Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031440 | XP_003624592.1 | 98.824 | 340 | 4 | 0 | 1 | 340 | 1 | 340 | 0.0 | 703 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031440 | sp|Q84TD6|NAC47_ARATH | 51.892 | 370 | 129 | 13 | 4 | 340 | 6 | 359 | 1.25e-107 | 321 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031440 | G7KZD3 | 98.824 | 340 | 4 | 0 | 1 | 340 | 1 | 340 | 0.0 | 703 |
Gene ID | Type | Classification |
---|---|---|
Msa1031440 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010800 | Msa1031440 | 0.800024 | 1.749654e-48 | -8.615850e-47 |
Msa0081660 | Msa1031440 | 0.825602 | 4.285357e-54 | -8.615850e-47 |
Msa0082420 | Msa1031440 | 0.821108 | 4.809694e-53 | -8.615850e-47 |
Msa0114790 | Msa1031440 | 0.818075 | 2.368365e-52 | -8.615850e-47 |
Msa0662540 | Msa1031440 | 0.801222 | 9.969811e-49 | -8.615850e-47 |
Msa0830030 | Msa1031440 | 0.827632 | 1.405463e-54 | -8.615850e-47 |
Msa0127870 | Msa1031440 | 0.831148 | 1.967103e-55 | -8.615850e-47 |
Msa0174010 | Msa1031440 | 0.835749 | 1.400079e-56 | -8.615850e-47 |
Msa0213550 | Msa1031440 | 0.814385 | 1.582649e-51 | -8.615850e-47 |
Msa0390550 | Msa1031440 | 0.832743 | 7.942178e-56 | -8.615850e-47 |
Msa1031440 | Msa1062040 | 0.816461 | 5.465336e-52 | -8.615850e-47 |
Msa1031440 | Msa1070520 | 0.903919 | 2.108303e-79 | -8.615850e-47 |
Msa1031440 | Msa1101220 | 0.911527 | 5.494925e-83 | -8.615850e-47 |
Msa1031440 | Msa1107200 | 0.819009 | 1.454194e-52 | -8.615850e-47 |
Msa1031440 | Msa1150780 | 0.820709 | 5.942238e-53 | -8.615850e-47 |
Msa1031440 | Msa1158370 | 0.906862 | 9.424639e-81 | -8.615850e-47 |
Msa1031440 | Msa1208370 | 0.824250 | 8.937747e-54 | -8.615850e-47 |
Msa1031440 | Msa1359840 | 0.812994 | 3.204173e-51 | -8.615850e-47 |
Msa0256390 | Msa1031440 | 0.804064 | 2.584602e-49 | -8.615850e-47 |
Msa0306000 | Msa1031440 | 0.805205 | 1.493330e-49 | -8.615850e-47 |
Msa0331020 | Msa1031440 | 0.824519 | 7.726527e-54 | -8.615850e-47 |
Msa0484630 | Msa1031440 | 0.824316 | 8.620615e-54 | -8.615850e-47 |
Msa0600590 | Msa1031440 | 0.801074 | 1.068906e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031440 | MtrunA17_Chr7g0252971 | 98.824 | 340 | 4 | 0 | 1 | 340 | 1 | 340 | 0.0 | 703 |
Msa1031440 | MtrunA17_Chr2g0318101 | 67.172 | 198 | 46 | 5 | 2 | 187 | 9 | 199 | 1.49e-91 | 277 |
Msa1031440 | MtrunA17_Chr4g0047841 | 64.211 | 190 | 42 | 3 | 3 | 173 | 10 | 192 | 3.75e-84 | 258 |
Msa1031440 | MtrunA17_Chr5g0417791 | 54.202 | 238 | 85 | 5 | 8 | 244 | 3 | 217 | 2.98e-80 | 245 |
Msa1031440 | MtrunA17_Chr7g0263931 | 50.763 | 262 | 96 | 7 | 5 | 265 | 8 | 237 | 1.41e-79 | 246 |
Msa1031440 | MtrunA17_Chr4g0042561 | 55.310 | 226 | 80 | 5 | 6 | 231 | 7 | 211 | 5.50e-79 | 242 |
Msa1031440 | MtrunA17_Chr2g0326361 | 65.714 | 175 | 51 | 3 | 8 | 181 | 14 | 180 | 9.65e-79 | 243 |
Msa1031440 | MtrunA17_Chr3g0124761 | 61.497 | 187 | 60 | 3 | 5 | 191 | 4 | 178 | 1.55e-78 | 242 |
Msa1031440 | MtrunA17_Chr8g0384721 | 58.564 | 181 | 65 | 1 | 8 | 188 | 7 | 177 | 1.04e-73 | 229 |
Msa1031440 | MtrunA17_Chr2g0318081 | 63.314 | 169 | 49 | 3 | 5 | 173 | 13 | 168 | 3.56e-73 | 230 |
Msa1031440 | MtrunA17_Chr8g0359921 | 63.429 | 175 | 47 | 4 | 1 | 169 | 1 | 164 | 6.80e-73 | 229 |
Msa1031440 | MtrunA17_Chr3g0130731 | 61.212 | 165 | 53 | 2 | 5 | 169 | 4 | 157 | 4.05e-68 | 215 |
Msa1031440 | MtrunA17_Chr5g0417001 | 43.396 | 265 | 127 | 6 | 10 | 260 | 16 | 271 | 2.02e-61 | 201 |
Msa1031440 | MtrunA17_Chr2g0309891 | 49.231 | 195 | 78 | 5 | 8 | 200 | 6 | 181 | 1.56e-59 | 195 |
Msa1031440 | MtrunA17_Chr6g0453131 | 55.030 | 169 | 63 | 4 | 7 | 170 | 14 | 174 | 1.73e-59 | 196 |
Msa1031440 | MtrunA17_Chr3g0091921 | 38.816 | 304 | 153 | 6 | 5 | 291 | 13 | 300 | 3.13e-59 | 192 |
Msa1031440 | MtrunA17_Chr6g0484441 | 55.422 | 166 | 59 | 3 | 5 | 170 | 2 | 152 | 3.39e-59 | 193 |
Msa1031440 | MtrunA17_Chr6g0453451 | 52.410 | 166 | 68 | 2 | 8 | 173 | 20 | 174 | 7.32e-59 | 192 |
Msa1031440 | MtrunA17_Chr8g0361731 | 54.217 | 166 | 64 | 4 | 10 | 170 | 16 | 174 | 1.91e-58 | 193 |
Msa1031440 | MtrunA17_Chr7g0253011 | 52.874 | 174 | 66 | 4 | 2 | 170 | 10 | 172 | 2.28e-57 | 190 |
Msa1031440 | MtrunA17_Chr7g0214071 | 51.705 | 176 | 65 | 4 | 5 | 178 | 12 | 169 | 2.63e-57 | 186 |
Msa1031440 | MtrunA17_Chr4g0060931 | 53.614 | 166 | 66 | 3 | 5 | 170 | 14 | 168 | 5.06e-57 | 189 |
Msa1031440 | MtrunA17_Chr4g0018391 | 49.701 | 167 | 66 | 3 | 6 | 169 | 5 | 156 | 2.00e-55 | 184 |
Msa1031440 | MtrunA17_Chr6g0481091 | 44.271 | 192 | 81 | 4 | 6 | 184 | 4 | 182 | 2.25e-55 | 181 |
Msa1031440 | MtrunA17_Chr2g0316971 | 53.333 | 165 | 68 | 2 | 6 | 170 | 21 | 176 | 3.79e-55 | 184 |
Msa1031440 | MtrunA17_Chr5g0398971 | 49.102 | 167 | 69 | 3 | 6 | 169 | 5 | 158 | 4.14e-55 | 183 |
Msa1031440 | MtrunA17_Chr1g0147421 | 49.727 | 183 | 74 | 4 | 8 | 187 | 27 | 194 | 4.95e-55 | 183 |
Msa1031440 | MtrunA17_Chr4g0017921 | 47.027 | 185 | 79 | 3 | 1 | 182 | 1 | 169 | 5.35e-55 | 183 |
Msa1031440 | MtrunA17_Chr3g0139331 | 50.292 | 171 | 68 | 3 | 2 | 170 | 5 | 160 | 2.18e-54 | 181 |
Msa1031440 | MtrunA17_Chr2g0309331 | 47.368 | 171 | 73 | 3 | 2 | 169 | 4 | 160 | 5.40e-54 | 180 |
Msa1031440 | MtrunA17_Chr5g0405211 | 46.196 | 184 | 79 | 4 | 1 | 180 | 1 | 168 | 6.15e-54 | 180 |
Msa1031440 | MtrunA17_Chr5g0433781 | 50.877 | 171 | 69 | 3 | 6 | 174 | 4 | 161 | 7.84e-54 | 187 |
Msa1031440 | MtrunA17_Chr4g0056541 | 47.904 | 167 | 69 | 3 | 6 | 169 | 5 | 156 | 2.19e-53 | 179 |
Msa1031440 | MtrunA17_Chr8g0372121 | 47.059 | 170 | 68 | 4 | 5 | 169 | 3 | 155 | 3.63e-53 | 177 |
Msa1031440 | MtrunA17_Chr1g0183741 | 42.857 | 203 | 89 | 3 | 8 | 210 | 10 | 185 | 4.22e-53 | 176 |
Msa1031440 | MtrunA17_Chr3g0109821 | 52.663 | 169 | 62 | 4 | 6 | 170 | 4 | 158 | 1.90e-52 | 183 |
Msa1031440 | MtrunA17_Chr5g0442771 | 49.091 | 165 | 73 | 2 | 10 | 169 | 20 | 178 | 2.32e-52 | 175 |
Msa1031440 | MtrunA17_Chr6g0461661 | 47.753 | 178 | 84 | 3 | 7 | 184 | 17 | 185 | 6.03e-52 | 176 |
Msa1031440 | MtrunA17_Chr5g0400461 | 47.647 | 170 | 78 | 4 | 6 | 173 | 4 | 164 | 1.56e-51 | 174 |
Msa1031440 | MtrunA17_Chr8g0346001 | 47.977 | 173 | 73 | 4 | 5 | 169 | 12 | 175 | 3.05e-51 | 176 |
Msa1031440 | MtrunA17_Chr2g0312321 | 46.707 | 167 | 75 | 3 | 5 | 171 | 8 | 160 | 4.99e-51 | 171 |
Msa1031440 | MtrunA17_Chr1g0200561 | 47.273 | 165 | 69 | 3 | 8 | 169 | 19 | 168 | 5.77e-51 | 172 |
Msa1031440 | MtrunA17_Chr4g0076731 | 50.920 | 163 | 62 | 3 | 10 | 170 | 56 | 202 | 7.87e-51 | 174 |
Msa1031440 | MtrunA17_Chr2g0311651 | 47.337 | 169 | 76 | 3 | 10 | 170 | 24 | 187 | 1.17e-50 | 171 |
Msa1031440 | MtrunA17_Chr4g0054791 | 45.856 | 181 | 82 | 4 | 8 | 182 | 6 | 176 | 2.55e-49 | 167 |
Msa1031440 | MtrunA17_Chr7g0261411 | 48.125 | 160 | 68 | 3 | 8 | 167 | 10 | 154 | 2.62e-49 | 166 |
Msa1031440 | MtrunA17_Chr8g0385991 | 46.774 | 186 | 79 | 6 | 6 | 183 | 12 | 185 | 2.94e-49 | 164 |
Msa1031440 | MtrunA17_Chr2g0311661 | 47.337 | 169 | 76 | 3 | 10 | 170 | 23 | 186 | 1.37e-48 | 165 |
Msa1031440 | MtrunA17_Chr3g0131911 | 49.405 | 168 | 76 | 3 | 6 | 171 | 12 | 172 | 1.49e-48 | 163 |
Msa1031440 | MtrunA17_Chr7g0217721 | 44.565 | 184 | 82 | 2 | 1 | 173 | 12 | 186 | 1.43e-47 | 164 |
Msa1031440 | MtrunA17_Chr4g0038751 | 37.692 | 260 | 137 | 5 | 1 | 251 | 9 | 252 | 2.74e-47 | 161 |
Msa1031440 | MtrunA17_Chr3g0130101 | 43.827 | 162 | 76 | 3 | 10 | 169 | 9 | 157 | 5.64e-46 | 160 |
Msa1031440 | MtrunA17_Chr3g0144271 | 53.237 | 139 | 57 | 2 | 5 | 142 | 20 | 151 | 1.17e-45 | 160 |
Msa1031440 | MtrunA17_Chr5g0428991 | 46.961 | 181 | 73 | 4 | 8 | 182 | 25 | 188 | 1.47e-45 | 164 |
Msa1031440 | MtrunA17_Chr7g0217711 | 50.704 | 142 | 61 | 1 | 1 | 142 | 12 | 144 | 7.52e-44 | 149 |
Msa1031440 | MtrunA17_Chr1g0197351 | 47.024 | 168 | 76 | 3 | 6 | 169 | 40 | 198 | 8.37e-44 | 157 |
Msa1031440 | MtrunA17_Chr1g0201021 | 45.399 | 163 | 74 | 4 | 10 | 170 | 21 | 170 | 1.04e-43 | 158 |
Msa1031440 | MtrunA17_Chr3g0128151 | 40.000 | 240 | 110 | 7 | 8 | 231 | 22 | 243 | 1.78e-43 | 158 |
Msa1031440 | MtrunA17_Chr1g0197361 | 39.024 | 205 | 105 | 6 | 10 | 211 | 10 | 197 | 1.02e-42 | 155 |
Msa1031440 | MtrunA17_Chr3g0128111 | 40.394 | 203 | 103 | 4 | 11 | 211 | 45 | 231 | 5.47e-42 | 146 |
Msa1031440 | MtrunA17_Chr3g0092671 | 39.336 | 211 | 103 | 7 | 10 | 217 | 7 | 195 | 7.80e-42 | 152 |
Msa1031440 | MtrunA17_Chr8g0364791 | 42.683 | 164 | 79 | 3 | 8 | 169 | 6 | 156 | 1.80e-41 | 150 |
Msa1031440 | MtrunA17_Chr8g0345671 | 44.578 | 166 | 66 | 6 | 7 | 166 | 10 | 155 | 1.16e-39 | 144 |
Msa1031440 | MtrunA17_Chr8g0384201 | 41.463 | 164 | 81 | 3 | 8 | 169 | 6 | 156 | 6.80e-39 | 144 |
Msa1031440 | MtrunA17_Chr4g0026141 | 40.719 | 167 | 81 | 5 | 8 | 167 | 5 | 160 | 7.84e-35 | 128 |
Msa1031440 | MtrunA17_Chr7g0266701 | 32.932 | 249 | 138 | 8 | 7 | 234 | 3 | 243 | 9.26e-34 | 125 |
Msa1031440 | MtrunA17_Chr2g0321741 | 37.640 | 178 | 87 | 6 | 28 | 202 | 12 | 168 | 1.21e-33 | 127 |
Msa1031440 | MtrunA17_Chr8g0345691 | 40.606 | 165 | 74 | 6 | 7 | 166 | 11 | 156 | 1.32e-33 | 128 |
Msa1031440 | MtrunA17_Chr8g0345711 | 40.120 | 167 | 82 | 6 | 8 | 164 | 12 | 170 | 3.34e-33 | 121 |
Msa1031440 | MtrunA17_Chr2g0321631 | 36.408 | 206 | 99 | 8 | 9 | 199 | 5 | 193 | 1.55e-32 | 121 |
Msa1031440 | MtrunA17_Chr4g0050701 | 36.747 | 166 | 88 | 3 | 8 | 171 | 11 | 161 | 2.52e-32 | 119 |
Msa1031440 | MtrunA17_Chr3g0113001 | 48.718 | 117 | 50 | 2 | 57 | 173 | 14 | 120 | 2.10e-31 | 120 |
Msa1031440 | MtrunA17_Chr8g0345731 | 39.855 | 138 | 71 | 5 | 8 | 140 | 24 | 154 | 2.94e-27 | 105 |
Msa1031440 | MtrunA17_Chr8g0345721 | 36.970 | 165 | 64 | 5 | 11 | 143 | 38 | 194 | 3.37e-26 | 103 |
Msa1031440 | MtrunA17_Chr8g0384351 | 37.791 | 172 | 73 | 7 | 1 | 171 | 2 | 140 | 3.82e-26 | 102 |
Msa1031440 | MtrunA17_Chr8g0345741 | 41.129 | 124 | 62 | 4 | 21 | 141 | 4 | 119 | 6.37e-25 | 98.6 |
Msa1031440 | MtrunA17_Chr8g0345701 | 38.365 | 159 | 71 | 6 | 6 | 147 | 5 | 153 | 2.73e-24 | 97.8 |
Msa1031440 | MtrunA17_Chr3g0113031 | 44.660 | 103 | 48 | 1 | 71 | 173 | 3 | 96 | 1.03e-23 | 98.6 |
Msa1031440 | MtrunA17_Chr7g0243371 | 51.220 | 82 | 33 | 1 | 61 | 142 | 17 | 91 | 1.95e-22 | 90.9 |
Msa1031440 | MtrunA17_Chr7g0251661 | 31.690 | 142 | 84 | 4 | 1 | 140 | 3 | 133 | 2.24e-20 | 86.7 |
Msa1031440 | MtrunA17_Chr3g0130321 | 34.104 | 173 | 89 | 8 | 8 | 171 | 7 | 163 | 5.93e-20 | 86.7 |
Msa1031440 | MtrunA17_Chr7g0251671 | 31.126 | 151 | 89 | 5 | 7 | 154 | 9 | 147 | 1.57e-18 | 81.6 |
Msa1031440 | MtrunA17_Chr7g0251651 | 32.593 | 135 | 78 | 4 | 8 | 140 | 18 | 141 | 8.03e-18 | 80.5 |
Msa1031440 | MtrunA17_Chr7g0274971 | 30.120 | 166 | 94 | 7 | 14 | 172 | 11 | 161 | 5.19e-12 | 64.7 |
Msa1031440 | MtrunA17_Chr3g0113011 | 50.000 | 56 | 28 | 0 | 1 | 56 | 12 | 67 | 4.16e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031440 | AT3G04070.1 | 51.892 | 370 | 129 | 13 | 4 | 340 | 6 | 359 | 1.27e-108 | 321 |
Msa1031440 | AT3G04070.2 | 53.390 | 354 | 132 | 13 | 4 | 340 | 6 | 343 | 2.81e-108 | 320 |
Msa1031440 | AT1G61110.1 | 68.927 | 177 | 39 | 4 | 1 | 169 | 9 | 177 | 3.15e-84 | 258 |
Msa1031440 | AT1G69490.1 | 51.698 | 265 | 112 | 5 | 3 | 263 | 4 | 256 | 2.24e-83 | 254 |
Msa1031440 | AT3G15510.1 | 68.639 | 169 | 39 | 3 | 12 | 173 | 21 | 182 | 4.33e-81 | 251 |
Msa1031440 | AT1G01720.1 | 56.219 | 201 | 78 | 1 | 8 | 208 | 7 | 197 | 7.81e-77 | 238 |
Msa1031440 | AT1G52880.1 | 68.902 | 164 | 40 | 3 | 12 | 170 | 21 | 178 | 2.10e-76 | 238 |
Msa1031440 | AT1G77450.1 | 66.049 | 162 | 44 | 3 | 8 | 169 | 10 | 160 | 2.39e-74 | 230 |
Msa1031440 | AT4G27410.2 | 63.253 | 166 | 48 | 3 | 5 | 170 | 11 | 163 | 2.50e-74 | 231 |
Msa1031440 | AT3G15500.1 | 62.722 | 169 | 50 | 3 | 5 | 173 | 11 | 166 | 3.86e-72 | 227 |
Msa1031440 | AT1G52890.1 | 61.538 | 169 | 52 | 2 | 5 | 173 | 11 | 166 | 4.25e-72 | 226 |
Msa1031440 | AT4G27410.3 | 57.377 | 183 | 48 | 4 | 5 | 170 | 11 | 180 | 4.54e-70 | 221 |
Msa1031440 | AT5G08790.1 | 60.241 | 166 | 55 | 2 | 5 | 169 | 4 | 159 | 3.40e-69 | 218 |
Msa1031440 | AT5G63790.1 | 60.843 | 166 | 54 | 2 | 5 | 169 | 47 | 202 | 7.31e-69 | 218 |
Msa1031440 | AT5G63790.2 | 60.843 | 166 | 54 | 2 | 5 | 169 | 57 | 212 | 1.10e-68 | 218 |
Msa1031440 | AT3G18400.1 | 53.846 | 169 | 64 | 3 | 5 | 173 | 2 | 156 | 6.79e-61 | 197 |
Msa1031440 | AT5G39610.1 | 53.939 | 165 | 65 | 3 | 5 | 169 | 17 | 170 | 1.34e-58 | 191 |
Msa1031440 | AT5G61430.1 | 44.304 | 237 | 114 | 6 | 5 | 239 | 13 | 233 | 5.56e-58 | 191 |
Msa1031440 | AT5G07680.1 | 53.614 | 166 | 66 | 3 | 5 | 170 | 14 | 168 | 9.84e-58 | 190 |
Msa1031440 | AT2G33480.2 | 53.659 | 164 | 58 | 4 | 8 | 171 | 15 | 160 | 1.06e-57 | 188 |
Msa1031440 | AT2G33480.1 | 53.659 | 164 | 60 | 4 | 8 | 171 | 15 | 162 | 1.80e-57 | 187 |
Msa1031440 | AT5G53950.1 | 52.907 | 172 | 72 | 2 | 8 | 179 | 17 | 179 | 2.02e-57 | 191 |
Msa1031440 | AT5G07680.2 | 53.659 | 164 | 65 | 3 | 7 | 170 | 2 | 154 | 4.18e-57 | 188 |
Msa1031440 | AT5G13180.1 | 54.819 | 166 | 60 | 3 | 8 | 173 | 14 | 164 | 1.53e-56 | 184 |
Msa1031440 | AT5G18270.2 | 49.714 | 175 | 78 | 2 | 2 | 176 | 15 | 179 | 3.70e-56 | 186 |
Msa1031440 | AT3G29035.1 | 60.870 | 138 | 45 | 2 | 5 | 142 | 21 | 149 | 6.89e-56 | 185 |
Msa1031440 | AT3G17730.1 | 39.921 | 253 | 131 | 6 | 6 | 253 | 4 | 240 | 7.47e-56 | 182 |
Msa1031440 | AT3G04060.1 | 36.644 | 292 | 136 | 7 | 6 | 270 | 18 | 287 | 8.64e-56 | 185 |
Msa1031440 | AT5G18270.1 | 49.143 | 175 | 79 | 2 | 2 | 176 | 15 | 179 | 1.56e-55 | 184 |
Msa1031440 | AT5G39820.1 | 49.180 | 183 | 65 | 5 | 10 | 173 | 22 | 195 | 6.54e-55 | 183 |
Msa1031440 | AT2G24430.2 | 52.121 | 165 | 67 | 2 | 8 | 172 | 16 | 168 | 6.65e-55 | 182 |
Msa1031440 | AT2G24430.1 | 52.121 | 165 | 67 | 2 | 8 | 172 | 16 | 168 | 6.65e-55 | 182 |
Msa1031440 | AT1G26870.1 | 51.786 | 168 | 69 | 3 | 8 | 170 | 16 | 176 | 6.83e-55 | 185 |
Msa1031440 | AT3G03200.1 | 50.909 | 165 | 65 | 4 | 8 | 169 | 6 | 157 | 8.62e-55 | 186 |
Msa1031440 | AT3G15170.1 | 44.595 | 222 | 96 | 5 | 8 | 224 | 20 | 219 | 1.27e-54 | 181 |
Msa1031440 | AT1G76420.1 | 50.888 | 169 | 65 | 4 | 5 | 170 | 19 | 172 | 5.99e-54 | 180 |
Msa1031440 | AT1G65910.1 | 48.235 | 170 | 73 | 3 | 6 | 173 | 4 | 160 | 2.53e-53 | 185 |
Msa1031440 | AT1G71930.2 | 45.833 | 168 | 73 | 3 | 5 | 169 | 6 | 158 | 2.68e-53 | 178 |
Msa1031440 | AT1G71930.1 | 45.833 | 168 | 73 | 3 | 5 | 169 | 6 | 158 | 2.68e-53 | 178 |
Msa1031440 | AT5G17260.1 | 49.701 | 167 | 68 | 4 | 6 | 169 | 4 | 157 | 7.99e-53 | 181 |
Msa1031440 | AT4G10350.1 | 47.486 | 179 | 78 | 3 | 8 | 183 | 9 | 174 | 8.25e-53 | 177 |
Msa1031440 | AT1G12260.2 | 45.930 | 172 | 75 | 3 | 6 | 174 | 5 | 161 | 8.38e-53 | 177 |
Msa1031440 | AT5G62380.2 | 43.655 | 197 | 90 | 5 | 7 | 199 | 6 | 185 | 1.01e-52 | 177 |
Msa1031440 | AT5G62380.1 | 43.655 | 197 | 90 | 5 | 7 | 199 | 6 | 185 | 1.01e-52 | 177 |
Msa1031440 | AT1G12260.1 | 45.930 | 172 | 75 | 3 | 6 | 174 | 5 | 161 | 1.23e-52 | 179 |
Msa1031440 | AT2G18060.3 | 39.076 | 238 | 120 | 6 | 8 | 238 | 9 | 228 | 1.25e-52 | 177 |
Msa1031440 | AT2G18060.1 | 39.076 | 238 | 120 | 6 | 8 | 238 | 9 | 228 | 1.25e-52 | 177 |
Msa1031440 | AT2G43000.1 | 49.375 | 160 | 69 | 2 | 10 | 169 | 20 | 167 | 4.27e-52 | 174 |
Msa1031440 | AT2G46770.1 | 46.893 | 177 | 73 | 4 | 5 | 169 | 13 | 180 | 4.70e-52 | 176 |
Msa1031440 | AT4G36160.2 | 40.969 | 227 | 99 | 7 | 7 | 226 | 13 | 211 | 5.77e-52 | 176 |
Msa1031440 | AT4G36160.1 | 40.969 | 227 | 99 | 7 | 7 | 226 | 9 | 207 | 6.15e-52 | 176 |
Msa1031440 | AT4G36160.3 | 40.969 | 227 | 99 | 7 | 7 | 226 | 9 | 207 | 6.15e-52 | 176 |
Msa1031440 | AT1G33280.1 | 48.555 | 173 | 68 | 4 | 1 | 169 | 1 | 156 | 8.29e-52 | 174 |
Msa1031440 | AT1G62700.1 | 47.399 | 173 | 69 | 4 | 6 | 173 | 5 | 160 | 8.62e-52 | 176 |
Msa1031440 | AT1G62700.2 | 47.399 | 173 | 69 | 4 | 6 | 173 | 5 | 160 | 8.62e-52 | 176 |
Msa1031440 | AT1G79580.3 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.40e-51 | 175 |
Msa1031440 | AT1G79580.5 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.40e-51 | 175 |
Msa1031440 | AT1G79580.4 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.40e-51 | 175 |
Msa1031440 | AT1G79580.2 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.40e-51 | 175 |
Msa1031440 | AT1G79580.1 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.40e-51 | 175 |
Msa1031440 | AT3G12977.1 | 49.398 | 166 | 70 | 6 | 5 | 169 | 15 | 167 | 3.34e-51 | 171 |
Msa1031440 | AT1G56010.2 | 46.988 | 166 | 77 | 3 | 5 | 169 | 16 | 171 | 6.70e-51 | 172 |
Msa1031440 | AT2G02450.2 | 52.174 | 161 | 61 | 4 | 10 | 169 | 53 | 198 | 1.73e-50 | 173 |
Msa1031440 | AT2G02450.1 | 52.174 | 161 | 61 | 4 | 10 | 169 | 53 | 198 | 1.78e-50 | 172 |
Msa1031440 | AT5G66300.1 | 45.783 | 166 | 73 | 3 | 7 | 169 | 11 | 162 | 6.53e-50 | 169 |
Msa1031440 | AT3G61910.1 | 44.944 | 178 | 77 | 4 | 5 | 170 | 8 | 176 | 1.36e-49 | 169 |
Msa1031440 | AT3G10480.2 | 48.795 | 166 | 70 | 3 | 6 | 169 | 25 | 177 | 1.39e-49 | 172 |
Msa1031440 | AT4G17980.2 | 47.059 | 170 | 71 | 4 | 8 | 171 | 6 | 162 | 1.55e-49 | 167 |
Msa1031440 | AT4G17980.1 | 46.328 | 177 | 74 | 5 | 1 | 171 | 1 | 162 | 1.60e-49 | 167 |
Msa1031440 | AT3G10480.1 | 48.795 | 166 | 71 | 3 | 6 | 169 | 25 | 178 | 1.61e-49 | 172 |
Msa1031440 | AT1G33060.2 | 51.220 | 164 | 65 | 3 | 8 | 169 | 24 | 174 | 2.13e-49 | 175 |
Msa1031440 | AT3G10500.1 | 47.305 | 167 | 73 | 3 | 6 | 170 | 7 | 160 | 2.30e-49 | 173 |
Msa1031440 | AT1G33060.1 | 51.220 | 164 | 65 | 3 | 8 | 169 | 24 | 174 | 2.37e-49 | 175 |
Msa1031440 | AT5G46590.1 | 46.988 | 166 | 75 | 3 | 8 | 171 | 6 | 160 | 2.58e-49 | 167 |
Msa1031440 | AT1G32770.1 | 46.552 | 174 | 75 | 5 | 5 | 169 | 13 | 177 | 4.83e-49 | 168 |
Msa1031440 | AT1G54330.1 | 49.091 | 165 | 66 | 4 | 7 | 169 | 5 | 153 | 8.03e-49 | 166 |
Msa1031440 | AT5G04410.1 | 47.305 | 167 | 73 | 3 | 6 | 170 | 7 | 160 | 8.57e-49 | 172 |
Msa1031440 | AT3G10490.1 | 46.471 | 170 | 77 | 3 | 6 | 173 | 25 | 182 | 9.24e-49 | 164 |
Msa1031440 | AT5G46590.2 | 51.064 | 141 | 59 | 2 | 8 | 146 | 6 | 138 | 1.08e-48 | 165 |
Msa1031440 | AT4G35580.3 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.38e-48 | 170 |
Msa1031440 | AT4G35580.2 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.42e-48 | 170 |
Msa1031440 | AT1G32510.1 | 45.856 | 181 | 86 | 4 | 8 | 181 | 6 | 181 | 2.51e-48 | 164 |
Msa1031440 | AT4G35580.1 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.77e-48 | 170 |
Msa1031440 | AT3G10490.2 | 47.590 | 166 | 73 | 3 | 6 | 169 | 25 | 178 | 2.17e-47 | 166 |
Msa1031440 | AT4G28530.1 | 45.055 | 182 | 69 | 5 | 6 | 171 | 8 | 174 | 4.17e-47 | 163 |
Msa1031440 | AT2G17040.1 | 46.914 | 162 | 69 | 3 | 10 | 170 | 8 | 153 | 4.29e-47 | 160 |
Msa1031440 | AT5G24590.2 | 42.654 | 211 | 98 | 6 | 7 | 206 | 12 | 210 | 1.40e-46 | 164 |
Msa1031440 | AT3G49530.2 | 43.956 | 182 | 88 | 3 | 7 | 186 | 12 | 181 | 2.77e-45 | 159 |
Msa1031440 | AT3G49530.1 | 43.956 | 182 | 88 | 3 | 7 | 186 | 12 | 181 | 6.03e-45 | 160 |
Msa1031440 | AT3G10480.3 | 41.709 | 199 | 69 | 4 | 6 | 169 | 25 | 211 | 1.70e-44 | 160 |
Msa1031440 | AT1G34180.3 | 46.012 | 163 | 73 | 5 | 10 | 170 | 18 | 167 | 2.47e-44 | 158 |
Msa1031440 | AT5G64060.1 | 43.114 | 167 | 80 | 3 | 5 | 169 | 3 | 156 | 8.08e-44 | 154 |
Msa1031440 | AT3G12910.1 | 40.278 | 216 | 111 | 5 | 10 | 214 | 23 | 231 | 9.46e-44 | 153 |
Msa1031440 | AT1G34180.1 | 44.785 | 163 | 75 | 4 | 10 | 170 | 18 | 167 | 1.57e-43 | 158 |
Msa1031440 | AT1G34190.1 | 44.785 | 163 | 75 | 5 | 10 | 170 | 18 | 167 | 5.35e-43 | 156 |
Msa1031440 | AT2G27300.1 | 41.081 | 185 | 88 | 4 | 1 | 184 | 7 | 171 | 1.89e-42 | 150 |
Msa1031440 | AT1G34180.4 | 42.857 | 175 | 73 | 5 | 10 | 170 | 18 | 179 | 2.55e-42 | 153 |
Msa1031440 | AT5G09330.5 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.43e-42 | 152 |
Msa1031440 | AT5G09330.2 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.43e-42 | 152 |
Msa1031440 | AT5G09330.4 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.43e-42 | 152 |
Msa1031440 | AT5G09330.3 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.43e-42 | 152 |
Msa1031440 | AT5G09330.1 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.43e-42 | 152 |
Msa1031440 | AT1G34180.2 | 42.857 | 175 | 73 | 5 | 10 | 170 | 18 | 179 | 1.68e-41 | 152 |
Msa1031440 | AT3G44290.2 | 40.491 | 163 | 76 | 3 | 10 | 171 | 16 | 158 | 1.50e-39 | 139 |
Msa1031440 | AT3G44290.1 | 40.491 | 163 | 76 | 3 | 10 | 171 | 16 | 158 | 9.56e-39 | 140 |
Msa1031440 | AT5G22290.1 | 40.625 | 160 | 75 | 4 | 10 | 168 | 23 | 163 | 3.32e-38 | 139 |
Msa1031440 | AT5G04395.1 | 41.615 | 161 | 75 | 2 | 5 | 152 | 25 | 179 | 1.76e-37 | 133 |
Msa1031440 | AT1G32870.2 | 46.988 | 166 | 71 | 5 | 8 | 170 | 10 | 161 | 3.95e-37 | 140 |
Msa1031440 | AT1G32870.1 | 46.988 | 166 | 71 | 5 | 8 | 170 | 10 | 161 | 4.44e-37 | 140 |
Msa1031440 | AT1G32870.3 | 46.988 | 166 | 71 | 5 | 8 | 170 | 46 | 197 | 7.38e-37 | 139 |
Msa1031440 | AT5G61430.2 | 46.207 | 145 | 63 | 4 | 57 | 201 | 2 | 131 | 2.70e-34 | 127 |
Msa1031440 | AT1G56010.1 | 48.673 | 113 | 48 | 2 | 57 | 169 | 2 | 104 | 1.10e-32 | 122 |
Msa1031440 | AT2G33480.3 | 52.252 | 111 | 40 | 4 | 61 | 171 | 8 | 105 | 2.13e-31 | 117 |
Msa1031440 | AT5G64530.1 | 35.838 | 173 | 82 | 4 | 7 | 169 | 2 | 155 | 3.61e-31 | 116 |
Msa1031440 | AT4G10350.2 | 46.341 | 123 | 53 | 2 | 61 | 183 | 18 | 127 | 7.58e-31 | 118 |
Msa1031440 | AT3G12977.2 | 48.673 | 113 | 46 | 4 | 57 | 169 | 14 | 114 | 9.02e-31 | 116 |
Msa1031440 | AT5G64530.2 | 41.304 | 138 | 62 | 3 | 7 | 144 | 2 | 120 | 3.49e-30 | 113 |
Msa1031440 | AT3G44350.2 | 37.647 | 170 | 86 | 6 | 8 | 170 | 5 | 161 | 9.87e-29 | 111 |
Msa1031440 | AT4G28530.2 | 48.182 | 110 | 41 | 2 | 6 | 99 | 8 | 117 | 6.98e-28 | 111 |
Msa1031440 | AT3G44350.1 | 39.310 | 145 | 71 | 4 | 8 | 145 | 5 | 139 | 1.41e-27 | 106 |
Msa1031440 | AT5G22380.1 | 38.415 | 164 | 83 | 6 | 11 | 167 | 8 | 160 | 1.20e-26 | 105 |
Msa1031440 | AT4G01520.1 | 35.714 | 182 | 98 | 6 | 9 | 186 | 5 | 171 | 3.97e-26 | 106 |
Msa1031440 | AT1G02230.1 | 41.912 | 136 | 66 | 5 | 9 | 140 | 4 | 130 | 1.07e-25 | 105 |
Msa1031440 | AT4G01540.4 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 2.30e-25 | 105 |
Msa1031440 | AT4G01540.3 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 3.34e-25 | 105 |
Msa1031440 | AT4G01550.1 | 40.741 | 135 | 71 | 3 | 11 | 142 | 7 | 135 | 4.11e-25 | 105 |
Msa1031440 | AT4G01540.1 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 7.29e-25 | 105 |
Msa1031440 | AT4G01540.2 | 35.165 | 182 | 95 | 6 | 11 | 186 | 7 | 171 | 7.32e-25 | 104 |
Msa1031440 | AT3G04420.2 | 41.176 | 136 | 67 | 4 | 9 | 140 | 4 | 130 | 3.51e-24 | 100 |
Msa1031440 | AT1G02250.1 | 41.912 | 136 | 66 | 6 | 9 | 140 | 4 | 130 | 1.08e-22 | 97.8 |
Msa1031440 | AT2G43000.2 | 44.000 | 100 | 44 | 2 | 70 | 169 | 2 | 89 | 5.81e-22 | 92.4 |
Msa1031440 | AT5G50820.1 | 28.713 | 202 | 120 | 7 | 1 | 199 | 10 | 190 | 3.49e-20 | 87.4 |
Msa1031440 | AT5G14000.2 | 37.681 | 138 | 73 | 4 | 8 | 143 | 15 | 141 | 4.55e-20 | 85.9 |
Msa1031440 | AT5G14000.1 | 37.681 | 138 | 73 | 4 | 8 | 143 | 15 | 141 | 1.29e-19 | 86.3 |
Msa1031440 | AT1G01010.1 | 38.235 | 136 | 73 | 6 | 11 | 140 | 6 | 136 | 5.28e-19 | 87.8 |
Msa1031440 | AT1G02220.1 | 36.364 | 143 | 75 | 5 | 9 | 147 | 4 | 134 | 6.97e-19 | 87.4 |
Msa1031440 | AT3G56530.1 | 33.918 | 171 | 89 | 6 | 3 | 167 | 47 | 199 | 2.33e-18 | 84.7 |
Msa1031440 | AT3G10490.4 | 43.333 | 90 | 39 | 2 | 81 | 170 | 2 | 79 | 1.49e-17 | 82.8 |
Msa1031440 | AT3G10490.3 | 43.333 | 90 | 39 | 2 | 81 | 170 | 2 | 79 | 1.49e-17 | 82.8 |
Msa1031440 | AT2G18060.2 | 31.847 | 157 | 85 | 5 | 86 | 238 | 2 | 140 | 4.93e-16 | 77.4 |
Msa1031440 | AT3G55210.1 | 30.337 | 178 | 85 | 8 | 8 | 167 | 11 | 167 | 8.61e-15 | 73.9 |
Msa1031440 | AT3G04430.1 | 33.838 | 198 | 106 | 7 | 14 | 197 | 6 | 192 | 2.24e-13 | 68.6 |
Find 102 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTAATTTGTGGTATTT+TGG | 0.114756 | 7_1:-66093356 | None:intergenic |
GAAGAATCTTTGAGCTTAAT+AGG | 0.214933 | 7_1:-66092589 | None:intergenic |
CCAAACAGGGCAGCTGCTTC+AGG | 0.233922 | 7_1:+66092385 | Msa1031440:CDS |
CAAAGGGTATTAAGACTAAT+TGG | 0.272980 | 7_1:+66092530 | Msa1031440:CDS |
ATGATGACATTGGTGTAATT+TGG | 0.285260 | 7_1:-66093442 | None:intergenic |
TCATACTGTGAATTGATGTT+AGG | 0.286405 | 7_1:-66093259 | None:intergenic |
CTGTTTGGCCTTGCACCATT+TGG | 0.309858 | 7_1:-66092370 | None:intergenic |
CCTAAAACCTGGTGGCAAAT+TGG | 0.316582 | 7_1:-66092010 | None:intergenic |
GGAAGGGGTTAGGACCTATT+TGG | 0.316667 | 7_1:+66093547 | Msa1031440:three_prime_UTR |
TCAGGAATTGGAACAAGTTC+AGG | 0.323297 | 7_1:+66093067 | Msa1031440:CDS |
GAACATTATTGGTGTCAAAA+AGG | 0.335100 | 7_1:+66092480 | Msa1031440:CDS |
TAAGTAAGATTTCTAGAAGT+TGG | 0.342238 | 7_1:+66093414 | Msa1031440:three_prime_UTR |
TAATTTGTTTGTGTGTTGTT+GGG | 0.346175 | 7_1:+66093668 | Msa1031440:three_prime_UTR |
CCTGAAGCAGCTGCCCTGTT+TGG | 0.348250 | 7_1:-66092385 | None:intergenic |
AATTGTTGCTAGTGTTGATT+TGG | 0.352114 | 7_1:-66093126 | None:intergenic |
TGTTTGGCCTTGCACCATTT+GGG | 0.356073 | 7_1:-66092369 | None:intergenic |
GAACTCAAGTATTTCTTTGA+TGG | 0.365426 | 7_1:-66093223 | None:intergenic |
CAAATGGTGCAAGGCCAAAC+AGG | 0.366982 | 7_1:+66092371 | Msa1031440:CDS |
CAATTAGTCTTAATACCCTT+TGG | 0.368121 | 7_1:-66092529 | None:intergenic |
TGTATGCTTCACACCAAGTT+TGG | 0.370260 | 7_1:+66091899 | Msa1031440:five_prime_UTR |
TCCAACAACCCATCAGGAAT+TGG | 0.378181 | 7_1:+66093055 | Msa1031440:CDS |
AACAGAATCATCAGAAACTA+TGG | 0.378730 | 7_1:+66092859 | Msa1031440:CDS |
ATTTATTCAGTCTTCAACTA+AGG | 0.378998 | 7_1:-66093587 | None:intergenic |
TGTTTGTGCAGTTGGATGAT+TGG | 0.382209 | 7_1:+66092792 | Msa1031440:intron |
AGATCACAAGAGAACATTAT+TGG | 0.382269 | 7_1:+66092469 | Msa1031440:CDS |
AGTAGTCCATAGCATCTAAT+AGG | 0.386901 | 7_1:-66093003 | None:intergenic |
TTAATTTGTTTGTGTGTTGT+TGG | 0.390051 | 7_1:+66093667 | Msa1031440:three_prime_UTR |
GGGCAGCTGCTTCAGGGTAT+TGG | 0.391648 | 7_1:+66092392 | Msa1031440:CDS |
CATACTGTGAATTGATGTTA+GGG | 0.411622 | 7_1:-66093258 | None:intergenic |
ACCAATGTCATCATTAAGTA+AGG | 0.414843 | 7_1:+66093451 | Msa1031440:three_prime_UTR |
GTTTGTGCAGTTGGATGATT+GGG | 0.418531 | 7_1:+66092793 | Msa1031440:intron |
AATATCAACTTCAGCAATGA+TGG | 0.422653 | 7_1:-66092106 | None:intergenic |
CTTCATTTGGCGAGAAAGAA+TGG | 0.427536 | 7_1:+66092317 | Msa1031440:CDS |
TGTACACTACTATTTCTGAT+AGG | 0.428778 | 7_1:-66093639 | None:intergenic |
AGGAATTGAAGGAAGGGGTT+AGG | 0.439356 | 7_1:+66093537 | Msa1031440:three_prime_UTR |
TGTTTGTGTGTTGTTGGGGT+TGG | 0.440431 | 7_1:+66093673 | Msa1031440:three_prime_UTR |
CCTCATCTATGTTTGAAAGC+TGG | 0.441085 | 7_1:-66093189 | None:intergenic |
TCCAATTCCTGATGGGTTGT+TGG | 0.442082 | 7_1:-66093056 | None:intergenic |
TTCAAACCTATTAGATGCTA+TGG | 0.444967 | 7_1:+66092997 | Msa1031440:CDS |
ACATGGCAATGATGCCACTA+TGG | 0.444972 | 7_1:-66092437 | None:intergenic |
TGAAGTTGATATTTATAAGT+TGG | 0.446373 | 7_1:+66092116 | Msa1031440:CDS |
ACTTCAGCAATGATGGAAAC+AGG | 0.451615 | 7_1:-66092099 | None:intergenic |
GAAAATTCCAACAACCCATC+AGG | 0.469177 | 7_1:+66093049 | Msa1031440:CDS |
GAACTTGTTCCAATTCCTGA+TGG | 0.472125 | 7_1:-66093064 | None:intergenic |
AGCATCTAATAGGTTTGAAA+AGG | 0.474398 | 7_1:-66092993 | None:intergenic |
TATTTATAAGTTGGATCCAT+GGG | 0.475414 | 7_1:+66092125 | Msa1031440:CDS |
TCATCAAAGATTGCTTCATA+AGG | 0.476729 | 7_1:-66093288 | None:intergenic |
AACTCAAGTATTTCTTTGAT+GGG | 0.477999 | 7_1:-66093222 | None:intergenic |
CCACAGACCAATTTGCCACC+AGG | 0.478013 | 7_1:+66092003 | Msa1031440:CDS |
AACTTGTTCCAATTCCTGAT+GGG | 0.488918 | 7_1:-66093063 | None:intergenic |
ATATTTATAAGTTGGATCCA+TGG | 0.488986 | 7_1:+66092124 | Msa1031440:CDS |
AACTCATTCTTCACTACCTT+AGG | 0.494410 | 7_1:+66092052 | Msa1031440:CDS |
GGGTTAGGACCTATTTGGTA+TGG | 0.494857 | 7_1:+66093552 | Msa1031440:three_prime_UTR |
ATTGTTGCTAGTGTTGATTT+GGG | 0.495042 | 7_1:-66093125 | None:intergenic |
AGAAACTATGGTTGGTGAAG+TGG | 0.502853 | 7_1:+66092871 | Msa1031440:CDS |
CAAACAGGGCAGCTGCTTCA+GGG | 0.503732 | 7_1:+66092386 | Msa1031440:CDS |
AAGCTGGTGCTTTAAAGTGT+TGG | 0.507075 | 7_1:-66093173 | None:intergenic |
TTTGGGTACTTTCTATCTCT+AGG | 0.511526 | 7_1:-66092352 | None:intergenic |
TTAGTCTTAATACCCTTTGG+AGG | 0.513448 | 7_1:-66092526 | None:intergenic |
TACAAAGGAAAACCTCCAAA+GGG | 0.513769 | 7_1:+66092514 | Msa1031440:CDS |
TGCTTTAAAGTGTTGGATTG+AGG | 0.514061 | 7_1:-66093166 | None:intergenic |
CTGGTGGCAAATTGGTCTGT+GGG | 0.514571 | 7_1:-66092002 | None:intergenic |
AATTTGTTTGTGTGTTGTTG+GGG | 0.522454 | 7_1:+66093669 | Msa1031440:three_prime_UTR |
AGAGATAGAAAGTACCCAAA+TGG | 0.527590 | 7_1:+66092355 | Msa1031440:CDS |
GGTCCTCATCATCAATATCA+AGG | 0.532163 | 7_1:+66093328 | Msa1031440:CDS |
GCATCATTGCCATGTGGAGG+AGG | 0.534639 | 7_1:+66092445 | Msa1031440:CDS |
GCAATCTAAACTCACCCTCA+TGG | 0.537490 | 7_1:-66092611 | None:intergenic |
TTTCTAGGAATTGAAGGAAG+GGG | 0.543794 | 7_1:+66093532 | Msa1031440:three_prime_UTR |
TTGGATCCATGGGATTTACC+AGG | 0.553332 | 7_1:+66092135 | Msa1031440:CDS |
GATGGAAACAGGCAAGGGAA+TGG | 0.553802 | 7_1:-66092088 | None:intergenic |
TAGCCTTGATATTGATGATG+AGG | 0.557215 | 7_1:-66093331 | None:intergenic |
AGAATGAGTTCTGCATCAGT+AGG | 0.563104 | 7_1:-66092039 | None:intergenic |
TTACAAAGGAAAACCTCCAA+AGG | 0.565027 | 7_1:+66092513 | Msa1031440:CDS |
AGCAATGATGGAAACAGGCA+AGG | 0.566156 | 7_1:-66092094 | None:intergenic |
TCCTTACTTAATGATGACAT+TGG | 0.569887 | 7_1:-66093452 | None:intergenic |
TACAAACCTGGTAAATCCCA+TGG | 0.570239 | 7_1:-66092141 | None:intergenic |
TGTGATCTTCCTCCTCCACA+TGG | 0.570951 | 7_1:-66092454 | None:intergenic |
CACTGTTAAGCATACTGAAG+TGG | 0.572027 | 7_1:-66093813 | None:intergenic |
TCAGGGTATTGGAAAGCCAC+TGG | 0.577725 | 7_1:+66092403 | Msa1031440:CDS |
ATGACATTGGTGTAATTTGG+TGG | 0.584558 | 7_1:-66093439 | None:intergenic |
GCTCAAAGATTCTTCCATGA+GGG | 0.597300 | 7_1:+66092597 | Msa1031440:CDS |
AGATAAGAAGCTGCTCAACA+TGG | 0.598584 | 7_1:-66093026 | None:intergenic |
GAATGAGTTCTGCATCAGTA+GGG | 0.601787 | 7_1:-66092038 | None:intergenic |
CCTGGTGGCAAATTGGTCTG+TGG | 0.602988 | 7_1:-66092003 | None:intergenic |
GAATCATCAGAAACTATGGT+TGG | 0.606547 | 7_1:+66092863 | Msa1031440:CDS |
GGAAACAGGCAAGGGAATGG+AGG | 0.614063 | 7_1:-66092085 | None:intergenic |
GATGTTAGGGAAATTGCAAG+AGG | 0.615894 | 7_1:-66093245 | None:intergenic |
TATGGTCTTATCAGTGCCAG+TGG | 0.623985 | 7_1:-66092419 | None:intergenic |
TGAGTTCTGCATCAGTAGGG+TGG | 0.625467 | 7_1:-66092035 | None:intergenic |
GAAAGTACCCAAATGGTGCA+AGG | 0.625637 | 7_1:+66092362 | Msa1031440:CDS |
GCAATGATGGAAACAGGCAA+GGG | 0.627238 | 7_1:-66092093 | None:intergenic |
TGGTGGCAAATTGGTCTGTG+GGG | 0.627247 | 7_1:-66092001 | None:intergenic |
GTAGGGTGGAACCTAAAACC+TGG | 0.637724 | 7_1:-66092021 | None:intergenic |
AGCTCAAAGATTCTTCCATG+AGG | 0.640457 | 7_1:+66092596 | Msa1031440:CDS |
TGACATTGGTGTAATTTGGT+GGG | 0.643180 | 7_1:-66093438 | None:intergenic |
AAATGGTGCAAGGCCAAACA+GGG | 0.643288 | 7_1:+66092372 | Msa1031440:CDS |
GTGGCATCATTGCCATGTGG+AGG | 0.648100 | 7_1:+66092442 | Msa1031440:CDS |
CCAGCTTTCAAACATAGATG+AGG | 0.665846 | 7_1:+66093189 | Msa1031440:CDS |
TGGCACTGATAAGACCATAG+TGG | 0.666772 | 7_1:+66092423 | Msa1031440:CDS |
TGGTCTGTGGGGTTCCCATG+TGG | 0.676463 | 7_1:-66091990 | None:intergenic |
GGGTGGAACCTAAAACCTGG+TGG | 0.747301 | 7_1:-66092018 | None:intergenic |
ATAGTGGCATCATTGCCATG+TGG | 0.762428 | 7_1:+66092439 | Msa1031440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCATAATCTTTTTTTTTT+TGG | - | chr7_1:66093384-66093403 | None:intergenic | 10.0% |
!!! | TTTCATAATCTTTTTTTTTT+TGG | - | chr7_1:66093384-66093403 | None:intergenic | 10.0% |
!!! | AAAAGTACATACATATATTT+TGG | - | chr7_1:66092204-66092223 | None:intergenic | 15.0% |
!!! | ATTTTGATTTCTTGTAAATT+CGG | - | chr7_1:66092826-66092845 | None:intergenic | 15.0% |
!! | ATTCCTAGAAAAAATTAAAA+TGG | - | chr7_1:66093523-66093542 | None:intergenic | 15.0% |
!!! | AAAAGTACATACATATATTT+TGG | - | chr7_1:66092204-66092223 | None:intergenic | 15.0% |
!!! | ATTTTGATTTCTTGTAAATT+CGG | - | chr7_1:66092826-66092845 | None:intergenic | 15.0% |
!! | ATTCCTAGAAAAAATTAAAA+TGG | - | chr7_1:66093523-66093542 | None:intergenic | 15.0% |
!!! | TGAAGTTGATATTTATAAGT+TGG | + | chr7_1:66092116-66092135 | Msa1031440:CDS | 20.0% |
!! | AAATTTATAGAATACAAACC+TGG | - | chr7_1:66092156-66092175 | None:intergenic | 20.0% |
!! | AAAATTAATAATGTGTGATG+TGG | + | chr7_1:66092244-66092263 | Msa1031440:intron | 20.0% |
!!! | TGTCCATTTTAATTTTTTCT+AGG | + | chr7_1:66093517-66093536 | Msa1031440:three_prime_UTR | 20.0% |
!!! | TAATTTTTTCTAGGAATTGA+AGG | + | chr7_1:66093526-66093545 | Msa1031440:three_prime_UTR | 20.0% |
!!! | GATATTTTTCATTCTTTTCA+TGG | + | chr7_1:66093749-66093768 | Msa1031440:three_prime_UTR | 20.0% |
!!! | TGAAGTTGATATTTATAAGT+TGG | + | chr7_1:66092116-66092135 | Msa1031440:CDS | 20.0% |
!! | AAATTTATAGAATACAAACC+TGG | - | chr7_1:66092156-66092175 | None:intergenic | 20.0% |
!! | AAAATTAATAATGTGTGATG+TGG | + | chr7_1:66092244-66092263 | Msa1031440:intron | 20.0% |
!!! | TGTCCATTTTAATTTTTTCT+AGG | + | chr7_1:66093517-66093536 | Msa1031440:three_prime_UTR | 20.0% |
!!! | TAATTTTTTCTAGGAATTGA+AGG | + | chr7_1:66093526-66093545 | Msa1031440:three_prime_UTR | 20.0% |
!!! | GATATTTTTCATTCTTTTCA+TGG | + | chr7_1:66093749-66093768 | Msa1031440:three_prime_UTR | 20.0% |
!! | AACATTTTTCTAATACCACA+TGG | + | chr7_1:66091975-66091994 | Msa1031440:exon | 25.0% |
!! | ACATTTTTCTAATACCACAT+GGG | + | chr7_1:66091976-66091995 | Msa1031440:exon | 25.0% |
!! | ATATTTATAAGTTGGATCCA+TGG | + | chr7_1:66092124-66092143 | Msa1031440:CDS | 25.0% |
!! | TATTTATAAGTTGGATCCAT+GGG | + | chr7_1:66092125-66092144 | Msa1031440:CDS | 25.0% |
!!! | AATTTACTTTTGGTTTGTTG+TGG | + | chr7_1:66092273-66092292 | Msa1031440:intron | 25.0% |
! | TCTTAGACTAATGTTATTCT+TGG | + | chr7_1:66092761-66092780 | Msa1031440:intron | 25.0% |
! | AACTCAAGTATTTCTTTGAT+GGG | - | chr7_1:66093225-66093244 | None:intergenic | 25.0% |
!!! | ATGAATCAACAATTGCTTTT+AGG | + | chr7_1:66093307-66093326 | Msa1031440:CDS | 25.0% |
!!! | TCACTTAATTTGTGGTATTT+TGG | - | chr7_1:66093359-66093378 | None:intergenic | 25.0% |
!!! | TTTTGGTATCACTTAATTTG+TGG | - | chr7_1:66093367-66093386 | None:intergenic | 25.0% |
!! | TAAGTAAGATTTCTAGAAGT+TGG | + | chr7_1:66093414-66093433 | Msa1031440:three_prime_UTR | 25.0% |
! | ATTTATTCAGTCTTCAACTA+AGG | - | chr7_1:66093590-66093609 | None:intergenic | 25.0% |
!!! | TTAATTTGTTTGTGTGTTGT+TGG | + | chr7_1:66093667-66093686 | Msa1031440:three_prime_UTR | 25.0% |
!!! | TAATTTGTTTGTGTGTTGTT+GGG | + | chr7_1:66093668-66093687 | Msa1031440:three_prime_UTR | 25.0% |
!! | TTTCATTCTTTTCATGGAAA+AGG | + | chr7_1:66093755-66093774 | Msa1031440:three_prime_UTR | 25.0% |
!! | AACATTTTTCTAATACCACA+TGG | + | chr7_1:66091975-66091994 | Msa1031440:exon | 25.0% |
!! | ACATTTTTCTAATACCACAT+GGG | + | chr7_1:66091976-66091995 | Msa1031440:exon | 25.0% |
!! | ATATTTATAAGTTGGATCCA+TGG | + | chr7_1:66092124-66092143 | Msa1031440:CDS | 25.0% |
!! | TATTTATAAGTTGGATCCAT+GGG | + | chr7_1:66092125-66092144 | Msa1031440:CDS | 25.0% |
!!! | AATTTACTTTTGGTTTGTTG+TGG | + | chr7_1:66092273-66092292 | Msa1031440:intron | 25.0% |
! | TCTTAGACTAATGTTATTCT+TGG | + | chr7_1:66092761-66092780 | Msa1031440:intron | 25.0% |
! | AACTCAAGTATTTCTTTGAT+GGG | - | chr7_1:66093225-66093244 | None:intergenic | 25.0% |
!!! | ATGAATCAACAATTGCTTTT+AGG | + | chr7_1:66093307-66093326 | Msa1031440:CDS | 25.0% |
!!! | TCACTTAATTTGTGGTATTT+TGG | - | chr7_1:66093359-66093378 | None:intergenic | 25.0% |
!!! | TTTTGGTATCACTTAATTTG+TGG | - | chr7_1:66093367-66093386 | None:intergenic | 25.0% |
!! | TAAGTAAGATTTCTAGAAGT+TGG | + | chr7_1:66093414-66093433 | Msa1031440:three_prime_UTR | 25.0% |
! | ATTTATTCAGTCTTCAACTA+AGG | - | chr7_1:66093590-66093609 | None:intergenic | 25.0% |
!!! | TTAATTTGTTTGTGTGTTGT+TGG | + | chr7_1:66093667-66093686 | Msa1031440:three_prime_UTR | 25.0% |
!!! | TAATTTGTTTGTGTGTTGTT+GGG | + | chr7_1:66093668-66093687 | Msa1031440:three_prime_UTR | 25.0% |
!! | TTTCATTCTTTTCATGGAAA+AGG | + | chr7_1:66093755-66093774 | Msa1031440:three_prime_UTR | 25.0% |
! | TAGAAAAATGTTGAGGTGTT+TGG | - | chr7_1:66091967-66091986 | None:intergenic | 30.0% |
GTGGTATTAGAAAAATGTTG+AGG | - | chr7_1:66091974-66091993 | None:intergenic | 30.0% | |
AATATCAACTTCAGCAATGA+TGG | - | chr7_1:66092109-66092128 | None:intergenic | 30.0% | |
TTAATAATGTGTGATGTGGA+AGG | + | chr7_1:66092248-66092267 | Msa1031440:intron | 30.0% | |
! | GTGGAAGGTTAATTTACTTT+TGG | + | chr7_1:66092263-66092282 | Msa1031440:intron | 30.0% |
! | TTTTCAGCTAAAGCTTCATT+TGG | + | chr7_1:66092304-66092323 | Msa1031440:intron | 30.0% |
AGATCACAAGAGAACATTAT+TGG | + | chr7_1:66092469-66092488 | Msa1031440:CDS | 30.0% | |
!! | GAACATTATTGGTGTCAAAA+AGG | + | chr7_1:66092480-66092499 | Msa1031440:CDS | 30.0% |
!!! | AAGGCTCTTGTTTTTTACAA+AGG | + | chr7_1:66092499-66092518 | Msa1031440:CDS | 30.0% |
!! | CAATTAGTCTTAATACCCTT+TGG | - | chr7_1:66092532-66092551 | None:intergenic | 30.0% |
!! | CAAAGGGTATTAAGACTAAT+TGG | + | chr7_1:66092530-66092549 | Msa1031440:CDS | 30.0% |
GAAGAATCTTTGAGCTTAAT+AGG | - | chr7_1:66092592-66092611 | None:intergenic | 30.0% | |
AATTATTGTGTTTGTGCAGT+TGG | + | chr7_1:66092784-66092803 | Msa1031440:intron | 30.0% | |
AACAGAATCATCAGAAACTA+TGG | + | chr7_1:66092859-66092878 | Msa1031440:CDS | 30.0% | |
!!! | GTTTTTGGTGATTGGAAAAA+GGG | - | chr7_1:66092927-66092946 | None:intergenic | 30.0% |
!!! | TGTTTTTGGTGATTGGAAAA+AGG | - | chr7_1:66092928-66092947 | None:intergenic | 30.0% |
AGCATCTAATAGGTTTGAAA+AGG | - | chr7_1:66092996-66093015 | None:intergenic | 30.0% | |
TTCAAACCTATTAGATGCTA+TGG | + | chr7_1:66092997-66093016 | Msa1031440:CDS | 30.0% | |
!! | ATTGTTGCTAGTGTTGATTT+GGG | - | chr7_1:66093128-66093147 | None:intergenic | 30.0% |
!! | AATTGTTGCTAGTGTTGATT+TGG | - | chr7_1:66093129-66093148 | None:intergenic | 30.0% |
GAACTCAAGTATTTCTTTGA+TGG | - | chr7_1:66093226-66093245 | None:intergenic | 30.0% | |
CATACTGTGAATTGATGTTA+GGG | - | chr7_1:66093261-66093280 | None:intergenic | 30.0% | |
TCATACTGTGAATTGATGTT+AGG | - | chr7_1:66093262-66093281 | None:intergenic | 30.0% | |
TCATCAAAGATTGCTTCATA+AGG | - | chr7_1:66093291-66093310 | None:intergenic | 30.0% | |
ATGATGACATTGGTGTAATT+TGG | - | chr7_1:66093445-66093464 | None:intergenic | 30.0% | |
ACCAATGTCATCATTAAGTA+AGG | + | chr7_1:66093451-66093470 | Msa1031440:three_prime_UTR | 30.0% | |
TCCTTACTTAATGATGACAT+TGG | - | chr7_1:66093455-66093474 | None:intergenic | 30.0% | |
!! | TTTTTCTAGGAATTGAAGGA+AGG | + | chr7_1:66093530-66093549 | Msa1031440:three_prime_UTR | 30.0% |
!! | TTTTCTAGGAATTGAAGGAA+GGG | + | chr7_1:66093531-66093550 | Msa1031440:three_prime_UTR | 30.0% |
!! | TGTACACTACTATTTCTGAT+AGG | - | chr7_1:66093642-66093661 | None:intergenic | 30.0% |
! | AATTTGTTTGTGTGTTGTTG+GGG | + | chr7_1:66093669-66093688 | Msa1031440:three_prime_UTR | 30.0% |
! | GGAAGCTACAAAATTTTCTT+TGG | + | chr7_1:66093776-66093795 | Msa1031440:three_prime_UTR | 30.0% |
! | TAGAAAAATGTTGAGGTGTT+TGG | - | chr7_1:66091967-66091986 | None:intergenic | 30.0% |
GTGGTATTAGAAAAATGTTG+AGG | - | chr7_1:66091974-66091993 | None:intergenic | 30.0% | |
AATATCAACTTCAGCAATGA+TGG | - | chr7_1:66092109-66092128 | None:intergenic | 30.0% | |
TTAATAATGTGTGATGTGGA+AGG | + | chr7_1:66092248-66092267 | Msa1031440:intron | 30.0% | |
! | GTGGAAGGTTAATTTACTTT+TGG | + | chr7_1:66092263-66092282 | Msa1031440:intron | 30.0% |
! | TTTTCAGCTAAAGCTTCATT+TGG | + | chr7_1:66092304-66092323 | Msa1031440:intron | 30.0% |
AGATCACAAGAGAACATTAT+TGG | + | chr7_1:66092469-66092488 | Msa1031440:CDS | 30.0% | |
!! | GAACATTATTGGTGTCAAAA+AGG | + | chr7_1:66092480-66092499 | Msa1031440:CDS | 30.0% |
!!! | AAGGCTCTTGTTTTTTACAA+AGG | + | chr7_1:66092499-66092518 | Msa1031440:CDS | 30.0% |
!! | CAATTAGTCTTAATACCCTT+TGG | - | chr7_1:66092532-66092551 | None:intergenic | 30.0% |
!! | CAAAGGGTATTAAGACTAAT+TGG | + | chr7_1:66092530-66092549 | Msa1031440:CDS | 30.0% |
GAAGAATCTTTGAGCTTAAT+AGG | - | chr7_1:66092592-66092611 | None:intergenic | 30.0% | |
AATTATTGTGTTTGTGCAGT+TGG | + | chr7_1:66092784-66092803 | Msa1031440:intron | 30.0% | |
AACAGAATCATCAGAAACTA+TGG | + | chr7_1:66092859-66092878 | Msa1031440:CDS | 30.0% | |
!!! | GTTTTTGGTGATTGGAAAAA+GGG | - | chr7_1:66092927-66092946 | None:intergenic | 30.0% |
!!! | TGTTTTTGGTGATTGGAAAA+AGG | - | chr7_1:66092928-66092947 | None:intergenic | 30.0% |
AGCATCTAATAGGTTTGAAA+AGG | - | chr7_1:66092996-66093015 | None:intergenic | 30.0% | |
TTCAAACCTATTAGATGCTA+TGG | + | chr7_1:66092997-66093016 | Msa1031440:CDS | 30.0% | |
!! | ATTGTTGCTAGTGTTGATTT+GGG | - | chr7_1:66093128-66093147 | None:intergenic | 30.0% |
!! | AATTGTTGCTAGTGTTGATT+TGG | - | chr7_1:66093129-66093148 | None:intergenic | 30.0% |
GAACTCAAGTATTTCTTTGA+TGG | - | chr7_1:66093226-66093245 | None:intergenic | 30.0% | |
CATACTGTGAATTGATGTTA+GGG | - | chr7_1:66093261-66093280 | None:intergenic | 30.0% | |
TCATACTGTGAATTGATGTT+AGG | - | chr7_1:66093262-66093281 | None:intergenic | 30.0% | |
TCATCAAAGATTGCTTCATA+AGG | - | chr7_1:66093291-66093310 | None:intergenic | 30.0% | |
ATGATGACATTGGTGTAATT+TGG | - | chr7_1:66093445-66093464 | None:intergenic | 30.0% | |
ACCAATGTCATCATTAAGTA+AGG | + | chr7_1:66093451-66093470 | Msa1031440:three_prime_UTR | 30.0% | |
TCCTTACTTAATGATGACAT+TGG | - | chr7_1:66093455-66093474 | None:intergenic | 30.0% | |
!! | TTTTTCTAGGAATTGAAGGA+AGG | + | chr7_1:66093530-66093549 | Msa1031440:three_prime_UTR | 30.0% |
!! | TTTTCTAGGAATTGAAGGAA+GGG | + | chr7_1:66093531-66093550 | Msa1031440:three_prime_UTR | 30.0% |
!! | TGTACACTACTATTTCTGAT+AGG | - | chr7_1:66093642-66093661 | None:intergenic | 30.0% |
! | AATTTGTTTGTGTGTTGTTG+GGG | + | chr7_1:66093669-66093688 | Msa1031440:three_prime_UTR | 30.0% |
! | GGAAGCTACAAAATTTTCTT+TGG | + | chr7_1:66093776-66093795 | Msa1031440:three_prime_UTR | 30.0% |
AGAGAGACAAAAACCAAACT+TGG | - | chr7_1:66091915-66091934 | None:intergenic | 35.0% | |
AACTCATTCTTCACTACCTT+AGG | + | chr7_1:66092052-66092071 | Msa1031440:CDS | 35.0% | |
!!! | TGGAGGCAATTTTTTTCCTA+AGG | - | chr7_1:66092071-66092090 | None:intergenic | 35.0% |
TTTGGGTACTTTCTATCTCT+AGG | - | chr7_1:66092355-66092374 | None:intergenic | 35.0% | |
!! | AGAGATAGAAAGTACCCAAA+TGG | + | chr7_1:66092355-66092374 | Msa1031440:CDS | 35.0% |
TTACAAAGGAAAACCTCCAA+AGG | + | chr7_1:66092513-66092532 | Msa1031440:CDS | 35.0% | |
TACAAAGGAAAACCTCCAAA+GGG | + | chr7_1:66092514-66092533 | Msa1031440:CDS | 35.0% | |
!! | TTAGTCTTAATACCCTTTGG+AGG | - | chr7_1:66092529-66092548 | None:intergenic | 35.0% |
TTGATGTCTTTGTTCGATTG+TGG | - | chr7_1:66092686-66092705 | None:intergenic | 35.0% | |
GAATCATCAGAAACTATGGT+TGG | + | chr7_1:66092863-66092882 | Msa1031440:CDS | 35.0% | |
TGATTGGAAAAAGGGTTTCT+TGG | - | chr7_1:66092919-66092938 | None:intergenic | 35.0% | |
!!! | GATGTTGTGTTTTTGGTGAT+TGG | - | chr7_1:66092935-66092954 | None:intergenic | 35.0% |
! | AAGAGGTGATGTTGTGTTTT+TGG | - | chr7_1:66092942-66092961 | None:intergenic | 35.0% |
AGTAGTCCATAGCATCTAAT+AGG | - | chr7_1:66093006-66093025 | None:intergenic | 35.0% | |
! | AACTTGTTCCAATTCCTGAT+GGG | - | chr7_1:66093066-66093085 | None:intergenic | 35.0% |
!! | TGCTTTAAAGTGTTGGATTG+AGG | - | chr7_1:66093169-66093188 | None:intergenic | 35.0% |
!! | TAGCCTTGATATTGATGATG+AGG | - | chr7_1:66093334-66093353 | None:intergenic | 35.0% |
TGACATTGGTGTAATTTGGT+GGG | - | chr7_1:66093441-66093460 | None:intergenic | 35.0% | |
ATGACATTGGTGTAATTTGG+TGG | - | chr7_1:66093442-66093461 | None:intergenic | 35.0% | |
! | TTTCTAGGAATTGAAGGAAG+GGG | + | chr7_1:66093532-66093551 | Msa1031440:three_prime_UTR | 35.0% |
!! | CTTTTGACTCCATACCAAAT+AGG | - | chr7_1:66093564-66093583 | None:intergenic | 35.0% |
AGAGAGACAAAAACCAAACT+TGG | - | chr7_1:66091915-66091934 | None:intergenic | 35.0% | |
AACTCATTCTTCACTACCTT+AGG | + | chr7_1:66092052-66092071 | Msa1031440:CDS | 35.0% | |
!!! | TGGAGGCAATTTTTTTCCTA+AGG | - | chr7_1:66092071-66092090 | None:intergenic | 35.0% |
TTTGGGTACTTTCTATCTCT+AGG | - | chr7_1:66092355-66092374 | None:intergenic | 35.0% | |
!! | AGAGATAGAAAGTACCCAAA+TGG | + | chr7_1:66092355-66092374 | Msa1031440:CDS | 35.0% |
TTACAAAGGAAAACCTCCAA+AGG | + | chr7_1:66092513-66092532 | Msa1031440:CDS | 35.0% | |
TACAAAGGAAAACCTCCAAA+GGG | + | chr7_1:66092514-66092533 | Msa1031440:CDS | 35.0% | |
!! | TTAGTCTTAATACCCTTTGG+AGG | - | chr7_1:66092529-66092548 | None:intergenic | 35.0% |
TTGATGTCTTTGTTCGATTG+TGG | - | chr7_1:66092686-66092705 | None:intergenic | 35.0% | |
GAATCATCAGAAACTATGGT+TGG | + | chr7_1:66092863-66092882 | Msa1031440:CDS | 35.0% | |
TGATTGGAAAAAGGGTTTCT+TGG | - | chr7_1:66092919-66092938 | None:intergenic | 35.0% | |
!!! | GATGTTGTGTTTTTGGTGAT+TGG | - | chr7_1:66092935-66092954 | None:intergenic | 35.0% |
! | AAGAGGTGATGTTGTGTTTT+TGG | - | chr7_1:66092942-66092961 | None:intergenic | 35.0% |
AGTAGTCCATAGCATCTAAT+AGG | - | chr7_1:66093006-66093025 | None:intergenic | 35.0% | |
! | AACTTGTTCCAATTCCTGAT+GGG | - | chr7_1:66093066-66093085 | None:intergenic | 35.0% |
!! | TGCTTTAAAGTGTTGGATTG+AGG | - | chr7_1:66093169-66093188 | None:intergenic | 35.0% |
!! | TAGCCTTGATATTGATGATG+AGG | - | chr7_1:66093334-66093353 | None:intergenic | 35.0% |
TGACATTGGTGTAATTTGGT+GGG | - | chr7_1:66093441-66093460 | None:intergenic | 35.0% | |
ATGACATTGGTGTAATTTGG+TGG | - | chr7_1:66093442-66093461 | None:intergenic | 35.0% | |
! | TTTCTAGGAATTGAAGGAAG+GGG | + | chr7_1:66093532-66093551 | Msa1031440:three_prime_UTR | 35.0% |
!! | CTTTTGACTCCATACCAAAT+AGG | - | chr7_1:66093564-66093583 | None:intergenic | 35.0% |
TGTATGCTTCACACCAAGTT+TGG | + | chr7_1:66091899-66091918 | Msa1031440:five_prime_UTR | 40.0% | |
GAATGAGTTCTGCATCAGTA+GGG | - | chr7_1:66092041-66092060 | None:intergenic | 40.0% | |
AGAATGAGTTCTGCATCAGT+AGG | - | chr7_1:66092042-66092061 | None:intergenic | 40.0% | |
! | ACTTCAGCAATGATGGAAAC+AGG | - | chr7_1:66092102-66092121 | None:intergenic | 40.0% |
TACAAACCTGGTAAATCCCA+TGG | - | chr7_1:66092144-66092163 | None:intergenic | 40.0% | |
CTTCATTTGGCGAGAAAGAA+TGG | + | chr7_1:66092317-66092336 | Msa1031440:CDS | 40.0% | |
AGCTCAAAGATTCTTCCATG+AGG | + | chr7_1:66092596-66092615 | Msa1031440:CDS | 40.0% | |
GCTCAAAGATTCTTCCATGA+GGG | + | chr7_1:66092597-66092616 | Msa1031440:CDS | 40.0% | |
ATGAGGGTGAGTTTAGATTG+CGG | + | chr7_1:66092613-66092632 | Msa1031440:intron | 40.0% | |
TTGATGTAGTTGTTCGACTG+TGG | + | chr7_1:66092717-66092736 | Msa1031440:intron | 40.0% | |
TGTTTGTGCAGTTGGATGAT+TGG | + | chr7_1:66092792-66092811 | Msa1031440:intron | 40.0% | |
GTTTGTGCAGTTGGATGATT+GGG | + | chr7_1:66092793-66092812 | Msa1031440:intron | 40.0% | |
!! | AGAAACTATGGTTGGTGAAG+TGG | + | chr7_1:66092871-66092890 | Msa1031440:CDS | 40.0% |
!!! | GACATGAGTGTGTTTTGAAG+AGG | - | chr7_1:66092959-66092978 | None:intergenic | 40.0% |
AGATAAGAAGCTGCTCAACA+TGG | - | chr7_1:66093029-66093048 | None:intergenic | 40.0% | |
GAAAATTCCAACAACCCATC+AGG | + | chr7_1:66093049-66093068 | Msa1031440:CDS | 40.0% | |
! | GAACTTGTTCCAATTCCTGA+TGG | - | chr7_1:66093067-66093086 | None:intergenic | 40.0% |
TCAGGAATTGGAACAAGTTC+AGG | + | chr7_1:66093067-66093086 | Msa1031440:CDS | 40.0% | |
!! | AAGCTGGTGCTTTAAAGTGT+TGG | - | chr7_1:66093176-66093195 | None:intergenic | 40.0% |
CCTCATCTATGTTTGAAAGC+TGG | - | chr7_1:66093192-66093211 | None:intergenic | 40.0% | |
CCAGCTTTCAAACATAGATG+AGG | + | chr7_1:66093189-66093208 | Msa1031440:CDS | 40.0% | |
GATGTTAGGGAAATTGCAAG+AGG | - | chr7_1:66093248-66093267 | None:intergenic | 40.0% | |
GGTCCTCATCATCAATATCA+AGG | + | chr7_1:66093328-66093347 | Msa1031440:CDS | 40.0% | |
CACTGTTAAGCATACTGAAG+TGG | - | chr7_1:66093816-66093835 | None:intergenic | 40.0% | |
TGTATGCTTCACACCAAGTT+TGG | + | chr7_1:66091899-66091918 | Msa1031440:five_prime_UTR | 40.0% | |
GAATGAGTTCTGCATCAGTA+GGG | - | chr7_1:66092041-66092060 | None:intergenic | 40.0% | |
AGAATGAGTTCTGCATCAGT+AGG | - | chr7_1:66092042-66092061 | None:intergenic | 40.0% | |
! | ACTTCAGCAATGATGGAAAC+AGG | - | chr7_1:66092102-66092121 | None:intergenic | 40.0% |
TACAAACCTGGTAAATCCCA+TGG | - | chr7_1:66092144-66092163 | None:intergenic | 40.0% | |
CTTCATTTGGCGAGAAAGAA+TGG | + | chr7_1:66092317-66092336 | Msa1031440:CDS | 40.0% | |
AGCTCAAAGATTCTTCCATG+AGG | + | chr7_1:66092596-66092615 | Msa1031440:CDS | 40.0% | |
GCTCAAAGATTCTTCCATGA+GGG | + | chr7_1:66092597-66092616 | Msa1031440:CDS | 40.0% | |
ATGAGGGTGAGTTTAGATTG+CGG | + | chr7_1:66092613-66092632 | Msa1031440:intron | 40.0% | |
TTGATGTAGTTGTTCGACTG+TGG | + | chr7_1:66092717-66092736 | Msa1031440:intron | 40.0% | |
TGTTTGTGCAGTTGGATGAT+TGG | + | chr7_1:66092792-66092811 | Msa1031440:intron | 40.0% | |
GTTTGTGCAGTTGGATGATT+GGG | + | chr7_1:66092793-66092812 | Msa1031440:intron | 40.0% | |
!! | AGAAACTATGGTTGGTGAAG+TGG | + | chr7_1:66092871-66092890 | Msa1031440:CDS | 40.0% |
!!! | GACATGAGTGTGTTTTGAAG+AGG | - | chr7_1:66092959-66092978 | None:intergenic | 40.0% |
AGATAAGAAGCTGCTCAACA+TGG | - | chr7_1:66093029-66093048 | None:intergenic | 40.0% | |
GAAAATTCCAACAACCCATC+AGG | + | chr7_1:66093049-66093068 | Msa1031440:CDS | 40.0% | |
! | GAACTTGTTCCAATTCCTGA+TGG | - | chr7_1:66093067-66093086 | None:intergenic | 40.0% |
TCAGGAATTGGAACAAGTTC+AGG | + | chr7_1:66093067-66093086 | Msa1031440:CDS | 40.0% | |
!! | AAGCTGGTGCTTTAAAGTGT+TGG | - | chr7_1:66093176-66093195 | None:intergenic | 40.0% |
CCTCATCTATGTTTGAAAGC+TGG | - | chr7_1:66093192-66093211 | None:intergenic | 40.0% | |
CCAGCTTTCAAACATAGATG+AGG | + | chr7_1:66093189-66093208 | Msa1031440:CDS | 40.0% | |
GATGTTAGGGAAATTGCAAG+AGG | - | chr7_1:66093248-66093267 | None:intergenic | 40.0% | |
GGTCCTCATCATCAATATCA+AGG | + | chr7_1:66093328-66093347 | Msa1031440:CDS | 40.0% | |
CACTGTTAAGCATACTGAAG+TGG | - | chr7_1:66093816-66093835 | None:intergenic | 40.0% | |
CCTAAAACCTGGTGGCAAAT+TGG | - | chr7_1:66092013-66092032 | None:intergenic | 45.0% | |
! | CCAATTTGCCACCAGGTTTT+AGG | + | chr7_1:66092010-66092029 | Msa1031440:CDS | 45.0% |
! | GCAATGATGGAAACAGGCAA+GGG | - | chr7_1:66092096-66092115 | None:intergenic | 45.0% |
! | AGCAATGATGGAAACAGGCA+AGG | - | chr7_1:66092097-66092116 | None:intergenic | 45.0% |
TTGGATCCATGGGATTTACC+AGG | + | chr7_1:66092135-66092154 | Msa1031440:CDS | 45.0% | |
!! | GAAAGTACCCAAATGGTGCA+AGG | + | chr7_1:66092362-66092381 | Msa1031440:CDS | 45.0% |
!! | TGTTTGGCCTTGCACCATTT+GGG | - | chr7_1:66092372-66092391 | None:intergenic | 45.0% |
AAATGGTGCAAGGCCAAACA+GGG | + | chr7_1:66092372-66092391 | Msa1031440:CDS | 45.0% | |
!! | TATGGTCTTATCAGTGCCAG+TGG | - | chr7_1:66092422-66092441 | None:intergenic | 45.0% |
!! | TGGCACTGATAAGACCATAG+TGG | + | chr7_1:66092423-66092442 | Msa1031440:CDS | 45.0% |
ACATGGCAATGATGCCACTA+TGG | - | chr7_1:66092440-66092459 | None:intergenic | 45.0% | |
ATAGTGGCATCATTGCCATG+TGG | + | chr7_1:66092439-66092458 | Msa1031440:CDS | 45.0% | |
GCAATCTAAACTCACCCTCA+TGG | - | chr7_1:66092614-66092633 | None:intergenic | 45.0% | |
GTTCGATTGTGGCAAGACTA+TGG | - | chr7_1:66092675-66092694 | None:intergenic | 45.0% | |
TCCAACAACCCATCAGGAAT+TGG | + | chr7_1:66093055-66093074 | Msa1031440:CDS | 45.0% | |
!! | TCCAATTCCTGATGGGTTGT+TGG | - | chr7_1:66093059-66093078 | None:intergenic | 45.0% |
AGGAATTGAAGGAAGGGGTT+AGG | + | chr7_1:66093537-66093556 | Msa1031440:three_prime_UTR | 45.0% | |
GGGTTAGGACCTATTTGGTA+TGG | + | chr7_1:66093552-66093571 | Msa1031440:three_prime_UTR | 45.0% | |
! | TGTTTGTGTGTTGTTGGGGT+TGG | + | chr7_1:66093673-66093692 | Msa1031440:three_prime_UTR | 45.0% |
CCTAAAACCTGGTGGCAAAT+TGG | - | chr7_1:66092013-66092032 | None:intergenic | 45.0% | |
! | CCAATTTGCCACCAGGTTTT+AGG | + | chr7_1:66092010-66092029 | Msa1031440:CDS | 45.0% |
! | GCAATGATGGAAACAGGCAA+GGG | - | chr7_1:66092096-66092115 | None:intergenic | 45.0% |
! | AGCAATGATGGAAACAGGCA+AGG | - | chr7_1:66092097-66092116 | None:intergenic | 45.0% |
TTGGATCCATGGGATTTACC+AGG | + | chr7_1:66092135-66092154 | Msa1031440:CDS | 45.0% | |
!! | GAAAGTACCCAAATGGTGCA+AGG | + | chr7_1:66092362-66092381 | Msa1031440:CDS | 45.0% |
!! | TGTTTGGCCTTGCACCATTT+GGG | - | chr7_1:66092372-66092391 | None:intergenic | 45.0% |
AAATGGTGCAAGGCCAAACA+GGG | + | chr7_1:66092372-66092391 | Msa1031440:CDS | 45.0% | |
!! | TATGGTCTTATCAGTGCCAG+TGG | - | chr7_1:66092422-66092441 | None:intergenic | 45.0% |
!! | TGGCACTGATAAGACCATAG+TGG | + | chr7_1:66092423-66092442 | Msa1031440:CDS | 45.0% |
ACATGGCAATGATGCCACTA+TGG | - | chr7_1:66092440-66092459 | None:intergenic | 45.0% | |
ATAGTGGCATCATTGCCATG+TGG | + | chr7_1:66092439-66092458 | Msa1031440:CDS | 45.0% | |
GCAATCTAAACTCACCCTCA+TGG | - | chr7_1:66092614-66092633 | None:intergenic | 45.0% | |
GTTCGATTGTGGCAAGACTA+TGG | - | chr7_1:66092675-66092694 | None:intergenic | 45.0% | |
TCCAACAACCCATCAGGAAT+TGG | + | chr7_1:66093055-66093074 | Msa1031440:CDS | 45.0% | |
!! | TCCAATTCCTGATGGGTTGT+TGG | - | chr7_1:66093059-66093078 | None:intergenic | 45.0% |
AGGAATTGAAGGAAGGGGTT+AGG | + | chr7_1:66093537-66093556 | Msa1031440:three_prime_UTR | 45.0% | |
GGGTTAGGACCTATTTGGTA+TGG | + | chr7_1:66093552-66093571 | Msa1031440:three_prime_UTR | 45.0% | |
! | TGTTTGTGTGTTGTTGGGGT+TGG | + | chr7_1:66093673-66093692 | Msa1031440:three_prime_UTR | 45.0% |
!! | TTCTATAAATTTAAATTTAA+AGG | + | chr7_1:66092164-66092183 | Msa1031440:intron | 5.0% |
!! | TTCTATAAATTTAAATTTAA+AGG | + | chr7_1:66092164-66092183 | Msa1031440:intron | 5.0% |
! | TGGTGGCAAATTGGTCTGTG+GGG | - | chr7_1:66092004-66092023 | None:intergenic | 50.0% |
! | CTGGTGGCAAATTGGTCTGT+GGG | - | chr7_1:66092005-66092024 | None:intergenic | 50.0% |
GTAGGGTGGAACCTAAAACC+TGG | - | chr7_1:66092024-66092043 | None:intergenic | 50.0% | |
TGAGTTCTGCATCAGTAGGG+TGG | - | chr7_1:66092038-66092057 | None:intergenic | 50.0% | |
GATGGAAACAGGCAAGGGAA+TGG | - | chr7_1:66092091-66092110 | None:intergenic | 50.0% | |
!! | CTGTTTGGCCTTGCACCATT+TGG | - | chr7_1:66092373-66092392 | None:intergenic | 50.0% |
CAAATGGTGCAAGGCCAAAC+AGG | + | chr7_1:66092371-66092390 | Msa1031440:CDS | 50.0% | |
!! | TCAGGGTATTGGAAAGCCAC+TGG | + | chr7_1:66092403-66092422 | Msa1031440:CDS | 50.0% |
TGTGATCTTCCTCCTCCACA+TGG | - | chr7_1:66092457-66092476 | None:intergenic | 50.0% | |
GGAAGGGGTTAGGACCTATT+TGG | + | chr7_1:66093547-66093566 | Msa1031440:three_prime_UTR | 50.0% | |
! | TGGTGGCAAATTGGTCTGTG+GGG | - | chr7_1:66092004-66092023 | None:intergenic | 50.0% |
! | CTGGTGGCAAATTGGTCTGT+GGG | - | chr7_1:66092005-66092024 | None:intergenic | 50.0% |
GTAGGGTGGAACCTAAAACC+TGG | - | chr7_1:66092024-66092043 | None:intergenic | 50.0% | |
TGAGTTCTGCATCAGTAGGG+TGG | - | chr7_1:66092038-66092057 | None:intergenic | 50.0% | |
GATGGAAACAGGCAAGGGAA+TGG | - | chr7_1:66092091-66092110 | None:intergenic | 50.0% | |
!! | CTGTTTGGCCTTGCACCATT+TGG | - | chr7_1:66092373-66092392 | None:intergenic | 50.0% |
CAAATGGTGCAAGGCCAAAC+AGG | + | chr7_1:66092371-66092390 | Msa1031440:CDS | 50.0% | |
!! | TCAGGGTATTGGAAAGCCAC+TGG | + | chr7_1:66092403-66092422 | Msa1031440:CDS | 50.0% |
TGTGATCTTCCTCCTCCACA+TGG | - | chr7_1:66092457-66092476 | None:intergenic | 50.0% | |
GGAAGGGGTTAGGACCTATT+TGG | + | chr7_1:66093547-66093566 | Msa1031440:three_prime_UTR | 50.0% | |
! | CCTGGTGGCAAATTGGTCTG+TGG | - | chr7_1:66092006-66092025 | None:intergenic | 55.0% |
CCACAGACCAATTTGCCACC+AGG | + | chr7_1:66092003-66092022 | Msa1031440:CDS | 55.0% | |
GGGTGGAACCTAAAACCTGG+TGG | - | chr7_1:66092021-66092040 | None:intergenic | 55.0% | |
GGAAACAGGCAAGGGAATGG+AGG | - | chr7_1:66092088-66092107 | None:intergenic | 55.0% | |
CAAACAGGGCAGCTGCTTCA+GGG | + | chr7_1:66092386-66092405 | Msa1031440:CDS | 55.0% | |
GTGGCATCATTGCCATGTGG+AGG | + | chr7_1:66092442-66092461 | Msa1031440:CDS | 55.0% | |
GCATCATTGCCATGTGGAGG+AGG | + | chr7_1:66092445-66092464 | Msa1031440:CDS | 55.0% | |
! | CCTGGTGGCAAATTGGTCTG+TGG | - | chr7_1:66092006-66092025 | None:intergenic | 55.0% |
CCACAGACCAATTTGCCACC+AGG | + | chr7_1:66092003-66092022 | Msa1031440:CDS | 55.0% | |
GGGTGGAACCTAAAACCTGG+TGG | - | chr7_1:66092021-66092040 | None:intergenic | 55.0% | |
GGAAACAGGCAAGGGAATGG+AGG | - | chr7_1:66092088-66092107 | None:intergenic | 55.0% | |
CAAACAGGGCAGCTGCTTCA+GGG | + | chr7_1:66092386-66092405 | Msa1031440:CDS | 55.0% | |
GTGGCATCATTGCCATGTGG+AGG | + | chr7_1:66092442-66092461 | Msa1031440:CDS | 55.0% | |
GCATCATTGCCATGTGGAGG+AGG | + | chr7_1:66092445-66092464 | Msa1031440:CDS | 55.0% | |
TGGTCTGTGGGGTTCCCATG+TGG | - | chr7_1:66091993-66092012 | None:intergenic | 60.0% | |
CCTGAAGCAGCTGCCCTGTT+TGG | - | chr7_1:66092388-66092407 | None:intergenic | 60.0% | |
CCAAACAGGGCAGCTGCTTC+AGG | + | chr7_1:66092385-66092404 | Msa1031440:CDS | 60.0% | |
GGGCAGCTGCTTCAGGGTAT+TGG | + | chr7_1:66092392-66092411 | Msa1031440:CDS | 60.0% | |
TGGTCTGTGGGGTTCCCATG+TGG | - | chr7_1:66091993-66092012 | None:intergenic | 60.0% | |
CCTGAAGCAGCTGCCCTGTT+TGG | - | chr7_1:66092388-66092407 | None:intergenic | 60.0% | |
CCAAACAGGGCAGCTGCTTC+AGG | + | chr7_1:66092385-66092404 | Msa1031440:CDS | 60.0% | |
GGGCAGCTGCTTCAGGGTAT+TGG | + | chr7_1:66092392-66092411 | Msa1031440:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 66091898 | 66093854 | 66091898 | ID=Msa1031440;Name=Msa1031440 |
chr7_1 | mRNA | 66091898 | 66093854 | 66091898 | ID=Msa1031440-mRNA-1;Parent=Msa1031440;Name=Msa1031440-mRNA-1;_AED=0.03;_eAED=0.03;_QI=96|1|1|1|1|1|3|500|340 |
chr7_1 | exon | 66091898 | 66092156 | 66091898 | ID=Msa1031440-mRNA-1:exon:14782;Parent=Msa1031440-mRNA-1 |
chr7_1 | exon | 66092311 | 66092618 | 66092311 | ID=Msa1031440-mRNA-1:exon:14783;Parent=Msa1031440-mRNA-1 |
chr7_1 | exon | 66092803 | 66093854 | 66092803 | ID=Msa1031440-mRNA-1:exon:14784;Parent=Msa1031440-mRNA-1 |
chr7_1 | five_prime_UTR | 66091898 | 66091993 | 66091898 | ID=Msa1031440-mRNA-1:five_prime_utr;Parent=Msa1031440-mRNA-1 |
chr7_1 | CDS | 66091994 | 66092156 | 66091994 | ID=Msa1031440-mRNA-1:cds;Parent=Msa1031440-mRNA-1 |
chr7_1 | CDS | 66092311 | 66092618 | 66092311 | ID=Msa1031440-mRNA-1:cds;Parent=Msa1031440-mRNA-1 |
chr7_1 | CDS | 66092803 | 66093354 | 66092803 | ID=Msa1031440-mRNA-1:cds;Parent=Msa1031440-mRNA-1 |
chr7_1 | three_prime_UTR | 66093355 | 66093854 | 66093355 | ID=Msa1031440-mRNA-1:three_prime_utr;Parent=Msa1031440-mRNA-1 |
Gene Sequence |
Protein sequence |