Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951280 | sp|Q93YB2|AADH2_PEA | 80.189 | 212 | 13 | 2 | 53 | 254 | 311 | 503 | 4.57e-116 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951280 | B7FM53 | 83.491 | 212 | 6 | 2 | 53 | 254 | 65 | 257 | 6.03e-119 | 349 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0951280 | 0.810029 | 1.412508e-50 | -8.615850e-47 |
| Msa0046100 | Msa0951280 | 0.800127 | 1.667053e-48 | -8.615850e-47 |
| Msa0091600 | Msa0951280 | 0.823452 | 1.375056e-53 | -8.615850e-47 |
| Msa0731270 | Msa0951280 | 0.865825 | 4.456718e-65 | -8.615850e-47 |
| Msa0771280 | Msa0951280 | 0.864291 | 1.351374e-64 | -8.615850e-47 |
| Msa0841340 | Msa0951280 | 0.803166 | 3.968508e-49 | -8.615850e-47 |
| Msa0146260 | Msa0951280 | 0.819832 | 9.439384e-53 | -8.615850e-47 |
| Msa0195630 | Msa0951280 | 0.802150 | 6.430548e-49 | -8.615850e-47 |
| Msa0283640 | Msa0951280 | 0.815664 | 8.232294e-52 | -8.615850e-47 |
| Msa0333600 | Msa0951280 | 0.842868 | 1.988129e-58 | -8.615850e-47 |
| Msa0546540 | Msa0951280 | 0.868926 | 4.538651e-66 | -8.615850e-47 |
| Msa0848530 | Msa0951280 | 0.862610 | 4.485974e-64 | -8.615850e-47 |
| Msa0865060 | Msa0951280 | 0.836385 | 9.652235e-57 | -8.615850e-47 |
| Msa0884290 | Msa0951280 | 0.855718 | 5.227652e-62 | -8.615850e-47 |
| Msa0951280 | Msa1236100 | 0.805427 | 1.341685e-49 | -8.615850e-47 |
| Msa0951280 | Msa1374040 | 0.809445 | 1.886035e-50 | -8.615850e-47 |
| Msa0951280 | Msa1422580 | 0.803783 | 2.956412e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951280 | MtrunA17_Chr4g0059521 | 83.491 | 212 | 6 | 2 | 53 | 254 | 311 | 503 | 4.07e-120 | 352 |
| Msa0951280 | MtrunA17_Chr3g0118121 | 69.058 | 223 | 37 | 4 | 43 | 254 | 302 | 503 | 5.78e-103 | 308 |
| Msa0951280 | MtrunA17_Chr3g0118081 | 68.161 | 223 | 39 | 4 | 43 | 254 | 332 | 533 | 1.76e-100 | 302 |
| Msa0951280 | MtrunA17_Chr6g0485311 | 35.897 | 195 | 94 | 2 | 61 | 245 | 326 | 499 | 9.57e-35 | 130 |
| Msa0951280 | MtrunA17_Chr6g0485301 | 35.602 | 191 | 92 | 3 | 65 | 245 | 332 | 501 | 2.13e-34 | 129 |
| Msa0951280 | MtrunA17_Chr8g0390631 | 34.500 | 200 | 100 | 3 | 56 | 245 | 315 | 493 | 2.54e-33 | 126 |
| Msa0951280 | MtrunA17_Chr8g0390651 | 34.031 | 191 | 95 | 3 | 65 | 245 | 333 | 502 | 1.27e-32 | 124 |
| Msa0951280 | MtrunA17_Chr8g0365221 | 35.079 | 191 | 93 | 3 | 65 | 245 | 371 | 540 | 7.43e-32 | 122 |
| Msa0951280 | MtrunA17_Chr2g0310091 | 36.126 | 191 | 91 | 2 | 56 | 236 | 360 | 529 | 2.58e-31 | 120 |
| Msa0951280 | MtrunA17_Chr3g0117861 | 35.079 | 191 | 93 | 3 | 65 | 245 | 372 | 541 | 2.94e-31 | 120 |
| Msa0951280 | MtrunA17_Chr4g0059221 | 33.508 | 191 | 96 | 3 | 65 | 245 | 374 | 543 | 3.22e-29 | 115 |
| Msa0951280 | MtrunA17_Chr2g0294411 | 30.337 | 178 | 97 | 3 | 56 | 227 | 352 | 508 | 4.15e-19 | 86.3 |
| Msa0951280 | MtrunA17_Chr2g0279751 | 27.919 | 197 | 112 | 6 | 55 | 238 | 310 | 489 | 3.43e-14 | 71.6 |
| Msa0951280 | MtrunA17_Chr4g0049641 | 26.961 | 204 | 119 | 6 | 56 | 246 | 338 | 524 | 9.67e-14 | 70.5 |
| Msa0951280 | MtrunA17_Chr2g0300801 | 32.143 | 140 | 73 | 3 | 49 | 188 | 314 | 431 | 4.89e-12 | 65.5 |
| Msa0951280 | MtrunA17_Chr4g0074171 | 28.571 | 161 | 90 | 2 | 68 | 227 | 329 | 465 | 1.47e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951280 | AT3G48170.1 | 66.816 | 223 | 42 | 4 | 43 | 254 | 302 | 503 | 1.67e-101 | 305 |
| Msa0951280 | AT1G74920.2 | 68.182 | 220 | 38 | 4 | 43 | 251 | 297 | 495 | 6.66e-101 | 303 |
| Msa0951280 | AT1G74920.1 | 68.182 | 220 | 38 | 4 | 43 | 251 | 302 | 500 | 8.66e-101 | 303 |
| Msa0951280 | AT3G24503.1 | 38.000 | 200 | 93 | 3 | 56 | 245 | 322 | 500 | 5.60e-39 | 142 |
| Msa0951280 | AT1G23800.1 | 33.333 | 192 | 97 | 3 | 64 | 245 | 363 | 533 | 1.10e-30 | 119 |
| Msa0951280 | AT1G79440.1 | 36.364 | 187 | 88 | 2 | 60 | 236 | 355 | 520 | 1.74e-30 | 119 |
| Msa0951280 | AT3G48000.1 | 32.984 | 191 | 97 | 2 | 65 | 245 | 368 | 537 | 7.58e-30 | 117 |
| Msa0951280 | AT3G66658.2 | 29.775 | 178 | 98 | 3 | 56 | 227 | 352 | 508 | 4.70e-19 | 86.7 |
| Msa0951280 | AT3G66658.1 | 29.775 | 178 | 98 | 3 | 56 | 227 | 352 | 508 | 5.35e-19 | 86.3 |
| Msa0951280 | AT2G14170.3 | 29.114 | 158 | 95 | 2 | 56 | 213 | 410 | 550 | 2.19e-14 | 72.8 |
| Msa0951280 | AT2G14170.1 | 29.114 | 158 | 95 | 2 | 56 | 213 | 410 | 550 | 2.35e-14 | 72.8 |
| Msa0951280 | AT2G14170.2 | 29.114 | 158 | 95 | 2 | 56 | 213 | 301 | 441 | 2.69e-14 | 72.4 |
| Msa0951280 | AT1G54100.2 | 32.450 | 151 | 78 | 3 | 61 | 209 | 325 | 453 | 8.19e-12 | 65.1 |
| Msa0951280 | AT1G54100.1 | 32.450 | 151 | 78 | 3 | 61 | 209 | 325 | 453 | 8.19e-12 | 65.1 |
Find 46 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTGATGCAGGCATTTA+AGG | 0.134214 | 6_3:+41277434 | Msa0951280:intron |
| ATTTGGAAAGAAGAAGTATT+TGG | 0.232708 | 6_3:+41277112 | Msa0951280:CDS |
| TGACTACTTCCATGCAAATT+TGG | 0.235483 | 6_3:+41277095 | Msa0951280:CDS |
| CATTTAAGGCCGGAATAGTA+TGG | 0.290640 | 6_3:+41277448 | Msa0951280:CDS |
| TTCAATTCATGCACGGAATC+TGG | 0.312219 | 6_3:-41275871 | None:intergenic |
| ATCCCTTTGAAGAAGGTTGC+AGG | 0.363936 | 6_3:+41276423 | Msa0951280:CDS |
| TTTAATTGATGTTCTTCCTC+AGG | 0.392565 | 6_3:+41273799 | Msa0951280:CDS |
| TTGATGTTCTTCCTCAGGTT+CGG | 0.423417 | 6_3:+41273804 | Msa0951280:CDS |
| GCAATTGACCCATACTATTC+CGG | 0.433561 | 6_3:-41277457 | None:intergenic |
| CAAAACATAATCAATTATCA+TGG | 0.440732 | 6_3:-41277011 | None:intergenic |
| TTTGAAGAAGGTTGCAGGCT+AGG | 0.450099 | 6_3:+41276428 | Msa0951280:CDS |
| ATTTCAGATCCCTTTGAAGA+AGG | 0.451260 | 6_3:+41276416 | Msa0951280:CDS |
| ATGCTTCACTCAAGCGCCAT+GGG | 0.461661 | 6_3:+41277488 | Msa0951280:CDS |
| ACCTGTCCTTCACTAACAAC+AGG | 0.463133 | 6_3:-41276452 | None:intergenic |
| GTCCTCTACAGCTATGGCTT+AGG | 0.463601 | 6_3:+41277290 | Msa0951280:intron |
| ACCTGTTGTTAGTGAAGGAC+AGG | 0.472260 | 6_3:+41276451 | Msa0951280:CDS |
| GGAATCTGGAATGGCGTCAA+TGG | 0.475294 | 6_3:-41275857 | None:intergenic |
| GTCACATCAGTTATGATGGT+TGG | 0.495328 | 6_3:-41277076 | None:intergenic |
| TTCTTCTTTCCAAATTTGCA+TGG | 0.496084 | 6_3:-41277104 | None:intergenic |
| CAATGGCAGCATCTAAAGAA+AGG | 0.502314 | 6_3:+41277040 | Msa0951280:CDS |
| AAGATGTGAGCGTGTAACTA+AGG | 0.508552 | 6_3:+41277340 | Msa0951280:CDS |
| CATGCTTCACTCAAGCGCCA+TGG | 0.516509 | 6_3:+41277487 | Msa0951280:CDS |
| TAGCCTGCAACCTTCTTCAA+AGG | 0.523313 | 6_3:-41276426 | None:intergenic |
| AGCCTGCAACCTTCTTCAAA+GGG | 0.524637 | 6_3:-41276425 | None:intergenic |
| AGTAGTCACATCAGTTATGA+TGG | 0.526637 | 6_3:-41277080 | None:intergenic |
| GACTGGTGGGTCTCGACCAG+AGG | 0.561492 | 6_3:+41276937 | Msa0951280:CDS |
| TTCACTCAAGCGCCATGGGG+AGG | 0.564185 | 6_3:+41277492 | Msa0951280:CDS |
| CTGATGCAGGCATTTAAGGC+CGG | 0.567654 | 6_3:+41277438 | Msa0951280:intron |
| TTCTTTGTTATTGAGCTCAG+AGG | 0.569955 | 6_3:+41273988 | Msa0951280:CDS |
| TCGGTTGATATCAAGCTCAA+AGG | 0.570576 | 6_3:+41273823 | Msa0951280:CDS |
| GTCTCGAACGCTAAGAGTGA+GGG | 0.574738 | 6_3:+41276902 | Msa0951280:CDS |
| GTACATCTCTGATGAAACAT+GGG | 0.582725 | 6_3:+41278098 | Msa0951280:CDS |
| TTCATGCACGGAATCTGGAA+TGG | 0.586797 | 6_3:-41275866 | None:intergenic |
| AGTACATCTCTGATGAAACA+TGG | 0.587377 | 6_3:+41278097 | Msa0951280:CDS |
| CTAGGACCTGTTGTTAGTGA+AGG | 0.591311 | 6_3:+41276446 | Msa0951280:CDS |
| TAGATCAATAGCTTCTTCCT+CGG | 0.596377 | 6_3:-41277164 | None:intergenic |
| ATTTAAGGCCGGAATAGTAT+GGG | 0.604605 | 6_3:+41277449 | Msa0951280:CDS |
| TGTCTCGAACGCTAAGAGTG+AGG | 0.614021 | 6_3:+41276901 | Msa0951280:CDS |
| ATATTGCTTCAATTCATGCA+CGG | 0.618950 | 6_3:-41275878 | None:intergenic |
| CTTGATATCAACCGAACCTG+AGG | 0.634579 | 6_3:-41273815 | None:intergenic |
| TGGGGAGGCATTAAACGTAG+TGG | 0.638861 | 6_3:+41277507 | Msa0951280:CDS |
| CTACGTTTAATGCCTCCCCA+TGG | 0.639138 | 6_3:-41277504 | None:intergenic |
| CATGGCGCTTGAGTGAAGCA+TGG | 0.643282 | 6_3:-41277486 | None:intergenic |
| TGCTTCACTCAAGCGCCATG+GGG | 0.659834 | 6_3:+41277489 | Msa0951280:CDS |
| TCTCTGATGAAACATGGGGA+TGG | 0.667130 | 6_3:+41278103 | Msa0951280:CDS |
| TACATCTCTGATGAAACATG+GGG | 0.708762 | 6_3:+41278099 | Msa0951280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTAAAAAAAAATGTTTA+AGG | + | chr6_3:41275523-41275542 | Msa0951280:intron | 10.0% |
| !! | AGAAAAATAAATAAAAAGAT+AGG | - | chr6_3:41277605-41277624 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAATATTTTTAAC+AGG | + | chr6_3:41278042-41278061 | Msa0951280:intron | 10.0% |
| !!! | TTTGTTTAATATTTTTAACA+GGG | + | chr6_3:41278043-41278062 | Msa0951280:intron | 10.0% |
| !! | AAATTTATATCTAAACTGTA+GGG | - | chr6_3:41275299-41275318 | None:intergenic | 15.0% |
| !! | AAAATTTATATCTAAACTGT+AGG | - | chr6_3:41275300-41275319 | None:intergenic | 15.0% |
| !! | TAAGAAAACAACTAAATAAT+TGG | + | chr6_3:41277383-41277402 | Msa0951280:intron | 15.0% |
| !!! | TCTTTTTATTTATTTTTCTC+TGG | + | chr6_3:41277606-41277625 | Msa0951280:intron | 15.0% |
| !!! | TTGTTTAATATTTTTAACAG+GGG | + | chr6_3:41278044-41278063 | Msa0951280:intron | 15.0% |
| !!! | ATTTTTTACAATTTTGTCCT+TGG | + | chr6_3:41273527-41273546 | Msa0951280:intron | 20.0% |
| !!! | TTTTTGATCTTATGTGATTT+TGG | + | chr6_3:41274079-41274098 | Msa0951280:intron | 20.0% |
| !!! | TTTTGATCTTATGTGATTTT+GGG | + | chr6_3:41274080-41274099 | Msa0951280:intron | 20.0% |
| !!! | GATTTGTTGTTTTGAATTTT+TGG | + | chr6_3:41274352-41274371 | Msa0951280:intron | 20.0% |
| !! | AAATAAGTTAACTATGATGA+TGG | + | chr6_3:41274554-41274573 | Msa0951280:intron | 20.0% |
| !! | TAAATTATACATGCATGTTA+TGG | + | chr6_3:41274688-41274707 | Msa0951280:intron | 20.0% |
| !!! | TCTTTTCTTTTTTGTGATTT+TGG | + | chr6_3:41274908-41274927 | Msa0951280:intron | 20.0% |
| !! | AATATTTATCCATTGTGATT+TGG | + | chr6_3:41274964-41274983 | Msa0951280:intron | 20.0% |
| !! | ACATAATCACACAATAATAT+AGG | - | chr6_3:41275214-41275233 | None:intergenic | 20.0% |
| !!! | GATATAAATTTTGTACGATT+TGG | + | chr6_3:41275308-41275327 | Msa0951280:intron | 20.0% |
| !!! | TCATAATTCTTTTTTATGAC+AGG | + | chr6_3:41275810-41275829 | Msa0951280:intron | 20.0% |
| !! | AAATAATTCAACATAATGGT+TGG | + | chr6_3:41275954-41275973 | Msa0951280:intron | 20.0% |
| !! | AAAGTAAATATTCACTCAAA+GGG | - | chr6_3:41275985-41276004 | None:intergenic | 20.0% |
| !! | TAAGATACTCTTATTATTTC+AGG | + | chr6_3:41276337-41276356 | Msa0951280:intron | 20.0% |
| !!! | TAGCAACATAATTTTTGAAT+AGG | + | chr6_3:41276366-41276385 | Msa0951280:intron | 20.0% |
| !!! | AACATAATTTTTGAATAGGA+TGG | + | chr6_3:41276370-41276389 | Msa0951280:intron | 20.0% |
| !! | CATATTCAATGAAAATGTAT+TGG | + | chr6_3:41276585-41276604 | Msa0951280:intron | 20.0% |
| !! | TGTATGTATAATTTATGAGA+AGG | + | chr6_3:41276703-41276722 | Msa0951280:intron | 20.0% |
| !! | TATTCTGTATTCACATTATA+TGG | + | chr6_3:41276853-41276872 | Msa0951280:intron | 20.0% |
| !! | CAAAACATAATCAATTATCA+TGG | - | chr6_3:41277014-41277033 | None:intergenic | 20.0% |
| !! | AATAAAAAGATAGGCATTTA+AGG | - | chr6_3:41277596-41277615 | None:intergenic | 20.0% |
| !! | AAAAGAAACCCATAATTATA+AGG | + | chr6_3:41277660-41277679 | Msa0951280:intron | 20.0% |
| !! | AAATTGGAATTATACATGAT+AGG | + | chr6_3:41277827-41277846 | Msa0951280:intron | 20.0% |
| !! | AATTGGAATTATACATGATA+GGG | + | chr6_3:41277828-41277847 | Msa0951280:intron | 20.0% |
| !! | AAAAGCATGAATGAAATAGT+TGG | - | chr6_3:41273660-41273679 | None:intergenic | 25.0% |
| !!! | ATATTTTCAACTTTTTCTGC+AGG | + | chr6_3:41274115-41274134 | Msa0951280:intron | 25.0% |
| !! | ATTTTCTCTGTTTGTGATTT+TGG | + | chr6_3:41274231-41274250 | Msa0951280:intron | 25.0% |
| !! | TTTTCTCTGTTTGTGATTTT+GGG | + | chr6_3:41274232-41274251 | Msa0951280:intron | 25.0% |
| !!! | TTGTTTTGAATTTTTGGTTC+CGG | + | chr6_3:41274358-41274377 | Msa0951280:intron | 25.0% |
| !! | ATGTTGTTTGGATAAATCAT+TGG | + | chr6_3:41274419-41274438 | Msa0951280:intron | 25.0% |
| ! | TAGTGTTTGGTACAAAATTT+GGG | + | chr6_3:41274477-41274496 | Msa0951280:intron | 25.0% |
| ! | TAGTGTTTGGTACAAAATTT+GGG | + | chr6_3:41274477-41274496 | Msa0951280:intron | 25.0% |
| ! | AACAGTAGAGTTAAATTGAA+GGG | + | chr6_3:41274777-41274796 | Msa0951280:intron | 25.0% |
| ! | AGTTAAATTGAAGGGTTAAA+GGG | + | chr6_3:41274785-41274804 | Msa0951280:intron | 25.0% |
| ! | AACAAGAAATTTGCAGAAAA+AGG | + | chr6_3:41274999-41275018 | Msa0951280:intron | 25.0% |
| ! | AAAAAGGATTACTGAAAGTT+TGG | + | chr6_3:41275015-41275034 | Msa0951280:intron | 25.0% |
| ! | AAAAGGATTACTGAAAGTTT+GGG | + | chr6_3:41275016-41275035 | Msa0951280:intron | 25.0% |
| ! | TGAATTTGATTAGATAGAGA+AGG | + | chr6_3:41275158-41275177 | Msa0951280:intron | 25.0% |
| ! | TTGAGTGAGATAAATATTTG+TGG | + | chr6_3:41275596-41275615 | Msa0951280:intron | 25.0% |
| ! | GCTCAAATAATTCAACATAA+TGG | + | chr6_3:41275950-41275969 | Msa0951280:intron | 25.0% |
| ! | CAAAGTAAATATTCACTCAA+AGG | - | chr6_3:41275986-41276005 | None:intergenic | 25.0% |
| !!! | ATGGTTCTACATTTTGAATA+TGG | + | chr6_3:41276077-41276096 | Msa0951280:intron | 25.0% |
| ! | TACTTACATGTACAATAAGA+CGG | - | chr6_3:41276124-41276143 | None:intergenic | 25.0% |
| ! | TTCTGAACTTTGTAAAGTAA+AGG | + | chr6_3:41276528-41276547 | Msa0951280:intron | 25.0% |
| ! | ATAATTTATGAGAAGGAAGA+AGG | + | chr6_3:41276710-41276729 | Msa0951280:intron | 25.0% |
| ! | AGAAAGAAAACTACATTATG+TGG | - | chr6_3:41276762-41276781 | None:intergenic | 25.0% |
| !! | ACATAATGTAGTTTTCTTTC+TGG | + | chr6_3:41276761-41276780 | Msa0951280:intron | 25.0% |
| ! | TGATTCTAAACATATTTGTC+TGG | + | chr6_3:41276807-41276826 | Msa0951280:intron | 25.0% |
| !! | ATTATGTTTTGCAAATGCAA+TGG | + | chr6_3:41277023-41277042 | Msa0951280:CDS | 25.0% |
| !!! | ATTTGGAAAGAAGAAGTATT+TGG | + | chr6_3:41277112-41277131 | Msa0951280:CDS | 25.0% |
| ! | GGTATCTAAGTTATATACTT+TGG | + | chr6_3:41277268-41277287 | Msa0951280:intron | 25.0% |
| ! | AGACTTCACCTTATAATTAT+GGG | - | chr6_3:41277671-41277690 | None:intergenic | 25.0% |
| ! | TAGACTTCACCTTATAATTA+TGG | - | chr6_3:41277672-41277691 | None:intergenic | 25.0% |
| ! | ATTAAACAAAATCAGACTCA+AGG | - | chr6_3:41278033-41278052 | None:intergenic | 25.0% |
| ! | TTTTACAATTTTGTCCTTGG+AGG | + | chr6_3:41273530-41273549 | Msa0951280:intron | 30.0% |
| ! | TTTACAATTTTGTCCTTGGA+GGG | + | chr6_3:41273531-41273550 | Msa0951280:intron | 30.0% |
| ATGAAATAGTTGGAAGTAGT+TGG | - | chr6_3:41273650-41273669 | None:intergenic | 30.0% | |
| AAGACATGCAATGAATAACA+GGG | - | chr6_3:41273737-41273756 | None:intergenic | 30.0% | |
| AAAGACATGCAATGAATAAC+AGG | - | chr6_3:41273738-41273757 | None:intergenic | 30.0% | |
| ! | TGTGATTTTGTTCTGTTATG+AGG | + | chr6_3:41273775-41273794 | Msa0951280:intron | 30.0% |
| TTTAATTGATGTTCTTCCTC+AGG | + | chr6_3:41273799-41273818 | Msa0951280:CDS | 30.0% | |
| ! | GTTCTGATTTTGTGTTTTGT+TGG | + | chr6_3:41273916-41273935 | Msa0951280:intron | 30.0% |
| !! | GTGTTTTTGATTGTTTTGCA+TGG | + | chr6_3:41274019-41274038 | Msa0951280:intron | 30.0% |
| ! | TTTGTTGGTTATCAAGCATA+AGG | + | chr6_3:41274138-41274157 | Msa0951280:intron | 30.0% |
| ! | AGCATAAGGTTTTCTGATTT+TGG | + | chr6_3:41274152-41274171 | Msa0951280:intron | 30.0% |
| AAGCTTAAGTAATTGTGATG+TGG | + | chr6_3:41274287-41274306 | Msa0951280:intron | 30.0% | |
| TTAAGTAATTGTGATGTGGT+TGG | + | chr6_3:41274291-41274310 | Msa0951280:intron | 30.0% | |
| AATCACAAAGAAAAGCCATA+AGG | - | chr6_3:41274336-41274355 | None:intergenic | 30.0% | |
| TGAACAAACTATATCAGTTC+CGG | - | chr6_3:41274380-41274399 | None:intergenic | 30.0% | |
| !! | TAGTTTGTTCATACGAGATT+TGG | + | chr6_3:41274389-41274408 | Msa0951280:intron | 30.0% |
| ! | AGTTTGTTCATACGAGATTT+GGG | + | chr6_3:41274390-41274409 | Msa0951280:intron | 30.0% |
| GGATAAATCATTGGTGTATA+AGG | + | chr6_3:41274428-41274447 | Msa0951280:intron | 30.0% | |
| GTCTTAGAATGAGATTATGA+TGG | + | chr6_3:41274454-41274473 | Msa0951280:intron | 30.0% | |
| GTAGTGTTTGGTACAAAATT+TGG | + | chr6_3:41274476-41274495 | Msa0951280:intron | 30.0% | |
| !! | TACATGCTTTGAAATTTGCT+TGG | + | chr6_3:41274585-41274604 | Msa0951280:intron | 30.0% |
| GTAGTGTTTGGTACAAAATT+TGG | + | chr6_3:41274476-41274495 | Msa0951280:intron | 30.0% | |
| GAACAGTAGAGTTAAATTGA+AGG | + | chr6_3:41274776-41274795 | Msa0951280:intron | 30.0% | |
| GAGTTAAATTGAAGGGTTAA+AGG | + | chr6_3:41274784-41274803 | Msa0951280:intron | 30.0% | |
| !! | TTATCCATTGTGATTTGGTT+TGG | + | chr6_3:41274969-41274988 | Msa0951280:intron | 30.0% |
| ! | AGAAATTGAAGTTTTGCAGA+AGG | + | chr6_3:41275068-41275087 | Msa0951280:intron | 30.0% |
| TAAGCTTAATCTGATTCAGA+AGG | + | chr6_3:41275111-41275130 | Msa0951280:intron | 30.0% | |
| TCAGAAAACACATTAGAAGT+TGG | + | chr6_3:41275344-41275363 | Msa0951280:intron | 30.0% | |
| ! | AGAAAAAGCTATACAGGTTT+TGG | + | chr6_3:41275388-41275407 | Msa0951280:intron | 30.0% |
| !!! | TGTTTTGAGAAAAGTGCTTA+TGG | + | chr6_3:41275460-41275479 | Msa0951280:intron | 30.0% |
| !!! | GTTTTGAGAAAAGTGCTTAT+GGG | + | chr6_3:41275461-41275480 | Msa0951280:intron | 30.0% |
| !!! | TTTTGAGAAAAGTGCTTATG+GGG | + | chr6_3:41275462-41275481 | Msa0951280:intron | 30.0% |
| ATAATCATAAACTACCCAAG+AGG | - | chr6_3:41275574-41275593 | None:intergenic | 30.0% | |
| ATAAAGTTAAGCTCTTTGTC+AGG | + | chr6_3:41275631-41275650 | Msa0951280:intron | 30.0% | |
| ATCATCTTTGCTTATGTTGA+TGG | + | chr6_3:41275670-41275689 | Msa0951280:intron | 30.0% | |
| ATCACTATAGATAGATGTTG+AGG | - | chr6_3:41275784-41275803 | None:intergenic | 30.0% | |
| ATATTGCTTCAATTCATGCA+CGG | - | chr6_3:41275881-41275900 | None:intergenic | 30.0% | |
| ACTTACATGTACAATAAGAC+GGG | - | chr6_3:41276123-41276142 | None:intergenic | 30.0% | |
| GACAAAAGAAAAAACGCAAA+TGG | - | chr6_3:41276213-41276232 | None:intergenic | 30.0% | |
| ! | TTTTCTTTTGTCTGCGTATA+TGG | + | chr6_3:41276221-41276240 | Msa0951280:intron | 30.0% |
| ! | TTTCTTTTGTCTGCGTATAT+GGG | + | chr6_3:41276222-41276241 | Msa0951280:intron | 30.0% |
| TAGAACTTTGTCAGACAAAT+TGG | + | chr6_3:41276271-41276290 | Msa0951280:intron | 30.0% | |
| ! | TTTTGAATAGGATGGTGAAA+TGG | + | chr6_3:41276378-41276397 | Msa0951280:intron | 30.0% |
| GAACTTTGTAAAGTAAAGGA+CGG | + | chr6_3:41276532-41276551 | Msa0951280:intron | 30.0% | |
| TTCTTCTTTCCAAATTTGCA+TGG | - | chr6_3:41277107-41277126 | None:intergenic | 30.0% | |
| ! | TTCATCTGTATACTGTTTTC+CGG | + | chr6_3:41277232-41277251 | Msa0951280:intron | 30.0% |
| !! | TTATTTTTCTCTGGATGAAG+AGG | + | chr6_3:41277615-41277634 | Msa0951280:intron | 30.0% |
| ACAGTCAATAAAGCTATGAA+CGG | + | chr6_3:41277773-41277792 | Msa0951280:intron | 30.0% | |
| ! | AATTCCAATTTTACCATGCA+AGG | - | chr6_3:41277818-41277837 | None:intergenic | 30.0% |
| TCTGACATTAATACAGGTTT+AGG | - | chr6_3:41277965-41277984 | None:intergenic | 30.0% | |
| ! | TTACAATTTTGTCCTTGGAG+GGG | + | chr6_3:41273532-41273551 | Msa0951280:intron | 35.0% |
| TCTCACCCATATATATGTTG+TGG | + | chr6_3:41273581-41273600 | Msa0951280:intron | 35.0% | |
| CCGTACCACAACATATATAT+GGG | - | chr6_3:41273589-41273608 | None:intergenic | 35.0% | |
| CCCATATATATGTTGTGGTA+CGG | + | chr6_3:41273586-41273605 | Msa0951280:intron | 35.0% | |
| ACCGTACCACAACATATATA+TGG | - | chr6_3:41273590-41273609 | None:intergenic | 35.0% | |
| AATAGTTGGAAGTAGTTGGA+AGG | - | chr6_3:41273646-41273665 | None:intergenic | 35.0% | |
| ! | TTGCTTTGCATGTTCTTTTG+TGG | + | chr6_3:41273864-41273883 | Msa0951280:intron | 35.0% |
| ! | TTTTTGTTCCCTGTTATTCC+AGG | + | chr6_3:41273964-41273983 | Msa0951280:intron | 35.0% |
| CAAAGAAACCTGGAATAACA+GGG | - | chr6_3:41273975-41273994 | None:intergenic | 35.0% | |
| ACAAAGAAACCTGGAATAAC+AGG | - | chr6_3:41273976-41273995 | None:intergenic | 35.0% | |
| AGCTCAATAACAAAGAAACC+TGG | - | chr6_3:41273985-41274004 | None:intergenic | 35.0% | |
| !! | TTCTTTGTTATTGAGCTCAG+AGG | + | chr6_3:41273988-41274007 | Msa0951280:CDS | 35.0% |
| !! | TTTGATTGTTTTGCATGGTC+TGG | + | chr6_3:41274024-41274043 | Msa0951280:intron | 35.0% |
| !! | AACTTTTTCTGCAGGTTTGT+TGG | + | chr6_3:41274123-41274142 | Msa0951280:intron | 35.0% |
| !! | GGTTTTCTGATTTTGGTAGT+TGG | + | chr6_3:41274159-41274178 | Msa0951280:intron | 35.0% |
| ! | TTTGAGACCAAGTAACCTTA+TGG | + | chr6_3:41274318-41274337 | Msa0951280:intron | 35.0% |
| AGAAAAGCCATAAGGTTACT+TGG | - | chr6_3:41274328-41274347 | None:intergenic | 35.0% | |
| TTTGGGTGAAAGATGTTGTT+TGG | + | chr6_3:41274407-41274426 | Msa0951280:intron | 35.0% | |
| ! | GAGATTATGATGGTAGTGTT+TGG | + | chr6_3:41274464-41274483 | Msa0951280:intron | 35.0% |
| !! | GTTAACTATGATGATGGCAT+TGG | + | chr6_3:41274560-41274579 | Msa0951280:intron | 35.0% |
| TGCTTGGAATGAGATTATGA+TGG | + | chr6_3:41274601-41274620 | Msa0951280:intron | 35.0% | |
| ! | GAGATTATGATGGTAGTGTT+TGG | + | chr6_3:41274464-41274483 | Msa0951280:intron | 35.0% |
| ! | TTTCTCTCTTTCTGCGATTT+TGG | + | chr6_3:41274741-41274760 | Msa0951280:intron | 35.0% |
| !! | GCGATTTTGGTAATTGATTG+AGG | + | chr6_3:41274754-41274773 | Msa0951280:intron | 35.0% |
| GTAACCAGAGATTCAATTGA+AGG | + | chr6_3:41274816-41274835 | Msa0951280:intron | 35.0% | |
| AAAGCCTTCAATTGAATCTC+TGG | - | chr6_3:41274823-41274842 | None:intergenic | 35.0% | |
| ATTGCCAAACCAAATCACAA+TGG | - | chr6_3:41274976-41274995 | None:intergenic | 35.0% | |
| ! | TTTGGGTAAAAGCTGGATTT+TGG | + | chr6_3:41275033-41275052 | Msa0951280:intron | 35.0% |
| TAATCTGATTCAGAAGGTTG+TGG | + | chr6_3:41275117-41275136 | Msa0951280:intron | 35.0% | |
| TCTAAACTGTAGGGAATTGA+GGG | - | chr6_3:41275290-41275309 | None:intergenic | 35.0% | |
| ATCTAAACTGTAGGGAATTG+AGG | - | chr6_3:41275291-41275310 | None:intergenic | 35.0% | |
| ATCTGCAGAAAAAGCTATAC+AGG | + | chr6_3:41275382-41275401 | Msa0951280:intron | 35.0% | |
| TAGATAGATGTTGAGGTGAT+TGG | - | chr6_3:41275777-41275796 | None:intergenic | 35.0% | |
| TCATGTATTCAGCAGAGTAA+GGG | + | chr6_3:41275914-41275933 | Msa0951280:intron | 35.0% | |
| TGAGCTAGCACAAAAGTTTA+CGG | - | chr6_3:41276169-41276188 | None:intergenic | 35.0% | |
| ! | TTGTCAGACAAATTGGTAGT+TGG | + | chr6_3:41276278-41276297 | Msa0951280:intron | 35.0% |
| ! | TGTCAGACAAATTGGTAGTT+GGG | + | chr6_3:41276279-41276298 | Msa0951280:intron | 35.0% |
| !! | ATTGGTAGTTGGGATTTTGT+CGG | + | chr6_3:41276289-41276308 | Msa0951280:intron | 35.0% |
| ! | ATTTCAGATCCCTTTGAAGA+AGG | + | chr6_3:41276416-41276435 | Msa0951280:CDS | 35.0% |
| ! | ATGTCAATTTGCTTGTACCA+TGG | + | chr6_3:41276631-41276650 | Msa0951280:intron | 35.0% |
| !! | ATGTAGTTTTCTTTCTGGTC+AGG | + | chr6_3:41276766-41276785 | Msa0951280:intron | 35.0% |
| ! | AGAAAGCATAATCATACCTC+TGG | - | chr6_3:41276956-41276975 | None:intergenic | 35.0% |
| AGTAGTCACATCAGTTATGA+TGG | - | chr6_3:41277083-41277102 | None:intergenic | 35.0% | |
| TGACTACTTCCATGCAAATT+TGG | + | chr6_3:41277095-41277114 | Msa0951280:CDS | 35.0% | |
| ! | AACGTTTTTACACACAGAAC+AGG | - | chr6_3:41277139-41277158 | None:intergenic | 35.0% |
| TAGATCAATAGCTTCTTCCT+CGG | - | chr6_3:41277167-41277186 | None:intergenic | 35.0% | |
| ACAGTATACAGATGAAGTCA+AGG | - | chr6_3:41277228-41277247 | None:intergenic | 35.0% | |
| ACTAAGGTGAGACTGATTAT+AGG | + | chr6_3:41277356-41277375 | Msa0951280:intron | 35.0% | |
| ! | ATTTAAGGCCGGAATAGTAT+GGG | + | chr6_3:41277449-41277468 | Msa0951280:CDS | 35.0% |
| ATAAAGCTATGAACGGATCA+TGG | + | chr6_3:41277780-41277799 | Msa0951280:intron | 35.0% | |
| CATTCCTTGCATGGTAAAAT+TGG | + | chr6_3:41277811-41277830 | Msa0951280:intron | 35.0% | |
| TGATAGGGATTAACATGTGT+CGG | + | chr6_3:41277843-41277862 | Msa0951280:intron | 35.0% | |
| ATGTTTCCTTGGTCTGAATT+TGG | + | chr6_3:41277875-41277894 | Msa0951280:intron | 35.0% | |
| TTTATGCCAAATTCAGACCA+AGG | - | chr6_3:41277884-41277903 | None:intergenic | 35.0% | |
| TTGGTCTGAATTTGGCATAA+AGG | + | chr6_3:41277883-41277902 | Msa0951280:intron | 35.0% | |
| TGGTCTGAATTTGGCATAAA+GGG | + | chr6_3:41277884-41277903 | Msa0951280:intron | 35.0% | |
| ATTTGGCATAAAGGGATAGT+TGG | + | chr6_3:41277892-41277911 | Msa0951280:intron | 35.0% | |
| CATAAAGGGATAGTTGGATT+GGG | + | chr6_3:41277898-41277917 | Msa0951280:intron | 35.0% | |
| ACCTGTATTAATGTCAGATC+TGG | + | chr6_3:41277967-41277986 | Msa0951280:intron | 35.0% | |
| AGTACATCTCTGATGAAACA+TGG | + | chr6_3:41278097-41278116 | Msa0951280:CDS | 35.0% | |
| GTACATCTCTGATGAAACAT+GGG | + | chr6_3:41278098-41278117 | Msa0951280:CDS | 35.0% | |
| TACATCTCTGATGAAACATG+GGG | + | chr6_3:41278099-41278118 | Msa0951280:CDS | 35.0% | |
| TTTACGAAAATACCCCTCCA+AGG | - | chr6_3:41273547-41273566 | None:intergenic | 40.0% | |
| !!! | GGAGGGGTATTTTCGTAAAT+TGG | + | chr6_3:41273548-41273567 | Msa0951280:intron | 40.0% |
| ! | GAAGGAAAGCATGAAAGAGT+GGG | - | chr6_3:41273628-41273647 | None:intergenic | 40.0% |
| ! | TGCTTTTGCTAACTTGAGTC+CGG | + | chr6_3:41273673-41273692 | Msa0951280:intron | 40.0% |
| ATGGACAAAGAAGAAGGAAC+CGG | - | chr6_3:41273695-41273714 | None:intergenic | 40.0% | |
| TTGATGTTCTTCCTCAGGTT+CGG | + | chr6_3:41273804-41273823 | Msa0951280:CDS | 40.0% | |
| ! | TCGGTTGATATCAAGCTCAA+AGG | + | chr6_3:41273823-41273842 | Msa0951280:CDS | 40.0% |
| !!! | TGTGATTTTGGTTGTTCTGC+TGG | + | chr6_3:41274920-41274939 | Msa0951280:intron | 40.0% |
| CTGAAAGTTTGGGTAAAAGC+TGG | + | chr6_3:41275026-41275045 | Msa0951280:intron | 40.0% | |
| AGAAGGTAGAAACTATGAGC+TGG | + | chr6_3:41275085-41275104 | Msa0951280:intron | 40.0% | |
| TCATAAACTACCCAAGAGGT+GGG | - | chr6_3:41275570-41275589 | None:intergenic | 40.0% | |
| ATCATAAACTACCCAAGAGG+TGG | - | chr6_3:41275571-41275590 | None:intergenic | 40.0% | |
| TTCAATTCATGCACGGAATC+TGG | - | chr6_3:41275874-41275893 | None:intergenic | 40.0% | |
| CTCATGTATTCAGCAGAGTA+AGG | + | chr6_3:41275913-41275932 | Msa0951280:intron | 40.0% | |
| GTCAGAGTTGCTTGAAACTA+TGG | + | chr6_3:41276058-41276077 | Msa0951280:intron | 40.0% | |
| CAAAAGTTTACGGAAGGAGT+GGG | - | chr6_3:41276159-41276178 | None:intergenic | 40.0% | |
| ACAAAAGTTTACGGAAGGAG+TGG | - | chr6_3:41276160-41276179 | None:intergenic | 40.0% | |
| CTAGCACAAAAGTTTACGGA+AGG | - | chr6_3:41276165-41276184 | None:intergenic | 40.0% | |
| ! | AATTTGCTTGTACCATGGAC+TGG | + | chr6_3:41276636-41276655 | Msa0951280:intron | 40.0% |
| CAATGGCAGCATCTAAAGAA+AGG | + | chr6_3:41277040-41277059 | Msa0951280:CDS | 40.0% | |
| GTCACATCAGTTATGATGGT+TGG | - | chr6_3:41277079-41277098 | None:intergenic | 40.0% | |
| TGTAAAAACGTTTAGCACCG+AGG | + | chr6_3:41277147-41277166 | Msa0951280:CDS | 40.0% | |
| ! | TACTGTTTTCCGGTCATTTG+TGG | + | chr6_3:41277242-41277261 | Msa0951280:intron | 40.0% |
| ! | TTTTCCGGTCATTTGTGGAA+TGG | + | chr6_3:41277247-41277266 | Msa0951280:intron | 40.0% |
| GATACCATTCCACAAATGAC+CGG | - | chr6_3:41277254-41277273 | None:intergenic | 40.0% | |
| AAGATGTGAGCGTGTAACTA+AGG | + | chr6_3:41277340-41277359 | Msa0951280:CDS | 40.0% | |
| AGTTTATCTTGCTCTGATGC+AGG | + | chr6_3:41277425-41277444 | Msa0951280:intron | 40.0% | |
| ! | CATTTAAGGCCGGAATAGTA+TGG | + | chr6_3:41277448-41277467 | Msa0951280:CDS | 40.0% |
| GCAATTGACCCATACTATTC+CGG | - | chr6_3:41277460-41277479 | None:intergenic | 40.0% | |
| ! | GGCATTAAACGTAGTGGTTT+TGG | + | chr6_3:41277513-41277532 | Msa0951280:intron | 40.0% |
| CATACCATTCTCCTAGTTCA+TGG | - | chr6_3:41277539-41277558 | None:intergenic | 40.0% | |
| TAAGGTGAAGTCTAAGTCTG+TGG | + | chr6_3:41277678-41277697 | Msa0951280:intron | 40.0% | |
| GCATAAAGGGATAGTTGGAT+TGG | + | chr6_3:41277897-41277916 | Msa0951280:intron | 40.0% | |
| GCCAGATCTGACATTAATAC+AGG | - | chr6_3:41277971-41277990 | None:intergenic | 40.0% | |
| TATTAATGTCAGATCTGGCG+TGG | + | chr6_3:41277972-41277991 | Msa0951280:intron | 40.0% | |
| ATTAATGTCAGATCTGGCGT+GGG | + | chr6_3:41277973-41277992 | Msa0951280:intron | 40.0% | |
| GACTCAAGGTCAAATAAGAC+AGG | - | chr6_3:41278019-41278038 | None:intergenic | 40.0% | |
| ! | GGAAGGAAAGCATGAAAGAG+TGG | - | chr6_3:41273629-41273648 | None:intergenic | 45.0% |
| CCTGGAATGGACAAAGAAGA+AGG | - | chr6_3:41273701-41273720 | None:intergenic | 45.0% | |
| CCTTCTTCTTTGTCCATTCC+AGG | + | chr6_3:41273698-41273717 | Msa0951280:intron | 45.0% | |
| TCTTTGTCCATTCCAGGTTC+TGG | + | chr6_3:41273704-41273723 | Msa0951280:intron | 45.0% | |
| CTTGATATCAACCGAACCTG+AGG | - | chr6_3:41273818-41273837 | None:intergenic | 45.0% | |
| GTTCTGCTGGAAGAGTAAGT+AGG | + | chr6_3:41274933-41274952 | Msa0951280:intron | 45.0% | |
| ! | GAGGTGGGTTCTACAACTAA+AGG | - | chr6_3:41275555-41275574 | None:intergenic | 45.0% |
| TAGTTGTAGAACCCACCTCT+TGG | + | chr6_3:41275556-41275575 | Msa0951280:intron | 45.0% | |
| AGTTGTAGAACCCACCTCTT+GGG | + | chr6_3:41275557-41275576 | Msa0951280:intron | 45.0% | |
| TTCATGCACGGAATCTGGAA+TGG | - | chr6_3:41275869-41275888 | None:intergenic | 45.0% | |
| ! | ATCCCTTTGAAGAAGGTTGC+AGG | + | chr6_3:41276423-41276442 | Msa0951280:CDS | 45.0% |
| AGCCTGCAACCTTCTTCAAA+GGG | - | chr6_3:41276428-41276447 | None:intergenic | 45.0% | |
| TAGCCTGCAACCTTCTTCAA+AGG | - | chr6_3:41276429-41276448 | None:intergenic | 45.0% | |
| TTTGAAGAAGGTTGCAGGCT+AGG | + | chr6_3:41276428-41276447 | Msa0951280:CDS | 45.0% | |
| CTAGGACCTGTTGTTAGTGA+AGG | + | chr6_3:41276446-41276465 | Msa0951280:CDS | 45.0% | |
| ACCTGTTGTTAGTGAAGGAC+AGG | + | chr6_3:41276451-41276470 | Msa0951280:CDS | 45.0% | |
| ACCTGTCCTTCACTAACAAC+AGG | - | chr6_3:41276455-41276474 | None:intergenic | 45.0% | |
| ! | GGAAGCTTTATACCAGTCCA+TGG | - | chr6_3:41276651-41276670 | None:intergenic | 45.0% |
| !! | AGCTTCCTGAGAAGCACTAT+TGG | + | chr6_3:41276664-41276683 | Msa0951280:intron | 45.0% |
| !!! | GTGCGACAATTTTGACTGGT+GGG | + | chr6_3:41276924-41276943 | Msa0951280:CDS | 45.0% |
| CTGTGCAAGTGTGTTCAGTT+AGG | + | chr6_3:41276974-41276993 | Msa0951280:intron | 45.0% | |
| ACTTTGGTCCTCTACAGCTA+TGG | + | chr6_3:41277284-41277303 | Msa0951280:intron | 45.0% | |
| TGCTCTGATGCAGGCATTTA+AGG | + | chr6_3:41277434-41277453 | Msa0951280:intron | 45.0% | |
| !!! | AGTGGTTTTGGCCATGAACT+AGG | + | chr6_3:41277525-41277544 | Msa0951280:intron | 45.0% |
| TTGGCCATGAACTAGGAGAA+TGG | + | chr6_3:41277532-41277551 | Msa0951280:intron | 45.0% | |
| TGATCACTACACTGTCAGCA+GGG | - | chr6_3:41277724-41277743 | None:intergenic | 45.0% | |
| ATGATCACTACACTGTCAGC+AGG | - | chr6_3:41277725-41277744 | None:intergenic | 45.0% | |
| GGCACATTTGCATGTTTCCT+TGG | + | chr6_3:41277864-41277883 | Msa0951280:intron | 45.0% | |
| TCTCTGATGAAACATGGGGA+TGG | + | chr6_3:41278103-41278122 | Msa0951280:CDS | 45.0% | |
| ! | GTCCATTCCAGGTTCTGGTT+CGG | + | chr6_3:41273709-41273728 | Msa0951280:intron | 50.0% |
| AACCGAACCAGAACCTGGAA+TGG | - | chr6_3:41273714-41273733 | None:intergenic | 50.0% | |
| AAGTGCTTATGGGGCATAGC+AGG | + | chr6_3:41275471-41275490 | Msa0951280:intron | 50.0% | |
| GGCATAGCAGGAGCTGAAAT+GGG | + | chr6_3:41275483-41275502 | Msa0951280:intron | 50.0% | |
| ! | GGAATCTGGAATGGCGTCAA+TGG | - | chr6_3:41275860-41275879 | None:intergenic | 50.0% |
| !! | TCCTGAGAAGCACTATTGGC+TGG | + | chr6_3:41276668-41276687 | Msa0951280:intron | 50.0% |
| ACCAGCCAATAGTGCTTCTC+AGG | - | chr6_3:41276672-41276691 | None:intergenic | 50.0% | |
| !! | GAGAAGCACTATTGGCTGGT+TGG | + | chr6_3:41276672-41276691 | Msa0951280:intron | 50.0% |
| TGTCTCGAACGCTAAGAGTG+AGG | + | chr6_3:41276901-41276920 | Msa0951280:CDS | 50.0% | |
| GTCTCGAACGCTAAGAGTGA+GGG | + | chr6_3:41276902-41276921 | Msa0951280:CDS | 50.0% | |
| !! | GAGGGTGCGACAATTTTGAC+TGG | + | chr6_3:41276920-41276939 | Msa0951280:CDS | 50.0% |
| !!! | GGTGCGACAATTTTGACTGG+TGG | + | chr6_3:41276923-41276942 | Msa0951280:CDS | 50.0% |
| GTCCTCTACAGCTATGGCTT+AGG | + | chr6_3:41277290-41277309 | Msa0951280:intron | 50.0% | |
| CACCTAAGCCATAGCTGTAG+AGG | - | chr6_3:41277295-41277314 | None:intergenic | 50.0% | |
| ! | CTGATGCAGGCATTTAAGGC+CGG | + | chr6_3:41277438-41277457 | Msa0951280:intron | 50.0% |
| ATGCTTCACTCAAGCGCCAT+GGG | + | chr6_3:41277488-41277507 | Msa0951280:CDS | 50.0% | |
| CTACGTTTAATGCCTCCCCA+TGG | - | chr6_3:41277507-41277526 | None:intergenic | 50.0% | |
| !! | TGGGGAGGCATTAAACGTAG+TGG | + | chr6_3:41277507-41277526 | Msa0951280:CDS | 50.0% |
| CTATGAACGGATCATGGCAC+TGG | + | chr6_3:41277786-41277805 | Msa0951280:intron | 50.0% | |
| GGGCATAGCAGGAGCTGAAA+TGG | + | chr6_3:41275482-41275501 | Msa0951280:intron | 55.0% | |
| CATGGCGCTTGAGTGAAGCA+TGG | - | chr6_3:41277489-41277508 | None:intergenic | 55.0% | |
| CATGCTTCACTCAAGCGCCA+TGG | + | chr6_3:41277487-41277506 | Msa0951280:CDS | 55.0% | |
| TGCTTCACTCAAGCGCCATG+GGG | + | chr6_3:41277489-41277508 | Msa0951280:CDS | 55.0% | |
| ! | GCACTGGTGCATTCCTTGCA+TGG | + | chr6_3:41277802-41277821 | Msa0951280:intron | 55.0% |
| CAGGGAACCGAACCAGAACC+TGG | - | chr6_3:41273719-41273738 | None:intergenic | 60.0% | |
| TTCACTCAAGCGCCATGGGG+AGG | + | chr6_3:41277492-41277511 | Msa0951280:CDS | 60.0% | |
| ! | GACTGGTGGGTCTCGACCAG+AGG | + | chr6_3:41276937-41276956 | Msa0951280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 41273515 | 41278149 | 41273515 | ID=Msa0951280;Name=Msa0951280 |
| chr6_3 | mRNA | 41273515 | 41278149 | 41273515 | ID=Msa0951280-mRNA-1;Parent=Msa0951280;Name=Msa0951280-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.22|0.1|0.5|1|1|10|0|254 |
| chr6_3 | exon | 41273515 | 41273520 | 41273515 | ID=Msa0951280-mRNA-1:exon:9836;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41273797 | 41273844 | 41273797 | ID=Msa0951280-mRNA-1:exon:9837;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41273986 | 41274009 | 41273986 | ID=Msa0951280-mRNA-1:exon:9838;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41275832 | 41275917 | 41275832 | ID=Msa0951280-mRNA-1:exon:9839;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41276388 | 41276472 | 41276388 | ID=Msa0951280-mRNA-1:exon:9840;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41276881 | 41276958 | 41276881 | ID=Msa0951280-mRNA-1:exon:9841;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41276992 | 41277200 | 41276992 | ID=Msa0951280-mRNA-1:exon:9842;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41277301 | 41277361 | 41277301 | ID=Msa0951280-mRNA-1:exon:9843;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41277447 | 41277528 | 41277447 | ID=Msa0951280-mRNA-1:exon:9844;Parent=Msa0951280-mRNA-1 |
| chr6_3 | exon | 41278064 | 41278149 | 41278064 | ID=Msa0951280-mRNA-1:exon:9845;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41273515 | 41273520 | 41273515 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41273797 | 41273844 | 41273797 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41273986 | 41274009 | 41273986 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41275832 | 41275917 | 41275832 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41276388 | 41276472 | 41276388 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41276881 | 41276958 | 41276881 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41276992 | 41277200 | 41276992 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41277301 | 41277361 | 41277301 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41277447 | 41277528 | 41277447 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| chr6_3 | CDS | 41278064 | 41278149 | 41278064 | ID=Msa0951280-mRNA-1:cds;Parent=Msa0951280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
