Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333600 | ACJ85836.1 | 86.957 | 184 | 5 | 1 | 27 | 210 | 65 | 229 | 8.72e-107 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333600 | sp|Q93YB2|AADH2_PEA | 84.239 | 184 | 10 | 1 | 27 | 210 | 311 | 475 | 2.26e-106 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0333600 | 0.822690 | 2.069365e-53 | -8.615850e-47 |
| Msa0017510 | Msa0333600 | 0.803906 | 2.787438e-49 | -8.615850e-47 |
| Msa0046100 | Msa0333600 | 0.806900 | 6.572216e-50 | -8.615850e-47 |
| Msa0091600 | Msa0333600 | 0.880657 | 4.581155e-70 | -8.615850e-47 |
| Msa0094120 | Msa0333600 | 0.800814 | 1.208198e-48 | -8.615850e-47 |
| Msa0131770 | Msa0333600 | 0.819565 | 1.086586e-52 | -8.615850e-47 |
| Msa0140960 | Msa0333600 | 0.804786 | 1.827591e-49 | -8.615850e-47 |
| Msa0146260 | Msa0333600 | 0.811076 | 8.389307e-51 | -8.615850e-47 |
| Msa0157290 | Msa0333600 | 0.803165 | 3.969844e-49 | -8.615850e-47 |
| Msa0195630 | Msa0333600 | 0.801935 | 7.120440e-49 | -8.615850e-47 |
| Msa0195980 | Msa0333600 | 0.804548 | 2.048561e-49 | -8.615850e-47 |
| Msa0211150 | Msa0333600 | 0.832824 | 7.580644e-56 | -8.615850e-47 |
| Msa0218810 | Msa0333600 | 0.800793 | 1.220205e-48 | -8.615850e-47 |
| Msa0223690 | Msa0333600 | 0.802361 | 5.818735e-49 | -8.615850e-47 |
| Msa0225740 | Msa0333600 | 0.802608 | 5.176139e-49 | -8.615850e-47 |
| Msa0230150 | Msa0333600 | 0.813799 | 2.131956e-51 | -8.615850e-47 |
| Msa0283640 | Msa0333600 | 0.850535 | 1.594307e-60 | -8.615850e-47 |
| Msa0305700 | Msa0333600 | 0.806221 | 9.140547e-50 | -8.615850e-47 |
| Msa0316800 | Msa0333600 | 0.802658 | 5.054238e-49 | -8.615850e-47 |
| Msa0333600 | Msa0341540 | 0.819302 | 1.247041e-52 | -8.615850e-47 |
| Msa0333600 | Msa0376350 | 0.800039 | 1.737210e-48 | -8.615850e-47 |
| Msa0333600 | Msa0405130 | 0.810368 | 1.193408e-50 | -8.615850e-47 |
| Msa0333600 | Msa0410650 | 0.810148 | 1.331471e-50 | -8.615850e-47 |
| Msa0333600 | Msa0417880 | 0.808282 | 3.343098e-50 | -8.615850e-47 |
| Msa0333600 | Msa0423900 | 0.820198 | 7.786820e-53 | -8.615850e-47 |
| Msa0333600 | Msa0428080 | 0.800540 | 1.374052e-48 | -8.615850e-47 |
| Msa0333600 | Msa0452960 | 0.804990 | 1.656731e-49 | -8.615850e-47 |
| Msa0333600 | Msa0464680 | 0.800049 | 1.728948e-48 | -8.615850e-47 |
| Msa0333600 | Msa0467490 | 0.800022 | 1.751117e-48 | -8.615850e-47 |
| Msa0333600 | Msa0479170 | 0.820458 | 6.785402e-53 | -8.615850e-47 |
| Msa0333600 | Msa0484780 | 0.814161 | 1.774189e-51 | -8.615850e-47 |
| Msa0333600 | Msa0495320 | 0.810385 | 1.183132e-50 | -8.615850e-47 |
| Msa0333600 | Msa0503060 | 0.801212 | 1.001638e-48 | -8.615850e-47 |
| Msa0333600 | Msa0507680 | 0.813355 | 2.669407e-51 | -8.615850e-47 |
| Msa0333600 | Msa0523460 | 0.804990 | 1.656411e-49 | -8.615850e-47 |
| Msa0333600 | Msa0546540 | 0.884367 | 2.037429e-71 | -8.615850e-47 |
| Msa0333600 | Msa0557070 | 0.813108 | 3.024421e-51 | -8.615850e-47 |
| Msa0333600 | Msa0596800 | 0.801878 | 7.314725e-49 | -8.615850e-47 |
| Msa0333600 | Msa0601750 | 0.804187 | 2.437030e-49 | -8.615850e-47 |
| Msa0333600 | Msa0604510 | 0.812020 | 5.230364e-51 | -8.615850e-47 |
| Msa0333600 | Msa0641670 | 0.806546 | 7.804883e-50 | -8.615850e-47 |
| Msa0333600 | Msa0643180 | 0.809356 | 1.970707e-50 | -8.615850e-47 |
| Msa0333600 | Msa0677410 | 0.825391 | 4.809124e-54 | -8.615850e-47 |
| Msa0333600 | Msa0681270 | 0.804027 | 2.630426e-49 | -8.615850e-47 |
| Msa0333600 | Msa0683510 | 0.801433 | 9.023346e-49 | -8.615850e-47 |
| Msa0333600 | Msa0693380 | 0.820313 | 7.328724e-53 | -8.615850e-47 |
| Msa0333600 | Msa0731270 | 0.883601 | 3.908008e-71 | -8.615850e-47 |
| Msa0333600 | Msa0731940 | 0.806083 | 9.771630e-50 | -8.615850e-47 |
| Msa0333600 | Msa0743730 | 0.801442 | 8.988674e-49 | -8.615850e-47 |
| Msa0333600 | Msa0744040 | 0.815121 | 1.087142e-51 | -8.615850e-47 |
| Msa0333600 | Msa0767300 | 0.801469 | 8.872510e-49 | -8.615850e-47 |
| Msa0333600 | Msa0771280 | 0.882314 | 1.156174e-70 | -8.615850e-47 |
| Msa0333600 | Msa0811130 | 0.839496 | 1.530483e-57 | -8.615850e-47 |
| Msa0333600 | Msa0832340 | 0.808479 | 3.035619e-50 | -8.615850e-47 |
| Msa0333600 | Msa0841340 | 0.814531 | 1.468983e-51 | -8.615850e-47 |
| Msa0333600 | Msa0848530 | 0.884115 | 2.525225e-71 | -8.615850e-47 |
| Msa0333600 | Msa0850960 | 0.800493 | 1.404695e-48 | -8.615850e-47 |
| Msa0333600 | Msa0865060 | 0.944696 | 1.212417e-103 | -8.615850e-47 |
| Msa0333600 | Msa0868440 | 0.800892 | 1.164239e-48 | -8.615850e-47 |
| Msa0333600 | Msa0876190 | 0.803788 | 2.949896e-49 | -8.615850e-47 |
| Msa0333600 | Msa0880140 | 0.801187 | 1.013420e-48 | -8.615850e-47 |
| Msa0333600 | Msa0884290 | 0.846564 | 2.006093e-59 | -8.615850e-47 |
| Msa0333600 | Msa0935670 | 0.801082 | 1.064695e-48 | -8.615850e-47 |
| Msa0333600 | Msa0947660 | 0.806054 | 9.907879e-50 | -8.615850e-47 |
| Msa0333600 | Msa0951280 | 0.842868 | 1.988129e-58 | -8.615850e-47 |
| Msa0333600 | Msa0953550 | 0.800970 | 1.122380e-48 | -8.615850e-47 |
| Msa0333600 | Msa0954550 | 0.811465 | 6.908032e-51 | -8.615850e-47 |
| Msa0333600 | Msa0969520 | 0.835370 | 1.746148e-56 | -8.615850e-47 |
| Msa0333600 | Msa0969810 | 0.803065 | 4.164689e-49 | -8.615850e-47 |
| Msa0333600 | Msa0990350 | 0.806732 | 7.131301e-50 | -8.615850e-47 |
| Msa0333600 | Msa1004840 | 0.805071 | 1.593167e-49 | -8.615850e-47 |
| Msa0333600 | Msa1059960 | 0.800968 | 1.123818e-48 | -8.615850e-47 |
| Msa0333600 | Msa1082500 | 0.823085 | 1.674862e-53 | -8.615850e-47 |
| Msa0333600 | Msa1085200 | 0.815130 | 1.082366e-51 | -8.615850e-47 |
| Msa0333600 | Msa1098120 | 0.804526 | 2.070561e-49 | -8.615850e-47 |
| Msa0333600 | Msa1102770 | 0.813627 | 2.325672e-51 | -8.615850e-47 |
| Msa0333600 | Msa1104370 | 0.803476 | 3.423362e-49 | -8.615850e-47 |
| Msa0333600 | Msa1121490 | 0.805938 | 1.048074e-49 | -8.615850e-47 |
| Msa0333600 | Msa1130550 | 0.800135 | 1.661261e-48 | -8.615850e-47 |
| Msa0333600 | Msa1137570 | 0.810633 | 1.046124e-50 | -8.615850e-47 |
| Msa0333600 | Msa1145810 | 0.800740 | 1.250934e-48 | -8.615850e-47 |
| Msa0333600 | Msa1147280 | 0.824702 | 6.996667e-54 | -8.615850e-47 |
| Msa0333600 | Msa1151910 | 0.803924 | 2.763541e-49 | -8.615850e-47 |
| Msa0333600 | Msa1154710 | 0.828410 | 9.128604e-55 | -8.615850e-47 |
| Msa0333600 | Msa1199570 | 0.812583 | 3.940389e-51 | -8.615850e-47 |
| Msa0333600 | Msa1209460 | 0.806695 | 7.259512e-50 | -8.615850e-47 |
| Msa0333600 | Msa1236100 | 0.807483 | 4.945355e-50 | -8.615850e-47 |
| Msa0333600 | Msa1328710 | 0.820201 | 7.772205e-53 | -8.615850e-47 |
| Msa0333600 | Msa1341520 | 0.827805 | 1.277089e-54 | -8.615850e-47 |
| Msa0333600 | Msa1343070 | 0.803753 | 2.998617e-49 | -8.615850e-47 |
| Msa0333600 | Msa1346370 | 0.804573 | 2.024615e-49 | -8.615850e-47 |
| Msa0333600 | Msa1353470 | 0.824872 | 6.378481e-54 | -8.615850e-47 |
| Msa0333600 | Msa1360980 | 0.803492 | 3.396695e-49 | -8.615850e-47 |
| Msa0333600 | Msa1368430 | 0.800537 | 1.375669e-48 | -8.615850e-47 |
| Msa0333600 | Msa1374040 | 0.801730 | 7.843701e-49 | -8.615850e-47 |
| Msa0333600 | Msa1375560 | 0.829957 | 3.848275e-55 | -8.615850e-47 |
| Msa0333600 | Msa1394380 | 0.807020 | 6.196415e-50 | -8.615850e-47 |
| Msa0333600 | Msa1422580 | 0.803988 | 2.680606e-49 | -8.615850e-47 |
| Msa0333600 | Msa1435270 | 0.822710 | 2.048297e-53 | -8.615850e-47 |
| Msa0333600 | Msa1452240 | 0.807071 | 6.045463e-50 | -8.615850e-47 |
| Msa0333600 | Msa1464810 | 0.803799 | 2.933514e-49 | -8.615850e-47 |
| Msa0333600 | Msa1466540 | 0.815831 | 7.556235e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333600 | MtrunA17_Chr4g0059521 | 87.500 | 184 | 4 | 1 | 27 | 210 | 311 | 475 | 3.82e-110 | 325 |
| Msa0333600 | MtrunA17_Chr3g0118121 | 71.795 | 195 | 33 | 3 | 17 | 210 | 302 | 475 | 1.44e-94 | 285 |
| Msa0333600 | MtrunA17_Chr3g0118081 | 73.481 | 181 | 29 | 1 | 30 | 210 | 344 | 505 | 2.36e-91 | 278 |
| Msa0333600 | MtrunA17_Chr6g0485301 | 37.870 | 169 | 84 | 2 | 39 | 207 | 332 | 479 | 6.02e-37 | 135 |
| Msa0333600 | MtrunA17_Chr6g0485311 | 37.572 | 173 | 87 | 1 | 35 | 207 | 326 | 477 | 1.76e-36 | 133 |
| Msa0333600 | MtrunA17_Chr8g0390631 | 37.870 | 169 | 84 | 2 | 39 | 207 | 324 | 471 | 9.81e-36 | 131 |
| Msa0333600 | MtrunA17_Chr8g0390651 | 37.278 | 169 | 85 | 2 | 39 | 207 | 333 | 480 | 5.69e-35 | 129 |
| Msa0333600 | MtrunA17_Chr8g0365221 | 38.012 | 171 | 85 | 2 | 39 | 209 | 371 | 520 | 3.08e-33 | 125 |
| Msa0333600 | MtrunA17_Chr2g0310091 | 36.464 | 181 | 94 | 1 | 30 | 210 | 360 | 519 | 1.03e-32 | 124 |
| Msa0333600 | MtrunA17_Chr3g0117861 | 37.870 | 169 | 84 | 2 | 39 | 207 | 372 | 519 | 8.57e-32 | 121 |
| Msa0333600 | MtrunA17_Chr4g0059221 | 36.095 | 169 | 87 | 2 | 39 | 207 | 374 | 521 | 1.23e-29 | 115 |
| Msa0333600 | MtrunA17_Chr2g0294411 | 32.402 | 179 | 94 | 3 | 32 | 204 | 354 | 511 | 4.83e-22 | 94.0 |
| Msa0333600 | MtrunA17_Chr2g0300801 | 32.804 | 189 | 94 | 6 | 35 | 215 | 326 | 489 | 1.27e-16 | 78.2 |
| Msa0333600 | MtrunA17_Chr2g0279751 | 28.302 | 159 | 97 | 2 | 29 | 187 | 310 | 451 | 2.33e-14 | 71.6 |
| Msa0333600 | MtrunA17_Chr4g0049641 | 27.848 | 158 | 97 | 2 | 30 | 187 | 338 | 478 | 8.85e-14 | 69.7 |
| Msa0333600 | MtrunA17_Chr4g0074171 | 28.485 | 165 | 93 | 2 | 42 | 205 | 329 | 469 | 8.74e-13 | 66.6 |
| Msa0333600 | MtrunA17_Chr1g0149961 | 26.667 | 165 | 96 | 2 | 42 | 205 | 329 | 469 | 1.76e-11 | 63.2 |
| Msa0333600 | MtrunA17_Chr8g0372381 | 25.592 | 211 | 128 | 5 | 1 | 209 | 244 | 427 | 8.23e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333600 | AT1G74920.2 | 72.821 | 195 | 31 | 3 | 17 | 210 | 297 | 470 | 6.11e-97 | 291 |
| Msa0333600 | AT1G74920.1 | 72.821 | 195 | 31 | 3 | 17 | 210 | 302 | 475 | 7.91e-97 | 291 |
| Msa0333600 | AT3G48170.1 | 71.271 | 181 | 33 | 1 | 30 | 210 | 314 | 475 | 1.73e-91 | 278 |
| Msa0333600 | AT3G24503.1 | 41.040 | 173 | 81 | 2 | 35 | 207 | 327 | 478 | 3.47e-37 | 135 |
| Msa0333600 | AT1G79440.1 | 37.288 | 177 | 90 | 1 | 34 | 210 | 355 | 510 | 2.39e-32 | 123 |
| Msa0333600 | AT1G23800.1 | 35.294 | 170 | 89 | 2 | 38 | 207 | 363 | 511 | 2.10e-30 | 117 |
| Msa0333600 | AT3G48000.1 | 36.095 | 169 | 87 | 1 | 39 | 207 | 368 | 515 | 3.17e-30 | 117 |
| Msa0333600 | AT3G66658.1 | 31.868 | 182 | 97 | 3 | 32 | 207 | 354 | 514 | 3.67e-22 | 94.7 |
| Msa0333600 | AT3G66658.2 | 31.868 | 182 | 97 | 3 | 32 | 207 | 354 | 514 | 3.76e-22 | 94.7 |
| Msa0333600 | AT2G14170.3 | 26.667 | 195 | 122 | 4 | 30 | 222 | 410 | 585 | 1.31e-15 | 75.5 |
| Msa0333600 | AT1G54100.2 | 31.373 | 204 | 112 | 6 | 17 | 215 | 308 | 488 | 1.90e-15 | 75.1 |
| Msa0333600 | AT1G54100.1 | 31.373 | 204 | 112 | 6 | 17 | 215 | 308 | 488 | 1.90e-15 | 75.1 |
| Msa0333600 | AT2G14170.2 | 29.114 | 158 | 95 | 2 | 30 | 187 | 301 | 441 | 1.47e-14 | 72.4 |
| Msa0333600 | AT2G14170.1 | 29.114 | 158 | 95 | 2 | 30 | 187 | 410 | 550 | 1.87e-14 | 72.4 |
| Msa0333600 | AT4G36250.1 | 27.083 | 192 | 113 | 6 | 21 | 209 | 262 | 429 | 2.85e-11 | 62.8 |
Find 47 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTGATGCAGGCATTTA+AGG | 0.134214 | 2_4:-51500585 | Msa0333600:intron |
| ATTTGGAAAGAAGAAGTATT+TGG | 0.232708 | 2_4:-51500907 | Msa0333600:CDS |
| TGACTACTTCCATGCAAATT+TGG | 0.235483 | 2_4:-51500924 | Msa0333600:CDS |
| GGCATTAAACGTAGTGGTTT+TGG | 0.252055 | 2_4:-51500506 | Msa0333600:CDS |
| CATTTAAGGCCGGAATAGTA+TGG | 0.290640 | 2_4:-51500571 | Msa0333600:CDS |
| TTCAATTCATGCACGGAATC+TGG | 0.312219 | 2_4:+51502148 | None:intergenic |
| ATCCCTTGGAAGAAGGTTGC+AGG | 0.381818 | 2_4:-51501596 | Msa0333600:CDS |
| ACAATTGACCCATACTATTC+CGG | 0.405962 | 2_4:+51500562 | None:intergenic |
| CATCAAAATTTCAGATCCCT+TGG | 0.421001 | 2_4:-51501610 | Msa0333600:CDS |
| CAAAACATAATCAATTATCA+TGG | 0.440732 | 2_4:+51501008 | None:intergenic |
| ATTTCAGATCCCTTGGAAGA+AGG | 0.459280 | 2_4:-51501603 | Msa0333600:CDS |
| ATGCTTCACTCAAGCGCCAT+GGG | 0.461661 | 2_4:-51500531 | Msa0333600:CDS |
| GTCCTCTACAGCTATGGCTT+AGG | 0.463601 | 2_4:-51500729 | Msa0333600:intron |
| TTGGAAGAAGGTTGCAGGCT+AGG | 0.466614 | 2_4:-51501591 | Msa0333600:CDS |
| ACCTGTTGTTAGTGAAGGGC+AGG | 0.473564 | 2_4:-51501568 | Msa0333600:intron |
| GGAATCTGGAATGGCGTCAA+TGG | 0.475294 | 2_4:+51502162 | None:intergenic |
| ACCTGCCCTTCACTAACAAC+AGG | 0.480135 | 2_4:+51501567 | None:intergenic |
| GTCACATCAGTTATGATGGT+TGG | 0.495328 | 2_4:+51500943 | None:intergenic |
| TTCTTCTTTCCAAATTTGCA+TGG | 0.496084 | 2_4:+51500915 | None:intergenic |
| AAGATGTGAGCGTGTAACTA+AGG | 0.508552 | 2_4:-51500679 | Msa0333600:intron |
| CAATGGCAACATCTAAAGAA+AGG | 0.514049 | 2_4:-51500979 | Msa0333600:CDS |
| CATGCTTCACTCAAGCGCCA+TGG | 0.516509 | 2_4:-51500532 | Msa0333600:CDS |
| GTACATCTCTGATGAACCAT+GGG | 0.525895 | 2_4:-51499921 | Msa0333600:exon |
| AGTAGTCACATCAGTTATGA+TGG | 0.526637 | 2_4:+51500939 | None:intergenic |
| CATACCATTCTCCTAGTTCA+CGG | 0.538382 | 2_4:+51500483 | None:intergenic |
| TAGCCTGCAACCTTCTTCCA+AGG | 0.540093 | 2_4:+51501593 | None:intergenic |
| CTAGGACCTGTTGTTAGTGA+AGG | 0.541728 | 2_4:-51501573 | Msa0333600:CDS |
| TTGGCCGTGAACTAGGAGAA+TGG | 0.556599 | 2_4:-51500487 | Msa0333600:intron |
| GACTGGTGGGTCTCGACCAG+AGG | 0.561492 | 2_4:-51501082 | Msa0333600:intron |
| TTCACTCAAGCGCCATGGGG+AGG | 0.564185 | 2_4:-51500527 | Msa0333600:CDS |
| CTGATGCAGGCATTTAAGGC+CGG | 0.567654 | 2_4:-51500581 | Msa0333600:intron |
| GTCTCGAACGCTAAGAGTGA+GGG | 0.574738 | 2_4:-51501117 | Msa0333600:CDS |
| TTCATGCACGGAATCTGGAA+TGG | 0.586797 | 2_4:+51502153 | None:intergenic |
| TAGGACCTGTTGTTAGTGAA+GGG | 0.592104 | 2_4:-51501572 | Msa0333600:CDS |
| TAGATCAATAGCTTCTTCCT+CGG | 0.596377 | 2_4:+51500855 | None:intergenic |
| AGCCTGCAACCTTCTTCCAA+GGG | 0.599460 | 2_4:+51501594 | None:intergenic |
| ATTTAAGGCCGGAATAGTAT+GGG | 0.604605 | 2_4:-51500570 | Msa0333600:CDS |
| GGAGGTTGGTACCATCCCCA+TGG | 0.607677 | 2_4:+51499905 | None:intergenic |
| TGTCTCGAACGCTAAGAGTG+AGG | 0.614021 | 2_4:-51501118 | Msa0333600:CDS |
| AGTACATCTCTGATGAACCA+TGG | 0.616407 | 2_4:-51499922 | Msa0333600:exon |
| ATATTGCTTCAATTCATGCA+CGG | 0.618950 | 2_4:+51502141 | None:intergenic |
| TGGGGAGGCATTAAACGTAG+TGG | 0.638861 | 2_4:-51500512 | Msa0333600:CDS |
| CTACGTTTAATGCCTCCCCA+TGG | 0.639138 | 2_4:+51500515 | None:intergenic |
| CATGGCGCTTGAGTGAAGCA+TGG | 0.643282 | 2_4:+51500533 | None:intergenic |
| TGCTTCACTCAAGCGCCATG+GGG | 0.659834 | 2_4:-51500530 | Msa0333600:CDS |
| TCTCTGATGAACCATGGGGA+TGG | 0.668208 | 2_4:-51499916 | Msa0333600:exon |
| TACATCTCTGATGAACCATG+GGG | 0.778050 | 2_4:-51499920 | Msa0333600:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAATAAATAAAAAGAT+AGG | + | chr2_4:51501656-51501675 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAATATTTTTAAC+AGG | - | chr2_4:51502093-51502112 | Msa0333600:intron | 10.0% |
| !!! | TTTGTTTAATATTTTTAACA+GGG | - | chr2_4:51502094-51502113 | Msa0333600:intron | 10.0% |
| !! | AGAAAAATAAATAAAAAGAT+AGG | + | chr2_4:51501656-51501675 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAATATTTTTAAC+AGG | - | chr2_4:51502093-51502112 | Msa0333600:intron | 10.0% |
| !!! | TTTGTTTAATATTTTTAACA+GGG | - | chr2_4:51502094-51502113 | Msa0333600:intron | 10.0% |
| !!! | TCTTTTTATTTATTTTTCTC+TGG | - | chr2_4:51501657-51501676 | Msa0333600:intron | 15.0% |
| !!! | TTGTTTAATATTTTTAACAG+GGG | - | chr2_4:51502095-51502114 | Msa0333600:intron | 15.0% |
| !!! | TCTTTTTATTTATTTTTCTC+TGG | - | chr2_4:51501657-51501676 | Msa0333600:intron | 15.0% |
| !!! | TTGTTTAATATTTTTAACAG+GGG | - | chr2_4:51502095-51502114 | Msa0333600:intron | 15.0% |
| !! | AAATAATTCAACATAATGGT+TGG | - | chr2_4:51500005-51500024 | Msa0333600:intron | 20.0% |
| !! | AAAGTAAATATTCACTCAAA+GGG | + | chr2_4:51500036-51500055 | None:intergenic | 20.0% |
| !! | TAAGATACTCTTATTATTTC+AGG | - | chr2_4:51500388-51500407 | Msa0333600:intron | 20.0% |
| !!! | TAGCAACATAATTTTTGAAT+AGG | - | chr2_4:51500417-51500436 | Msa0333600:intron | 20.0% |
| !! | CATATTCAATGAAAATGTAT+TGG | - | chr2_4:51500636-51500655 | Msa0333600:intron | 20.0% |
| !! | TGTATGTATAATTTATGAGA+AGG | - | chr2_4:51500754-51500773 | Msa0333600:intron | 20.0% |
| !! | TATTCTGTATTCACATTATA+TGG | - | chr2_4:51500904-51500923 | Msa0333600:CDS | 20.0% |
| !! | CAAAACATAATCAATTATCA+TGG | + | chr2_4:51501065-51501084 | None:intergenic | 20.0% |
| !! | CAAGAAAACAACTAAATAAT+TGG | - | chr2_4:51501434-51501453 | Msa0333600:intron | 20.0% |
| !! | AATAAAAAGATAGGCATTTA+AGG | + | chr2_4:51501647-51501666 | None:intergenic | 20.0% |
| !! | AAAAGAAACCCATAATTATA+AGG | - | chr2_4:51501711-51501730 | Msa0333600:intron | 20.0% |
| !! | AAATTGGAATTATACATGAT+AGG | - | chr2_4:51501878-51501897 | Msa0333600:intron | 20.0% |
| !! | AATTGGAATTATACATGATA+GGG | - | chr2_4:51501879-51501898 | Msa0333600:intron | 20.0% |
| !! | AAATAATTCAACATAATGGT+TGG | - | chr2_4:51500005-51500024 | Msa0333600:intron | 20.0% |
| !! | AAAGTAAATATTCACTCAAA+GGG | + | chr2_4:51500036-51500055 | None:intergenic | 20.0% |
| !! | TAAGATACTCTTATTATTTC+AGG | - | chr2_4:51500388-51500407 | Msa0333600:intron | 20.0% |
| !!! | TAGCAACATAATTTTTGAAT+AGG | - | chr2_4:51500417-51500436 | Msa0333600:intron | 20.0% |
| !! | CATATTCAATGAAAATGTAT+TGG | - | chr2_4:51500636-51500655 | Msa0333600:intron | 20.0% |
| !! | TGTATGTATAATTTATGAGA+AGG | - | chr2_4:51500754-51500773 | Msa0333600:intron | 20.0% |
| !! | TATTCTGTATTCACATTATA+TGG | - | chr2_4:51500904-51500923 | Msa0333600:CDS | 20.0% |
| !! | CAAAACATAATCAATTATCA+TGG | + | chr2_4:51501065-51501084 | None:intergenic | 20.0% |
| !! | CAAGAAAACAACTAAATAAT+TGG | - | chr2_4:51501434-51501453 | Msa0333600:intron | 20.0% |
| !! | AATAAAAAGATAGGCATTTA+AGG | + | chr2_4:51501647-51501666 | None:intergenic | 20.0% |
| !! | AAAAGAAACCCATAATTATA+AGG | - | chr2_4:51501711-51501730 | Msa0333600:intron | 20.0% |
| !! | AAATTGGAATTATACATGAT+AGG | - | chr2_4:51501878-51501897 | Msa0333600:intron | 20.0% |
| !! | AATTGGAATTATACATGATA+GGG | - | chr2_4:51501879-51501898 | Msa0333600:intron | 20.0% |
| ! | GCTCAAATAATTCAACATAA+TGG | - | chr2_4:51500001-51500020 | Msa0333600:intron | 25.0% |
| ! | CAAAGTAAATATTCACTCAA+AGG | + | chr2_4:51500037-51500056 | None:intergenic | 25.0% |
| !!! | ATGGTTCTACATTTTGAATA+TGG | - | chr2_4:51500128-51500147 | Msa0333600:intron | 25.0% |
| ! | TACTTACATGTACAATAAGA+CGG | + | chr2_4:51500175-51500194 | None:intergenic | 25.0% |
| ! | GACAAAAGAAAAAATGCAAA+TGG | + | chr2_4:51500264-51500283 | None:intergenic | 25.0% |
| !! | TTTTGAATAGGATGATGAAA+TGG | - | chr2_4:51500429-51500448 | Msa0333600:intron | 25.0% |
| ! | TTCTGAACTTTGTAAAGTAA+AGG | - | chr2_4:51500579-51500598 | Msa0333600:intron | 25.0% |
| ! | ATAATTTATGAGAAGGAAGA+AGG | - | chr2_4:51500761-51500780 | Msa0333600:intron | 25.0% |
| ! | AGAAAGAAAACTACATTATG+TGG | + | chr2_4:51500813-51500832 | None:intergenic | 25.0% |
| !! | ACATAATGTAGTTTTCTTTC+TGG | - | chr2_4:51500812-51500831 | Msa0333600:intron | 25.0% |
| ! | TGATTCTAAACATATTTGTC+TGG | - | chr2_4:51500858-51500877 | Msa0333600:CDS | 25.0% |
| !! | ATTATGTTTTGCAAATGCAA+TGG | - | chr2_4:51501074-51501093 | Msa0333600:intron | 25.0% |
| !!! | ATTTGGAAAGAAGAAGTATT+TGG | - | chr2_4:51501163-51501182 | Msa0333600:intron | 25.0% |
| ! | GGTATCTAAGTTATATACTT+TGG | - | chr2_4:51501319-51501338 | Msa0333600:intron | 25.0% |
| ! | AGACTTCACCTTATAATTAT+GGG | + | chr2_4:51501722-51501741 | None:intergenic | 25.0% |
| ! | TAGACTTCACCTTATAATTA+TGG | + | chr2_4:51501723-51501742 | None:intergenic | 25.0% |
| ! | ATTAAACAAAATCAGACTCA+AGG | + | chr2_4:51502084-51502103 | None:intergenic | 25.0% |
| ! | GCTCAAATAATTCAACATAA+TGG | - | chr2_4:51500001-51500020 | Msa0333600:intron | 25.0% |
| ! | CAAAGTAAATATTCACTCAA+AGG | + | chr2_4:51500037-51500056 | None:intergenic | 25.0% |
| !!! | ATGGTTCTACATTTTGAATA+TGG | - | chr2_4:51500128-51500147 | Msa0333600:intron | 25.0% |
| ! | TACTTACATGTACAATAAGA+CGG | + | chr2_4:51500175-51500194 | None:intergenic | 25.0% |
| ! | GACAAAAGAAAAAATGCAAA+TGG | + | chr2_4:51500264-51500283 | None:intergenic | 25.0% |
| !! | TTTTGAATAGGATGATGAAA+TGG | - | chr2_4:51500429-51500448 | Msa0333600:intron | 25.0% |
| ! | TTCTGAACTTTGTAAAGTAA+AGG | - | chr2_4:51500579-51500598 | Msa0333600:intron | 25.0% |
| ! | ATAATTTATGAGAAGGAAGA+AGG | - | chr2_4:51500761-51500780 | Msa0333600:intron | 25.0% |
| ! | AGAAAGAAAACTACATTATG+TGG | + | chr2_4:51500813-51500832 | None:intergenic | 25.0% |
| !! | ACATAATGTAGTTTTCTTTC+TGG | - | chr2_4:51500812-51500831 | Msa0333600:intron | 25.0% |
| ! | TGATTCTAAACATATTTGTC+TGG | - | chr2_4:51500858-51500877 | Msa0333600:CDS | 25.0% |
| !! | ATTATGTTTTGCAAATGCAA+TGG | - | chr2_4:51501074-51501093 | Msa0333600:intron | 25.0% |
| !!! | ATTTGGAAAGAAGAAGTATT+TGG | - | chr2_4:51501163-51501182 | Msa0333600:intron | 25.0% |
| ! | GGTATCTAAGTTATATACTT+TGG | - | chr2_4:51501319-51501338 | Msa0333600:intron | 25.0% |
| ! | AGACTTCACCTTATAATTAT+GGG | + | chr2_4:51501722-51501741 | None:intergenic | 25.0% |
| ! | TAGACTTCACCTTATAATTA+TGG | + | chr2_4:51501723-51501742 | None:intergenic | 25.0% |
| ! | ATTAAACAAAATCAGACTCA+AGG | + | chr2_4:51502084-51502103 | None:intergenic | 25.0% |
| ATATTGCTTCAATTCATGCA+CGG | + | chr2_4:51499932-51499951 | None:intergenic | 30.0% | |
| ACTTACATGTACAATAAGAC+GGG | + | chr2_4:51500174-51500193 | None:intergenic | 30.0% | |
| ! | TTTTCTTTTGTCTGCGTATA+TGG | - | chr2_4:51500272-51500291 | Msa0333600:intron | 30.0% |
| ! | TTTCTTTTGTCTGCGTATAT+GGG | - | chr2_4:51500273-51500292 | Msa0333600:intron | 30.0% |
| TAGAACTTTGTCAGACAAAT+TGG | - | chr2_4:51500322-51500341 | Msa0333600:intron | 30.0% | |
| GAACTTTGTAAAGTAAAGGA+CGG | - | chr2_4:51500583-51500602 | Msa0333600:intron | 30.0% | |
| TTCTTCTTTCCAAATTTGCA+TGG | + | chr2_4:51501158-51501177 | None:intergenic | 30.0% | |
| ! | TTCATCTGTATACTCTTTTC+CGG | - | chr2_4:51501283-51501302 | Msa0333600:intron | 30.0% |
| !! | TTATTTTTCTCTGGATGAAG+AGG | - | chr2_4:51501666-51501685 | Msa0333600:intron | 30.0% |
| ACAGTCAATAAAGCTATGAA+CGG | - | chr2_4:51501824-51501843 | Msa0333600:intron | 30.0% | |
| ! | AATTCCAATTTTACCATGCA+AGG | + | chr2_4:51501869-51501888 | None:intergenic | 30.0% |
| TCTGACATTAATACAGGTTT+AGG | + | chr2_4:51502016-51502035 | None:intergenic | 30.0% | |
| !! | GATACATATCATAGTTTTGC+AGG | + | chr2_4:51502189-51502208 | None:intergenic | 30.0% |
| ATATTGCTTCAATTCATGCA+CGG | + | chr2_4:51499932-51499951 | None:intergenic | 30.0% | |
| ACTTACATGTACAATAAGAC+GGG | + | chr2_4:51500174-51500193 | None:intergenic | 30.0% | |
| ! | TTTTCTTTTGTCTGCGTATA+TGG | - | chr2_4:51500272-51500291 | Msa0333600:intron | 30.0% |
| ! | TTTCTTTTGTCTGCGTATAT+GGG | - | chr2_4:51500273-51500292 | Msa0333600:intron | 30.0% |
| TAGAACTTTGTCAGACAAAT+TGG | - | chr2_4:51500322-51500341 | Msa0333600:intron | 30.0% | |
| GAACTTTGTAAAGTAAAGGA+CGG | - | chr2_4:51500583-51500602 | Msa0333600:intron | 30.0% | |
| TTCTTCTTTCCAAATTTGCA+TGG | + | chr2_4:51501158-51501177 | None:intergenic | 30.0% | |
| ! | TTCATCTGTATACTCTTTTC+CGG | - | chr2_4:51501283-51501302 | Msa0333600:intron | 30.0% |
| !! | TTATTTTTCTCTGGATGAAG+AGG | - | chr2_4:51501666-51501685 | Msa0333600:intron | 30.0% |
| ACAGTCAATAAAGCTATGAA+CGG | - | chr2_4:51501824-51501843 | Msa0333600:intron | 30.0% | |
| ! | AATTCCAATTTTACCATGCA+AGG | + | chr2_4:51501869-51501888 | None:intergenic | 30.0% |
| TCTGACATTAATACAGGTTT+AGG | + | chr2_4:51502016-51502035 | None:intergenic | 30.0% | |
| !! | GATACATATCATAGTTTTGC+AGG | + | chr2_4:51502189-51502208 | None:intergenic | 30.0% |
| TCATGTATTCAGCAGAGTAA+GGG | - | chr2_4:51499965-51499984 | Msa0333600:intron | 35.0% | |
| TGAGCTAGCACAAAAGTTTA+CGG | + | chr2_4:51500220-51500239 | None:intergenic | 35.0% | |
| ! | TTGTCAGACAAATTGGTAGT+TGG | - | chr2_4:51500329-51500348 | Msa0333600:intron | 35.0% |
| ! | TGTCAGACAAATTGGTAGTT+GGG | - | chr2_4:51500330-51500349 | Msa0333600:intron | 35.0% |
| !! | ATTGGTAGTTGGGATTTTGT+CGG | - | chr2_4:51500340-51500359 | Msa0333600:intron | 35.0% |
| CATCAAAATTTCAGATCCCT+TGG | - | chr2_4:51500460-51500479 | Msa0333600:intron | 35.0% | |
| ! | ATGTCAATTTGCTTGTACCA+TGG | - | chr2_4:51500682-51500701 | Msa0333600:CDS | 35.0% |
| !! | ATGTAGTTTTCTTTCTGGTC+AGG | - | chr2_4:51500817-51500836 | Msa0333600:intron | 35.0% |
| ! | AGAAAGCATAATCATACCTC+TGG | + | chr2_4:51501007-51501026 | None:intergenic | 35.0% |
| CAATGGCAACATCTAAAGAA+AGG | - | chr2_4:51501091-51501110 | Msa0333600:CDS | 35.0% | |
| AGTAGTCACATCAGTTATGA+TGG | + | chr2_4:51501134-51501153 | None:intergenic | 35.0% | |
| TGACTACTTCCATGCAAATT+TGG | - | chr2_4:51501146-51501165 | Msa0333600:intron | 35.0% | |
| ! | AACGTTTTTACACACAGAAC+AGG | + | chr2_4:51501190-51501209 | None:intergenic | 35.0% |
| TAGATCAATAGCTTCTTCCT+CGG | + | chr2_4:51501218-51501237 | None:intergenic | 35.0% | |
| ACTAAGGTGAGACTGATTAT+AGG | - | chr2_4:51501407-51501426 | Msa0333600:intron | 35.0% | |
| ! | ATTTAAGGCCGGAATAGTAT+GGG | - | chr2_4:51501500-51501519 | Msa0333600:intron | 35.0% |
| ACAATTGACCCATACTATTC+CGG | + | chr2_4:51501511-51501530 | None:intergenic | 35.0% | |
| ATAAAGCTATGAACGGATCA+TGG | - | chr2_4:51501831-51501850 | Msa0333600:intron | 35.0% | |
| CATTCCTTGCATGGTAAAAT+TGG | - | chr2_4:51501862-51501881 | Msa0333600:intron | 35.0% | |
| ATGTTTCCTTGGTCTGAATT+TGG | - | chr2_4:51501926-51501945 | Msa0333600:intron | 35.0% | |
| TTTATGCCAAATTCAGACCA+AGG | + | chr2_4:51501935-51501954 | None:intergenic | 35.0% | |
| TTGGTCTGAATTTGGCATAA+AGG | - | chr2_4:51501934-51501953 | Msa0333600:intron | 35.0% | |
| TGGTCTGAATTTGGCATAAA+GGG | - | chr2_4:51501935-51501954 | Msa0333600:intron | 35.0% | |
| ATTTGGCATAAAGGGATAGT+TGG | - | chr2_4:51501943-51501962 | Msa0333600:intron | 35.0% | |
| CATAAAGGGATAGTTGGATT+GGG | - | chr2_4:51501949-51501968 | Msa0333600:intron | 35.0% | |
| ACCTGTATTAATGTCAGATC+TGG | - | chr2_4:51502018-51502037 | Msa0333600:intron | 35.0% | |
| !! | ACATATCATAGTTTTGCAGG+AGG | + | chr2_4:51502186-51502205 | None:intergenic | 35.0% |
| TCATGTATTCAGCAGAGTAA+GGG | - | chr2_4:51499965-51499984 | Msa0333600:intron | 35.0% | |
| TGAGCTAGCACAAAAGTTTA+CGG | + | chr2_4:51500220-51500239 | None:intergenic | 35.0% | |
| ! | TTGTCAGACAAATTGGTAGT+TGG | - | chr2_4:51500329-51500348 | Msa0333600:intron | 35.0% |
| ! | TGTCAGACAAATTGGTAGTT+GGG | - | chr2_4:51500330-51500349 | Msa0333600:intron | 35.0% |
| !! | ATTGGTAGTTGGGATTTTGT+CGG | - | chr2_4:51500340-51500359 | Msa0333600:intron | 35.0% |
| CATCAAAATTTCAGATCCCT+TGG | - | chr2_4:51500460-51500479 | Msa0333600:intron | 35.0% | |
| ! | ATGTCAATTTGCTTGTACCA+TGG | - | chr2_4:51500682-51500701 | Msa0333600:CDS | 35.0% |
| !! | ATGTAGTTTTCTTTCTGGTC+AGG | - | chr2_4:51500817-51500836 | Msa0333600:intron | 35.0% |
| ! | AGAAAGCATAATCATACCTC+TGG | + | chr2_4:51501007-51501026 | None:intergenic | 35.0% |
| CAATGGCAACATCTAAAGAA+AGG | - | chr2_4:51501091-51501110 | Msa0333600:CDS | 35.0% | |
| AGTAGTCACATCAGTTATGA+TGG | + | chr2_4:51501134-51501153 | None:intergenic | 35.0% | |
| TGACTACTTCCATGCAAATT+TGG | - | chr2_4:51501146-51501165 | Msa0333600:intron | 35.0% | |
| ! | AACGTTTTTACACACAGAAC+AGG | + | chr2_4:51501190-51501209 | None:intergenic | 35.0% |
| TAGATCAATAGCTTCTTCCT+CGG | + | chr2_4:51501218-51501237 | None:intergenic | 35.0% | |
| ACTAAGGTGAGACTGATTAT+AGG | - | chr2_4:51501407-51501426 | Msa0333600:intron | 35.0% | |
| ! | ATTTAAGGCCGGAATAGTAT+GGG | - | chr2_4:51501500-51501519 | Msa0333600:intron | 35.0% |
| ACAATTGACCCATACTATTC+CGG | + | chr2_4:51501511-51501530 | None:intergenic | 35.0% | |
| ATAAAGCTATGAACGGATCA+TGG | - | chr2_4:51501831-51501850 | Msa0333600:intron | 35.0% | |
| CATTCCTTGCATGGTAAAAT+TGG | - | chr2_4:51501862-51501881 | Msa0333600:intron | 35.0% | |
| ATGTTTCCTTGGTCTGAATT+TGG | - | chr2_4:51501926-51501945 | Msa0333600:intron | 35.0% | |
| TTTATGCCAAATTCAGACCA+AGG | + | chr2_4:51501935-51501954 | None:intergenic | 35.0% | |
| TTGGTCTGAATTTGGCATAA+AGG | - | chr2_4:51501934-51501953 | Msa0333600:intron | 35.0% | |
| TGGTCTGAATTTGGCATAAA+GGG | - | chr2_4:51501935-51501954 | Msa0333600:intron | 35.0% | |
| ATTTGGCATAAAGGGATAGT+TGG | - | chr2_4:51501943-51501962 | Msa0333600:intron | 35.0% | |
| CATAAAGGGATAGTTGGATT+GGG | - | chr2_4:51501949-51501968 | Msa0333600:intron | 35.0% | |
| ACCTGTATTAATGTCAGATC+TGG | - | chr2_4:51502018-51502037 | Msa0333600:intron | 35.0% | |
| !! | ACATATCATAGTTTTGCAGG+AGG | + | chr2_4:51502186-51502205 | None:intergenic | 35.0% |
| TTCAATTCATGCACGGAATC+TGG | + | chr2_4:51499925-51499944 | None:intergenic | 40.0% | |
| CTCATGTATTCAGCAGAGTA+AGG | - | chr2_4:51499964-51499983 | Msa0333600:intron | 40.0% | |
| GTCAGAGTTGCTTGAAACTA+TGG | - | chr2_4:51500109-51500128 | Msa0333600:intron | 40.0% | |
| CAAAAGTTTACGGAAGGAGT+GGG | + | chr2_4:51500210-51500229 | None:intergenic | 40.0% | |
| ACAAAAGTTTACGGAAGGAG+TGG | + | chr2_4:51500211-51500230 | None:intergenic | 40.0% | |
| CTAGCACAAAAGTTTACGGA+AGG | + | chr2_4:51500216-51500235 | None:intergenic | 40.0% | |
| ATTTCAGATCCCTTGGAAGA+AGG | - | chr2_4:51500467-51500486 | Msa0333600:intron | 40.0% | |
| TAGGACCTGTTGTTAGTGAA+GGG | - | chr2_4:51500498-51500517 | Msa0333600:CDS | 40.0% | |
| ! | AATTTGCTTGTACCATGGAC+TGG | - | chr2_4:51500687-51500706 | Msa0333600:CDS | 40.0% |
| GTCACATCAGTTATGATGGT+TGG | + | chr2_4:51501130-51501149 | None:intergenic | 40.0% | |
| TGTAAAAACGTTTAGCACCG+AGG | - | chr2_4:51501198-51501217 | Msa0333600:intron | 40.0% | |
| ! | TACTCTTTTCCGGTCATTTG+TGG | - | chr2_4:51501293-51501312 | Msa0333600:intron | 40.0% |
| ! | TTTTCCGGTCATTTGTGGAA+TGG | - | chr2_4:51501298-51501317 | Msa0333600:intron | 40.0% |
| GATACCATTCCACAAATGAC+CGG | + | chr2_4:51501305-51501324 | None:intergenic | 40.0% | |
| AAGATGTGAGCGTGTAACTA+AGG | - | chr2_4:51501391-51501410 | Msa0333600:intron | 40.0% | |
| AGTTTATCTTGCTCTGATGC+AGG | - | chr2_4:51501476-51501495 | Msa0333600:intron | 40.0% | |
| ! | CATTTAAGGCCGGAATAGTA+TGG | - | chr2_4:51501499-51501518 | Msa0333600:intron | 40.0% |
| ! | GGCATTAAACGTAGTGGTTT+TGG | - | chr2_4:51501564-51501583 | Msa0333600:intron | 40.0% |
| CATACCATTCTCCTAGTTCA+CGG | + | chr2_4:51501590-51501609 | None:intergenic | 40.0% | |
| TAAGGTGAAGTCTAAGTCTG+TGG | - | chr2_4:51501729-51501748 | Msa0333600:intron | 40.0% | |
| GACACATTTGCATGTTTCCT+TGG | - | chr2_4:51501915-51501934 | Msa0333600:intron | 40.0% | |
| GCATAAAGGGATAGTTGGAT+TGG | - | chr2_4:51501948-51501967 | Msa0333600:intron | 40.0% | |
| GCCAGATCTGACATTAATAC+AGG | + | chr2_4:51502022-51502041 | None:intergenic | 40.0% | |
| TATTAATGTCAGATCTGGCG+TGG | - | chr2_4:51502023-51502042 | Msa0333600:intron | 40.0% | |
| ATTAATGTCAGATCTGGCGT+GGG | - | chr2_4:51502024-51502043 | Msa0333600:intron | 40.0% | |
| GACTCAAGGTCAAATAAGAC+AGG | + | chr2_4:51502070-51502089 | None:intergenic | 40.0% | |
| AGTACATCTCTGATGAACCA+TGG | - | chr2_4:51502148-51502167 | Msa0333600:CDS | 40.0% | |
| GTACATCTCTGATGAACCAT+GGG | - | chr2_4:51502149-51502168 | Msa0333600:CDS | 40.0% | |
| TACATCTCTGATGAACCATG+GGG | - | chr2_4:51502150-51502169 | Msa0333600:CDS | 40.0% | |
| !! | ATCATAGTTTTGCAGGAGGT+TGG | + | chr2_4:51502182-51502201 | None:intergenic | 40.0% |
| TTCAATTCATGCACGGAATC+TGG | + | chr2_4:51499925-51499944 | None:intergenic | 40.0% | |
| CTCATGTATTCAGCAGAGTA+AGG | - | chr2_4:51499964-51499983 | Msa0333600:intron | 40.0% | |
| GTCAGAGTTGCTTGAAACTA+TGG | - | chr2_4:51500109-51500128 | Msa0333600:intron | 40.0% | |
| CAAAAGTTTACGGAAGGAGT+GGG | + | chr2_4:51500210-51500229 | None:intergenic | 40.0% | |
| ACAAAAGTTTACGGAAGGAG+TGG | + | chr2_4:51500211-51500230 | None:intergenic | 40.0% | |
| CTAGCACAAAAGTTTACGGA+AGG | + | chr2_4:51500216-51500235 | None:intergenic | 40.0% | |
| ATTTCAGATCCCTTGGAAGA+AGG | - | chr2_4:51500467-51500486 | Msa0333600:intron | 40.0% | |
| TAGGACCTGTTGTTAGTGAA+GGG | - | chr2_4:51500498-51500517 | Msa0333600:CDS | 40.0% | |
| ! | AATTTGCTTGTACCATGGAC+TGG | - | chr2_4:51500687-51500706 | Msa0333600:CDS | 40.0% |
| GTCACATCAGTTATGATGGT+TGG | + | chr2_4:51501130-51501149 | None:intergenic | 40.0% | |
| TGTAAAAACGTTTAGCACCG+AGG | - | chr2_4:51501198-51501217 | Msa0333600:intron | 40.0% | |
| ! | TACTCTTTTCCGGTCATTTG+TGG | - | chr2_4:51501293-51501312 | Msa0333600:intron | 40.0% |
| ! | TTTTCCGGTCATTTGTGGAA+TGG | - | chr2_4:51501298-51501317 | Msa0333600:intron | 40.0% |
| GATACCATTCCACAAATGAC+CGG | + | chr2_4:51501305-51501324 | None:intergenic | 40.0% | |
| AAGATGTGAGCGTGTAACTA+AGG | - | chr2_4:51501391-51501410 | Msa0333600:intron | 40.0% | |
| AGTTTATCTTGCTCTGATGC+AGG | - | chr2_4:51501476-51501495 | Msa0333600:intron | 40.0% | |
| ! | CATTTAAGGCCGGAATAGTA+TGG | - | chr2_4:51501499-51501518 | Msa0333600:intron | 40.0% |
| ! | GGCATTAAACGTAGTGGTTT+TGG | - | chr2_4:51501564-51501583 | Msa0333600:intron | 40.0% |
| CATACCATTCTCCTAGTTCA+CGG | + | chr2_4:51501590-51501609 | None:intergenic | 40.0% | |
| TAAGGTGAAGTCTAAGTCTG+TGG | - | chr2_4:51501729-51501748 | Msa0333600:intron | 40.0% | |
| GACACATTTGCATGTTTCCT+TGG | - | chr2_4:51501915-51501934 | Msa0333600:intron | 40.0% | |
| GCATAAAGGGATAGTTGGAT+TGG | - | chr2_4:51501948-51501967 | Msa0333600:intron | 40.0% | |
| GCCAGATCTGACATTAATAC+AGG | + | chr2_4:51502022-51502041 | None:intergenic | 40.0% | |
| TATTAATGTCAGATCTGGCG+TGG | - | chr2_4:51502023-51502042 | Msa0333600:intron | 40.0% | |
| ATTAATGTCAGATCTGGCGT+GGG | - | chr2_4:51502024-51502043 | Msa0333600:intron | 40.0% | |
| GACTCAAGGTCAAATAAGAC+AGG | + | chr2_4:51502070-51502089 | None:intergenic | 40.0% | |
| AGTACATCTCTGATGAACCA+TGG | - | chr2_4:51502148-51502167 | Msa0333600:CDS | 40.0% | |
| GTACATCTCTGATGAACCAT+GGG | - | chr2_4:51502149-51502168 | Msa0333600:CDS | 40.0% | |
| TACATCTCTGATGAACCATG+GGG | - | chr2_4:51502150-51502169 | Msa0333600:CDS | 40.0% | |
| !! | ATCATAGTTTTGCAGGAGGT+TGG | + | chr2_4:51502182-51502201 | None:intergenic | 40.0% |
| TTCATGCACGGAATCTGGAA+TGG | + | chr2_4:51499920-51499939 | None:intergenic | 45.0% | |
| CTAGGACCTGTTGTTAGTGA+AGG | - | chr2_4:51500497-51500516 | Msa0333600:CDS | 45.0% | |
| ! | GGAAGCTTTATACCAGTCCA+TGG | + | chr2_4:51500702-51500721 | None:intergenic | 45.0% |
| !! | AGCTTCCTGAGAAGCACTAT+TGG | - | chr2_4:51500715-51500734 | Msa0333600:CDS | 45.0% |
| !!! | GTGCGACAATTTTGACTGGT+GGG | - | chr2_4:51500975-51500994 | Msa0333600:CDS | 45.0% |
| CTGTGCAAGTGTGTTCAGTT+AGG | - | chr2_4:51501025-51501044 | Msa0333600:CDS | 45.0% | |
| ACTTTGGTCCTCTACAGCTA+TGG | - | chr2_4:51501335-51501354 | Msa0333600:intron | 45.0% | |
| TGCTCTGATGCAGGCATTTA+AGG | - | chr2_4:51501485-51501504 | Msa0333600:intron | 45.0% | |
| TGATCACTACACTGTCAGCA+GGG | + | chr2_4:51501775-51501794 | None:intergenic | 45.0% | |
| ATGATCACTACACTGTCAGC+AGG | + | chr2_4:51501776-51501795 | None:intergenic | 45.0% | |
| TTCATGCACGGAATCTGGAA+TGG | + | chr2_4:51499920-51499939 | None:intergenic | 45.0% | |
| CTAGGACCTGTTGTTAGTGA+AGG | - | chr2_4:51500497-51500516 | Msa0333600:CDS | 45.0% | |
| ! | GGAAGCTTTATACCAGTCCA+TGG | + | chr2_4:51500702-51500721 | None:intergenic | 45.0% |
| !! | AGCTTCCTGAGAAGCACTAT+TGG | - | chr2_4:51500715-51500734 | Msa0333600:CDS | 45.0% |
| !!! | GTGCGACAATTTTGACTGGT+GGG | - | chr2_4:51500975-51500994 | Msa0333600:CDS | 45.0% |
| CTGTGCAAGTGTGTTCAGTT+AGG | - | chr2_4:51501025-51501044 | Msa0333600:CDS | 45.0% | |
| ACTTTGGTCCTCTACAGCTA+TGG | - | chr2_4:51501335-51501354 | Msa0333600:intron | 45.0% | |
| TGCTCTGATGCAGGCATTTA+AGG | - | chr2_4:51501485-51501504 | Msa0333600:intron | 45.0% | |
| TGATCACTACACTGTCAGCA+GGG | + | chr2_4:51501775-51501794 | None:intergenic | 45.0% | |
| ATGATCACTACACTGTCAGC+AGG | + | chr2_4:51501776-51501795 | None:intergenic | 45.0% | |
| ! | GGAATCTGGAATGGCGTCAA+TGG | + | chr2_4:51499911-51499930 | None:intergenic | 50.0% |
| ATCCCTTGGAAGAAGGTTGC+AGG | - | chr2_4:51500474-51500493 | Msa0333600:intron | 50.0% | |
| AGCCTGCAACCTTCTTCCAA+GGG | + | chr2_4:51500479-51500498 | None:intergenic | 50.0% | |
| TAGCCTGCAACCTTCTTCCA+AGG | + | chr2_4:51500480-51500499 | None:intergenic | 50.0% | |
| TTGGAAGAAGGTTGCAGGCT+AGG | - | chr2_4:51500479-51500498 | Msa0333600:intron | 50.0% | |
| ACCTGTTGTTAGTGAAGGGC+AGG | - | chr2_4:51500502-51500521 | Msa0333600:CDS | 50.0% | |
| ACCTGCCCTTCACTAACAAC+AGG | + | chr2_4:51500506-51500525 | None:intergenic | 50.0% | |
| !! | TCCTGAGAAGCACTATTGGC+TGG | - | chr2_4:51500719-51500738 | Msa0333600:CDS | 50.0% |
| ACCAGCCAATAGTGCTTCTC+AGG | + | chr2_4:51500723-51500742 | None:intergenic | 50.0% | |
| !! | GAGAAGCACTATTGGCTGGT+TGG | - | chr2_4:51500723-51500742 | Msa0333600:intron | 50.0% |
| TGTCTCGAACGCTAAGAGTG+AGG | - | chr2_4:51500952-51500971 | Msa0333600:CDS | 50.0% | |
| GTCTCGAACGCTAAGAGTGA+GGG | - | chr2_4:51500953-51500972 | Msa0333600:CDS | 50.0% | |
| !! | GAGGGTGCGACAATTTTGAC+TGG | - | chr2_4:51500971-51500990 | Msa0333600:CDS | 50.0% |
| !!! | GGTGCGACAATTTTGACTGG+TGG | - | chr2_4:51500974-51500993 | Msa0333600:CDS | 50.0% |
| GTCCTCTACAGCTATGGCTT+AGG | - | chr2_4:51501341-51501360 | Msa0333600:intron | 50.0% | |
| CACCTAAGCCATAGCTGTAG+AGG | + | chr2_4:51501346-51501365 | None:intergenic | 50.0% | |
| ! | CTGATGCAGGCATTTAAGGC+CGG | - | chr2_4:51501489-51501508 | Msa0333600:intron | 50.0% |
| ATGCTTCACTCAAGCGCCAT+GGG | - | chr2_4:51501539-51501558 | Msa0333600:intron | 50.0% | |
| CTACGTTTAATGCCTCCCCA+TGG | + | chr2_4:51501558-51501577 | None:intergenic | 50.0% | |
| !! | TGGGGAGGCATTAAACGTAG+TGG | - | chr2_4:51501558-51501577 | Msa0333600:intron | 50.0% |
| !!! | AGTGGTTTTGGCCGTGAACT+AGG | - | chr2_4:51501576-51501595 | Msa0333600:CDS | 50.0% |
| TTGGCCGTGAACTAGGAGAA+TGG | - | chr2_4:51501583-51501602 | Msa0333600:CDS | 50.0% | |
| CTATGAACGGATCATGGCAC+TGG | - | chr2_4:51501837-51501856 | Msa0333600:intron | 50.0% | |
| TCTCTGATGAACCATGGGGA+TGG | - | chr2_4:51502154-51502173 | Msa0333600:CDS | 50.0% | |
| ! | GGAATCTGGAATGGCGTCAA+TGG | + | chr2_4:51499911-51499930 | None:intergenic | 50.0% |
| ATCCCTTGGAAGAAGGTTGC+AGG | - | chr2_4:51500474-51500493 | Msa0333600:intron | 50.0% | |
| AGCCTGCAACCTTCTTCCAA+GGG | + | chr2_4:51500479-51500498 | None:intergenic | 50.0% | |
| TAGCCTGCAACCTTCTTCCA+AGG | + | chr2_4:51500480-51500499 | None:intergenic | 50.0% | |
| TTGGAAGAAGGTTGCAGGCT+AGG | - | chr2_4:51500479-51500498 | Msa0333600:intron | 50.0% | |
| ACCTGTTGTTAGTGAAGGGC+AGG | - | chr2_4:51500502-51500521 | Msa0333600:CDS | 50.0% | |
| ACCTGCCCTTCACTAACAAC+AGG | + | chr2_4:51500506-51500525 | None:intergenic | 50.0% | |
| !! | TCCTGAGAAGCACTATTGGC+TGG | - | chr2_4:51500719-51500738 | Msa0333600:CDS | 50.0% |
| ACCAGCCAATAGTGCTTCTC+AGG | + | chr2_4:51500723-51500742 | None:intergenic | 50.0% | |
| !! | GAGAAGCACTATTGGCTGGT+TGG | - | chr2_4:51500723-51500742 | Msa0333600:intron | 50.0% |
| TGTCTCGAACGCTAAGAGTG+AGG | - | chr2_4:51500952-51500971 | Msa0333600:CDS | 50.0% | |
| GTCTCGAACGCTAAGAGTGA+GGG | - | chr2_4:51500953-51500972 | Msa0333600:CDS | 50.0% | |
| !! | GAGGGTGCGACAATTTTGAC+TGG | - | chr2_4:51500971-51500990 | Msa0333600:CDS | 50.0% |
| !!! | GGTGCGACAATTTTGACTGG+TGG | - | chr2_4:51500974-51500993 | Msa0333600:CDS | 50.0% |
| GTCCTCTACAGCTATGGCTT+AGG | - | chr2_4:51501341-51501360 | Msa0333600:intron | 50.0% | |
| CACCTAAGCCATAGCTGTAG+AGG | + | chr2_4:51501346-51501365 | None:intergenic | 50.0% | |
| ! | CTGATGCAGGCATTTAAGGC+CGG | - | chr2_4:51501489-51501508 | Msa0333600:intron | 50.0% |
| ATGCTTCACTCAAGCGCCAT+GGG | - | chr2_4:51501539-51501558 | Msa0333600:intron | 50.0% | |
| CTACGTTTAATGCCTCCCCA+TGG | + | chr2_4:51501558-51501577 | None:intergenic | 50.0% | |
| !! | TGGGGAGGCATTAAACGTAG+TGG | - | chr2_4:51501558-51501577 | Msa0333600:intron | 50.0% |
| !!! | AGTGGTTTTGGCCGTGAACT+AGG | - | chr2_4:51501576-51501595 | Msa0333600:CDS | 50.0% |
| TTGGCCGTGAACTAGGAGAA+TGG | - | chr2_4:51501583-51501602 | Msa0333600:CDS | 50.0% | |
| CTATGAACGGATCATGGCAC+TGG | - | chr2_4:51501837-51501856 | Msa0333600:intron | 50.0% | |
| TCTCTGATGAACCATGGGGA+TGG | - | chr2_4:51502154-51502173 | Msa0333600:CDS | 50.0% | |
| CATGGCGCTTGAGTGAAGCA+TGG | + | chr2_4:51501540-51501559 | None:intergenic | 55.0% | |
| CATGCTTCACTCAAGCGCCA+TGG | - | chr2_4:51501538-51501557 | Msa0333600:intron | 55.0% | |
| TGCTTCACTCAAGCGCCATG+GGG | - | chr2_4:51501540-51501559 | Msa0333600:intron | 55.0% | |
| ! | GCACTGGTGCATTCCTTGCA+TGG | - | chr2_4:51501853-51501872 | Msa0333600:intron | 55.0% |
| CATGGCGCTTGAGTGAAGCA+TGG | + | chr2_4:51501540-51501559 | None:intergenic | 55.0% | |
| CATGCTTCACTCAAGCGCCA+TGG | - | chr2_4:51501538-51501557 | Msa0333600:intron | 55.0% | |
| TGCTTCACTCAAGCGCCATG+GGG | - | chr2_4:51501540-51501559 | Msa0333600:intron | 55.0% | |
| ! | GCACTGGTGCATTCCTTGCA+TGG | - | chr2_4:51501853-51501872 | Msa0333600:intron | 55.0% |
| TTCACTCAAGCGCCATGGGG+AGG | - | chr2_4:51501543-51501562 | Msa0333600:intron | 60.0% | |
| !! | GGAGGTTGGTACCATCCCCA+TGG | + | chr2_4:51502168-51502187 | None:intergenic | 60.0% |
| TTCACTCAAGCGCCATGGGG+AGG | - | chr2_4:51501543-51501562 | Msa0333600:intron | 60.0% | |
| !! | GGAGGTTGGTACCATCCCCA+TGG | + | chr2_4:51502168-51502187 | None:intergenic | 60.0% |
| ! | GACTGGTGGGTCTCGACCAG+AGG | - | chr2_4:51500988-51501007 | Msa0333600:CDS | 65.0% |
| ! | GACTGGTGGGTCTCGACCAG+AGG | - | chr2_4:51500988-51501007 | Msa0333600:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 51499883 | 51502209 | 51499883 | ID=Msa0333600;Name=Msa0333600 |
| chr2_4 | mRNA | 51499883 | 51502209 | 51499883 | ID=Msa0333600-mRNA-1;Parent=Msa0333600;Name=Msa0333600-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.5|0.42|0.71|0.66|0.71|7|49|223 |
| chr2_4 | exon | 51499883 | 51499977 | 51499883 | ID=Msa0333600-mRNA-1:exon:15409;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51500488 | 51500594 | 51500488 | ID=Msa0333600-mRNA-1:exon:15408;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51500680 | 51500740 | 51500680 | ID=Msa0333600-mRNA-1:exon:15407;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51500841 | 51501049 | 51500841 | ID=Msa0333600-mRNA-1:exon:15406;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51501083 | 51501160 | 51501083 | ID=Msa0333600-mRNA-1:exon:15405;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51501569 | 51501653 | 51501569 | ID=Msa0333600-mRNA-1:exon:15404;Parent=Msa0333600-mRNA-1 |
| chr2_4 | exon | 51502124 | 51502209 | 51502124 | ID=Msa0333600-mRNA-1:exon:15403;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51502124 | 51502209 | 51502124 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51501569 | 51501653 | 51501569 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51501083 | 51501160 | 51501083 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51500841 | 51501049 | 51500841 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51500680 | 51500740 | 51500680 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51500488 | 51500594 | 51500488 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | CDS | 51499932 | 51499977 | 51499932 | ID=Msa0333600-mRNA-1:cds;Parent=Msa0333600-mRNA-1 |
| chr2_4 | three_prime_UTR | 51499883 | 51499931 | 51499883 | ID=Msa0333600-mRNA-1:three_prime_utr;Parent=Msa0333600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
