AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0195630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195630 MtrunA17_Chr2g0286781 99.346 153 1 0 1 153 1 153 4.70e-111 311
Msa0195630 MtrunA17_Chr1g0191351 56.835 139 60 0 5 143 6 144 8.57e-60 182
Msa0195630 MtrunA17_Chr7g0273321 60.993 141 54 1 9 148 6 146 3.38e-59 180
Msa0195630 MtrunA17_Chr1g0196361 55.944 143 63 0 5 147 3 145 8.38e-57 174
Msa0195630 MtrunA17_Chr2g0331011 42.446 139 80 0 1 139 1 139 4.09e-39 129
Msa0195630 MtrunA17_Chr2g0331021 42.446 139 80 0 1 139 1 139 7.45e-39 129
Msa0195630 MtrunA17_Chr2g0333131 46.207 145 73 3 10 149 10 154 1.41e-31 110
Msa0195630 MtrunA17_Chr4g0003251 43.478 115 63 2 37 149 28 142 5.94e-28 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195630 AT3G21510.1 70.588 153 45 0 1 153 1 153 7.01e-71 210
Msa0195630 AT1G03430.1 52.632 152 71 1 3 153 6 157 8.12e-56 172
Msa0195630 AT5G39340.1 50.331 151 74 1 3 152 5 155 3.90e-51 160
Msa0195630 AT3G29350.1 48.026 152 78 1 3 153 5 156 4.85e-51 160
Msa0195630 AT5G39340.4 50.331 151 74 1 3 152 38 188 1.49e-50 160
Msa0195630 AT5G39340.2 50.331 151 74 1 3 152 54 204 3.35e-50 160
Msa0195630 AT5G39340.3 50.331 151 74 1 3 152 54 204 3.35e-50 160
Msa0195630 AT1G03430.2 51.852 135 64 1 3 136 6 140 1.89e-46 149
Msa0195630 AT3G16360.2 44.030 134 75 0 6 139 1 134 8.97e-39 129
Msa0195630 AT3G16360.1 45.000 120 66 0 19 138 8 127 1.07e-36 123
Msa0195630 AT3G29350.2 47.273 110 57 1 3 111 5 114 6.66e-34 115
Msa0195630 AT1G80100.1 49.275 138 68 2 14 149 17 154 2.40e-27 100
Msa0195630 AT1G80100.2 47.778 90 46 1 61 149 43 132 1.25e-21 84.7
Msa0195630 AT4G04402.1 33.750 160 94 4 6 153 8 167 1.36e-21 85.9
Msa0195630 AT1G80100.3 46.774 124 65 1 14 136 17 140 1.56e-21 85.5

Find 71 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATATTTGGCCAGATTC+TGG 0.210683 2_1:+12494948 None:intergenic
TTTCTCTCTCTTTGTGATAT+TGG 0.213849 2_1:+12496904 None:intergenic
TGCACATGTTCACCAGTTTA+AGG 0.220882 2_1:-12496026 Msa0195630:CDS
TTACTACAACTACTTCCTTT+TGG 0.278143 2_1:+12495094 None:intergenic
GATGTAAAGTCACTTTATTT+TGG 0.286027 2_1:-12494760 Msa0195630:three_prime_UTR
CTACGCCTCTTGTGAATGTT+TGG 0.304090 2_1:-12495253 Msa0195630:three_prime_UTR
TATATCAATCAGTTATTTGT+AGG 0.322431 2_1:+12496956 None:intergenic
ATGGTGAACAAAGGGTTTCT+TGG 0.350647 2_1:-12496478 Msa0195630:intron
ACTCAGTTCAGTTCCATCAT+AGG 0.355461 2_1:+12495338 None:intergenic
TAATGATATAGTCATCAAAA+TGG 0.367641 2_1:+12494857 None:intergenic
TCGCAGTTCTTTCAATTTCA+AGG 0.375946 2_1:-12496828 Msa0195630:intron
AGTTCTGGTAATCCGGAGTT+TGG 0.395859 2_1:-12494971 Msa0195630:three_prime_UTR
CGAAATTGAAGGTTGGAACT+TGG 0.397390 2_1:+12496848 None:intergenic
TCCGGAGTTTGGCCAGAATC+TGG 0.400410 2_1:-12494960 Msa0195630:three_prime_UTR
ATTAAAGTGGCATAAGCTAA+TGG 0.401007 2_1:-12494784 Msa0195630:three_prime_UTR
GCTGCTGAAGTTGGAGAAAC+TGG 0.408482 2_1:+12496451 None:intergenic
CAAAGAGGCAAGATCAATAT+TGG 0.419521 2_1:+12495126 None:intergenic
CAAACACTTGGATTCATCAT+AGG 0.423961 2_1:-12495053 Msa0195630:three_prime_UTR
TTGCACTGCTACCCTTAAAC+TGG 0.425560 2_1:+12496014 None:intergenic
GCACATGTTCACCAGTTTAA+GGG 0.428803 2_1:-12496025 Msa0195630:CDS
TTCGCGACGAAAAGAAGTTC+TGG 0.435697 2_1:-12494986 Msa0195630:three_prime_UTR
ATGATGAATCCAAGTGTTTG+AGG 0.448221 2_1:+12495056 None:intergenic
TGAAAGAACTGCGAAATTGA+AGG 0.449938 2_1:+12496837 None:intergenic
GATGCCAACTACTGACCTAT+AGG 0.450042 2_1:+12494823 None:intergenic
GAAAAGAAGTTCTGGTAATC+CGG 0.450284 2_1:-12494978 Msa0195630:three_prime_UTR
CTACATCAAATCCATGTTCA+TGG 0.459422 2_1:-12496630 Msa0195630:CDS
CTAATTTATGCAGGTGCCGC+AGG 0.459692 2_1:-12495555 Msa0195630:intron
CATCTTGTAGCTGCTGAAGT+TGG 0.465876 2_1:+12496442 None:intergenic
GCAGCTTGAGCAGCAGATAG+TGG 0.473916 2_1:-12495378 Msa0195630:intron
CTCAGTTCAGTTCCATCATA+GGG 0.476361 2_1:+12495339 None:intergenic
GGTTGGAACTTGGAAGAGAG+AGG 0.481135 2_1:+12496858 None:intergenic
ATCAATTCAAGAAAGTCTAT+AGG 0.487374 2_1:+12494897 None:intergenic
ATTACATGGCAACATCCTAT+AGG 0.492235 2_1:-12494838 Msa0195630:three_prime_UTR
GCCAGATTCTGGCCAAACTC+CGG 0.498103 2_1:+12494959 None:intergenic
CACAGTACACAGGGCTCGCG+TGG 0.505609 2_1:+12497023 None:intergenic
GGGTCAGATGCGGAGACAGT+GGG 0.506261 2_1:-12496657 Msa0195630:CDS
TTTAGCAAAAGAATCATACT+TGG 0.508350 2_1:-12494926 Msa0195630:three_prime_UTR
ATCAGTTATTTGTAGGAAGT+AGG 0.521460 2_1:+12496963 None:intergenic
TAAGCTTGAAACATTGTTGA+GGG 0.522076 2_1:-12495491 Msa0195630:intron
TGAACAAAGGGTTTCTTGGA+TGG 0.522720 2_1:-12496474 Msa0195630:intron
TGACAGCATAGGCGCACAAA+GGG 0.523421 2_1:-12495804 Msa0195630:intron
TTGATGACTATATCATTACA+TGG 0.534465 2_1:-12494852 Msa0195630:three_prime_UTR
GAGCAGCAGATAGTGGCAGC+TGG 0.537850 2_1:-12495371 Msa0195630:CDS
TCTTTGTCACTCTCCCCAAA+AGG 0.541572 2_1:-12495109 Msa0195630:three_prime_UTR
TGGTCTAACCTCCATGAACA+TGG 0.544818 2_1:+12496619 None:intergenic
TCTTGCGAACCTCAAACACT+TGG 0.556996 2_1:-12495065 Msa0195630:three_prime_UTR
TGGTGGCTCAATCCCTATGA+TGG 0.558041 2_1:-12495351 Msa0195630:CDS
TTTGTAGAGAAACATGGAGG+TGG 0.564605 2_1:-12496678 Msa0195630:intron
ACATCCTATAGGTCAGTAGT+TGG 0.565588 2_1:-12494827 Msa0195630:three_prime_UTR
TCAGTAGTTGGCATCACTTG+TGG 0.565988 2_1:-12494815 Msa0195630:three_prime_UTR
TTGTGAAGAACAAAGTACAT+TGG 0.567324 2_1:+12495204 None:intergenic
AGAACTGCGAAATTGAAGGT+TGG 0.584521 2_1:+12496841 None:intergenic
ATAAGCTTGAAACATTGTTG+AGG 0.584829 2_1:-12495492 Msa0195630:CDS
AAAATCCAAACATTCACAAG+AGG 0.592112 2_1:+12495248 None:intergenic
TGGGTCAGATGCGGAGACAG+TGG 0.592973 2_1:-12496658 Msa0195630:CDS
TCAGATGCGGAGACAGTGGG+TGG 0.608143 2_1:-12496654 Msa0195630:CDS
TTGTAGAGAAACATGGAGGT+GGG 0.611758 2_1:-12496677 Msa0195630:intron
AACAGGTCATCACAGTACAC+AGG 0.614406 2_1:+12497013 None:intergenic
AGTTTAAGGGTAGCAGTGCA+AGG 0.619461 2_1:-12496012 Msa0195630:intron
TCACTTGCTGCAAACACCTG+CGG 0.622315 2_1:+12495539 None:intergenic
TAGATTTCTATCTTAACCGT+CGG 0.622906 2_1:-12495009 Msa0195630:three_prime_UTR
GAACTGAGTCTCTAAGTGAG+TGG 0.628098 2_1:-12495324 Msa0195630:exon
CAGCAGATAGTGGCAGCTGG+TGG 0.634128 2_1:-12495368 Msa0195630:CDS
GAAATTGCGAAAAGCAACGC+AGG 0.637314 2_1:+12495772 None:intergenic
ACATGGAGGTGGGTCAGATG+CGG 0.639294 2_1:-12496667 Msa0195630:CDS
ATCTTGTTTGTAGAGAAACA+TGG 0.651196 2_1:-12496684 Msa0195630:intron
TTGACAGCATAGGCGCACAA+AGG 0.651584 2_1:-12495805 Msa0195630:intron
ACAGTACACAGGGCTCGCGT+GGG 0.658073 2_1:+12497024 None:intergenic
ACAGGTCATCACAGTACACA+GGG 0.667052 2_1:+12497014 None:intergenic
CATCAAATCCATGTTCATGG+AGG 0.716249 2_1:-12496627 Msa0195630:intron
TTGTTTGTAGAGAAACATGG+AGG 0.739091 2_1:-12496681 Msa0195630:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAGGAAAATAAATTAAT+GGG + chr2_1:12495005-12495024 None:intergenic 10.0%
!!! AATTTATATGATTTCTTTTA+TGG - chr2_1:12496373-12496392 Msa0195630:CDS 10.0%
!! TTTAAGGAAAATAAATTAAT+GGG + chr2_1:12495005-12495024 None:intergenic 10.0%
!!! AATTTATATGATTTCTTTTA+TGG - chr2_1:12496373-12496392 Msa0195630:CDS 10.0%
!!! CTTTAAGGAAAATAAATTAA+TGG + chr2_1:12495006-12495025 None:intergenic 15.0%
!! ATTAGAGAATATAATGAATT+TGG - chr2_1:12495502-12495521 Msa0195630:CDS 15.0%
!! AAATCCATAAGTTTAATATA+AGG + chr2_1:12496351-12496370 None:intergenic 15.0%
!!! CTTTAAGGAAAATAAATTAA+TGG + chr2_1:12495006-12495025 None:intergenic 15.0%
!! ATTAGAGAATATAATGAATT+TGG - chr2_1:12495502-12495521 Msa0195630:CDS 15.0%
!! AAATCCATAAGTTTAATATA+AGG + chr2_1:12496351-12496370 None:intergenic 15.0%
!! TATATCAATCAGTTATTTGT+AGG + chr2_1:12494830-12494849 None:intergenic 20.0%
!!! TTTTGCTTTTGTTTTTGTTT+AGG - chr2_1:12495227-12495246 Msa0195630:three_prime_UTR 20.0%
!!! TTTTCAATTGTTGATTTTGT+TGG - chr2_1:12495260-12495279 Msa0195630:three_prime_UTR 20.0%
!!! TTGTTTTTCTGTTTTGTTTA+TGG - chr2_1:12495286-12495305 Msa0195630:three_prime_UTR 20.0%
!! AATAAAGTATAACCAAGAAT+TGG + chr2_1:12495599-12495618 None:intergenic 20.0%
!! AACAAGTGAAAAAACATAAA+TGG + chr2_1:12495905-12495924 None:intergenic 20.0%
!! AGAACCTTATATTAAACTTA+TGG - chr2_1:12496344-12496363 Msa0195630:intron 20.0%
!!! TATTTTGCATGTTTTAATGA+AGG - chr2_1:12496625-12496644 Msa0195630:intron 20.0%
!!! TCTTTTGCTAAAACAATATT+TGG + chr2_1:12496849-12496868 None:intergenic 20.0%
!! TAATGATATAGTCATCAAAA+TGG + chr2_1:12496929-12496948 None:intergenic 20.0%
!! TATATCAATCAGTTATTTGT+AGG + chr2_1:12494830-12494849 None:intergenic 20.0%
!!! TTTTGCTTTTGTTTTTGTTT+AGG - chr2_1:12495227-12495246 Msa0195630:three_prime_UTR 20.0%
!!! TTTTCAATTGTTGATTTTGT+TGG - chr2_1:12495260-12495279 Msa0195630:three_prime_UTR 20.0%
!!! TTGTTTTTCTGTTTTGTTTA+TGG - chr2_1:12495286-12495305 Msa0195630:three_prime_UTR 20.0%
!! AATAAAGTATAACCAAGAAT+TGG + chr2_1:12495599-12495618 None:intergenic 20.0%
!! AACAAGTGAAAAAACATAAA+TGG + chr2_1:12495905-12495924 None:intergenic 20.0%
!! AGAACCTTATATTAAACTTA+TGG - chr2_1:12496344-12496363 Msa0195630:intron 20.0%
!!! TATTTTGCATGTTTTAATGA+AGG - chr2_1:12496625-12496644 Msa0195630:intron 20.0%
!!! TCTTTTGCTAAAACAATATT+TGG + chr2_1:12496849-12496868 None:intergenic 20.0%
!! TAATGATATAGTCATCAAAA+TGG + chr2_1:12496929-12496948 None:intergenic 20.0%
!!! TCATCAAGTTTTGATCTTTA+AGG + chr2_1:12495021-12495040 None:intergenic 25.0%
!!! TTTTGTTTATGGTGAACAAA+GGG - chr2_1:12495297-12495316 Msa0195630:three_prime_UTR 25.0%
! ACAACTTCAAAAACAAATTC+AGG + chr2_1:12495375-12495394 None:intergenic 25.0%
! AACATGAGAGAAATGAAAAA+AGG + chr2_1:12495478-12495497 None:intergenic 25.0%
!! AGCATTTATACATTTAAGGT+TGG + chr2_1:12495815-12495834 None:intergenic 25.0%
! CTGTAGCATTTATACATTTA+AGG + chr2_1:12495819-12495838 None:intergenic 25.0%
!! ACCATGCTACTATATATTTT+TGG - chr2_1:12495928-12495947 Msa0195630:intron 25.0%
! ACCAAAAATATATAGTAGCA+TGG + chr2_1:12495932-12495951 None:intergenic 25.0%
!!! GACTAGTTGTTTAATAGTTT+TGG - chr2_1:12496075-12496094 Msa0195630:intron 25.0%
!! TGAATTTTTCGCTAATTTCA+TGG - chr2_1:12496187-12496206 Msa0195630:intron 25.0%
! GTGAAATTTCTAATTTATGC+AGG - chr2_1:12496219-12496238 Msa0195630:intron 25.0%
!! TGAATGTTTGGATTTTTATG+TGG - chr2_1:12496542-12496561 Msa0195630:intron 25.0%
! TTTAGCAAAAGAATCATACT+TGG - chr2_1:12496857-12496876 Msa0195630:five_prime_UTR 25.0%
! ATCAATTCAAGAAAGTCTAT+AGG + chr2_1:12496889-12496908 None:intergenic 25.0%
!! TTGATGACTATATCATTACA+TGG - chr2_1:12496931-12496950 Msa0195630:five_prime_UTR 25.0%
! TGTGGTTGAAAAAATTAAAG+TGG - chr2_1:12496986-12497005 Msa0195630:five_prime_UTR 25.0%
!!! GATGTAAAGTCACTTTATTT+TGG - chr2_1:12497023-12497042 Msa0195630:five_prime_UTR 25.0%
!!! TCATCAAGTTTTGATCTTTA+AGG + chr2_1:12495021-12495040 None:intergenic 25.0%
!!! TTTTGTTTATGGTGAACAAA+GGG - chr2_1:12495297-12495316 Msa0195630:three_prime_UTR 25.0%
! ACAACTTCAAAAACAAATTC+AGG + chr2_1:12495375-12495394 None:intergenic 25.0%
! AACATGAGAGAAATGAAAAA+AGG + chr2_1:12495478-12495497 None:intergenic 25.0%
!! AGCATTTATACATTTAAGGT+TGG + chr2_1:12495815-12495834 None:intergenic 25.0%
! CTGTAGCATTTATACATTTA+AGG + chr2_1:12495819-12495838 None:intergenic 25.0%
!! ACCATGCTACTATATATTTT+TGG - chr2_1:12495928-12495947 Msa0195630:intron 25.0%
! ACCAAAAATATATAGTAGCA+TGG + chr2_1:12495932-12495951 None:intergenic 25.0%
!!! GACTAGTTGTTTAATAGTTT+TGG - chr2_1:12496075-12496094 Msa0195630:intron 25.0%
!! TGAATTTTTCGCTAATTTCA+TGG - chr2_1:12496187-12496206 Msa0195630:intron 25.0%
! GTGAAATTTCTAATTTATGC+AGG - chr2_1:12496219-12496238 Msa0195630:intron 25.0%
!! TGAATGTTTGGATTTTTATG+TGG - chr2_1:12496542-12496561 Msa0195630:intron 25.0%
! TTTAGCAAAAGAATCATACT+TGG - chr2_1:12496857-12496876 Msa0195630:five_prime_UTR 25.0%
! ATCAATTCAAGAAAGTCTAT+AGG + chr2_1:12496889-12496908 None:intergenic 25.0%
!! TTGATGACTATATCATTACA+TGG - chr2_1:12496931-12496950 Msa0195630:five_prime_UTR 25.0%
! TGTGGTTGAAAAAATTAAAG+TGG - chr2_1:12496986-12497005 Msa0195630:five_prime_UTR 25.0%
!!! GATGTAAAGTCACTTTATTT+TGG - chr2_1:12497023-12497042 Msa0195630:five_prime_UTR 25.0%
ATCAGTTATTTGTAGGAAGT+AGG + chr2_1:12494823-12494842 None:intergenic 30.0%
TTTCTCTCTCTTTGTGATAT+TGG + chr2_1:12494882-12494901 None:intergenic 30.0%
! ATCTTGTTTGTAGAGAAACA+TGG - chr2_1:12495099-12495118 Msa0195630:three_prime_UTR 30.0%
! GTCAATTAATGTGTGTTTTG+TGG + chr2_1:12495187-12495206 None:intergenic 30.0%
! ACACATTAATTGACTCTTCT+GGG - chr2_1:12495193-12495212 Msa0195630:three_prime_UTR 30.0%
!!! GTTTTGTTTATGGTGAACAA+AGG - chr2_1:12495296-12495315 Msa0195630:three_prime_UTR 30.0%
!! TTTTCTTTGATGATTCTGAG+AGG - chr2_1:12495400-12495419 Msa0195630:intron 30.0%
AAGTATAACCAAGAATTGGT+TGG + chr2_1:12495595-12495614 None:intergenic 30.0%
AGACATGATCTAATGTTGTT+GGG - chr2_1:12495686-12495705 Msa0195630:intron 30.0%
GCTACAGAATCTGAATAAAT+CGG - chr2_1:12495832-12495851 Msa0195630:intron 30.0%
ATAAGCTTGAAACATTGTTG+AGG - chr2_1:12496291-12496310 Msa0195630:intron 30.0%
TAAGCTTGAAACATTGTTGA+GGG - chr2_1:12496292-12496311 Msa0195630:intron 30.0%
AAAATCCAAACATTCACAAG+AGG + chr2_1:12496538-12496557 None:intergenic 30.0%
TTGTGAAGAACAAAGTACAT+TGG + chr2_1:12496582-12496601 None:intergenic 30.0%
! TACTACAACTACTTCCTTTT+GGG + chr2_1:12496691-12496710 None:intergenic 30.0%
! TTACTACAACTACTTCCTTT+TGG + chr2_1:12496692-12496711 None:intergenic 30.0%
TAGATTTCTATCTTAACCGT+CGG - chr2_1:12496774-12496793 Msa0195630:intron 30.0%
ATTAAAGTGGCATAAGCTAA+TGG - chr2_1:12496999-12497018 Msa0195630:five_prime_UTR 30.0%
ATCAGTTATTTGTAGGAAGT+AGG + chr2_1:12494823-12494842 None:intergenic 30.0%
TTTCTCTCTCTTTGTGATAT+TGG + chr2_1:12494882-12494901 None:intergenic 30.0%
! ATCTTGTTTGTAGAGAAACA+TGG - chr2_1:12495099-12495118 Msa0195630:three_prime_UTR 30.0%
! GTCAATTAATGTGTGTTTTG+TGG + chr2_1:12495187-12495206 None:intergenic 30.0%
! ACACATTAATTGACTCTTCT+GGG - chr2_1:12495193-12495212 Msa0195630:three_prime_UTR 30.0%
!!! GTTTTGTTTATGGTGAACAA+AGG - chr2_1:12495296-12495315 Msa0195630:three_prime_UTR 30.0%
!! TTTTCTTTGATGATTCTGAG+AGG - chr2_1:12495400-12495419 Msa0195630:intron 30.0%
AAGTATAACCAAGAATTGGT+TGG + chr2_1:12495595-12495614 None:intergenic 30.0%
AGACATGATCTAATGTTGTT+GGG - chr2_1:12495686-12495705 Msa0195630:intron 30.0%
GCTACAGAATCTGAATAAAT+CGG - chr2_1:12495832-12495851 Msa0195630:intron 30.0%
ATAAGCTTGAAACATTGTTG+AGG - chr2_1:12496291-12496310 Msa0195630:intron 30.0%
TAAGCTTGAAACATTGTTGA+GGG - chr2_1:12496292-12496311 Msa0195630:intron 30.0%
AAAATCCAAACATTCACAAG+AGG + chr2_1:12496538-12496557 None:intergenic 30.0%
TTGTGAAGAACAAAGTACAT+TGG + chr2_1:12496582-12496601 None:intergenic 30.0%
! TACTACAACTACTTCCTTTT+GGG + chr2_1:12496691-12496710 None:intergenic 30.0%
! TTACTACAACTACTTCCTTT+TGG + chr2_1:12496692-12496711 None:intergenic 30.0%
TAGATTTCTATCTTAACCGT+CGG - chr2_1:12496774-12496793 Msa0195630:intron 30.0%
ATTAAAGTGGCATAAGCTAA+TGG - chr2_1:12496999-12497018 Msa0195630:five_prime_UTR 30.0%
TGAAAGAACTGCGAAATTGA+AGG + chr2_1:12494949-12494968 None:intergenic 35.0%
TCGCAGTTCTTTCAATTTCA+AGG - chr2_1:12494955-12494974 Msa0195630:three_prime_UTR 35.0%
TTGTTTGTAGAGAAACATGG+AGG - chr2_1:12495102-12495121 Msa0195630:three_prime_UTR 35.0%
CTACATCAAATCCATGTTCA+TGG - chr2_1:12495153-12495172 Msa0195630:three_prime_UTR 35.0%
! CACACATTAATTGACTCTTC+TGG - chr2_1:12495192-12495211 Msa0195630:three_prime_UTR 35.0%
TCTCCTGAATGATTCATTCT+AGG + chr2_1:12495557-12495576 None:intergenic 35.0%
GAGACATGATCTAATGTTGT+TGG - chr2_1:12495685-12495704 Msa0195630:intron 35.0%
GACATGATCTAATGTTGTTG+GGG - chr2_1:12495687-12495706 Msa0195630:intron 35.0%
GTATGTTTGATTGACAGCAT+AGG - chr2_1:12495968-12495987 Msa0195630:intron 35.0%
CAAAGAGGCAAGATCAATAT+TGG + chr2_1:12496660-12496679 None:intergenic 35.0%
! ACTACAACTACTTCCTTTTG+GGG + chr2_1:12496690-12496709 None:intergenic 35.0%
ATGATGAATCCAAGTGTTTG+AGG + chr2_1:12496730-12496749 None:intergenic 35.0%
CAAACACTTGGATTCATCAT+AGG - chr2_1:12496730-12496749 Msa0195630:intron 35.0%
! GAAAAGAAGTTCTGGTAATC+CGG - chr2_1:12496805-12496824 Msa0195630:intron 35.0%
AACAATATTTGGCCAGATTC+TGG + chr2_1:12496838-12496857 None:intergenic 35.0%
ATTACATGGCAACATCCTAT+AGG - chr2_1:12496945-12496964 Msa0195630:five_prime_UTR 35.0%
TGAAAGAACTGCGAAATTGA+AGG + chr2_1:12494949-12494968 None:intergenic 35.0%
TCGCAGTTCTTTCAATTTCA+AGG - chr2_1:12494955-12494974 Msa0195630:three_prime_UTR 35.0%
TTGTTTGTAGAGAAACATGG+AGG - chr2_1:12495102-12495121 Msa0195630:three_prime_UTR 35.0%
CTACATCAAATCCATGTTCA+TGG - chr2_1:12495153-12495172 Msa0195630:three_prime_UTR 35.0%
! CACACATTAATTGACTCTTC+TGG - chr2_1:12495192-12495211 Msa0195630:three_prime_UTR 35.0%
TCTCCTGAATGATTCATTCT+AGG + chr2_1:12495557-12495576 None:intergenic 35.0%
GAGACATGATCTAATGTTGT+TGG - chr2_1:12495685-12495704 Msa0195630:intron 35.0%
GACATGATCTAATGTTGTTG+GGG - chr2_1:12495687-12495706 Msa0195630:intron 35.0%
GTATGTTTGATTGACAGCAT+AGG - chr2_1:12495968-12495987 Msa0195630:intron 35.0%
CAAAGAGGCAAGATCAATAT+TGG + chr2_1:12496660-12496679 None:intergenic 35.0%
! ACTACAACTACTTCCTTTTG+GGG + chr2_1:12496690-12496709 None:intergenic 35.0%
ATGATGAATCCAAGTGTTTG+AGG + chr2_1:12496730-12496749 None:intergenic 35.0%
CAAACACTTGGATTCATCAT+AGG - chr2_1:12496730-12496749 Msa0195630:intron 35.0%
! GAAAAGAAGTTCTGGTAATC+CGG - chr2_1:12496805-12496824 Msa0195630:intron 35.0%
AACAATATTTGGCCAGATTC+TGG + chr2_1:12496838-12496857 None:intergenic 35.0%
ATTACATGGCAACATCCTAT+AGG - chr2_1:12496945-12496964 Msa0195630:five_prime_UTR 35.0%
!! TTGTTTTGCGCACTACAAAC+AGG + chr2_1:12494790-12494809 None:intergenic 40.0%
CGAAATTGAAGGTTGGAACT+TGG + chr2_1:12494938-12494957 None:intergenic 40.0%
AGAACTGCGAAATTGAAGGT+TGG + chr2_1:12494945-12494964 None:intergenic 40.0%
GGGTCAATGAAAAGAGAGAA+GGG + chr2_1:12494985-12495004 None:intergenic 40.0%
TGGGTCAATGAAAAGAGAGA+AGG + chr2_1:12494986-12495005 None:intergenic 40.0%
! TTGATGACCCTAACTCAACT+GGG - chr2_1:12495034-12495053 Msa0195630:three_prime_UTR 40.0%
TTTGTAGAGAAACATGGAGG+TGG - chr2_1:12495105-12495124 Msa0195630:three_prime_UTR 40.0%
TTGTAGAGAAACATGGAGGT+GGG - chr2_1:12495106-12495125 Msa0195630:three_prime_UTR 40.0%
CATCAAATCCATGTTCATGG+AGG - chr2_1:12495156-12495175 Msa0195630:three_prime_UTR 40.0%
ATGGTGAACAAAGGGTTTCT+TGG - chr2_1:12495305-12495324 Msa0195630:three_prime_UTR 40.0%
TGAACAAAGGGTTTCTTGGA+TGG - chr2_1:12495309-12495328 Msa0195630:three_prime_UTR 40.0%
CCTGAATGATTCATTCTAGG+TGG + chr2_1:12495554-12495573 None:intergenic 40.0%
CCACCTAGAATGAATCATTC+AGG - chr2_1:12495551-12495570 Msa0195630:intron 40.0%
!! CTCTCTTGCTATTAATCACC+CGG + chr2_1:12495666-12495685 None:intergenic 40.0%
TGCACATGTTCACCAGTTTA+AGG - chr2_1:12495757-12495776 Msa0195630:CDS 40.0%
GCACATGTTCACCAGTTTAA+GGG - chr2_1:12495758-12495777 Msa0195630:CDS 40.0%
CAGCTAGTGCAATAGTTTGA+AGG - chr2_1:12496114-12496133 Msa0195630:intron 40.0%
CTTTACTGCTTAGATGCTAG+AGG - chr2_1:12496156-12496175 Msa0195630:intron 40.0%
CTCAGTTCAGTTCCATCATA+GGG + chr2_1:12496447-12496466 None:intergenic 40.0%
ACTCAGTTCAGTTCCATCAT+AGG + chr2_1:12496448-12496467 None:intergenic 40.0%
ACATCCTATAGGTCAGTAGT+TGG - chr2_1:12496956-12496975 Msa0195630:five_prime_UTR 40.0%
!! TTGTTTTGCGCACTACAAAC+AGG + chr2_1:12494790-12494809 None:intergenic 40.0%
CGAAATTGAAGGTTGGAACT+TGG + chr2_1:12494938-12494957 None:intergenic 40.0%
AGAACTGCGAAATTGAAGGT+TGG + chr2_1:12494945-12494964 None:intergenic 40.0%
GGGTCAATGAAAAGAGAGAA+GGG + chr2_1:12494985-12495004 None:intergenic 40.0%
TGGGTCAATGAAAAGAGAGA+AGG + chr2_1:12494986-12495005 None:intergenic 40.0%
! TTGATGACCCTAACTCAACT+GGG - chr2_1:12495034-12495053 Msa0195630:three_prime_UTR 40.0%
TTTGTAGAGAAACATGGAGG+TGG - chr2_1:12495105-12495124 Msa0195630:three_prime_UTR 40.0%
TTGTAGAGAAACATGGAGGT+GGG - chr2_1:12495106-12495125 Msa0195630:three_prime_UTR 40.0%
CATCAAATCCATGTTCATGG+AGG - chr2_1:12495156-12495175 Msa0195630:three_prime_UTR 40.0%
ATGGTGAACAAAGGGTTTCT+TGG - chr2_1:12495305-12495324 Msa0195630:three_prime_UTR 40.0%
TGAACAAAGGGTTTCTTGGA+TGG - chr2_1:12495309-12495328 Msa0195630:three_prime_UTR 40.0%
CCTGAATGATTCATTCTAGG+TGG + chr2_1:12495554-12495573 None:intergenic 40.0%
CCACCTAGAATGAATCATTC+AGG - chr2_1:12495551-12495570 Msa0195630:intron 40.0%
!! CTCTCTTGCTATTAATCACC+CGG + chr2_1:12495666-12495685 None:intergenic 40.0%
TGCACATGTTCACCAGTTTA+AGG - chr2_1:12495757-12495776 Msa0195630:CDS 40.0%
GCACATGTTCACCAGTTTAA+GGG - chr2_1:12495758-12495777 Msa0195630:CDS 40.0%
CAGCTAGTGCAATAGTTTGA+AGG - chr2_1:12496114-12496133 Msa0195630:intron 40.0%
CTTTACTGCTTAGATGCTAG+AGG - chr2_1:12496156-12496175 Msa0195630:intron 40.0%
CTCAGTTCAGTTCCATCATA+GGG + chr2_1:12496447-12496466 None:intergenic 40.0%
ACTCAGTTCAGTTCCATCAT+AGG + chr2_1:12496448-12496467 None:intergenic 40.0%
ACATCCTATAGGTCAGTAGT+TGG - chr2_1:12496956-12496975 Msa0195630:five_prime_UTR 40.0%
ACAGGTCATCACAGTACACA+GGG + chr2_1:12494772-12494791 None:intergenic 45.0%
AACAGGTCATCACAGTACAC+AGG + chr2_1:12494773-12494792 None:intergenic 45.0%
! CTTGATGACCCTAACTCAAC+TGG - chr2_1:12495033-12495052 Msa0195630:three_prime_UTR 45.0%
TGAGTGACCCAGTTGAGTTA+GGG + chr2_1:12495044-12495063 None:intergenic 45.0%
TGGTCTAACCTCCATGAACA+TGG + chr2_1:12495167-12495186 None:intergenic 45.0%
CATCTTGTAGCTGCTGAAGT+TGG + chr2_1:12495344-12495363 None:intergenic 45.0%
ATCATTCAGGAGAACCCTCT+TGG - chr2_1:12495564-12495583 Msa0195630:intron 45.0%
TCATTCAGGAGAACCCTCTT+GGG - chr2_1:12495565-12495584 Msa0195630:intron 45.0%
TTTACCTCTCGAGCGAACTT+CGG - chr2_1:12495617-12495636 Msa0195630:intron 45.0%
CTATTAATCACCCGGTTCTG+GGG + chr2_1:12495658-12495677 None:intergenic 45.0%
GCTATTAATCACCCGGTTCT+GGG + chr2_1:12495659-12495678 None:intergenic 45.0%
TGCTATTAATCACCCGGTTC+TGG + chr2_1:12495660-12495679 None:intergenic 45.0%
! TGTTGGGGTTTTACATGTGC+AGG - chr2_1:12495702-12495721 Msa0195630:intron 45.0%
! GTTGGGGTTTTACATGTGCA+GGG - chr2_1:12495703-12495722 Msa0195630:intron 45.0%
TTGCACTGCTACCCTTAAAC+TGG + chr2_1:12495772-12495791 None:intergenic 45.0%
AGTTTAAGGGTAGCAGTGCA+AGG - chr2_1:12495771-12495790 Msa0195630:CDS 45.0%
GAAATTGCGAAAAGCAACGC+AGG + chr2_1:12496014-12496033 None:intergenic 45.0%
GAACTGAGTCTCTAAGTGAG+TGG - chr2_1:12496459-12496478 Msa0195630:CDS 45.0%
CTACGCCTCTTGTGAATGTT+TGG - chr2_1:12496530-12496549 Msa0195630:intron 45.0%
!! TTTTGGGGAGAGTGACAAAG+AGG + chr2_1:12496675-12496694 None:intergenic 45.0%
TCTTTGTCACTCTCCCCAAA+AGG - chr2_1:12496674-12496693 Msa0195630:exon 45.0%
TCTTGCGAACCTCAAACACT+TGG - chr2_1:12496718-12496737 Msa0195630:intron 45.0%
TTCGCGACGAAAAGAAGTTC+TGG - chr2_1:12496797-12496816 Msa0195630:intron 45.0%
! AGTTCTGGTAATCCGGAGTT+TGG - chr2_1:12496812-12496831 Msa0195630:intron 45.0%
GATGCCAACTACTGACCTAT+AGG + chr2_1:12496963-12496982 None:intergenic 45.0%
TCAGTAGTTGGCATCACTTG+TGG - chr2_1:12496968-12496987 Msa0195630:five_prime_UTR 45.0%
ACAGGTCATCACAGTACACA+GGG + chr2_1:12494772-12494791 None:intergenic 45.0%
AACAGGTCATCACAGTACAC+AGG + chr2_1:12494773-12494792 None:intergenic 45.0%
! CTTGATGACCCTAACTCAAC+TGG - chr2_1:12495033-12495052 Msa0195630:three_prime_UTR 45.0%
TGAGTGACCCAGTTGAGTTA+GGG + chr2_1:12495044-12495063 None:intergenic 45.0%
TGGTCTAACCTCCATGAACA+TGG + chr2_1:12495167-12495186 None:intergenic 45.0%
CATCTTGTAGCTGCTGAAGT+TGG + chr2_1:12495344-12495363 None:intergenic 45.0%
ATCATTCAGGAGAACCCTCT+TGG - chr2_1:12495564-12495583 Msa0195630:intron 45.0%
TCATTCAGGAGAACCCTCTT+GGG - chr2_1:12495565-12495584 Msa0195630:intron 45.0%
TTTACCTCTCGAGCGAACTT+CGG - chr2_1:12495617-12495636 Msa0195630:intron 45.0%
CTATTAATCACCCGGTTCTG+GGG + chr2_1:12495658-12495677 None:intergenic 45.0%
GCTATTAATCACCCGGTTCT+GGG + chr2_1:12495659-12495678 None:intergenic 45.0%
TGCTATTAATCACCCGGTTC+TGG + chr2_1:12495660-12495679 None:intergenic 45.0%
! TGTTGGGGTTTTACATGTGC+AGG - chr2_1:12495702-12495721 Msa0195630:intron 45.0%
! GTTGGGGTTTTACATGTGCA+GGG - chr2_1:12495703-12495722 Msa0195630:intron 45.0%
TTGCACTGCTACCCTTAAAC+TGG + chr2_1:12495772-12495791 None:intergenic 45.0%
AGTTTAAGGGTAGCAGTGCA+AGG - chr2_1:12495771-12495790 Msa0195630:CDS 45.0%
GAAATTGCGAAAAGCAACGC+AGG + chr2_1:12496014-12496033 None:intergenic 45.0%
GAACTGAGTCTCTAAGTGAG+TGG - chr2_1:12496459-12496478 Msa0195630:CDS 45.0%
CTACGCCTCTTGTGAATGTT+TGG - chr2_1:12496530-12496549 Msa0195630:intron 45.0%
!! TTTTGGGGAGAGTGACAAAG+AGG + chr2_1:12496675-12496694 None:intergenic 45.0%
TCTTTGTCACTCTCCCCAAA+AGG - chr2_1:12496674-12496693 Msa0195630:exon 45.0%
TCTTGCGAACCTCAAACACT+TGG - chr2_1:12496718-12496737 Msa0195630:intron 45.0%
TTCGCGACGAAAAGAAGTTC+TGG - chr2_1:12496797-12496816 Msa0195630:intron 45.0%
! AGTTCTGGTAATCCGGAGTT+TGG - chr2_1:12496812-12496831 Msa0195630:intron 45.0%
GATGCCAACTACTGACCTAT+AGG + chr2_1:12496963-12496982 None:intergenic 45.0%
TCAGTAGTTGGCATCACTTG+TGG - chr2_1:12496968-12496987 Msa0195630:five_prime_UTR 45.0%
GGTTGGAACTTGGAAGAGAG+AGG + chr2_1:12494928-12494947 None:intergenic 50.0%
GTGAGTGACCCAGTTGAGTT+AGG + chr2_1:12495045-12495064 None:intergenic 50.0%
GCTGCTGAAGTTGGAGAAAC+TGG + chr2_1:12495335-12495354 None:intergenic 50.0%
! ATTGGTTGGTCCACCCAAGA+GGG + chr2_1:12495581-12495600 None:intergenic 50.0%
! AATTGGTTGGTCCACCCAAG+AGG + chr2_1:12495582-12495601 None:intergenic 50.0%
TGGGTGGACCAACCAATTCT+TGG - chr2_1:12495584-12495603 Msa0195630:intron 50.0%
TAATCCGAAGTTCGCTCGAG+AGG + chr2_1:12495624-12495643 None:intergenic 50.0%
TTGACAGCATAGGCGCACAA+AGG - chr2_1:12495978-12495997 Msa0195630:intron 50.0%
TGACAGCATAGGCGCACAAA+GGG - chr2_1:12495979-12495998 Msa0195630:intron 50.0%
! CTAATTTATGCAGGTGCCGC+AGG - chr2_1:12496228-12496247 Msa0195630:intron 50.0%
! TCACTTGCTGCAAACACCTG+CGG + chr2_1:12496247-12496266 None:intergenic 50.0%
TGGTGGCTCAATCCCTATGA+TGG - chr2_1:12496432-12496451 Msa0195630:CDS 50.0%
! TTCTTTTCGTCGCGAACCGA+CGG + chr2_1:12496793-12496812 None:intergenic 50.0%
GGTTGGAACTTGGAAGAGAG+AGG + chr2_1:12494928-12494947 None:intergenic 50.0%
GTGAGTGACCCAGTTGAGTT+AGG + chr2_1:12495045-12495064 None:intergenic 50.0%
GCTGCTGAAGTTGGAGAAAC+TGG + chr2_1:12495335-12495354 None:intergenic 50.0%
! ATTGGTTGGTCCACCCAAGA+GGG + chr2_1:12495581-12495600 None:intergenic 50.0%
! AATTGGTTGGTCCACCCAAG+AGG + chr2_1:12495582-12495601 None:intergenic 50.0%
TGGGTGGACCAACCAATTCT+TGG - chr2_1:12495584-12495603 Msa0195630:intron 50.0%
TAATCCGAAGTTCGCTCGAG+AGG + chr2_1:12495624-12495643 None:intergenic 50.0%
TTGACAGCATAGGCGCACAA+AGG - chr2_1:12495978-12495997 Msa0195630:intron 50.0%
TGACAGCATAGGCGCACAAA+GGG - chr2_1:12495979-12495998 Msa0195630:intron 50.0%
! CTAATTTATGCAGGTGCCGC+AGG - chr2_1:12496228-12496247 Msa0195630:intron 50.0%
! TCACTTGCTGCAAACACCTG+CGG + chr2_1:12496247-12496266 None:intergenic 50.0%
TGGTGGCTCAATCCCTATGA+TGG - chr2_1:12496432-12496451 Msa0195630:CDS 50.0%
! TTCTTTTCGTCGCGAACCGA+CGG + chr2_1:12496793-12496812 None:intergenic 50.0%
ACATGGAGGTGGGTCAGATG+CGG - chr2_1:12495116-12495135 Msa0195630:three_prime_UTR 55.0%
TTCAGGAGAACCCTCTTGGG+TGG - chr2_1:12495568-12495587 Msa0195630:intron 55.0%
CGAGCGAACTTCGGATTACC+AGG - chr2_1:12495626-12495645 Msa0195630:intron 55.0%
!! AATCACCCGGTTCTGGGGAA+GGG + chr2_1:12495653-12495672 None:intergenic 55.0%
!! TAATCACCCGGTTCTGGGGA+AGG + chr2_1:12495654-12495673 None:intergenic 55.0%
GCAGCTTGAGCAGCAGATAG+TGG - chr2_1:12496405-12496424 Msa0195630:CDS 55.0%
TCCGGAGTTTGGCCAGAATC+TGG - chr2_1:12496823-12496842 Msa0195630:intron 55.0%
GCCAGATTCTGGCCAAACTC+CGG + chr2_1:12496827-12496846 None:intergenic 55.0%
ACATGGAGGTGGGTCAGATG+CGG - chr2_1:12495116-12495135 Msa0195630:three_prime_UTR 55.0%
TTCAGGAGAACCCTCTTGGG+TGG - chr2_1:12495568-12495587 Msa0195630:intron 55.0%
CGAGCGAACTTCGGATTACC+AGG - chr2_1:12495626-12495645 Msa0195630:intron 55.0%
!! AATCACCCGGTTCTGGGGAA+GGG + chr2_1:12495653-12495672 None:intergenic 55.0%
!! TAATCACCCGGTTCTGGGGA+AGG + chr2_1:12495654-12495673 None:intergenic 55.0%
GCAGCTTGAGCAGCAGATAG+TGG - chr2_1:12496405-12496424 Msa0195630:CDS 55.0%
TCCGGAGTTTGGCCAGAATC+TGG - chr2_1:12496823-12496842 Msa0195630:intron 55.0%
GCCAGATTCTGGCCAAACTC+CGG + chr2_1:12496827-12496846 None:intergenic 55.0%
ACAGTACACAGGGCTCGCGT+GGG + chr2_1:12494762-12494781 None:intergenic 60.0%
TGGGTCAGATGCGGAGACAG+TGG - chr2_1:12495125-12495144 Msa0195630:three_prime_UTR 60.0%
GGGTCAGATGCGGAGACAGT+GGG - chr2_1:12495126-12495145 Msa0195630:three_prime_UTR 60.0%
TCAGATGCGGAGACAGTGGG+TGG - chr2_1:12495129-12495148 Msa0195630:three_prime_UTR 60.0%
!! ATCACCCGGTTCTGGGGAAG+GGG + chr2_1:12495652-12495671 None:intergenic 60.0%
! GAGCAGCAGATAGTGGCAGC+TGG - chr2_1:12496412-12496431 Msa0195630:CDS 60.0%
! CAGCAGATAGTGGCAGCTGG+TGG - chr2_1:12496415-12496434 Msa0195630:CDS 60.0%
ACAGTACACAGGGCTCGCGT+GGG + chr2_1:12494762-12494781 None:intergenic 60.0%
TGGGTCAGATGCGGAGACAG+TGG - chr2_1:12495125-12495144 Msa0195630:three_prime_UTR 60.0%
GGGTCAGATGCGGAGACAGT+GGG - chr2_1:12495126-12495145 Msa0195630:three_prime_UTR 60.0%
TCAGATGCGGAGACAGTGGG+TGG - chr2_1:12495129-12495148 Msa0195630:three_prime_UTR 60.0%
!! ATCACCCGGTTCTGGGGAAG+GGG + chr2_1:12495652-12495671 None:intergenic 60.0%
! GAGCAGCAGATAGTGGCAGC+TGG - chr2_1:12496412-12496431 Msa0195630:CDS 60.0%
! CAGCAGATAGTGGCAGCTGG+TGG - chr2_1:12496415-12496434 Msa0195630:CDS 60.0%
CACAGTACACAGGGCTCGCG+TGG + chr2_1:12494763-12494782 None:intergenic 65.0%
CACAGTACACAGGGCTCGCG+TGG + chr2_1:12494763-12494782 None:intergenic 65.0%
CCAGGCCCCTTCCCCAGAAC+CGG - chr2_1:12495644-12495663 Msa0195630:intron 70.0%
CAGGCCCCTTCCCCAGAACC+GGG - chr2_1:12495645-12495664 Msa0195630:intron 70.0%
CCAGGCCCCTTCCCCAGAAC+CGG - chr2_1:12495644-12495663 Msa0195630:intron 70.0%
CAGGCCCCTTCCCCAGAACC+GGG - chr2_1:12495645-12495664 Msa0195630:intron 70.0%
!! CCGGTTCTGGGGAAGGGGCC+TGG + chr2_1:12495647-12495666 None:intergenic 75.0%
!! CCGGTTCTGGGGAAGGGGCC+TGG + chr2_1:12495647-12495666 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 12494759 12497046 12494759 ID=Msa0195630;Name=Msa0195630
chr2_1 mRNA 12494759 12497046 12494759 ID=Msa0195630-mRNA-1;Parent=Msa0195630;Name=Msa0195630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=224|1|1|1|0.83|0.71|7|581|153
chr2_1 exon 12494759 12495396 12494759 ID=Msa0195630-mRNA-1:exon:5471;Parent=Msa0195630-mRNA-1
chr2_1 exon 12495492 12495564 12495492 ID=Msa0195630-mRNA-1:exon:5470;Parent=Msa0195630-mRNA-1
chr2_1 exon 12495749 12495820 12495749 ID=Msa0195630-mRNA-1:exon:5469;Parent=Msa0195630-mRNA-1
chr2_1 exon 12496013 12496081 12496013 ID=Msa0195630-mRNA-1:exon:5468;Parent=Msa0195630-mRNA-1
chr2_1 exon 12496357 12496487 12496357 ID=Msa0195630-mRNA-1:exon:5467;Parent=Msa0195630-mRNA-1
chr2_1 exon 12496628 12496693 12496628 ID=Msa0195630-mRNA-1:exon:5466;Parent=Msa0195630-mRNA-1
chr2_1 exon 12496829 12497046 12496829 ID=Msa0195630-mRNA-1:exon:5465;Parent=Msa0195630-mRNA-1
chr2_1 five_prime_UTR 12496829 12497046 12496829 ID=Msa0195630-mRNA-1:five_prime_utr;Parent=Msa0195630-mRNA-1
chr2_1 five_prime_UTR 12496688 12496693 12496688 ID=Msa0195630-mRNA-1:five_prime_utr;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12496628 12496687 12496628 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12496357 12496487 12496357 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12496013 12496081 12496013 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12495749 12495820 12495749 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12495492 12495564 12495492 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 CDS 12495340 12495396 12495340 ID=Msa0195630-mRNA-1:cds;Parent=Msa0195630-mRNA-1
chr2_1 three_prime_UTR 12494759 12495339 12494759 ID=Msa0195630-mRNA-1:three_prime_utr;Parent=Msa0195630-mRNA-1
Gene Sequence

>Msa0195630

ATGGAGGTGGGTCAGATGCGGAGACAGTGGGTGGACTACATCAAATCCATGTTCATGGAGGGTTTCTTGGATGGCCAGTTTCTCCAACTTCAGCAGCTACAAGATGAGAACAATCCTGAATTTGTTTTTGAAGTTGTTTCTCTTTTCTTTGATGATTCTGAGAGGATTCTCAAAGATCTGTCTTTTGCTGTGGATCAGCAAAGTGTTGACTTCAAAAAAGTTGATGCACATGTTCACCAGTTTAAGGGTAGCAGTGCAAGCATAGGCGCACAAAGGGTGAAAAATTCCTGCGTTGCTTTTCGCAATTTCTGTGAAGAACAAAACATAGATGCGTGCCGCAGGTGTTTGCAGCAAGTGAAGCAAGAGTACTTACTTGTCAAGAATAAGCTTGAAACATTGTTGAGGCTTGAGCAGCAGATAGTGGCAGCTGGTGGCTCAATCCCTATGATGGAACTGAACTGA

Protein sequence

>Msa0195630

MEVGQMRRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSVDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQVKQEYLLVKNKLETLLRLEQQIVAAGGSIPMMELN*