_4:78143674-78143693 Msa0705460:CDS 60.0%
ACCGACAGCGTGTGTGTCGT+TGG + chr4_4:78143678-78143697 None:intergenic 60.0%
CTGCCATAAACCGTCGCGCT+CGG + chr4_4:78143813-78143832 None:intergenic 60.0%
GACGGTTTATGGCAGGCGAC+TGG - chr4_4:78143818-78143837 Msa0705460:CDS 60.0%
GACTGGATCGGGAGGAGGAT+CGG - chr4_4:78143835-78143854 Msa0705460:CDS 60.0%
GATTCCGGCAAAGCTGACGC+CGG - chr4_4:78143871-78143890 Msa0705460:CDS 60.0%
ACATCCGGCGTCAGCTTTGC+CGG + chr4_4:78143878-78143897 None:intergenic 60.0%
GGTGTGTAAGGGAGGGGAGA+AGG - chr4_4:78143901-78143920 Msa0705460:CDS 60.0%
TCTGCTAATGTGGGCCAGCC+CGG - chr4_4:78144100-78144119 Msa0705460:CDS 60.0%
TTGGCAGCGGTTCTTGGCGA+TGG - chr4_4:78144775-78144794 Msa0705460:intron 60.0%
!! GCCACTGCTTGGTGTGCATC+AGG + chr4_4:78144841-78144860 None:intergenic 60.0%
ACCGACCCTGCACAGAGTAC+AGG - chr4_4:78145096-78145115 Msa0705460:CDS 60.0%
! GTGGTTGTGGTGGCGAGTGG+CGG + chr4_4:78143249-78143268 None:intergenic 65.0%
!! GAGAGGGAGTGGGTTGGTGG+TGG + chr4_4:78143274-78143293 None:intergenic 65.0%
!! AGGGAGAGGGAGTGGGTTGG+TGG + chr4_4:78143277-78143296 None:intergenic 65.0%
GAAACGGAGGGGGAGGGAGA+GGG + chr4_4:78143290-78143309 None:intergenic 65.0%
AGAAACGGAGGGGGAGGGAG+AGG + chr4_4:78143291-78143310 None:intergenic 65.0%
GTTGGGAGAAACGGAGGGGG+AGG + chr4_4:78143297-78143316 None:intergenic 65.0%
! GGCGTTGGGAGAAACGGAGG+GGG + chr4_4:78143300-78143319 None:intergenic 65.0%
! CGGCGTTGGGAGAAACGGAG+GGG + chr4_4:78143301-78143320 None:intergenic 65.0%
! CCGGCGTTGGGAGAAACGGA+GGG + chr4_4:78143302-78143321 None:intergenic 65.0%
CCCTCCGTTTCTCCCAACGC+CGG - chr4_4:78143299-78143318 Msa0705460:three_prime_UTR 65.0%
! AGGTGGTGGCAGCGACGGTA+CGG + chr4_4:78143514-78143533 None:intergenic 65.0%
! GATGCAGGTGGTGGCAGCGA+CGG + chr4_4:78143519-78143538 None:intergenic 65.0%
! AAACCGTCGCGCTCGGTGGT+TGG + chr4_4:78143806-78143825 None:intergenic 65.0%
CCATAAACCGTCGCGCTCGG+TGG + chr4_4:78143810-78143829 None:intergenic 65.0%
CCACCGAGCGCGACGGTTTA+TGG - chr4_4:78143807-78143826 Msa0705460:CDS 65.0%
CGAGCGCGACGGTTTATGGC+AGG - chr4_4:78143811-78143830 Msa0705460:CDS 65.0%
! GCGCCGGATAACGGCGTTGA+CGG - chr4_4:78143959-78143978 Msa0705460:CDS 65.0%
!! CGCCGGATAACGGCGTTGAC+GGG - chr4_4:78143960-78143979 Msa0705460:CDS 65.0%
! GTTGTGGTGGCGAGTGGCGG+AGG + chr4_4:78143246-78143265 None:intergenic 70.0%
GGGAGGGAGAGGGAGTGGGT+TGG + chr4_4:78143280-78143299 None:intergenic 70.0%
GAGGGGGAGGGAGAGGGAGT+GGG + chr4_4:78143284-78143303 None:intergenic 70.0%
! GCCGGCGTTGGGAGAAACGG+AGG + chr4_4:78143303-78143322 None:intergenic 70.0%
TGGCAGGCGACTGGATCGGG+AGG - chr4_4:78143827-78143846 Msa0705460:CDS 70.0%
CAGGCGACTGGATCGGGAGG+AGG - chr4_4:78143830-78143849 Msa0705460:CDS 70.0%
GGAGGGGGAGGGAGAGGGAG+TGG + chr4_4:78143285-78143304 None:intergenic 75.0%
! CCGTCGCGCTCGGTGGTTGG+CGG + chr4_4:78143803-78143822 None:intergenic 75.0%
CCGCCAACCACCGAGCGCGA+CGG - chr4_4:78143800-78143819 Msa0705460:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 78143119 78145942 78143119 ID=Msa0705460;Name=Msa0705460
chr4_4 mRNA 78143119 78145942 78143119 ID=Msa0705460-mRNA-1;Parent=Msa0705460;Name=Msa0705460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=39|1|1|1|1|1|2|424|576
chr4_4 exon 78143119 78144279 78143119 ID=Msa0705460-mRNA-1:exon:24904;Parent=Msa0705460-mRNA-1
chr4_4 exon 78144910 78145942 78144910 ID=Msa0705460-mRNA-1:exon:24903;Parent=Msa0705460-mRNA-1
chr4_4 five_prime_UTR 78145904 78145942 78145904 ID=Msa0705460-mRNA-1:five_prime_utr;Parent=Msa0705460-mRNA-1
chr4_4 CDS 78144910 78145903 78144910 ID=Msa0705460-mRNA-1:cds;Parent=Msa0705460-mRNA-1
chr4_4 CDS 78143543 78144279 78143543 ID=Msa0705460-mRNA-1:cds;Parent=Msa0705460-mRNA-1
chr4_4 three_prime_UTR 78143119 78143542 78143119 ID=Msa0705460-mRNA-1:three_prime_utr;Parent=Msa0705460-mRNA-1
Gene Sequence

>Msa0705460

ATGAACAAACCCATTAAACTCGCAATAACAACTCTCTACATGGCTTCTCTCTTCACTTTATCTCTCTTCCTTTTCATCACTCTCTCCTCCGCCACTCGCCACCACAACCACAACCACCACCAACCCACTCCCTCTCCCTCCCCCTCCGTTTCTCCCAACGCCGGCTCAGAGATCCAACAAGCCTGTAAAGCAACCCGCTTTCCACAACAATGCGAATCATCACTCGCCCATATCCCTCCAAATCCCACCGCTCTCCAAATTCTCCAATCCGCCATCAACCTCTCATCTACCAATCTCGTAACCGCACAATCCATGGTTAAGGCTATTCTAGATTCTTCCTCAGCTAGCCGTAACCGTACCGTCGCTGCCACCACCTGCATCGAAATACTAACGAATTCACAGCACCGCATTTCTCTCTCCAACGACGTTTTAACACATGGAAAAATCAAAGACGCTCGAGCATGGCTGACCGCCGCCTTAGCTTACCAGTACGACTGCTGGAACAGCCTGAAATACGCCAACGACACACACGCTGTCGGTGAAGCTATGTCGTTTATCGATTCCCTTGAAACCCTCTCTAGTAACGCTCTTGCCATGGTGTTTTCCTACGACGTTTATGGAAAAGACACGTCGTTGTGGAAGCCGCCAACCACCGAGCGCGACGGTTTATGGCAGGCGACTGGATCGGGAGGAGGATCGGTGTCTAGCATAGGGATTCCGGCAAAGCTGACGCCGGATGTTACGGTGTGTAAGGGAGGGGAGAAGGGTTGTTATAAGACGGTGCAGGAAGCAGTTAATGCTGCGCCGGATAACGGCGTTGACGGGAAGAGGTTTGTTATATATATCAAAGAAGGGGTTTATGAGGAAACCGTTAGGGTTCCGTTGGAGAAGAGAAACGTGGTGTTTTTAGGTGATGGAATCGGGAAGACGGTTATTACCGGTTCTGCTAATGTGGGCCAGCCCGGAATGACTACTTACAACTCTGCCACCGTAGCGGTTCTTGGCGATGGATTCATGGCAAAGGATCTAACGATCGAAAACACAGCAGGTCCTGATGCACACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTAATAGAGAATTGTGAATTTTTAGGAAATCAAGATACTCTTTATGCTCATTCTCTGCGCCAATTCTACAAATCATGCCGCATTGTAGGCAATGTAGATTTTATCTTTGGAAACTCAGCTGCAATCTTCCAAGACTGTCAAATCCTGGTTCGTCCTAGACAACTCAAGCCAGAGAAGGGTGAGAACAATGCCATCACAGCTCATGGTAGAACCGACCCTGCACAGAGTACAGGATTTGTTTTCCAGAACTGTTTGATTAATGGAACTGAGGATTACATGGCATTGTATCATAGTAATCCTAAAGTGCATAAAAATTATTTGGGAAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTCATTCGATATTAGAAGTCCTTATTACACCTCAAGGTTGGATGCCATGGAGTGGTGACTTTGCACTTAAGACACTTTATTATGGAGAATTTGAGAATACTGGTGCTGGTTCTGATTTGTCTCAGAGGGTGACTTGGAGCAGTAAAATTCCCGCTGAACATGTGTCGAGTTATTCAGCGGAGAATTTCATTCAAGGAGGTGAATGGATGCAATCATCTCAGTTATCAGCACATCGTGGTAGGAGTCATCACAATACTCATAGGAGGCATCAGTAA
Protein sequence

>Msa0705460

MNKPIKLAITTLYMASLFTLSLFLFITLSSATRHHNHNHHQPTPSPSPSVSPNAGSEIQQACKATRFPQQCESSLAHIPPNPTALQILQSAINLSSTNLVTAQSMVKAILDSSSASRNRTVAATTCIEILTNSQHRISLSNDVLTHGKIKDARAWLTAALAYQYDCWNSLKYANDTHAVGEAMSFIDSLETLSSNALAMVFSYDVYGKDTSLWKPPTTERDGLWQATGSGGGSVSSIGIPAKLTPDVTVCKGGEKGCYKTVQEAVNAAPDNGVDGKRFVIYIKEGVYEETVRVPLEKRNVVFLGDGIGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSAAIFQDCQILVRPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEDYMALYHSNPKVHKNYLGRPWKEYSRTVFIHSILEVLITPQGWMPWSGDFALKTLYYGEFENTGAGSDLSQRVTWSSKIPAEHVSSYSAENFIQGGEWMQSSQLSAHRGRSHHNTHRRHQ*