Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082420 | XP_003591544.1 | 96.519 | 316 | 6 | 1 | 1 | 311 | 1 | 316 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082420 | sp|Q9SRX9|BAH1_ARATH | 64.179 | 335 | 96 | 5 | 1 | 311 | 1 | 335 | 3.32e-152 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082420 | G7IF76 | 96.519 | 316 | 6 | 1 | 1 | 311 | 1 | 316 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0082420 | -0.812745 | 3.631895e-51 | -8.615850e-47 |
| Msa0001830 | Msa0082420 | 0.839072 | 1.972149e-57 | -8.615850e-47 |
| Msa0004480 | Msa0082420 | 0.805490 | 1.301937e-49 | -8.615850e-47 |
| Msa0026630 | Msa0082420 | 0.839777 | 1.293153e-57 | -8.615850e-47 |
| Msa0043850 | Msa0082420 | 0.861403 | 1.051416e-63 | -8.615850e-47 |
| Msa0052360 | Msa0082420 | 0.832049 | 1.180150e-55 | -8.615850e-47 |
| Msa0061220 | Msa0082420 | 0.831978 | 1.228479e-55 | -8.615850e-47 |
| Msa0077370 | Msa0082420 | 0.880282 | 6.241359e-70 | -8.615850e-47 |
| Msa0077380 | Msa0082420 | 0.808539 | 2.946389e-50 | -8.615850e-47 |
| Msa0081660 | Msa0082420 | 0.832159 | 1.108021e-55 | -8.615850e-47 |
| Msa0082230 | Msa0082420 | 0.962592 | 4.630200e-121 | -8.615850e-47 |
| Msa0082420 | Msa0090510 | 0.873962 | 9.786019e-68 | -8.615850e-47 |
| Msa0082420 | Msa0094710 | 0.808073 | 3.705326e-50 | -8.615850e-47 |
| Msa0082420 | Msa0097370 | 0.828058 | 1.110172e-54 | -8.615850e-47 |
| Msa0082420 | Msa0098290 | 0.816058 | 6.726377e-52 | -8.615850e-47 |
| Msa0082420 | Msa0101960 | 0.804230 | 2.386447e-49 | -8.615850e-47 |
| Msa0082420 | Msa0108760 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0082420 | Msa0115790 | 0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0082420 | Msa0117520 | 0.831044 | 2.086064e-55 | -8.615850e-47 |
| Msa0082420 | Msa0127870 | 0.831696 | 1.441971e-55 | -8.615850e-47 |
| Msa0082420 | Msa0128980 | 0.816934 | 4.280508e-52 | -8.615850e-47 |
| Msa0082420 | Msa0136630 | 0.810272 | 1.252038e-50 | -8.615850e-47 |
| Msa0082420 | Msa0137980 | 0.854832 | 9.461683e-62 | -8.615850e-47 |
| Msa0082420 | Msa0138020 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0082420 | Msa0138900 | 0.825874 | 3.694443e-54 | -8.615850e-47 |
| Msa0082420 | Msa0152560 | 0.806530 | 7.866232e-50 | -8.615850e-47 |
| Msa0082420 | Msa0160960 | 0.831915 | 1.273144e-55 | -8.615850e-47 |
| Msa0082420 | Msa0174010 | 0.831805 | 1.355323e-55 | -8.615850e-47 |
| Msa0082420 | Msa0174100 | 0.808380 | 3.187282e-50 | -8.615850e-47 |
| Msa0082420 | Msa0174820 | 0.869703 | 2.538418e-66 | -8.615850e-47 |
| Msa0082420 | Msa0183910 | 0.867369 | 1.439786e-65 | -8.615850e-47 |
| Msa0082420 | Msa0187310 | 0.804370 | 2.231872e-49 | -8.615850e-47 |
| Msa0082420 | Msa0196670 | 0.823071 | 1.686809e-53 | -8.615850e-47 |
| Msa0082420 | Msa0213540 | 0.814285 | 1.665239e-51 | -8.615850e-47 |
| Msa0082420 | Msa0213550 | 0.803491 | 3.399378e-49 | -8.615850e-47 |
| Msa0082420 | Msa0220400 | -0.811352 | 7.307622e-51 | -8.615850e-47 |
| Msa0082420 | Msa0224130 | 0.810298 | 1.235650e-50 | -8.615850e-47 |
| Msa0082420 | Msa0233370 | 0.830857 | 2.318195e-55 | -8.615850e-47 |
| Msa0082420 | Msa0234410 | -0.804496 | 2.101342e-49 | -8.615850e-47 |
| Msa0082420 | Msa0237320 | 0.823238 | 1.542656e-53 | -8.615850e-47 |
| Msa0082420 | Msa0256390 | 0.801681 | 8.029389e-49 | -8.615850e-47 |
| Msa0082420 | Msa0265270 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
| Msa0082420 | Msa0274740 | 0.813962 | 1.962646e-51 | -8.615850e-47 |
| Msa0082420 | Msa0276100 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0082420 | Msa0276430 | 0.804840 | 1.781074e-49 | -8.615850e-47 |
| Msa0082420 | Msa0278580 | 0.816610 | 5.061023e-52 | -8.615850e-47 |
| Msa0082420 | Msa0302730 | 0.810495 | 1.120377e-50 | -8.615850e-47 |
| Msa0082420 | Msa0302840 | 0.804122 | 2.513945e-49 | -8.615850e-47 |
| Msa0082420 | Msa0306000 | 0.804280 | 2.330101e-49 | -8.615850e-47 |
| Msa0082420 | Msa0310720 | -0.805267 | 1.450006e-49 | -8.615850e-47 |
| Msa0082420 | Msa0310730 | -0.822686 | 2.074185e-53 | -8.615850e-47 |
| Msa0082420 | Msa0317960 | 0.811353 | 7.305191e-51 | -8.615850e-47 |
| Msa0082420 | Msa0331020 | 0.843167 | 1.654600e-58 | -8.615850e-47 |
| Msa0082420 | Msa0332190 | 0.814148 | 1.785220e-51 | -8.615850e-47 |
| Msa0082420 | Msa0364790 | 0.815610 | 8.465677e-52 | -8.615850e-47 |
| Msa0082420 | Msa0365950 | 0.817381 | 3.395843e-52 | -8.615850e-47 |
| Msa0082420 | Msa0374340 | -0.827408 | 1.590752e-54 | -8.615850e-47 |
| Msa0082420 | Msa0374420 | -0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa0082420 | Msa0380400 | -0.814928 | 1.200086e-51 | -8.615850e-47 |
| Msa0082420 | Msa0382310 | 0.816811 | 4.562437e-52 | -8.615850e-47 |
| Msa0082420 | Msa0382370 | 0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa0082420 | Msa0385740 | 0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0082420 | Msa0388730 | 0.861215 | 1.199421e-63 | -8.615850e-47 |
| Msa0082420 | Msa0390550 | 0.832555 | 8.840728e-56 | -8.615850e-47 |
| Msa0082420 | Msa0403470 | -0.841143 | 5.679936e-58 | -8.615850e-47 |
| Msa0082420 | Msa0428200 | 0.814674 | 1.365839e-51 | -8.615850e-47 |
| Msa0082420 | Msa0431210 | 0.800425 | 1.449890e-48 | -8.615850e-47 |
| Msa0082420 | Msa0431900 | 0.850019 | 2.224947e-60 | -8.615850e-47 |
| Msa0082420 | Msa0439980 | 0.834723 | 2.541913e-56 | -8.615850e-47 |
| Msa0082420 | Msa0456770 | 0.812235 | 4.696108e-51 | -8.615850e-47 |
| Msa0082420 | Msa0476170 | -0.810156 | 1.326122e-50 | -8.615850e-47 |
| Msa0082420 | Msa0484630 | 0.819695 | 1.014757e-52 | -8.615850e-47 |
| Msa0082420 | Msa0484640 | 0.806482 | 8.052240e-50 | -8.615850e-47 |
| Msa0082420 | Msa0496970 | 0.801030 | 1.091052e-48 | -8.615850e-47 |
| Msa0082420 | Msa0517990 | 0.800761 | 1.238688e-48 | -8.615850e-47 |
| Msa0082420 | Msa0518170 | 0.828510 | 8.638179e-55 | -8.615850e-47 |
| Msa0082420 | Msa0519160 | 0.810309 | 1.229201e-50 | -8.615850e-47 |
| Msa0082420 | Msa0520270 | 0.812803 | 3.527357e-51 | -8.615850e-47 |
| Msa0082420 | Msa0520770 | 0.845580 | 3.717907e-59 | -8.615850e-47 |
| Msa0082420 | Msa0525770 | 0.801884 | 7.294825e-49 | -8.615850e-47 |
| Msa0082420 | Msa0527540 | 0.813473 | 2.514413e-51 | -8.615850e-47 |
| Msa0082420 | Msa0528990 | 0.824437 | 8.077427e-54 | -8.615850e-47 |
| Msa0082420 | Msa0529000 | 0.882988 | 6.559535e-71 | -8.615850e-47 |
| Msa0082420 | Msa0536350 | 0.805942 | 1.046417e-49 | -8.615850e-47 |
| Msa0082420 | Msa0542560 | 0.815244 | 1.021010e-51 | -8.615850e-47 |
| Msa0082420 | Msa0545020 | 0.827697 | 1.356149e-54 | -8.615850e-47 |
| Msa0082420 | Msa0545050 | 0.867894 | 9.776469e-66 | -8.615850e-47 |
| Msa0082420 | Msa0548650 | -0.811481 | 6.852966e-51 | -8.615850e-47 |
| Msa0082420 | Msa0567370 | 0.809541 | 1.798638e-50 | -8.615850e-47 |
| Msa0082420 | Msa0570700 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa0082420 | Msa0574930 | 0.841640 | 4.204469e-58 | -8.615850e-47 |
| Msa0082420 | Msa0584600 | 0.806465 | 8.120046e-50 | -8.615850e-47 |
| Msa0082420 | Msa0588590 | 0.810823 | 9.515319e-51 | -8.615850e-47 |
| Msa0082420 | Msa0592330 | 0.841111 | 5.791971e-58 | -8.615850e-47 |
| Msa0082420 | Msa0600590 | 0.879870 | 8.748874e-70 | -8.615850e-47 |
| Msa0082420 | Msa0604290 | 0.829218 | 5.822381e-55 | -8.615850e-47 |
| Msa0082420 | Msa0606080 | 0.807851 | 4.131129e-50 | -8.615850e-47 |
| Msa0082420 | Msa0610830 | 0.809791 | 1.589359e-50 | -8.615850e-47 |
| Msa0082420 | Msa0613420 | 0.801572 | 8.453635e-49 | -8.615850e-47 |
| Msa0082420 | Msa0623990 | 0.812751 | 3.620386e-51 | -8.615850e-47 |
| Msa0082420 | Msa0624060 | 0.814206 | 1.733508e-51 | -8.615850e-47 |
| Msa0082420 | Msa0632420 | 0.815247 | 1.019622e-51 | -8.615850e-47 |
| Msa0082420 | Msa0641130 | 0.868750 | 5.177085e-66 | -8.615850e-47 |
| Msa0082420 | Msa0645530 | 0.823074 | 1.684528e-53 | -8.615850e-47 |
| Msa0082420 | Msa0651560 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0082420 | Msa0653670 | 0.822708 | 2.050526e-53 | -8.615850e-47 |
| Msa0082420 | Msa0654900 | 0.803935 | 2.749446e-49 | -8.615850e-47 |
| Msa0082420 | Msa0657120 | 0.838835 | 2.270324e-57 | -8.615850e-47 |
| Msa0082420 | Msa0662540 | 0.827651 | 1.390828e-54 | -8.615850e-47 |
| Msa0082420 | Msa0676130 | 0.812214 | 4.745571e-51 | -8.615850e-47 |
| Msa0082420 | Msa0676180 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0082420 | Msa0679670 | 0.825470 | 4.606452e-54 | -8.615850e-47 |
| Msa0082420 | Msa0685090 | 0.823306 | 1.487257e-53 | -8.615850e-47 |
| Msa0082420 | Msa0694140 | 0.807694 | 4.461159e-50 | -8.615850e-47 |
| Msa0082420 | Msa0697680 | 0.840483 | 8.460262e-58 | -8.615850e-47 |
| Msa0082420 | Msa0698450 | 0.817006 | 4.125352e-52 | -8.615850e-47 |
| Msa0082420 | Msa0698460 | 0.822488 | 2.306063e-53 | -8.615850e-47 |
| Msa0082420 | Msa0701100 | 0.825728 | 4.000562e-54 | -8.615850e-47 |
| Msa0082420 | Msa0703810 | 0.822933 | 1.817184e-53 | -8.615850e-47 |
| Msa0082420 | Msa0734940 | 0.831415 | 1.690781e-55 | -8.615850e-47 |
| Msa0082420 | Msa0740120 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0082420 | Msa0744640 | 0.839593 | 1.444152e-57 | -8.615850e-47 |
| Msa0082420 | Msa0771950 | 0.807077 | 6.028634e-50 | -8.615850e-47 |
| Msa0082420 | Msa0772280 | 0.817399 | 3.365481e-52 | -8.615850e-47 |
| Msa0082420 | Msa0795340 | 0.800227 | 1.590708e-48 | -8.615850e-47 |
| Msa0082420 | Msa0802240 | 0.812316 | 4.507332e-51 | -8.615850e-47 |
| Msa0082420 | Msa0810440 | 0.827306 | 1.682368e-54 | -8.615850e-47 |
| Msa0082420 | Msa0823540 | 0.822437 | 2.370327e-53 | -8.615850e-47 |
| Msa0082420 | Msa0830030 | 0.805934 | 1.050136e-49 | -8.615850e-47 |
| Msa0082420 | Msa0841730 | 0.840067 | 1.086895e-57 | -8.615850e-47 |
| Msa0082420 | Msa0862620 | 0.811197 | 7.895388e-51 | -8.615850e-47 |
| Msa0082420 | Msa0863990 | 0.819848 | 9.360407e-53 | -8.615850e-47 |
| Msa0082420 | Msa0864820 | -0.810165 | 1.320332e-50 | -8.615850e-47 |
| Msa0082420 | Msa0875080 | 0.826126 | 3.218195e-54 | -8.615850e-47 |
| Msa0082420 | Msa0881530 | -0.827641 | 1.398598e-54 | -8.615850e-47 |
| Msa0082420 | Msa0907430 | 0.832463 | 9.318082e-56 | -8.615850e-47 |
| Msa0082420 | Msa0910620 | 0.831212 | 1.897595e-55 | -8.615850e-47 |
| Msa0082420 | Msa0930740 | 0.822006 | 2.983705e-53 | -8.615850e-47 |
| Msa0082420 | Msa0940340 | 0.839544 | 1.487095e-57 | -8.615850e-47 |
| Msa0082420 | Msa0968470 | -0.814920 | 1.204726e-51 | -8.615850e-47 |
| Msa0082420 | Msa0982090 | -0.852475 | 4.506279e-61 | -8.615850e-47 |
| Msa0082420 | Msa0985180 | 0.827461 | 1.544959e-54 | -8.615850e-47 |
| Msa0082420 | Msa1008390 | 0.801357 | 9.356056e-49 | -8.615850e-47 |
| Msa0082420 | Msa1011090 | 0.816752 | 4.704082e-52 | -8.615850e-47 |
| Msa0082420 | Msa1011250 | 0.811216 | 7.821523e-51 | -8.615850e-47 |
| Msa0082420 | Msa1013070 | 0.832797 | 7.699957e-56 | -8.615850e-47 |
| Msa0082420 | Msa1016960 | 0.820298 | 7.385260e-53 | -8.615850e-47 |
| Msa0082420 | Msa1022030 | 0.830296 | 3.181526e-55 | -8.615850e-47 |
| Msa0082420 | Msa1023310 | 0.852353 | 4.882184e-61 | -8.615850e-47 |
| Msa0082420 | Msa1024710 | 0.812001 | 5.280828e-51 | -8.615850e-47 |
| Msa0082420 | Msa1031440 | 0.821108 | 4.809694e-53 | -8.615850e-47 |
| Msa0082420 | Msa1031460 | 0.851436 | 8.888931e-61 | -8.615850e-47 |
| Msa0082420 | Msa1044510 | 0.815397 | 9.442781e-52 | -8.615850e-47 |
| Msa0082420 | Msa1058200 | 0.828100 | 1.084576e-54 | -8.615850e-47 |
| Msa0082420 | Msa1062040 | 0.893620 | 5.303648e-75 | -8.615850e-47 |
| Msa0082420 | Msa1063360 | 0.817046 | 4.038960e-52 | -8.615850e-47 |
| Msa0082420 | Msa1070520 | 0.843767 | 1.144573e-58 | -8.615850e-47 |
| Msa0082420 | Msa1070540 | 0.872679 | 2.642920e-67 | -8.615850e-47 |
| Msa0082420 | Msa1082360 | 0.825653 | 4.168978e-54 | -8.615850e-47 |
| Msa0082420 | Msa1089460 | 0.814364 | 1.599538e-51 | -8.615850e-47 |
| Msa0082420 | Msa1094280 | 0.802416 | 5.669716e-49 | -8.615850e-47 |
| Msa0082420 | Msa1101220 | 0.853589 | 2.162647e-61 | -8.615850e-47 |
| Msa0082420 | Msa1101240 | 0.870510 | 1.381750e-66 | -8.615850e-47 |
| Msa0082420 | Msa1107200 | 0.889988 | 1.478973e-73 | -8.615850e-47 |
| Msa0082420 | Msa1109810 | 0.837330 | 5.538868e-57 | -8.615850e-47 |
| Msa0082420 | Msa1111610 | 0.812604 | 3.900360e-51 | -8.615850e-47 |
| Msa0082420 | Msa1113100 | 0.824845 | 6.472954e-54 | -8.615850e-47 |
| Msa0082420 | Msa1122150 | 0.824959 | 6.082487e-54 | -8.615850e-47 |
| Msa0082420 | Msa1124530 | -0.806196 | 9.250612e-50 | -8.615850e-47 |
| Msa0082420 | Msa1128270 | 0.824993 | 5.971088e-54 | -8.615850e-47 |
| Msa0082420 | Msa1137780 | 0.809851 | 1.542474e-50 | -8.615850e-47 |
| Msa0082420 | Msa1140630 | 0.817944 | 2.535161e-52 | -8.615850e-47 |
| Msa0082420 | Msa1150780 | 0.877873 | 4.431760e-69 | -8.615850e-47 |
| Msa0082420 | Msa1158370 | 0.849586 | 2.940492e-60 | -8.615850e-47 |
| Msa0082420 | Msa1160560 | 0.829259 | 5.688743e-55 | -8.615850e-47 |
| Msa0082420 | Msa1166250 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0082420 | Msa1168640 | 0.846511 | 2.074701e-59 | -8.615850e-47 |
| Msa0082420 | Msa1175200 | 0.804665 | 1.937487e-49 | -8.615850e-47 |
| Msa0082420 | Msa1176170 | 0.831259 | 1.847154e-55 | -8.615850e-47 |
| Msa0082420 | Msa1176380 | 0.803442 | 3.479207e-49 | -8.615850e-47 |
| Msa0082420 | Msa1180720 | 0.808993 | 2.356579e-50 | -8.615850e-47 |
| Msa0082420 | Msa1183140 | 0.857629 | 1.433182e-62 | -8.615850e-47 |
| Msa0082420 | Msa1188350 | 0.811176 | 7.980534e-51 | -8.615850e-47 |
| Msa0082420 | Msa1190100 | -0.809173 | 2.156297e-50 | -8.615850e-47 |
| Msa0082420 | Msa1203480 | 0.813382 | 2.633450e-51 | -8.615850e-47 |
| Msa0082420 | Msa1208450 | -0.817099 | 3.930365e-52 | -8.615850e-47 |
| Msa0082420 | Msa1208990 | 0.816889 | 4.382015e-52 | -8.615850e-47 |
| Msa0082420 | Msa1218160 | 0.818084 | 2.357309e-52 | -8.615850e-47 |
| Msa0082420 | Msa1220930 | 0.844359 | 7.939729e-59 | -8.615850e-47 |
| Msa0082420 | Msa1221330 | 0.805326 | 1.409275e-49 | -8.615850e-47 |
| Msa0082420 | Msa1225580 | 0.803630 | 3.180876e-49 | -8.615850e-47 |
| Msa0082420 | Msa1229480 | 0.837181 | 6.048670e-57 | -8.615850e-47 |
| Msa0082420 | Msa1238500 | 0.808806 | 2.584200e-50 | -8.615850e-47 |
| Msa0082420 | Msa1239620 | 0.801036 | 1.088212e-48 | -8.615850e-47 |
| Msa0082420 | Msa1240970 | 0.816084 | 6.635508e-52 | -8.615850e-47 |
| Msa0082420 | Msa1259860 | 0.827443 | 1.559892e-54 | -8.615850e-47 |
| Msa0082420 | Msa1260060 | 0.821336 | 4.262219e-53 | -8.615850e-47 |
| Msa0082420 | Msa1266150 | 0.841434 | 4.762215e-58 | -8.615850e-47 |
| Msa0082420 | Msa1267480 | 0.811516 | 6.733964e-51 | -8.615850e-47 |
| Msa0082420 | Msa1267510 | 0.811641 | 6.325591e-51 | -8.615850e-47 |
| Msa0082420 | Msa1272010 | 0.824719 | 6.929255e-54 | -8.615850e-47 |
| Msa0082420 | Msa1277410 | 0.821403 | 4.113999e-53 | -8.615850e-47 |
| Msa0082420 | Msa1277780 | 0.801833 | 7.472618e-49 | -8.615850e-47 |
| Msa0082420 | Msa1280170 | 0.809167 | 2.163011e-50 | -8.615850e-47 |
| Msa0082420 | Msa1298390 | -0.811647 | 6.305857e-51 | -8.615850e-47 |
| Msa0082420 | Msa1307160 | 0.845010 | 5.301463e-59 | -8.615850e-47 |
| Msa0082420 | Msa1307180 | 0.823734 | 1.180931e-53 | -8.615850e-47 |
| Msa0082420 | Msa1309760 | 0.845997 | 2.863617e-59 | -8.615850e-47 |
| Msa0082420 | Msa1309870 | 0.817402 | 3.359768e-52 | -8.615850e-47 |
| Msa0082420 | Msa1312440 | 0.813217 | 2.861564e-51 | -8.615850e-47 |
| Msa0082420 | Msa1316360 | 0.835211 | 1.914377e-56 | -8.615850e-47 |
| Msa0082420 | Msa1316460 | 0.809084 | 2.253143e-50 | -8.615850e-47 |
| Msa0082420 | Msa1325410 | -0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0082420 | Msa1364080 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
| Msa0082420 | Msa1364350 | -0.823864 | 1.101103e-53 | -8.615850e-47 |
| Msa0082420 | Msa1368360 | 0.804460 | 2.137598e-49 | -8.615850e-47 |
| Msa0082420 | Msa1368610 | 0.848386 | 6.335019e-60 | -8.615850e-47 |
| Msa0082420 | Msa1369920 | -0.838487 | 2.792794e-57 | -8.615850e-47 |
| Msa0082420 | Msa1370810 | 0.926461 | 4.545389e-91 | -8.615850e-47 |
| Msa0082420 | Msa1375610 | -0.810953 | 8.919508e-51 | -8.615850e-47 |
| Msa0082420 | Msa1376550 | -0.812447 | 4.220976e-51 | -8.615850e-47 |
| Msa0082420 | Msa1378410 | 0.813949 | 1.975236e-51 | -8.615850e-47 |
| Msa0082420 | Msa1382020 | 0.832866 | 7.401190e-56 | -8.615850e-47 |
| Msa0082420 | Msa1382380 | -0.853822 | 1.852810e-61 | -8.615850e-47 |
| Msa0082420 | Msa1389640 | 0.843677 | 1.209756e-58 | -8.615850e-47 |
| Msa0082420 | Msa1400930 | 0.805962 | 1.036255e-49 | -8.615850e-47 |
| Msa0082420 | Msa1404290 | 0.843591 | 1.275664e-58 | -8.615850e-47 |
| Msa0082420 | Msa1407760 | 0.843578 | 1.285204e-58 | -8.615850e-47 |
| Msa0082420 | Msa1407880 | 0.824899 | 6.286711e-54 | -8.615850e-47 |
| Msa0082420 | Msa1411250 | 0.801225 | 9.955334e-49 | -8.615850e-47 |
| Msa0082420 | Msa1418970 | 0.809404 | 1.923965e-50 | -8.615850e-47 |
| Msa0082420 | Msa1419840 | 0.853062 | 3.063303e-61 | -8.615850e-47 |
| Msa0082420 | Msa1423540 | 0.822939 | 1.810914e-53 | -8.615850e-47 |
| Msa0082420 | Msa1437730 | 0.819820 | 9.498944e-53 | -8.615850e-47 |
| Msa0082420 | Msa1441040 | 0.802301 | 5.988057e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082420 | MtrunA17_Chr1g0195671 | 96.519 | 316 | 6 | 1 | 1 | 311 | 1 | 316 | 0.0 | 628 |
| Msa0082420 | MtrunA17_Chr7g0269281 | 81.329 | 316 | 54 | 1 | 1 | 311 | 1 | 316 | 0.0 | 517 |
| Msa0082420 | MtrunA17_Chr7g0268131 | 41.337 | 329 | 173 | 5 | 1 | 311 | 1 | 327 | 6.34e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082420 | AT1G02860.1 | 64.179 | 335 | 96 | 5 | 1 | 311 | 1 | 335 | 3.38e-153 | 432 |
| Msa0082420 | AT1G02860.2 | 63.582 | 335 | 96 | 6 | 1 | 311 | 1 | 333 | 1.34e-149 | 423 |
| Msa0082420 | AT1G02860.3 | 61.277 | 235 | 67 | 5 | 1 | 211 | 1 | 235 | 1.20e-90 | 270 |
| Msa0082420 | AT2G38920.5 | 45.149 | 268 | 141 | 2 | 48 | 310 | 68 | 334 | 1.11e-75 | 235 |
| Msa0082420 | AT2G38920.1 | 45.149 | 268 | 141 | 2 | 48 | 310 | 68 | 334 | 1.11e-75 | 235 |
| Msa0082420 | AT2G38920.6 | 45.149 | 268 | 141 | 2 | 48 | 310 | 68 | 334 | 1.11e-75 | 235 |
| Msa0082420 | AT2G38920.2 | 45.522 | 268 | 139 | 3 | 48 | 310 | 68 | 333 | 6.83e-75 | 233 |
| Msa0082420 | AT2G38920.4 | 37.870 | 169 | 99 | 2 | 48 | 211 | 68 | 235 | 2.85e-31 | 117 |
| Msa0082420 | AT2G38920.3 | 35.625 | 160 | 97 | 2 | 48 | 202 | 68 | 226 | 8.75e-26 | 103 |
Find 85 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATGCTGTCTCACATTTA+AGG | 0.203509 | 1_2:+61289533 | Msa0082420:CDS |
| GCCTTTACTTTGATCGATTC+TGG | 0.234863 | 1_2:-61291099 | None:intergenic |
| AGGAAGAAAGGATGGGGTTT+GGG | 0.288964 | 1_2:-61286894 | None:intergenic |
| CTGGAACGACATCTTGCTTC+TGG | 0.289645 | 1_2:+61289121 | Msa0082420:CDS |
| TGGCATTACATATCAATCTA+AGG | 0.297202 | 1_2:+61289469 | Msa0082420:CDS |
| GAATTTCCTTGTGCATAGTC+TGG | 0.333742 | 1_2:-61289419 | None:intergenic |
| TTCCTTGCTATGTTCGTGTT+AGG | 0.348168 | 1_2:-61291221 | None:intergenic |
| AAGGAAGAAAGGATGGGGTT+TGG | 0.354555 | 1_2:-61286895 | None:intergenic |
| TACTATTGTTGATGGGCTTA+AGG | 0.357492 | 1_2:+61290095 | Msa0082420:CDS |
| CAATGAAATGTCAGAAATAG+TGG | 0.363110 | 1_2:+61289069 | Msa0082420:CDS |
| TGGCCACAAGTCAGAGAAAC+TGG | 0.385626 | 1_2:-61290033 | None:intergenic |
| TTTACAGCTGCAAGGAGTAC+TGG | 0.387587 | 1_2:+61290872 | Msa0082420:intron |
| TCAACATGAGAATGTACTTT+CGG | 0.395088 | 1_2:-61289147 | None:intergenic |
| GCATCTGTTACTATTGTTGA+TGG | 0.400772 | 1_2:+61290087 | Msa0082420:CDS |
| TCTGACTTGCTCTATATGTT+TGG | 0.403804 | 1_2:+61289611 | Msa0082420:CDS |
| TGTTGAAAGGAAAATCAAAA+AGG | 0.412750 | 1_2:+61289164 | Msa0082420:CDS |
| AACGCAGTGTAGAGCGTTCA+TGG | 0.417759 | 1_2:+61290954 | Msa0082420:CDS |
| ACTTTGGCATCTGTACCTTA+AGG | 0.417794 | 1_2:+61291127 | Msa0082420:three_prime_UTR |
| GAAGTTCTGCAAGACCTATC+AGG | 0.420448 | 1_2:+61287018 | Msa0082420:CDS |
| TTTGAGATAGATATGATAAC+GGG | 0.422854 | 1_2:+61286855 | Msa0082420:five_prime_UTR |
| CAAACCTCACTTGGGTTCAA+TGG | 0.439730 | 1_2:+61290994 | Msa0082420:three_prime_UTR |
| GACGTACATGGGCATTGATC+AGG | 0.450499 | 1_2:-61287148 | None:intergenic |
| AGCTTCTTGAATCCAACTAC+AGG | 0.454546 | 1_2:-61287073 | None:intergenic |
| TCAAGCAAGCAAAGGAGCAC+TGG | 0.456757 | 1_2:+61290929 | Msa0082420:CDS |
| CAGAAGAAGCTCCCTGTAGT+TGG | 0.458661 | 1_2:+61287061 | Msa0082420:CDS |
| CATCTGTTACTATTGTTGAT+GGG | 0.462476 | 1_2:+61290088 | Msa0082420:CDS |
| AGGAAATTCTTCAGAGTCCC+TGG | 0.466281 | 1_2:+61289433 | Msa0082420:CDS |
| ACCAGAATCGATCAAAGTAA+AGG | 0.467205 | 1_2:+61291098 | Msa0082420:three_prime_UTR |
| TATGAACAAGGAAGAAAGGA+TGG | 0.472140 | 1_2:-61286902 | None:intergenic |
| TGCCATCAGCTCAATAAGCC+AGG | 0.477293 | 1_2:-61289451 | None:intergenic |
| TTATGAAGGTGCTGTACACT+TGG | 0.484901 | 1_2:+61290664 | Msa0082420:CDS |
| GACATTTCATTGAGAAGGGA+AGG | 0.485733 | 1_2:-61289058 | None:intergenic |
| GATCCAGTTTCTCTGACTTG+TGG | 0.486686 | 1_2:+61290030 | Msa0082420:CDS |
| TTTCTGACATTTCATTGAGA+AGG | 0.491436 | 1_2:-61289063 | None:intergenic |
| CTCAAATCCTCCTTGCTCTA+CGG | 0.491837 | 1_2:-61286838 | None:intergenic |
| ATTGATCAGGACAAGGTTTG+TGG | 0.494079 | 1_2:-61287135 | None:intergenic |
| AATTTCCTTGTGCATAGTCT+GGG | 0.496401 | 1_2:-61289418 | None:intergenic |
| GCTGGATAATGCATTCTCTC+TGG | 0.501749 | 1_2:-61291194 | None:intergenic |
| ATTTGAGATAGATATGATAA+CGG | 0.508006 | 1_2:+61286854 | Msa0082420:five_prime_UTR |
| GTAGAGAAGCAAACCTCACT+TGG | 0.508655 | 1_2:+61290985 | Msa0082420:three_prime_UTR |
| CATACTACTTTAATTCATGA+AGG | 0.511669 | 1_2:+61289190 | Msa0082420:CDS |
| ATAATATGAACAAGGAAGAA+AGG | 0.514625 | 1_2:-61286906 | None:intergenic |
| TGACAGGCAGGAGTTTATGA+AGG | 0.519168 | 1_2:+61290650 | Msa0082420:intron |
| TCAGGAATACATGCGAGCTC+AGG | 0.526255 | 1_2:+61287036 | Msa0082420:CDS |
| AATACTAAAGAAATACGATA+AGG | 0.526973 | 1_2:+61289261 | Msa0082420:CDS |
| TTCTGACATTTCATTGAGAA+GGG | 0.527417 | 1_2:-61289062 | None:intergenic |
| TTACAGCTGCAAGGAGTACT+GGG | 0.534094 | 1_2:+61290873 | Msa0082420:intron |
| GGCATTACATATCAATCTAA+GGG | 0.535814 | 1_2:+61289470 | Msa0082420:CDS |
| AAGGCAACCACATTATTCAA+TGG | 0.537425 | 1_2:+61289513 | Msa0082420:CDS |
| TCCCTGGCTTATTGAGCTGA+TGG | 0.545974 | 1_2:+61289449 | Msa0082420:CDS |
| CTGGGAGGAAAGACTTCAGA+TGG | 0.554408 | 1_2:+61290891 | Msa0082420:CDS |
| TCAGCGTGCACAGAAACTGC+TGG | 0.555825 | 1_2:+61289102 | Msa0082420:CDS |
| CACAACTGTAGCAGAATATG+TGG | 0.556209 | 1_2:-61290053 | None:intergenic |
| ATGAACAAGGAAGAAAGGAT+GGG | 0.560709 | 1_2:-61286901 | None:intergenic |
| AGCTCGCATGTATTCCTGAT+AGG | 0.561249 | 1_2:-61287032 | None:intergenic |
| CAAGCAAGCAAAGGAGCACT+GGG | 0.568388 | 1_2:+61290930 | Msa0082420:CDS |
| TCAATATGTTTACAGCTGCA+AGG | 0.570008 | 1_2:+61290864 | Msa0082420:intron |
| TGCTGTCTCACATTTAAGGA+TGG | 0.573316 | 1_2:+61289537 | Msa0082420:CDS |
| TCAGATGGAAAGAGTAGAGA+GGG | 0.577968 | 1_2:+61290906 | Msa0082420:CDS |
| AAGTACATTCTCATGTTGAA+AGG | 0.578077 | 1_2:+61289151 | Msa0082420:CDS |
| GGGAAACTAAAGACAAGTCA+AGG | 0.583655 | 1_2:+61289490 | Msa0082420:CDS |
| TGAACAAGGAAGAAAGGATG+GGG | 0.584638 | 1_2:-61286900 | None:intergenic |
| AATGAAATGTCAGAAATAGT+GGG | 0.585835 | 1_2:+61289070 | Msa0082420:CDS |
| TAACATGTTTCCGTAGAGCA+AGG | 0.586503 | 1_2:+61286828 | None:intergenic |
| ACGCAGTGTAGAGCGTTCAT+GGG | 0.593633 | 1_2:+61290955 | Msa0082420:CDS |
| GCCATCAGCTCAATAAGCCA+GGG | 0.598446 | 1_2:-61289450 | None:intergenic |
| ATCCTAACACGAACATAGCA+AGG | 0.601512 | 1_2:+61291219 | Msa0082420:three_prime_UTR |
| CATGGGCATTGATCAGGACA+AGG | 0.604815 | 1_2:-61287142 | None:intergenic |
| AGAGAGGGTCAAGCAAGCAA+AGG | 0.606390 | 1_2:+61290921 | Msa0082420:CDS |
| AAGAGCTCACAAGCAAGTGA+TGG | 0.610123 | 1_2:-61289564 | None:intergenic |
| AACTAAAGACAAGTCAAGGA+AGG | 0.614374 | 1_2:+61289494 | Msa0082420:CDS |
| GTAGCTACCTCTCGGCACAT+AGG | 0.618860 | 1_2:-61290141 | None:intergenic |
| ATGTTCGTGTTAGGATACGC+TGG | 0.627501 | 1_2:-61291212 | None:intergenic |
| AGAGAAAGAGAAACAGCGCA+CGG | 0.627878 | 1_2:-61286935 | None:intergenic |
| TACACCATTGAACCCAAGTG+AGG | 0.633884 | 1_2:-61290998 | None:intergenic |
| TAGAGAAGCAAACCTCACTT+GGG | 0.636136 | 1_2:+61290986 | Msa0082420:three_prime_UTR |
| TTCAGATGGAAAGAGTAGAG+AGG | 0.639549 | 1_2:+61290905 | Msa0082420:CDS |
| GCTTCTTGAATCCAACTACA+GGG | 0.643810 | 1_2:-61287072 | None:intergenic |
| CATGTTTCCGTAGAGCAAGG+AGG | 0.677715 | 1_2:+61286831 | None:intergenic |
| GGAAGTGAATAATATGAACA+AGG | 0.680477 | 1_2:-61286914 | None:intergenic |
| TTGAGATAGATATGATAACG+GGG | 0.686299 | 1_2:+61286856 | Msa0082420:five_prime_UTR |
| ACAAGCCCAGACTATGCACA+AGG | 0.690000 | 1_2:+61289413 | Msa0082420:CDS |
| ACAGCATCCATTGAATAATG+TGG | 0.696194 | 1_2:-61289520 | None:intergenic |
| AAAATGTCCTATGTGCCGAG+AGG | 0.727589 | 1_2:+61290134 | Msa0082420:CDS |
| CAGCTGCAAGGAGTACTGGG+AGG | 0.743316 | 1_2:+61290876 | Msa0082420:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTTCATTAATAATAATA+AGG | - | chr1_2:61290601-61290620 | None:intergenic | 10.0% |
| !! | AAATAATTAATCGAAATGAT+GGG | - | chr1_2:61287180-61287199 | None:intergenic | 15.0% |
| !! | AAAATAATTAATCGAAATGA+TGG | - | chr1_2:61287181-61287200 | None:intergenic | 15.0% |
| !! | CAAACATTTGAAAATAATTT+GGG | - | chr1_2:61287246-61287265 | None:intergenic | 15.0% |
| !! | TCAAACATTTGAAAATAATT+TGG | - | chr1_2:61287247-61287266 | None:intergenic | 15.0% |
| !! | AATTAACTATTATCAATTTG+TGG | + | chr1_2:61287556-61287575 | Msa0082420:intron | 15.0% |
| !! | ATTAACTATTATCAATTTGT+GGG | + | chr1_2:61287557-61287576 | Msa0082420:intron | 15.0% |
| !!! | TTGAGTAAATATATTTTTTG+TGG | - | chr1_2:61289787-61289806 | None:intergenic | 15.0% |
| !!! | TTCAATTGATAATTTTAATC+TGG | + | chr1_2:61289981-61290000 | Msa0082420:intron | 15.0% |
| !!! | TAATTCAATTCATTTGTTAA+TGG | - | chr1_2:61290735-61290754 | None:intergenic | 15.0% |
| !! | ATTGAATTAAAATAAAGAGA+TGG | + | chr1_2:61290746-61290765 | Msa0082420:intron | 15.0% |
| !! | GTAAACATATTGAAATTATA+AGG | - | chr1_2:61290857-61290876 | None:intergenic | 15.0% |
| !!! | ATTTGAGATAGATATGATAA+CGG | + | chr1_2:61286854-61286873 | Msa0082420:five_prime_UTR | 20.0% |
| !! | GATGAATAAAAATTGAATGA+AGG | - | chr1_2:61287316-61287335 | None:intergenic | 20.0% |
| !! | AAATTCATGAACTAAATTGA+TGG | - | chr1_2:61287422-61287441 | None:intergenic | 20.0% |
| !! | TAGGAGTTTGATTAATATTA+AGG | - | chr1_2:61287448-61287467 | None:intergenic | 20.0% |
| !! | TTAATATTGAGAGTTCATTT+AGG | - | chr1_2:61287467-61287486 | None:intergenic | 20.0% |
| !! | TTAACTATTATCAATTTGTG+GGG | + | chr1_2:61287558-61287577 | Msa0082420:intron | 20.0% |
| !! | AATAATAAATGATGAAGTGT+TGG | - | chr1_2:61287872-61287891 | None:intergenic | 20.0% |
| !! | ATATAATTATGGTGTGAAAT+TGG | + | chr1_2:61288182-61288201 | Msa0082420:intron | 20.0% |
| !!! | GATATTTCAATTGTATTGAT+TGG | + | chr1_2:61288638-61288657 | Msa0082420:intron | 20.0% |
| !! | TATAAGAATTAAGAGTTTGT+AGG | + | chr1_2:61288874-61288893 | Msa0082420:intron | 20.0% |
| !!! | TATAATGATGTCATTTTCTT+TGG | + | chr1_2:61288927-61288946 | Msa0082420:intron | 20.0% |
| !!! | ATAATGATGTCATTTTCTTT+GGG | + | chr1_2:61288928-61288947 | Msa0082420:intron | 20.0% |
| !! | AATACTAAAGAAATACGATA+AGG | + | chr1_2:61289261-61289280 | Msa0082420:CDS | 20.0% |
| !! | AAAAGAAAAGAAAAAAGTGA+AGG | - | chr1_2:61289961-61289980 | None:intergenic | 20.0% |
| !! | AAAAGTTATTGATGTAAGAA+TGG | - | chr1_2:61290199-61290218 | None:intergenic | 20.0% |
| !! | TTTCAATGGTAAAAATTAAC+AGG | - | chr1_2:61290376-61290395 | None:intergenic | 20.0% |
| !!! | GTCTTTATTTATAGTGAAAA+AGG | - | chr1_2:61290546-61290565 | None:intergenic | 20.0% |
| !!! | TTTTCACTATAAATAAAGAC+TGG | + | chr1_2:61290546-61290565 | Msa0082420:intron | 20.0% |
| !! | TTTCACTATAAATAAAGACT+GGG | + | chr1_2:61290547-61290566 | Msa0082420:intron | 20.0% |
| !! | TAATTTATACTGTTTATGAC+AGG | + | chr1_2:61290634-61290653 | Msa0082420:intron | 20.0% |
| !!! | GAAGAATTGAATATTTTGTT+AGG | + | chr1_2:61290686-61290705 | Msa0082420:CDS | 20.0% |
| !!! | TGAATATTTTGTTAGGAAAA+AGG | + | chr1_2:61290693-61290712 | Msa0082420:CDS | 20.0% |
| !! | TTTGAGATAGATATGATAAC+GGG | + | chr1_2:61286855-61286874 | Msa0082420:five_prime_UTR | 25.0% |
| ! | ATAATATGAACAAGGAAGAA+AGG | - | chr1_2:61286909-61286928 | None:intergenic | 25.0% |
| !!! | CTCTCATTAGTCATTTTTAT+TGG | + | chr1_2:61287335-61287354 | Msa0082420:intron | 25.0% |
| !! | CTCAAATTACTCCTTTTAAT+CGG | + | chr1_2:61287499-61287518 | Msa0082420:intron | 25.0% |
| ! | TAGTTAATTATATGTCCTTC+AGG | - | chr1_2:61287545-61287564 | None:intergenic | 25.0% |
| ! | CTTGTTTAAGAATATGAGAA+TGG | + | chr1_2:61287759-61287778 | Msa0082420:intron | 25.0% |
| ! | TCATTTATTATTCTTTGCTC+AGG | + | chr1_2:61287880-61287899 | Msa0082420:intron | 25.0% |
| ! | TGGTGGAAAACATATAATTA+TGG | + | chr1_2:61288171-61288190 | Msa0082420:intron | 25.0% |
| ! | ATAGGTAATGCTTAATGAAA+AGG | + | chr1_2:61288535-61288554 | Msa0082420:intron | 25.0% |
| ! | TAGGTAATGCTTAATGAAAA+GGG | + | chr1_2:61288536-61288555 | Msa0082420:intron | 25.0% |
| !!! | AGAATTGTTTTTGAAGGAAT+TGG | + | chr1_2:61288587-61288606 | Msa0082420:intron | 25.0% |
| !!! | GAATTGTTTTTGAAGGAATT+GGG | + | chr1_2:61288588-61288607 | Msa0082420:intron | 25.0% |
| !!! | TTCAATTGTATTGATTGGAT+TGG | + | chr1_2:61288643-61288662 | Msa0082420:intron | 25.0% |
| ! | TTCTTATAATAGACTACAAG+CGG | - | chr1_2:61288862-61288881 | None:intergenic | 25.0% |
| ! | AATGAAATGTCAGAAATAGT+GGG | + | chr1_2:61289070-61289089 | Msa0082420:CDS | 25.0% |
| ! | TGTTGAAAGGAAAATCAAAA+AGG | + | chr1_2:61289164-61289183 | Msa0082420:CDS | 25.0% |
| ! | CATACTACTTTAATTCATGA+AGG | + | chr1_2:61289190-61289209 | Msa0082420:CDS | 25.0% |
| !! | TTTCTTTTGCATGCTAATTT+TGG | + | chr1_2:61289302-61289321 | Msa0082420:intron | 25.0% |
| ! | AGATTCATTATTCTAAGCAA+GGG | + | chr1_2:61289376-61289395 | Msa0082420:intron | 25.0% |
| !! | CAGATCAATATCAATTTTGA+TGG | - | chr1_2:61289595-61289614 | None:intergenic | 25.0% |
| ! | TTGTATTGAAATTGTAAACC+AGG | + | chr1_2:61289746-61289765 | Msa0082420:intron | 25.0% |
| ! | ATAGTTTCAAATATGTGACA+TGG | + | chr1_2:61289822-61289841 | Msa0082420:intron | 25.0% |
| ! | GGAAAATATTGAACAACATA+AGG | - | chr1_2:61289871-61289890 | None:intergenic | 25.0% |
| !! | TCAATATTTTCCTAACCAAT+TGG | + | chr1_2:61289879-61289898 | Msa0082420:intron | 25.0% |
| !! | AAGAAGATCTAAAGTTTCAA+TGG | - | chr1_2:61290390-61290409 | None:intergenic | 25.0% |
| !!! | CAGAACTGTTTACTTATTTT+AGG | + | chr1_2:61290484-61290503 | Msa0082420:intron | 25.0% |
| ! | TTCACTATAAATAAAGACTG+GGG | + | chr1_2:61290548-61290567 | Msa0082420:intron | 25.0% |
| ! | AATATAACACCACAATTAAG+AGG | - | chr1_2:61290801-61290820 | None:intergenic | 25.0% |
| ! | AATTATAAGGTTAAGACACT+TGG | - | chr1_2:61290844-61290863 | None:intergenic | 25.0% |
| !! | AAAGTAAAGGCTTTTTACTT+TGG | + | chr1_2:61291111-61291130 | Msa0082420:three_prime_UTR | 25.0% |
| ! | ATACACTAGCCAAAAATAAA+TGG | - | chr1_2:61291153-61291172 | None:intergenic | 25.0% |
| ! | TTGAGATAGATATGATAACG+GGG | + | chr1_2:61286856-61286875 | Msa0082420:five_prime_UTR | 30.0% |
| GGAAGTGAATAATATGAACA+AGG | - | chr1_2:61286917-61286936 | None:intergenic | 30.0% | |
| TAAAAACATCAGAGAGAAAG+AGG | - | chr1_2:61286989-61287008 | None:intergenic | 30.0% | |
| !! | ATTAATCGAAATGATGGGTT+CGG | - | chr1_2:61287175-61287194 | None:intergenic | 30.0% |
| ATATATTCACGATCCAATTC+AGG | + | chr1_2:61287288-61287307 | Msa0082420:intron | 30.0% | |
| AAGACTAATGTCCGATTAAA+AGG | - | chr1_2:61287513-61287532 | None:intergenic | 30.0% | |
| AGTCTTAAAATTTGTCCTGA+AGG | + | chr1_2:61287527-61287546 | Msa0082420:intron | 30.0% | |
| ACATATTAAACTGCTCACTA+AGG | - | chr1_2:61287594-61287613 | None:intergenic | 30.0% | |
| TATGTTATTCACTAGTACTG+TGG | + | chr1_2:61287609-61287628 | Msa0082420:intron | 30.0% | |
| TTTATTATTCTTTGCTCAGG+AGG | + | chr1_2:61287883-61287902 | Msa0082420:intron | 30.0% | |
| !!! | TGTCGATGGTTGTTTTAAAA+TGG | + | chr1_2:61287965-61287984 | Msa0082420:intron | 30.0% |
| !!! | ATGGTTGTTTTAAAATGGCT+GGG | + | chr1_2:61287970-61287989 | Msa0082420:intron | 30.0% |
| ! | TAATTTTGTATGCTTGTGTG+TGG | + | chr1_2:61288088-61288107 | Msa0082420:intron | 30.0% |
| TGTGGAAAATTTGCAAAGTA+AGG | + | chr1_2:61288106-61288125 | Msa0082420:intron | 30.0% | |
| AAAATTTGCAAAGTAAGGCA+TGG | + | chr1_2:61288111-61288130 | Msa0082420:intron | 30.0% | |
| TTGGTTAGATGGTAAGATTA+AGG | + | chr1_2:61288201-61288220 | Msa0082420:intron | 30.0% | |
| TGGTTAGATGGTAAGATTAA+GGG | + | chr1_2:61288202-61288221 | Msa0082420:intron | 30.0% | |
| ATGGTAAGATTAAGGGATTT+GGG | + | chr1_2:61288209-61288228 | Msa0082420:intron | 30.0% | |
| TACTGGTATGCTTGATTTAT+AGG | + | chr1_2:61288336-61288355 | Msa0082420:intron | 30.0% | |
| ACTGGTATGCTTGATTTATA+GGG | + | chr1_2:61288337-61288356 | Msa0082420:intron | 30.0% | |
| !! | ATTGGTTTGATAAACATGCA+TGG | + | chr1_2:61288488-61288507 | Msa0082420:intron | 30.0% |
| ATCAGAACTTCAGAAGAAAA+TGG | + | chr1_2:61288511-61288530 | Msa0082420:intron | 30.0% | |
| ACTTCAGAAGAAAATGGTAT+AGG | + | chr1_2:61288517-61288536 | Msa0082420:intron | 30.0% | |
| !!! | AGCAGAAGAATTGTTTTTGA+AGG | + | chr1_2:61288581-61288600 | Msa0082420:intron | 30.0% |
| !! | ACTGTTAAGTGCTATTTAGA+CGG | + | chr1_2:61288615-61288634 | Msa0082420:intron | 30.0% |
| !! | ATTGTAGAATTTGTTGCACA+AGG | + | chr1_2:61288699-61288718 | Msa0082420:intron | 30.0% |
| ACTTCACTAATTAACTCTGA+TGG | - | chr1_2:61288739-61288758 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGGGTACAGATT+GGG | + | chr1_2:61288939-61288958 | Msa0082420:intron | 30.0% |
| !! | TTATTTTATTCAGTGTGCGA+TGG | + | chr1_2:61289025-61289044 | Msa0082420:intron | 30.0% |
| ! | TATTTTATTCAGTGTGCGAT+GGG | + | chr1_2:61289026-61289045 | Msa0082420:intron | 30.0% |
| TTCTGACATTTCATTGAGAA+GGG | - | chr1_2:61289065-61289084 | None:intergenic | 30.0% | |
| TTTCTGACATTTCATTGAGA+AGG | - | chr1_2:61289066-61289085 | None:intergenic | 30.0% | |
| CAATGAAATGTCAGAAATAG+TGG | + | chr1_2:61289069-61289088 | Msa0082420:CDS | 30.0% | |
| TCAACATGAGAATGTACTTT+CGG | - | chr1_2:61289150-61289169 | None:intergenic | 30.0% | |
| AAGTACATTCTCATGTTGAA+AGG | + | chr1_2:61289151-61289170 | Msa0082420:CDS | 30.0% | |
| CAGATTCATTATTCTAAGCA+AGG | + | chr1_2:61289375-61289394 | Msa0082420:intron | 30.0% | |
| TGGCATTACATATCAATCTA+AGG | + | chr1_2:61289469-61289488 | Msa0082420:CDS | 30.0% | |
| GGCATTACATATCAATCTAA+GGG | + | chr1_2:61289470-61289489 | Msa0082420:CDS | 30.0% | |
| ! | TTTTGTGGAACCATAAAACT+AGG | - | chr1_2:61289772-61289791 | None:intergenic | 30.0% |
| ! | AGAAAAGTATACCGATAATG+TGG | - | chr1_2:61289912-61289931 | None:intergenic | 30.0% |
| CATCTGTTACTATTGTTGAT+GGG | + | chr1_2:61290088-61290107 | Msa0082420:CDS | 30.0% | |
| AAATTAACAGGCCTTAACAA+AGG | - | chr1_2:61290364-61290383 | None:intergenic | 30.0% | |
| GAAGCTAAACAATTACAGAA+GGG | - | chr1_2:61290428-61290447 | None:intergenic | 30.0% | |
| AGAAGCTAAACAATTACAGA+AGG | - | chr1_2:61290429-61290448 | None:intergenic | 30.0% | |
| ! | TTCTGTAATTGTTTAGCTTC+TGG | + | chr1_2:61290428-61290447 | Msa0082420:intron | 30.0% |
| GCTGAATAAGTATAATTGAG+CGG | + | chr1_2:61290516-61290535 | Msa0082420:intron | 30.0% | |
| ! | CATTTTCACAAGATTGTTGA+AGG | + | chr1_2:61291066-61291085 | Msa0082420:three_prime_UTR | 30.0% |
| !! | ACCTTAAGGCCATTTATTTT+TGG | + | chr1_2:61291141-61291160 | Msa0082420:three_prime_UTR | 30.0% |
| ATGAACAAGGAAGAAAGGAT+GGG | - | chr1_2:61286904-61286923 | None:intergenic | 35.0% | |
| TATGAACAAGGAAGAAAGGA+TGG | - | chr1_2:61286905-61286924 | None:intergenic | 35.0% | |
| TTGAATGAAGGAACCTGAAT+TGG | - | chr1_2:61287304-61287323 | None:intergenic | 35.0% | |
| TTTGACACGTGATTCATGAT+TGG | + | chr1_2:61287364-61287383 | Msa0082420:intron | 35.0% | |
| ACTATTATCAATTTGTGGGG+AGG | + | chr1_2:61287561-61287580 | Msa0082420:intron | 35.0% | |
| CTATTATCAATTTGTGGGGA+GGG | + | chr1_2:61287562-61287581 | Msa0082420:intron | 35.0% | |
| TATTATCAATTTGTGGGGAG+GGG | + | chr1_2:61287563-61287582 | Msa0082420:intron | 35.0% | |
| ! | GTTGGTAAATGATAACCTCT+TGG | - | chr1_2:61287854-61287873 | None:intergenic | 35.0% |
| TTGAGTACTCGAAATTGTCA+AGG | + | chr1_2:61287941-61287960 | Msa0082420:intron | 35.0% | |
| TGAGTACTCGAAATTGTCAA+GGG | + | chr1_2:61287942-61287961 | Msa0082420:intron | 35.0% | |
| !!! | GATGGTTGTTTTAAAATGGC+TGG | + | chr1_2:61287969-61287988 | Msa0082420:intron | 35.0% |
| AAATGATCGCTGCTGTTATT+TGG | - | chr1_2:61288012-61288031 | None:intergenic | 35.0% | |
| !! | GTGGAGTGTTTTGTAATAAG+AGG | + | chr1_2:61288133-61288152 | Msa0082420:intron | 35.0% |
| ! | GAGTGTTTTGTAATAAGAGG+AGG | + | chr1_2:61288136-61288155 | Msa0082420:intron | 35.0% |
| ATGGTGTGAAATTGGTTAGA+TGG | + | chr1_2:61288190-61288209 | Msa0082420:intron | 35.0% | |
| GATGGTAAGATTAAGGGATT+TGG | + | chr1_2:61288208-61288227 | Msa0082420:intron | 35.0% | |
| CAGTGAATTTGAAAACCACT+GGG | - | chr1_2:61288245-61288264 | None:intergenic | 35.0% | |
| AGAAAATAGTAGCAGGGATT+TGG | + | chr1_2:61288280-61288299 | Msa0082420:intron | 35.0% | |
| TTTCTGCATAACAGTCATAC+TGG | + | chr1_2:61288319-61288338 | Msa0082420:intron | 35.0% | |
| CTGGTATGCTTGATTTATAG+GGG | + | chr1_2:61288338-61288357 | Msa0082420:intron | 35.0% | |
| GTTATGAAGCTATACCGTTA+AGG | + | chr1_2:61288366-61288385 | Msa0082420:intron | 35.0% | |
| ! | TGAGTGTTACTCGTCTTAAT+TGG | + | chr1_2:61288470-61288489 | Msa0082420:intron | 35.0% |
| !! | CTGTTAAGTGCTATTTAGAC+GGG | + | chr1_2:61288616-61288635 | Msa0082420:intron | 35.0% |
| TCACTAATTAACTCTGATGG+AGG | - | chr1_2:61288736-61288755 | None:intergenic | 35.0% | |
| ATTTAGTCACTGAAGCTGAA+GGG | - | chr1_2:61288832-61288851 | None:intergenic | 35.0% | |
| AATTTAGTCACTGAAGCTGA+AGG | - | chr1_2:61288833-61288852 | None:intergenic | 35.0% | |
| ! | CATTTTCTTTGGGTACAGAT+TGG | + | chr1_2:61288938-61288957 | Msa0082420:intron | 35.0% |
| ! | TTTTCTTTGGGTACAGATTG+GGG | + | chr1_2:61288940-61288959 | Msa0082420:intron | 35.0% |
| ATTGAGAAGGGAAGGAAAAA+AGG | - | chr1_2:61289053-61289072 | None:intergenic | 35.0% | |
| AATTTCCTTGTGCATAGTCT+GGG | - | chr1_2:61289421-61289440 | None:intergenic | 35.0% | |
| AACTAAAGACAAGTCAAGGA+AGG | + | chr1_2:61289494-61289513 | Msa0082420:CDS | 35.0% | |
| AAGGCAACCACATTATTCAA+TGG | + | chr1_2:61289513-61289532 | Msa0082420:CDS | 35.0% | |
| ACAGCATCCATTGAATAATG+TGG | - | chr1_2:61289523-61289542 | None:intergenic | 35.0% | |
| !! | TCTGACTTGCTCTATATGTT+TGG | + | chr1_2:61289611-61289630 | Msa0082420:CDS | 35.0% |
| ! | TCTGTACATGACTCTCATTT+TGG | + | chr1_2:61289673-61289692 | Msa0082420:intron | 35.0% |
| TTGAACAACATAAGGAGATC+TGG | - | chr1_2:61289863-61289882 | None:intergenic | 35.0% | |
| !! | GTGAAAGTGTCTCTCTTATA+AGG | + | chr1_2:61289934-61289953 | Msa0082420:intron | 35.0% |
| GCATCTGTTACTATTGTTGA+TGG | + | chr1_2:61290087-61290106 | Msa0082420:CDS | 35.0% | |
| !! | TACTATTGTTGATGGGCTTA+AGG | + | chr1_2:61290095-61290114 | Msa0082420:CDS | 35.0% |
| TAATGAGATCCTACTGCATA+TGG | - | chr1_2:61290166-61290185 | None:intergenic | 35.0% | |
| TTCAAAGACCAATTGAGCTT+AGG | - | chr1_2:61290309-61290328 | None:intergenic | 35.0% | |
| TTATACTGTTTATGACAGGC+AGG | + | chr1_2:61290638-61290657 | Msa0082420:intron | 35.0% | |
| GATCGAAAACAGACTCTAAA+TGG | - | chr1_2:61290779-61290798 | None:intergenic | 35.0% | |
| ! | GTTTTCGATCCTCTTAATTG+TGG | + | chr1_2:61290789-61290808 | Msa0082420:intron | 35.0% |
| TCAATATGTTTACAGCTGCA+AGG | + | chr1_2:61290864-61290883 | Msa0082420:intron | 35.0% | |
| ACCAGAATCGATCAAAGTAA+AGG | + | chr1_2:61291098-61291117 | Msa0082420:three_prime_UTR | 35.0% | |
| ! | GCCAAAAATAAATGGCCTTA+AGG | - | chr1_2:61291145-61291164 | None:intergenic | 35.0% |
| ! | ATCATACATGTTTTGTCCTG+TGG | - | chr1_2:61291250-61291269 | None:intergenic | 35.0% |
| TGAACAAGGAAGAAAGGATG+GGG | - | chr1_2:61286903-61286922 | None:intergenic | 40.0% | |
| GCTTCTTGAATCCAACTACA+GGG | - | chr1_2:61287075-61287094 | None:intergenic | 40.0% | |
| AGCTTCTTGAATCCAACTAC+AGG | - | chr1_2:61287076-61287095 | None:intergenic | 40.0% | |
| ATTGATCAGGACAAGGTTTG+TGG | - | chr1_2:61287138-61287157 | None:intergenic | 40.0% | |
| ATTATCAATTTGTGGGGAGG+GGG | + | chr1_2:61287564-61287583 | Msa0082420:intron | 40.0% | |
| ATTCACTAGTACTGTGGCAA+AGG | + | chr1_2:61287615-61287634 | Msa0082420:intron | 40.0% | |
| ATGTGTACAAGATGCATGGA+GGG | + | chr1_2:61287653-61287672 | Msa0082420:intron | 40.0% | |
| TTCTCAGGCACATACAAGTA+AGG | - | chr1_2:61287700-61287719 | None:intergenic | 40.0% | |
| TACTTGTATGTGCCTGAGAA+TGG | + | chr1_2:61287700-61287719 | Msa0082420:intron | 40.0% | |
| AGAATATGAGAATGGACGTG+TGG | + | chr1_2:61287767-61287786 | Msa0082420:intron | 40.0% | |
| AGGCAGTGTATAAGGAGATA+TGG | + | chr1_2:61287827-61287846 | Msa0082420:intron | 40.0% | |
| GGCAGTGTATAAGGAGATAT+GGG | + | chr1_2:61287828-61287847 | Msa0082420:intron | 40.0% | |
| GATCATTTCACTCTGATTGC+AGG | + | chr1_2:61288024-61288043 | Msa0082420:intron | 40.0% | |
| !! | TGATTGCAGGACTGTTTTGA+GGG | + | chr1_2:61288037-61288056 | Msa0082420:intron | 40.0% |
| ATTTGCAAAGTAAGGCATGG+TGG | + | chr1_2:61288114-61288133 | Msa0082420:intron | 40.0% | |
| ! | AGAGGAGGATGTAATTTTCG+TGG | + | chr1_2:61288151-61288170 | Msa0082420:intron | 40.0% |
| GCAGTGAATTTGAAAACCAC+TGG | - | chr1_2:61288246-61288265 | None:intergenic | 40.0% | |
| TTCAAATTCACTGCTATGCC+TGG | + | chr1_2:61288252-61288271 | Msa0082420:intron | 40.0% | |
| TCAAATTCACTGCTATGCCT+GGG | + | chr1_2:61288253-61288272 | Msa0082420:intron | 40.0% | |
| GGCTTGAGAAAATAGTAGCA+GGG | + | chr1_2:61288274-61288293 | Msa0082420:intron | 40.0% | |
| AAATAGTAGCAGGGATTTGG+TGG | + | chr1_2:61288283-61288302 | Msa0082420:intron | 40.0% | |
| TTCGACCTGTCTACAAAAAC+TGG | - | chr1_2:61288410-61288429 | None:intergenic | 40.0% | |
| TTTCTTTGGGTACAGATTGG+GGG | + | chr1_2:61288941-61288960 | Msa0082420:intron | 40.0% | |
| ! | ATTACACCGTGTTAGCTTAG+AGG | - | chr1_2:61289006-61289025 | None:intergenic | 40.0% |
| GACATTTCATTGAGAAGGGA+AGG | - | chr1_2:61289061-61289080 | None:intergenic | 40.0% | |
| GAATTTCCTTGTGCATAGTC+TGG | - | chr1_2:61289422-61289441 | None:intergenic | 40.0% | |
| GGGAAACTAAAGACAAGTCA+AGG | + | chr1_2:61289490-61289509 | Msa0082420:CDS | 40.0% | |
| TGGATGCTGTCTCACATTTA+AGG | + | chr1_2:61289533-61289552 | Msa0082420:CDS | 40.0% | |
| TGCTGTCTCACATTTAAGGA+TGG | + | chr1_2:61289537-61289556 | Msa0082420:CDS | 40.0% | |
| !!! | GTAAACCAGGCCTAGTTTTA+TGG | + | chr1_2:61289759-61289778 | Msa0082420:intron | 40.0% |
| CACAACTGTAGCAGAATATG+TGG | - | chr1_2:61290056-61290075 | None:intergenic | 40.0% | |
| AATTTGCCCGACCTTTGTTA+AGG | + | chr1_2:61290350-61290369 | Msa0082420:intron | 40.0% | |
| TAACAGGCCTTAACAAAGGT+CGG | - | chr1_2:61290360-61290379 | None:intergenic | 40.0% | |
| AGACTGGGGATGTTAAGAAT+TGG | + | chr1_2:61290562-61290581 | Msa0082420:intron | 40.0% | |
| !! | TTATGAAGGTGCTGTACACT+TGG | + | chr1_2:61290664-61290683 | Msa0082420:CDS | 40.0% |
| TTCAGATGGAAAGAGTAGAG+AGG | + | chr1_2:61290905-61290924 | Msa0082420:CDS | 40.0% | |
| TCAGATGGAAAGAGTAGAGA+GGG | + | chr1_2:61290906-61290925 | Msa0082420:CDS | 40.0% | |
| TAGAGAAGCAAACCTCACTT+GGG | + | chr1_2:61290986-61291005 | Msa0082420:three_prime_UTR | 40.0% | |
| ! | GCCTTTACTTTGATCGATTC+TGG | - | chr1_2:61291102-61291121 | None:intergenic | 40.0% |
| ACTTTGGCATCTGTACCTTA+AGG | + | chr1_2:61291127-61291146 | Msa0082420:three_prime_UTR | 40.0% | |
| ATCCTAACACGAACATAGCA+AGG | + | chr1_2:61291219-61291238 | Msa0082420:three_prime_UTR | 40.0% | |
| ! | TTCCTTGCTATGTTCGTGTT+AGG | - | chr1_2:61291224-61291243 | None:intergenic | 40.0% |
| ACATAGCAAGGAAAAACCAC+AGG | + | chr1_2:61291231-61291250 | Msa0082420:three_prime_UTR | 40.0% | |
| AGGAAGAAAGGATGGGGTTT+GGG | - | chr1_2:61286897-61286916 | None:intergenic | 45.0% | |
| AAGGAAGAAAGGATGGGGTT+TGG | - | chr1_2:61286898-61286917 | None:intergenic | 45.0% | |
| AGAGAAAGAGAAACAGCGCA+CGG | - | chr1_2:61286938-61286957 | None:intergenic | 45.0% | |
| GAAGTTCTGCAAGACCTATC+AGG | + | chr1_2:61287018-61287037 | Msa0082420:CDS | 45.0% | |
| AGCTCGCATGTATTCCTGAT+AGG | - | chr1_2:61287035-61287054 | None:intergenic | 45.0% | |
| GATGTGTACAAGATGCATGG+AGG | + | chr1_2:61287652-61287671 | Msa0082420:intron | 45.0% | |
| GAGGAGGGAGTCATTTCATT+TGG | + | chr1_2:61287728-61287747 | Msa0082420:intron | 45.0% | |
| ATATGAGAATGGACGTGTGG+AGG | + | chr1_2:61287770-61287789 | Msa0082420:intron | 45.0% | |
| AGATGGGATCTACTCTGTGA+AGG | + | chr1_2:61287807-61287826 | Msa0082420:intron | 45.0% | |
| CTCTGTGAAGGCAGTGTATA+AGG | + | chr1_2:61287819-61287838 | Msa0082420:intron | 45.0% | |
| ATAAGGAGATATGGGCCAAG+AGG | + | chr1_2:61287836-61287855 | Msa0082420:intron | 45.0% | |
| !! | GAAATTGTCAAGGGTGTCGA+TGG | + | chr1_2:61287951-61287970 | Msa0082420:intron | 45.0% |
| ! | GCTGCTGTTATTTGGTAGCA+CGG | - | chr1_2:61288004-61288023 | None:intergenic | 45.0% |
| ! | CTGATTGCAGGACTGTTTTG+AGG | + | chr1_2:61288036-61288055 | Msa0082420:intron | 45.0% |
| ! | GGAGGATGTAATTTTCGTGG+TGG | + | chr1_2:61288154-61288173 | Msa0082420:intron | 45.0% |
| ! | GCTACTATTTTCTCAAGCCC+AGG | - | chr1_2:61288273-61288292 | None:intergenic | 45.0% |
| GGGCTTGAGAAAATAGTAGC+AGG | + | chr1_2:61288273-61288292 | Msa0082420:intron | 45.0% | |
| TGCTTGATTTATAGGGGCTG+CGG | + | chr1_2:61288344-61288363 | Msa0082420:intron | 45.0% | |
| TGAAGCTATACCGTTAAGGC+TGG | + | chr1_2:61288370-61288389 | Msa0082420:intron | 45.0% | |
| GAAGCTATACCGTTAAGGCT+GGG | + | chr1_2:61288371-61288390 | Msa0082420:intron | 45.0% | |
| ! | CGTTGCCAGTTTTTGTAGAC+AGG | + | chr1_2:61288402-61288421 | Msa0082420:intron | 45.0% |
| TTTGTAGACAGGTCGAACCT+TGG | + | chr1_2:61288413-61288432 | Msa0082420:intron | 45.0% | |
| ! | CGTGTTAGCTTAGAGGTAGT+GGG | - | chr1_2:61288999-61289018 | None:intergenic | 45.0% |
| CCACTACCTCTAAGCTAACA+CGG | + | chr1_2:61288997-61289016 | Msa0082420:intron | 45.0% | |
| AGGAAATTCTTCAGAGTCCC+TGG | + | chr1_2:61289433-61289452 | Msa0082420:CDS | 45.0% | |
| AAGAGCTCACAAGCAAGTGA+TGG | - | chr1_2:61289567-61289586 | None:intergenic | 45.0% | |
| TGGAACCATAAAACTAGGCC+TGG | - | chr1_2:61289767-61289786 | None:intergenic | 45.0% | |
| TAATGTGGAACTGCGCCAAT+TGG | - | chr1_2:61289897-61289916 | None:intergenic | 45.0% | |
| TTGGCGCAGTTCCACATTAT+CGG | + | chr1_2:61289898-61289917 | Msa0082420:intron | 45.0% | |
| !! | TAATCTGGCTCTTCCATGAC+AGG | + | chr1_2:61289996-61290015 | Msa0082420:intron | 45.0% |
| TCAAACACTGTGTCCTGTCA+TGG | - | chr1_2:61290012-61290031 | None:intergenic | 45.0% | |
| ! | GATCCAGTTTCTCTGACTTG+TGG | + | chr1_2:61290030-61290049 | Msa0082420:CDS | 45.0% |
| AAAATGTCCTATGTGCCGAG+AGG | + | chr1_2:61290134-61290153 | Msa0082420:CDS | 45.0% | |
| TGCATATGGTAGCTACCTCT+CGG | - | chr1_2:61290152-61290171 | None:intergenic | 45.0% | |
| AGGTAGCTACCATATGCAGT+AGG | + | chr1_2:61290154-61290173 | Msa0082420:intron | 45.0% | |
| GCAGTAGGATCTCATTAGAG+TGG | + | chr1_2:61290169-61290188 | Msa0082420:intron | 45.0% | |
| GATCCTGTCCTAAGCTCAAT+TGG | + | chr1_2:61290298-61290317 | Msa0082420:intron | 45.0% | |
| AGACCAATTGAGCTTAGGAC+AGG | - | chr1_2:61290304-61290323 | None:intergenic | 45.0% | |
| AACAGGCCTTAACAAAGGTC+GGG | - | chr1_2:61290359-61290378 | None:intergenic | 45.0% | |
| TGACAGGCAGGAGTTTATGA+AGG | + | chr1_2:61290650-61290669 | Msa0082420:intron | 45.0% | |
| ! | TTTACAGCTGCAAGGAGTAC+TGG | + | chr1_2:61290872-61290891 | Msa0082420:intron | 45.0% |
| !! | TTACAGCTGCAAGGAGTACT+GGG | + | chr1_2:61290873-61290892 | Msa0082420:intron | 45.0% |
| GTAGAGAAGCAAACCTCACT+TGG | + | chr1_2:61290985-61291004 | Msa0082420:three_prime_UTR | 45.0% | |
| CAAACCTCACTTGGGTTCAA+TGG | + | chr1_2:61290994-61291013 | Msa0082420:three_prime_UTR | 45.0% | |
| TACACCATTGAACCCAAGTG+AGG | - | chr1_2:61291001-61291020 | None:intergenic | 45.0% | |
| GCTGGATAATGCATTCTCTC+TGG | - | chr1_2:61291197-61291216 | None:intergenic | 45.0% | |
| ATGTTCGTGTTAGGATACGC+TGG | - | chr1_2:61291215-61291234 | None:intergenic | 45.0% | |
| !!! | ATTATTTTGTTTTAATTTTA+CGG | + | chr1_2:61287193-61287212 | Msa0082420:intron | 5.0% |
| TCAGGAATACATGCGAGCTC+AGG | + | chr1_2:61287036-61287055 | Msa0082420:CDS | 50.0% | |
| CAGAAGAAGCTCCCTGTAGT+TGG | + | chr1_2:61287061-61287080 | Msa0082420:CDS | 50.0% | |
| !! | CATGGGCATTGATCAGGACA+AGG | - | chr1_2:61287145-61287164 | None:intergenic | 50.0% |
| !! | GACGTACATGGGCATTGATC+AGG | - | chr1_2:61287151-61287170 | None:intergenic | 50.0% |
| !! | ATGGGTTCGGTGACGTACAT+GGG | - | chr1_2:61287162-61287181 | None:intergenic | 50.0% |
| GCGGATGTGTACAAGATGCA+TGG | + | chr1_2:61287649-61287668 | Msa0082420:intron | 50.0% | |
| TATGTGCCTGAGAATGGAGC+TGG | + | chr1_2:61287706-61287725 | Msa0082420:intron | 50.0% | |
| TTGGGTATGACATCTCCCAG+TGG | + | chr1_2:61288227-61288246 | Msa0082420:intron | 50.0% | |
| ACAGGTCGAACCTTGGTTTC+TGG | + | chr1_2:61288420-61288439 | Msa0082420:intron | 50.0% | |
| !! | ACCTTGGTTTCTGGCATCAG+TGG | + | chr1_2:61288429-61288448 | Msa0082420:intron | 50.0% |
| TCCACTGATGCCAGAAACCA+AGG | - | chr1_2:61288433-61288452 | None:intergenic | 50.0% | |
| TGGCATCAGTGGAAGTGAGA+TGG | + | chr1_2:61288440-61288459 | Msa0082420:intron | 50.0% | |
| CATCAGTGGAAGTGAGATGG+TGG | + | chr1_2:61288443-61288462 | Msa0082420:intron | 50.0% | |
| !! | AGTGGAAGTGAGATGGTGGA+GGG | + | chr1_2:61288447-61288466 | Msa0082420:intron | 50.0% |
| ! | AGCTGAAGGGTCGGTCATTT+TGG | - | chr1_2:61288819-61288838 | None:intergenic | 50.0% |
| AGTCACTGAAGCTGAAGGGT+CGG | - | chr1_2:61288828-61288847 | None:intergenic | 50.0% | |
| ! | CCGTGTTAGCTTAGAGGTAG+TGG | - | chr1_2:61289000-61289019 | None:intergenic | 50.0% |
| CTGGAACGACATCTTGCTTC+TGG | + | chr1_2:61289121-61289140 | Msa0082420:CDS | 50.0% | |
| ACAAGCCCAGACTATGCACA+AGG | + | chr1_2:61289413-61289432 | Msa0082420:CDS | 50.0% | |
| TCCCTGGCTTATTGAGCTGA+TGG | + | chr1_2:61289449-61289468 | Msa0082420:CDS | 50.0% | |
| GCCATCAGCTCAATAAGCCA+GGG | - | chr1_2:61289453-61289472 | None:intergenic | 50.0% | |
| TGCCATCAGCTCAATAAGCC+AGG | - | chr1_2:61289454-61289473 | None:intergenic | 50.0% | |
| TGGAACTGCGCCAATTGGTT+AGG | - | chr1_2:61289892-61289911 | None:intergenic | 50.0% | |
| TGGCCACAAGTCAGAGAAAC+TGG | - | chr1_2:61290036-61290055 | None:intergenic | 50.0% | |
| TGTGCATCAGACCAAGAACC+AGG | + | chr1_2:61290276-61290295 | Msa0082420:intron | 50.0% | |
| ! | TAGGACAGGATCCTGGTTCT+TGG | - | chr1_2:61290290-61290309 | None:intergenic | 50.0% |
| TTGAGCTTAGGACAGGATCC+TGG | - | chr1_2:61290297-61290316 | None:intergenic | 50.0% | |
| CTGGGAGGAAAGACTTCAGA+TGG | + | chr1_2:61290891-61290910 | Msa0082420:CDS | 50.0% | |
| AGAGAGGGTCAAGCAAGCAA+AGG | + | chr1_2:61290921-61290940 | Msa0082420:CDS | 50.0% | |
| ! | TCAAGCAAGCAAAGGAGCAC+TGG | + | chr1_2:61290929-61290948 | Msa0082420:CDS | 50.0% |
| !! | CAAGCAAGCAAAGGAGCACT+GGG | + | chr1_2:61290930-61290949 | Msa0082420:CDS | 50.0% |
| ! | AACGCAGTGTAGAGCGTTCA+TGG | + | chr1_2:61290954-61290973 | Msa0082420:CDS | 50.0% |
| ! | ACGCAGTGTAGAGCGTTCAT+GGG | + | chr1_2:61290955-61290974 | Msa0082420:CDS | 50.0% |
| !! | GATGGGTTCGGTGACGTACA+TGG | - | chr1_2:61287163-61287182 | None:intergenic | 55.0% |
| GGCAAAGGATGCAGCAGTAG+CGG | + | chr1_2:61287630-61287649 | Msa0082420:intron | 55.0% | |
| CTGAGAATGGAGCTGGAGGA+GGG | + | chr1_2:61287713-61287732 | Msa0082420:intron | 55.0% | |
| TGAGAATGGACGTGTGGAGG+TGG | + | chr1_2:61287773-61287792 | Msa0082420:intron | 55.0% | |
| AATGGACGTGTGGAGGTGGT+TGG | + | chr1_2:61287777-61287796 | Msa0082420:intron | 55.0% | |
| AGGTGGTTGGAAGAGGCAGA+TGG | + | chr1_2:61287790-61287809 | Msa0082420:intron | 55.0% | |
| GGTGGTTGGAAGAGGCAGAT+GGG | + | chr1_2:61287791-61287810 | Msa0082420:intron | 55.0% | |
| !! | AGTAGCAGGGATTTGGTGGC+AGG | + | chr1_2:61288287-61288306 | Msa0082420:intron | 55.0% |
| !! | GTAGCAGGGATTTGGTGGCA+GGG | + | chr1_2:61288288-61288307 | Msa0082420:intron | 55.0% |
| ! | GAGCTTGCTCCCAGCCTTAA+CGG | - | chr1_2:61288383-61288402 | None:intergenic | 55.0% |
| ! | CAGTGGAAGTGAGATGGTGG+AGG | + | chr1_2:61288446-61288465 | Msa0082420:intron | 55.0% |
| TCAGCGTGCACAGAAACTGC+TGG | + | chr1_2:61289102-61289121 | Msa0082420:CDS | 55.0% | |
| GTAGCTACCTCTCGGCACAT+AGG | - | chr1_2:61290144-61290163 | None:intergenic | 55.0% | |
| GTGCCTGAGAATGGAGCTGG+AGG | + | chr1_2:61287709-61287728 | Msa0082420:intron | 60.0% | |
| CCTCCTCCAGCTCCATTCTC+AGG | - | chr1_2:61287715-61287734 | None:intergenic | 60.0% | |
| CCTGAGAATGGAGCTGGAGG+AGG | + | chr1_2:61287712-61287731 | Msa0082420:intron | 60.0% | |
| CGTGTGGAGGTGGTTGGAAG+AGG | + | chr1_2:61287783-61287802 | Msa0082420:intron | 60.0% | |
| !! | AGGGATTTGGTGGCAGGGCT+TGG | + | chr1_2:61288293-61288312 | Msa0082420:intron | 60.0% |
| !! | CAGCTGCAAGGAGTACTGGG+AGG | + | chr1_2:61290876-61290895 | Msa0082420:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 61286839 | 61291304 | 61286839 | ID=Msa0082420;Name=Msa0082420 |
| chr1_2 | mRNA | 61286839 | 61291304 | 61286839 | ID=Msa0082420-mRNA-1;Parent=Msa0082420;Name=Msa0082420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=177|0.8|0.83|1|0.8|0.83|6|320|311 |
| chr1_2 | exon | 61286839 | 61287163 | 61286839 | ID=Msa0082420-mRNA-1:exon:20277;Parent=Msa0082420-mRNA-1 |
| chr1_2 | exon | 61289038 | 61289282 | 61289038 | ID=Msa0082420-mRNA-1:exon:20278;Parent=Msa0082420-mRNA-1 |
| chr1_2 | exon | 61289393 | 61289632 | 61289393 | ID=Msa0082420-mRNA-1:exon:20279;Parent=Msa0082420-mRNA-1 |
| chr1_2 | exon | 61290018 | 61290155 | 61290018 | ID=Msa0082420-mRNA-1:exon:20280;Parent=Msa0082420-mRNA-1 |
| chr1_2 | exon | 61290656 | 61290714 | 61290656 | ID=Msa0082420-mRNA-1:exon:20281;Parent=Msa0082420-mRNA-1 |
| chr1_2 | exon | 61290879 | 61291304 | 61290879 | ID=Msa0082420-mRNA-1:exon:20282;Parent=Msa0082420-mRNA-1 |
| chr1_2 | five_prime_UTR | 61286839 | 61287015 | 61286839 | ID=Msa0082420-mRNA-1:five_prime_utr;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61287016 | 61287163 | 61287016 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61289038 | 61289282 | 61289038 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61289393 | 61289632 | 61289393 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61290018 | 61290155 | 61290018 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61290656 | 61290714 | 61290656 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | CDS | 61290879 | 61290984 | 61290879 | ID=Msa0082420-mRNA-1:cds;Parent=Msa0082420-mRNA-1 |
| chr1_2 | three_prime_UTR | 61290985 | 61291304 | 61290985 | ID=Msa0082420-mRNA-1:three_prime_utr;Parent=Msa0082420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
