AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0465800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465800 MtrunA17_Chr3g0116171 90.492 915 31 3 1 907 1 867 0.0 1659
Msa0465800 MtrunA17_Chr4g0057731 76.955 716 104 6 18 724 21 684 0.0 1088
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465800 AT5G63420.1 64.461 937 245 11 1 906 32 911 0.0 1143

Find 246 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGACATTTACACATTTA+TGG 0.143360 3_3:+66262128 None:intergenic
TCCAAAAGATGCAAGATTTA+AGG 0.149877 3_3:+66266625 None:intergenic
GCCTTAAATCTTGCATCTTT+TGG 0.181875 3_3:-66266626 Msa0465800:CDS
TTGGCTGGAAACACCTTAAA+AGG 0.186376 3_3:-66264999 Msa0465800:CDS
TATTTGTTGGCATGTCTTTA+AGG 0.202740 3_3:-66267706 Msa0465800:CDS
CAGGGGAATCGGATGAATTT+TGG 0.207468 3_3:-66263842 Msa0465800:CDS
GGGCAGAATAAGAAATATTT+TGG 0.234453 3_3:-66262497 Msa0465800:three_prime_UTR
CAAATCTTTGTGGACATCTT+TGG 0.240355 3_3:-66263496 Msa0465800:CDS
CCTTAGCCCTAAAAGAATTA+TGG 0.243849 3_3:+66262354 None:intergenic
ATCCATGGATGAACATAAAA+AGG 0.267555 3_3:-66264685 Msa0465800:CDS
ATTGGTGGTTTGGGTGAAAT+TGG 0.278425 3_3:-66270735 Msa0465800:CDS
GATTCACTGGTTGTCCTTCC+AGG 0.285382 3_3:+66267964 None:intergenic
CAAGTGATTCATGCTCCTTC+AGG 0.286343 3_3:+66265551 None:intergenic
TTTCTTATAAATGTTGTATC+AGG 0.286634 3_3:+66270326 None:intergenic
TTCATTCAGTGGATTGGTTT+TGG 0.292432 3_3:+66271218 None:intergenic
CCATTACGTGTTCTTCCTAT+TGG 0.296621 3_3:-66270753 Msa0465800:CDS
GAAGGCGATTTATCTGATTC+AGG 0.300145 3_3:-66263861 Msa0465800:CDS
AAAGCTGCTGCCGATTTAAC+TGG 0.300725 3_3:-66267844 Msa0465800:CDS
ATACAACATTTATAAGAAAA+TGG 0.305949 3_3:-66270322 Msa0465800:CDS
CCTTGGAAAAGAAAATTTAC+AGG 0.307438 3_3:-66265318 Msa0465800:intron
AAGGTAATAGGCAACATAAA+AGG 0.316546 3_3:-66262335 Msa0465800:three_prime_UTR
GTGAGGAAGTGGAGGGAGGG+AGG 0.319906 3_3:+66271091 None:intergenic
CTATCAAGGGAAAGAGTATA+TGG 0.320547 3_3:-66262283 Msa0465800:three_prime_UTR
ATCCATCATTTACATGGTTC+TGG 0.325333 3_3:-66262403 Msa0465800:three_prime_UTR
TGTAGGCAAGTCACTGGTTA+TGG 0.341707 3_3:-66267443 Msa0465800:CDS
GGGAGTGAGGAAGTGGAGGG+AGG 0.343042 3_3:+66271087 None:intergenic
GAGAGGAGGGAGTGAGGAAG+TGG 0.344758 3_3:+66271080 None:intergenic
GATGTAGATTTGATGCAAAC+TGG 0.345615 3_3:+66267881 None:intergenic
TGAAAGGAAGGATGGCTCTC+TGG 0.354049 3_3:-66263575 Msa0465800:CDS
CTTCTAAATGTTGATATTCC+AGG 0.354594 3_3:+66264708 None:intergenic
AATAGAAGGGTTCTTTCTAA+TGG 0.365515 3_3:-66265350 Msa0465800:CDS
TGTTCTTCCTATTGGTGGTT+TGG 0.367711 3_3:-66270745 Msa0465800:CDS
ATCTTTGGCACTTAAATATG+AGG 0.370175 3_3:-66263481 Msa0465800:intron
CGGAGGGAGAGGAGGGAGTG+AGG 0.374912 3_3:+66271074 None:intergenic
ATCATATCGGTGCGTTGCCT+TGG 0.376836 3_3:-66270256 Msa0465800:CDS
TTATTATATCAGGTATTTGT+TGG 0.378839 3_3:-66267719 Msa0465800:intron
ATCGCAATGGCAATTACTTC+GGG 0.381041 3_3:+66264798 None:intergenic
ATTTCCATTCAATTTGTTGC+CGG 0.381999 3_3:+66262525 None:intergenic
GTTCTTCCTATTGGTGGTTT+GGG 0.382494 3_3:-66270744 Msa0465800:CDS
TTTCACACTTGAGAAATAGA+AGG 0.384172 3_3:-66265364 Msa0465800:CDS
GCATTTATTACCAGAGTTGA+TGG 0.385749 3_3:+66267638 None:intergenic
ATGCACCAGGTTATTAAGAA+TGG 0.386575 3_3:-66265401 Msa0465800:intron
TTGTTTGCAGTGTGGTGGAC+TGG 0.387215 3_3:+66264658 None:intergenic
TTCCCTTGATAGCTTAGCTT+GGG 0.391980 3_3:+66262294 None:intergenic
AATATACATAGAACACTAAC+GGG 0.401800 3_3:-66261999 None:intergenic
CAACTTTCTCCCAGTTAAAT+CGG 0.401807 3_3:+66267834 None:intergenic
TGAATCTCCTGTTGCTGAAA+AGG 0.403407 3_3:-66268703 Msa0465800:CDS
CTAGTTCTTCGTTGTTCTGA+TGG 0.406463 3_3:-66268803 Msa0465800:CDS
TAGATGGCATCATTGTGATT+AGG 0.412496 3_3:-66265132 Msa0465800:intron
AATGAAAACTTACACACATC+TGG 0.415170 3_3:-66266267 Msa0465800:CDS
AGAATGAGAATTGCATTAGA+TGG 0.417290 3_3:-66265148 Msa0465800:CDS
TAACCCAAGCTAAGCTATCA+AGG 0.419408 3_3:-66262297 Msa0465800:three_prime_UTR
ATTGGATCAACAATAGTTAT+GGG 0.421279 3_3:-66266294 Msa0465800:CDS
GGCAAATCCCACGTTGGTCC+TGG 0.424025 3_3:-66264726 Msa0465800:CDS
GATTGGATCAACAATAGTTA+TGG 0.427638 3_3:-66266295 Msa0465800:CDS
TTTCCCTTGATAGCTTAGCT+TGG 0.427851 3_3:+66262293 None:intergenic
TTTAGAGCGGAGGGAGAGGA+GGG 0.428100 3_3:+66271067 None:intergenic
AGGAGGGAGTGAGGAAGTGG+AGG 0.430363 3_3:+66271083 None:intergenic
CTATTCTTCACACTGGGGAT+TGG 0.430987 3_3:-66268778 Msa0465800:CDS
ATCACACGGGACTCATTACC+AGG 0.431628 3_3:+66266342 None:intergenic
GGAGTGAGGAAGTGGAGGGA+GGG 0.432143 3_3:+66271088 None:intergenic
GTTTAGAGCGGAGGGAGAGG+AGG 0.436100 3_3:+66271066 None:intergenic
GAATTACCACAAGATGTCTA+TGG 0.437596 3_3:-66264968 Msa0465800:CDS
ATTGGGGCGTGGGCGTGTAT+TGG 0.439664 3_3:+66262231 None:intergenic
GAGAAAGAGACCACTACAAC+TGG 0.440855 3_3:-66263888 Msa0465800:CDS
CATTTGAGATAGAACCAATC+AGG 0.444198 3_3:-66268856 Msa0465800:CDS
CTGGACAATGCAAATCTTTG+TGG 0.444645 3_3:-66263506 Msa0465800:CDS
ACATGCATATCGTGGAGAAT+TGG 0.445598 3_3:-66266244 Msa0465800:intron
GAATCACTTGGAAAATCAAC+TGG 0.447489 3_3:-66265538 Msa0465800:CDS
TCTAATGGTTTCATTTCCCT+TGG 0.447711 3_3:-66265335 Msa0465800:CDS
TATCGCAATGGCAATTACTT+CGG 0.447759 3_3:+66264797 None:intergenic
ACCAGAGTTGATGGGTCAAA+TGG 0.450689 3_3:+66267647 None:intergenic
TCATATCGGTGCGTTGCCTT+GGG 0.452996 3_3:-66270255 Msa0465800:intron
TTACGTGTTCTTCCTATTGG+TGG 0.453954 3_3:-66270750 Msa0465800:CDS
GAGATAAACACAAAATTGTC+TGG 0.454789 3_3:-66264747 Msa0465800:CDS
TTTATCTGATTCAGGGGAAT+CGG 0.455159 3_3:-66263853 Msa0465800:CDS
GTGTTGTTGATAGCGGGAAA+TGG 0.456647 3_3:+66271186 None:intergenic
AGTGATGGTGACAAAGCATT+TGG 0.457642 3_3:-66265199 Msa0465800:CDS
ATCAGACATTTCTTCAGACT+TGG 0.457953 3_3:+66263704 None:intergenic
CTGATTGGTTCTATCTCAAA+TGG 0.459887 3_3:+66268857 None:intergenic
ATTTCACCCAAACCACCAAT+AGG 0.461698 3_3:+66270738 None:intergenic
ATTGACGAGACACCACTTGA+TGG 0.463031 3_3:-66268668 Msa0465800:CDS
GTTACAATAAGCAGATCCTT+AGG 0.463234 3_3:+66266776 None:intergenic
TCAACTGATGATGCAATGAA+TGG 0.463811 3_3:+66263816 None:intergenic
GATCTGCTTATTGTAACAAC+TGG 0.465028 3_3:-66266770 Msa0465800:CDS
TCAACAAATGTGCTCTCACC+TGG 0.467892 3_3:-66267982 Msa0465800:CDS
GATGGGATCAGCAGAAGTCC+TGG 0.469354 3_3:-66263525 Msa0465800:CDS
CTTAGCTTGGGTTAGAATCA+AGG 0.471830 3_3:+66262306 None:intergenic
CCTTGGTAAGTTTGAAAGCA+TGG 0.473674 3_3:+66266597 None:intergenic
ATGAATCGCATATCAGAGAT+TGG 0.474239 3_3:-66266312 Msa0465800:CDS
TCTAATCAGGAGATCAAGAA+TGG 0.475221 3_3:-66262615 Msa0465800:intron
CGATTTAACTGGGAGAAAGT+TGG 0.476469 3_3:-66267833 Msa0465800:intron
AATCAGCTTCTTGACTTCCT+CGG 0.476513 3_3:+66263635 None:intergenic
CTCAGAGCTTGTTGGCTGAT+GGG 0.478275 3_3:-66263542 Msa0465800:CDS
CACAAAGATTTGCATTGTCC+AGG 0.480128 3_3:+66263507 None:intergenic
TCTCAGAGCTTGTTGGCTGA+TGG 0.481622 3_3:-66263543 Msa0465800:CDS
ATAGAATGAGTCACCCTGAT+TGG 0.482517 3_3:+66268842 None:intergenic
TTTCAGCAACAGGAGATTCA+AGG 0.483127 3_3:+66268706 None:intergenic
GTTCTGGTAACATGGACAAT+TGG 0.483222 3_3:-66262387 Msa0465800:three_prime_UTR
TGAAAGAGTGTTGTTGATAG+CGG 0.483236 3_3:+66271179 None:intergenic
TGAAGCTGAAACGGAGAGTC+TGG 0.484052 3_3:+66271040 None:intergenic
TTGGAAAATCAACTGGCATT+CGG 0.486197 3_3:-66265531 Msa0465800:CDS
TCATCAGGTCATCCCAGCAT+TGG 0.486824 3_3:-66269282 Msa0465800:intron
ATACAAAACAATATCTTCCT+TGG 0.488079 3_3:+66266580 None:intergenic
TCAAGAAGCTGATTGATTTG+CGG 0.490229 3_3:-66263626 Msa0465800:CDS
CAATTCTCATTCTTTCATCA+AGG 0.490742 3_3:+66265158 None:intergenic
GACAAAGCATTTGGTACATC+CGG 0.492657 3_3:-66265190 Msa0465800:CDS
ACAAAGAACAAGTTTGTCGC+TGG 0.495185 3_3:-66268881 Msa0465800:CDS
GAAAGAGTGTTGTTGATAGC+GGG 0.496926 3_3:+66271180 None:intergenic
TTGGTTTAGAGCGGAGGGAG+AGG 0.497199 3_3:+66271063 None:intergenic
GATGTCTATGGCTGGACAAA+GGG 0.497228 3_3:-66264956 Msa0465800:CDS
AAGGCGATTTATCTGATTCA+GGG 0.497243 3_3:-66263860 Msa0465800:CDS
AGGTAATAGGCAACATAAAA+GGG 0.497500 3_3:-66262334 Msa0465800:three_prime_UTR
CAAAAGTCCACTGGCTCACA+TGG 0.497633 3_3:-66264877 Msa0465800:CDS
CATACAACATTGATAGTCAT+AGG 0.497973 3_3:-66262093 Msa0465800:three_prime_UTR
CATTCTATTCCTGACTGTTG+TGG 0.499925 3_3:-66268827 Msa0465800:CDS
GTCTGGTTGGTTTAGAGCGG+AGG 0.502579 3_3:+66271057 None:intergenic
ACCTCTTGTTTGCAGTGTGG+TGG 0.502821 3_3:+66264653 None:intergenic
TTAGAAGCAGCTTGGAAGGA+TGG 0.505273 3_3:-66267677 Msa0465800:CDS
AGGCACATTTCAGCTTCAAA+AGG 0.507331 3_3:-66267919 Msa0465800:CDS
CTAGAGTACCACACAAAAGA+AGG 0.508431 3_3:-66270860 Msa0465800:CDS
GATTTAAAGTTGTGAAAGGA+AGG 0.508605 3_3:-66263587 Msa0465800:CDS
GAAAGGAAGGATGGCTCTCT+GGG 0.509095 3_3:-66263574 Msa0465800:CDS
TGAGAGTGTTGAAGCTGAAA+CGG 0.509651 3_3:+66271031 None:intergenic
ACATTTCAGCTTCAAAAGGA+AGG 0.510397 3_3:-66267915 Msa0465800:CDS
TTTACATGGTTCTGGTAACA+TGG 0.510579 3_3:-66262395 Msa0465800:three_prime_UTR
AAAAGAAGGAGAAGAATTGA+AGG 0.511278 3_3:-66270846 Msa0465800:CDS
CTGAAGGAGCATGAATCACT+TGG 0.511676 3_3:-66265550 Msa0465800:CDS
GGAGGGAGTGAGGAAGTGGA+GGG 0.514224 3_3:+66271084 None:intergenic
AACACCGGCAACAAATTGAA+TGG 0.517785 3_3:-66262529 Msa0465800:exon
AACAAGTATTCTCCATGTAC+AGG 0.517823 3_3:+66265574 None:intergenic
ACCTATGCTATGCTATGCTA+TGG 0.519733 3_3:+66271151 None:intergenic
TGGCTGGAAACACCTTAAAA+GGG 0.519920 3_3:-66264998 Msa0465800:CDS
AATGCACGAGTAGGAAATGA+TGG 0.520317 3_3:-66270891 Msa0465800:intron
AGAGATATCTCAGAGCTTGT+TGG 0.522256 3_3:-66263550 Msa0465800:CDS
TACCAGAACCATGTAAATGA+TGG 0.525460 3_3:+66262401 None:intergenic
TGCATCTTCCTTTACAATGG+AGG 0.526281 3_3:-66269240 Msa0465800:intron
TATTGATGCTTATGCACCTA+AGG 0.528326 3_3:-66266792 Msa0465800:CDS
GACAGATTTAAAGTTGTGAA+AGG 0.528331 3_3:-66263591 Msa0465800:CDS
GCTTCAACACTCTCAGCCTC+AGG 0.528459 3_3:-66271023 Msa0465800:intron
CAAGTCTGAGCTAGGTGACC+AGG 0.529734 3_3:-66262432 Msa0465800:three_prime_UTR
GCATCAAATCTACATCGGAT+TGG 0.529989 3_3:-66267874 Msa0465800:CDS
TTCATCAAGGAAGAGTTCAC+CGG 0.530019 3_3:+66265171 None:intergenic
TGAGGAAGTACAGTGGTAAA+CGG 0.530774 3_3:-66264821 Msa0465800:CDS
TCAATTTGTCAGGTTATCCC+TGG 0.531224 3_3:-66266360 Msa0465800:intron
GGACATACTTAGAAGCAGCT+TGG 0.532316 3_3:-66267685 Msa0465800:CDS
ATCAACATTTAGAAGATCCA+TGG 0.532606 3_3:-66264700 Msa0465800:CDS
TTGACGAGACACCACTTGAT+GGG 0.533040 3_3:-66268667 Msa0465800:CDS
TAAATGATGGATTATCATCC+TGG 0.533252 3_3:+66262414 None:intergenic
TCCATTTGACCCATCAACTC+TGG 0.534282 3_3:-66267648 Msa0465800:intron
AGAACTAGTCCACAACAGTC+AGG 0.535143 3_3:+66268818 None:intergenic
AGCAAATCAAGCTATCATCA+AGG 0.535154 3_3:+66262050 None:intergenic
TACCACAAGATGTCTATGGC+TGG 0.535188 3_3:-66264964 Msa0465800:CDS
TCTTCACACTGGGGATTGGA+AGG 0.536502 3_3:-66268774 Msa0465800:CDS
ATGATAATCCATCATTTACA+TGG 0.537258 3_3:-66262409 Msa0465800:three_prime_UTR
CATGGTCATGAAGATCATAT+CGG 0.538341 3_3:-66270269 Msa0465800:CDS
GGTGTATTGGAATCCAATGC+TGG 0.538955 3_3:+66269269 None:intergenic
ATAGGCAACATAAAAGGGAT+TGG 0.539493 3_3:-66262329 Msa0465800:three_prime_UTR
GCCGAATACCTCCATTGTAA+AGG 0.539763 3_3:+66269232 None:intergenic
TAAAGTTGTGAAAGGAAGGA+TGG 0.540086 3_3:-66263583 Msa0465800:CDS
ATCTGCCACAACAGATTCAC+TGG 0.540628 3_3:+66267951 None:intergenic
TTGTGGCAGATTCATTATTG+AGG 0.541904 3_3:-66267939 Msa0465800:CDS
AGATTCTGTTCAACGTAGGA+TGG 0.542555 3_3:-66270805 Msa0465800:CDS
ATTAAGAATGGAGAGATGCT+TGG 0.543149 3_3:-66265389 Msa0465800:CDS
ATACTTAGAAGCAGCTTGGA+AGG 0.544162 3_3:-66267681 Msa0465800:CDS
TTAGAGGAACTCTCTAAAGA+AGG 0.550937 3_3:-66268623 Msa0465800:CDS
CAAAGAACAAGTTTGTCGCT+GGG 0.552337 3_3:-66268880 Msa0465800:CDS
TAGCATAGCATAGCATAGGT+AGG 0.552392 3_3:-66271148 Msa0465800:five_prime_UTR
CATTTCAGCTTCAAAAGGAA+GGG 0.552543 3_3:-66267914 Msa0465800:CDS
TCTGGTTGGTTTAGAGCGGA+GGG 0.552825 3_3:+66271058 None:intergenic
GCCATTGCGATAGAAAATCC+TGG 0.555157 3_3:-66264786 Msa0465800:CDS
CTAATCAGGAGATCAAGAAT+GGG 0.558723 3_3:-66262614 Msa0465800:intron
CTGTCCCGTCAAAAGTCCAC+TGG 0.559295 3_3:-66264886 Msa0465800:CDS
CATTTATTACCAGAGTTGAT+GGG 0.561091 3_3:+66267639 None:intergenic
GTCGGAGATGTTGAGGAAGA+TGG 0.562067 3_3:-66264844 Msa0465800:CDS
TCACAACTTTAAATCTGTCA+CGG 0.562346 3_3:+66263595 None:intergenic
TATCAAGGGAAAGAGTATAT+GGG 0.563013 3_3:-66262282 Msa0465800:three_prime_UTR
AAATATACATAGAACACTAA+CGG 0.563379 3_3:-66262000 None:intergenic
AGATGTTGAGGAAGATGGTG+AGG 0.567241 3_3:-66264839 Msa0465800:CDS
TTGGCAATATCTTGAGGACA+TGG 0.567651 3_3:-66262574 Msa0465800:CDS
GAACTGTGTCGGAGATGTTG+AGG 0.569522 3_3:-66264851 Msa0465800:CDS
GCAAATCAAGCTATCATCAA+GGG 0.570671 3_3:+66262051 None:intergenic
ATGGAACTATTCTTCACACT+GGG 0.571280 3_3:-66268784 Msa0465800:CDS
GTCCAGCCATAGACATCTTG+TGG 0.573025 3_3:+66264962 None:intergenic
ACCACTACAACTGGAGCTGA+AGG 0.573383 3_3:-66263879 Msa0465800:CDS
CTCTAAAGAAGGAGTAACAT+TGG 0.574233 3_3:-66268612 Msa0465800:intron
TTCACACTTGAGAAATAGAA+GGG 0.575027 3_3:-66265363 Msa0465800:CDS
AATGACCACAAGTCTGAGCT+AGG 0.576602 3_3:-66262440 Msa0465800:three_prime_UTR
AGCATAGCATAGCATAGGTA+GGG 0.580330 3_3:-66271147 Msa0465800:five_prime_UTR
GCTGAAACGGAGAGTCTGGT+TGG 0.581128 3_3:+66271044 None:intergenic
GGTCACCTAGCTCAGACTTG+TGG 0.581524 3_3:+66262435 None:intergenic
AGATGTCTATGGCTGGACAA+AGG 0.582028 3_3:-66264957 Msa0465800:CDS
CAATGGTTATGTTTCACGAA+AGG 0.585188 3_3:-66263775 Msa0465800:CDS
AACCCAAGCTAAGCTATCAA+GGG 0.588882 3_3:-66262296 Msa0465800:three_prime_UTR
GCCTTCAGCTCCAGTTGTAG+TGG 0.589034 3_3:+66263878 None:intergenic
GTTCTTTCCATGTGAGCCAG+TGG 0.589970 3_3:+66264870 None:intergenic
AAGCTGCTGCCGATTTAACT+GGG 0.591068 3_3:-66267843 Msa0465800:CDS
TGGTAATGAGTCCCGTGTGA+TGG 0.593761 3_3:-66266340 Msa0465800:CDS
AGTGCATGTAGGCAAGTCAC+TGG 0.598619 3_3:-66267449 Msa0465800:CDS
GGAGATTCAAGGTAAATGAA+AGG 0.599263 3_3:+66268717 None:intergenic
CCAATAGGAAGAACACGTAA+TGG 0.600542 3_3:+66270753 None:intergenic
AGCAGCTTGGAAGGATGGAA+AGG 0.602363 3_3:-66267672 Msa0465800:CDS
TCACATGGAAAGAACTGTGT+CGG 0.607611 3_3:-66264862 Msa0465800:CDS
AGCAGAAATGCAGTGCATGT+AGG 0.607851 3_3:-66267460 Msa0465800:intron
CCATGCTTTCAAACTTACCA+AGG 0.609185 3_3:-66266597 Msa0465800:CDS
GACAACCAGTGAATCTGTTG+TGG 0.610763 3_3:-66267956 Msa0465800:CDS
TCCACCACACTGCAAACAAG+AGG 0.611195 3_3:-66264654 Msa0465800:intron
GTCTGAAGAAATGTCTGATG+CGG 0.611515 3_3:-66263700 Msa0465800:CDS
CAAATTGAATGGAAATGTGG+TGG 0.613223 3_3:-66262518 Msa0465800:exon
GATGATGGCATTGACACAGA+AGG 0.613399 3_3:-66263921 Msa0465800:CDS
CAAATGTGCTCTCACCTGGA+AGG 0.615112 3_3:-66267978 Msa0465800:CDS
GATGGAACTATTCTTCACAC+TGG 0.616053 3_3:-66268785 Msa0465800:CDS
AATATCTTGAGGACATGGAA+AGG 0.619122 3_3:-66262569 Msa0465800:CDS
TGGAGAATACTTGTTCCTGA+AGG 0.627983 3_3:-66265566 Msa0465800:CDS
AGAGTCTGGTTGGTTTAGAG+CGG 0.631106 3_3:+66271054 None:intergenic
TCCATAGCATAGCATAGCAT+AGG 0.633015 3_3:-66271152 Msa0465800:five_prime_UTR
GTTACCTCTTGTTTGCAGTG+TGG 0.633512 3_3:+66264650 None:intergenic
ATGTAGATTTGATGCAAACT+GGG 0.634137 3_3:+66267882 None:intergenic
TGTAAATGTCTTCTGCGTTG+TGG 0.634999 3_3:-66262119 Msa0465800:three_prime_UTR
GATTCATCATTTCCATCACA+CGG 0.639799 3_3:+66266328 None:intergenic
AAATGTCTTCTGCGTTGTGG+TGG 0.643205 3_3:-66262116 Msa0465800:three_prime_UTR
ATTTGAGATAGAACCAATCA+GGG 0.643383 3_3:-66268855 Msa0465800:CDS
ATTCATCATTTCCATCACAC+GGG 0.645095 3_3:+66266329 None:intergenic
CAACAAATTGAATGGAAATG+TGG 0.646093 3_3:-66262521 Msa0465800:exon
AAATTGAATGGAAATGTGGT+GGG 0.649266 3_3:-66262517 Msa0465800:exon
AGGCGATTTATCTGATTCAG+GGG 0.651319 3_3:-66263859 Msa0465800:CDS
ATTGTCTAGTGATGAAACAC+CGG 0.652259 3_3:-66262544 Msa0465800:CDS
GTGTATTGGAATCCAATGCT+GGG 0.657667 3_3:+66269270 None:intergenic
AAATCAATCAAAGCAAACAA+TGG 0.658404 3_3:-66263792 Msa0465800:CDS
TTGGATCAACAATAGTTATG+GGG 0.659409 3_3:-66266293 Msa0465800:CDS
ACATCTGGACATGCATATCG+TGG 0.659861 3_3:-66266252 Msa0465800:CDS
AGTTTGCATCAAATCTACAT+CGG 0.660918 3_3:-66267879 Msa0465800:CDS
TGGAAGATTCTGTTCAACGT+AGG 0.664297 3_3:-66270809 Msa0465800:CDS
TTGATATTCCAGGACCAACG+TGG 0.664721 3_3:+66264718 None:intergenic
AAGATGGTGAGGAAGTACAG+TGG 0.672062 3_3:-66264828 Msa0465800:CDS
GAAGCACTTGTTATAACACA+TGG 0.674931 3_3:-66270287 Msa0465800:CDS
ATGCAGTTGAAATATAGTGA+TGG 0.680617 3_3:-66265214 Msa0465800:intron
GCAAGATTTAAGGCAGCACG+TGG 0.681321 3_3:+66266635 None:intergenic
TGTACAGGAAGAAAATGTTG+CGG 0.705564 3_3:+66265589 None:intergenic
TGATATTCCAGGACCAACGT+GGG 0.714591 3_3:+66264719 None:intergenic
TTGTCTGGCAAATCCCACGT+TGG 0.720381 3_3:-66264732 Msa0465800:CDS
CAACTTTAAATCTGTCACGG+AGG 0.723247 3_3:+66263598 None:intergenic
ATAGGAAGAACACGTAATGG+CGG 0.726743 3_3:+66270756 None:intergenic
TCACACGGGACTCATTACCA+GGG 0.727328 3_3:+66266343 None:intergenic
TGGAACTATTCTTCACACTG+GGG 0.745314 3_3:-66268783 Msa0465800:CDS
ATATACATAGAACACTAACG+GGG 0.789943 3_3:-66261998 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTCTTACAAAAA+TGG - chr3_3:66262121-66262140 Msa0465800:three_prime_UTR 10.0%
!!! ATATTAAATATTTTCAATTG+TGG - chr3_3:66264803-66264822 Msa0465800:CDS 10.0%
!! ATTTGTATAATTATTATATC+AGG - chr3_3:66265515-66265534 Msa0465800:intron 10.0%
!! ATTATAAATAGTATTATTCT+TGG - chr3_3:66266128-66266147 Msa0465800:intron 10.0%
!! TTATAAATATAAATCACAAA+TGG + chr3_3:66266325-66266344 None:intergenic 10.0%
!!! AAATAAAAATTAGTTTGAAA+AGG + chr3_3:66267348-66267367 None:intergenic 10.0%
!!! AATTTTATTAATTTTGTTAG+TGG - chr3_3:66271080-66271099 Msa0465800:CDS 10.0%
!! TAACTTATAGAAAACTATTA+AGG + chr3_3:66262613-66262632 None:intergenic 15.0%
!! ACTTAAACAAATAAAAGTAA+AGG + chr3_3:66262831-66262850 None:intergenic 15.0%
!! ATACAACATTTATAAGAAAA+TGG - chr3_3:66262922-66262941 Msa0465800:intron 15.0%
!! ACAATTGTTTCATATATAAT+TGG + chr3_3:66263613-66263632 None:intergenic 15.0%
!! AATTATATATGAAACAATTG+TGG - chr3_3:66263612-66263631 Msa0465800:CDS 15.0%
!! ATTATATATGAAACAATTGT+GGG - chr3_3:66263613-66263632 Msa0465800:CDS 15.0%
!! TCTATTATAGTAAAATTGTA+AGG + chr3_3:66263878-66263897 None:intergenic 15.0%
!!! TTTTTTTTCTAACAATACAA+GGG + chr3_3:66265025-66265044 None:intergenic 15.0%
!!! ATTTTTTTTCTAACAATACA+AGG + chr3_3:66265026-66265045 None:intergenic 15.0%
!!! TTGATTTATTAATTTGTTGT+TGG - chr3_3:66265858-66265877 Msa0465800:intron 15.0%
!! TACTATTTATAATCAAAACA+TGG + chr3_3:66266121-66266140 None:intergenic 15.0%
!! TAAATATAATAAAGCTGAAT+AGG + chr3_3:66266356-66266375 None:intergenic 15.0%
!! TTTGTGGATAAAAAAATATA+AGG + chr3_3:66266828-66266847 None:intergenic 15.0%
!! TAAAAAAAATTGAATAGACA+AGG + chr3_3:66267102-66267121 None:intergenic 15.0%
!!! TTATTAGATACTTTCTAAAA+GGG + chr3_3:66267979-66267998 None:intergenic 15.0%
!!! AAAAATATTTGGTGTAAATA+AGG + chr3_3:66269238-66269257 None:intergenic 15.0%
!!! TTATTTACACCAAATATTTT+TGG - chr3_3:66269237-66269256 Msa0465800:intron 15.0%
!! AAAATTACACCAAAAATATT+TGG + chr3_3:66269249-66269268 None:intergenic 15.0%
!!! TTATTTTTCTTTACTGATTT+TGG + chr3_3:66269581-66269600 None:intergenic 15.0%
!! AATCAGTAAAGAAAAATAAA+TGG - chr3_3:66269582-66269601 Msa0465800:intron 15.0%
!!! AAATACTTTCTTTTTTTAAG+AGG - chr3_3:66270149-66270168 Msa0465800:intron 15.0%
!!! TTAATATCCATAATTCTTTT+AGG - chr3_3:66270883-66270902 Msa0465800:intron 15.0%
!!! TAATATCCATAATTCTTTTA+GGG - chr3_3:66270884-66270903 Msa0465800:intron 15.0%
!! ACAAAAGAAACAAAAATATT+GGG + chr3_3:66271033-66271052 None:intergenic 15.0%
!!! ATGTAATGGAAATATCTAAT+TGG - chr3_3:66262318-66262337 Msa0465800:three_prime_UTR 20.0%
!!! AATTTTTGTATGTATGCATT+TGG - chr3_3:66262851-66262870 Msa0465800:intron 20.0%
!! TTTCTTATAAATGTTGTATC+AGG + chr3_3:66262921-66262940 None:intergenic 20.0%
!!! TTACTGTTTTCATAATGAAA+AGG - chr3_3:66263207-66263226 Msa0465800:intron 20.0%
!! TGTAGAATTAAGTTATTTGA+TGG + chr3_3:66263273-66263292 None:intergenic 20.0%
!! AAATAACTTAATTCTACAGT+TGG - chr3_3:66263275-66263294 Msa0465800:intron 20.0%
!! AAATATAAACATACAGCAAA+AGG + chr3_3:66263397-66263416 None:intergenic 20.0%
!! ATCTAAATCTAGAAAGATAT+AGG + chr3_3:66263713-66263732 None:intergenic 20.0%
!! TAAAGTTACATAAGACATTA+AGG + chr3_3:66263772-66263791 None:intergenic 20.0%
!!! TTTGTCCTTTATTTATATGT+TGG - chr3_3:66263916-66263935 Msa0465800:CDS 20.0%
!! AAGAACCAACATATAAATAA+AGG + chr3_3:66263924-66263943 None:intergenic 20.0%
!!! ATAAATGCTAGTTTTTGAAT+CGG - chr3_3:66264051-66264070 Msa0465800:intron 20.0%
!! TAAATATGTAATCTCTACTT+TGG - chr3_3:66264975-66264994 Msa0465800:CDS 20.0%
!!! TTTTTTTCTAACAATACAAG+GGG + chr3_3:66265024-66265043 None:intergenic 20.0%
!!! TTAGCATTTAAGATAAACAA+GGG + chr3_3:66265194-66265213 None:intergenic 20.0%
!!! ATTAGCATTTAAGATAAACA+AGG + chr3_3:66265195-66265214 None:intergenic 20.0%
!! TTATTATATCAGGTATTTGT+TGG - chr3_3:66265525-66265544 Msa0465800:CDS 20.0%
!!! ATTTATTAATTTGTTGTTGG+AGG - chr3_3:66265861-66265880 Msa0465800:intron 20.0%
!! TTGAATGAAATAATAAAGAG+AGG + chr3_3:66266055-66266074 None:intergenic 20.0%
!! TGTTCATATTTCATGAAATT+AGG + chr3_3:66266538-66266557 None:intergenic 20.0%
!! ATTTCATGAAATATGAACAT+TGG - chr3_3:66266539-66266558 Msa0465800:intron 20.0%
!! TTTATCTTGAAGCTTAATAT+GGG - chr3_3:66266733-66266752 Msa0465800:intron 20.0%
!!! AAAAAATACAAACTAGTTTG+TGG + chr3_3:66266844-66266863 None:intergenic 20.0%
!!! TGATTTAAAATCAATTTGTC+AGG - chr3_3:66266874-66266893 Msa0465800:intron 20.0%
!!! AATTGTTTTTAAACTATCCT+TGG + chr3_3:66267167-66267186 None:intergenic 20.0%
!!! AAAACAATTTTGAAAGAAAC+TGG - chr3_3:66267178-66267197 Msa0465800:intron 20.0%
!!! AATAACATCTATATTTTTGC+AGG - chr3_3:66267609-66267628 Msa0465800:intron 20.0%
!!! TATTAGATACTTTCTAAAAG+GGG + chr3_3:66267978-66267997 None:intergenic 20.0%
!! CTTATTAGATACTTTCTAAA+AGG + chr3_3:66267980-66267999 None:intergenic 20.0%
!!! AATAAGCTATGTGATTTTTT+TGG - chr3_3:66267994-66268013 Msa0465800:CDS 20.0%
!!! ATAAGCTATGTGATTTTTTT+GGG - chr3_3:66267995-66268014 Msa0465800:CDS 20.0%
!! TGCTGTAAAAGATAAATATT+AGG + chr3_3:66268193-66268212 None:intergenic 20.0%
!!! AATATTTATCTTTTACAGCA+TGG - chr3_3:66268193-66268212 Msa0465800:intron 20.0%
!!! CCAAACTTTCTAAATTTTTA+GGG + chr3_3:66268229-66268248 None:intergenic 20.0%
!! TATTTATACAGGTAAGAAAA+TGG + chr3_3:66268746-66268765 None:intergenic 20.0%
!! TACTATGATTATGATAAGAT+AGG + chr3_3:66268838-66268857 None:intergenic 20.0%
!! CATAGTAATCAAAACTTATT+TGG + chr3_3:66269089-66269108 None:intergenic 20.0%
!! TTATTATTTAAGTGATAGCA+TGG + chr3_3:66269832-66269851 None:intergenic 20.0%
!! AATAATAATTCTAAGCATAC+TGG - chr3_3:66269844-66269863 Msa0465800:intron 20.0%
!!! ATTTTAATGTAGAGAAAGTT+AGG - chr3_3:66270448-66270467 Msa0465800:intron 20.0%
!! ATAAGTTATTGTTGAAATAG+TGG + chr3_3:66270602-66270621 None:intergenic 20.0%
!!! ACTTATTTTGTATTCTAATC+AGG - chr3_3:66270616-66270635 Msa0465800:intron 20.0%
!! CAAAAGAAACAAAAATATTG+GGG + chr3_3:66271032-66271051 None:intergenic 20.0%
!! GACAAAAGAAACAAAAATAT+TGG + chr3_3:66271034-66271053 None:intergenic 20.0%
!!! TAGTGTTCTATGTATATTTT+TGG + chr3_3:66271243-66271262 None:intergenic 20.0%
! TATGTTTATATTTCCTTGGT+TGG - chr3_3:66263404-66263423 Msa0465800:intron 25.0%
! ATGTTTATATTTCCTTGGTT+GGG - chr3_3:66263405-66263424 Msa0465800:intron 25.0%
! ATTTCAAATCAGAAAGAGAA+AGG + chr3_3:66263487-66263506 None:intergenic 25.0%
!! CTTTCTGATTTGAAATTTAG+AGG - chr3_3:66263491-66263510 Msa0465800:CDS 25.0%
! AATTTAGAGGTTTCAAAGTT+TGG - chr3_3:66263504-66263523 Msa0465800:CDS 25.0%
!!! TTTCAAAGTTTGGTGTTTTA+TGG - chr3_3:66263514-66263533 Msa0465800:CDS 25.0%
!!! TTCAAAGTTTGGTGTTTTAT+GGG - chr3_3:66263515-66263534 Msa0465800:CDS 25.0%
! TTAGATGAAATCTTAACCTT+TGG + chr3_3:66263547-66263566 None:intergenic 25.0%
!!! TGAAGTTTGTGTTGTTATTT+TGG - chr3_3:66263663-66263682 Msa0465800:CDS 25.0%
!!! GAAGTTTGTGTTGTTATTTT+GGG - chr3_3:66263664-66263683 Msa0465800:CDS 25.0%
!!! AAGTTTGTGTTGTTATTTTG+GGG - chr3_3:66263665-66263684 Msa0465800:CDS 25.0%
! TAAATCTAGAAAGATATAGG+AGG + chr3_3:66263710-66263729 None:intergenic 25.0%
! TCTAGATTTAGATTTCAAAG+AGG - chr3_3:66263720-66263739 Msa0465800:CDS 25.0%
! GCTTATAAAAAAACGTTTGA+AGG - chr3_3:66264299-66264318 Msa0465800:intron 25.0%
!!! ATATTTTGAGTCTAGATGTA+AGG + chr3_3:66264338-66264357 None:intergenic 25.0%
!! ATATATCTTTAGCTTATCGT+TGG - chr3_3:66264696-66264715 Msa0465800:CDS 25.0%
!! TATATCTTTAGCTTATCGTT+GGG - chr3_3:66264697-66264716 Msa0465800:CDS 25.0%
!!! CAATGAAATTTTGAAGTAGT+GGG + chr3_3:66264926-66264945 None:intergenic 25.0%
!!! TTTTTTCTAACAATACAAGG+GGG + chr3_3:66265023-66265042 None:intergenic 25.0%
!! ATTTAAGATAAACAAGGGAA+AGG + chr3_3:66265189-66265208 None:intergenic 25.0%
!! TTCTTTTCTGCAATTGATAA+TGG - chr3_3:66265455-66265474 Msa0465800:intron 25.0%
! GGGGTAGAAATTTAAAAATT+AGG + chr3_3:66265684-66265703 None:intergenic 25.0%
!!! TTTCCGATGTATTTTAACTT+CGG - chr3_3:66265919-66265938 Msa0465800:intron 25.0%
! CTGAAGTAATATGTCAAAAA+GGG + chr3_3:66265948-66265967 None:intergenic 25.0%
! ACTGAAGTAATATGTCAAAA+AGG + chr3_3:66265949-66265968 None:intergenic 25.0%
! AAGATGTAAAGACTGAAATA+TGG + chr3_3:66266179-66266198 None:intergenic 25.0%
! TATTTCAGTCTTTACATCTT+TGG - chr3_3:66266179-66266198 Msa0465800:intron 25.0%
!! CATTGTCTCTAATTTTACAT+AGG - chr3_3:66266416-66266435 Msa0465800:intron 25.0%
!! TGAAATTAGGCAGTATTTTA+AGG + chr3_3:66266525-66266544 None:intergenic 25.0%
! AATATGAACATTGGAATACA+AGG - chr3_3:66266548-66266567 Msa0465800:intron 25.0%
! ATACAAAACAATATCTTCCT+TGG + chr3_3:66266667-66266686 None:intergenic 25.0%
!!! TATTGTTTTGTATTCAGCTA+AGG - chr3_3:66266674-66266693 Msa0465800:intron 25.0%
! AAAATACTGCATTATCTGTT+TGG - chr3_3:66266703-66266722 Msa0465800:intron 25.0%
! CTTTATCTTGAAGCTTAATA+TGG - chr3_3:66266732-66266751 Msa0465800:intron 25.0%
! ATTGGATCAACAATAGTTAT+GGG - chr3_3:66266950-66266969 Msa0465800:intron 25.0%
! ATATCGATACGTAAACTAAA+AGG + chr3_3:66267064-66267083 None:intergenic 25.0%
! GCAGAGTTGTAATAATAATT+TGG + chr3_3:66267141-66267160 None:intergenic 25.0%
!! TTTTTCTTACCCAAATACTA+AGG + chr3_3:66267249-66267268 None:intergenic 25.0%
!!! TTTTCTAATGCATGTTGATT+AGG - chr3_3:66267524-66267543 Msa0465800:intron 25.0%
!! CTGTAAATTTTCTTTTCCAA+GGG + chr3_3:66267928-66267947 None:intergenic 25.0%
! AAAGAAAATTTACAGGTTAG+TGG - chr3_3:66267933-66267952 Msa0465800:CDS 25.0%
! CCCTAAAAATTTAGAAAGTT+TGG - chr3_3:66268226-66268245 Msa0465800:intron 25.0%
!! GCCAAACTTTCTAAATTTTT+AGG + chr3_3:66268230-66268249 None:intergenic 25.0%
! AAAAATTTAGAAAGTTTGGC+TGG - chr3_3:66268230-66268249 Msa0465800:intron 25.0%
!! AATTCTTATCTTCCCTTTTA+AGG + chr3_3:66268261-66268280 None:intergenic 25.0%
!!! CTATTTTTTGTGAAACTCAA+AGG - chr3_3:66268973-66268992 Msa0465800:intron 25.0%
! TGCACTAATTAATAGAACAT+GGG + chr3_3:66269303-66269322 None:intergenic 25.0%
! AAATCAATCAAAGCAAACAA+TGG - chr3_3:66269452-66269471 Msa0465800:intron 25.0%
! GGTAAAACCATAAAAAATGA+TGG - chr3_3:66269902-66269921 Msa0465800:intron 25.0%
!! AAACCATAAAAAATGATGGA+TGG - chr3_3:66269906-66269925 Msa0465800:intron 25.0%
!!! AACCATAAAAAATGATGGAT+GGG - chr3_3:66269907-66269926 Msa0465800:intron 25.0%
! TCTTTGTAGTAAAACAAAGT+GGG + chr3_3:66270377-66270396 None:intergenic 25.0%
! TTCTTTGTAGTAAAACAAAG+TGG + chr3_3:66270378-66270397 None:intergenic 25.0%
!! ATTTTAGACCATGTATATCT+CGG - chr3_3:66270496-66270515 Msa0465800:intron 25.0%
! ATCTCGGTATTATCTATAAT+AGG - chr3_3:66270512-66270531 Msa0465800:intron 25.0%
! AAAAAATTGGCAATATCTTG+AGG - chr3_3:66270664-66270683 Msa0465800:intron 25.0%
!!! TATTTTGGTGAGCTATATTT+TGG - chr3_3:66270762-66270781 Msa0465800:CDS 25.0%
! ATGATAATCCATCATTTACA+TGG - chr3_3:66270835-66270854 Msa0465800:CDS 25.0%
! AGAAGACATTTACACATTTA+TGG + chr3_3:66271119-66271138 None:intergenic 25.0%
! ATTTTGTTCATTCAGTGGAT+TGG + chr3_3:66262035-66262054 None:intergenic 30.0%
ACTATGCTGTTATCATGTAA+TGG - chr3_3:66262304-66262323 Msa0465800:three_prime_UTR 30.0%
!!! TTATTTTTGAATGCACGAGT+AGG - chr3_3:66262344-66262363 Msa0465800:three_prime_UTR 30.0%
AAAAGAAGGAGAAGAATTGA+AGG - chr3_3:66262398-66262417 Msa0465800:three_prime_UTR 30.0%
!!! GAATCTTCCATACTTTTTCT+TGG + chr3_3:66262425-66262444 None:intergenic 30.0%
! CAATTTTATGAAGGAAACGA+CGG - chr3_3:66262464-66262483 Msa0465800:three_prime_UTR 30.0%
GAATGAATTGTATGCTTGTT+GGG - chr3_3:66262531-66262550 Msa0465800:exon 30.0%
AAAAGCTGAAAACAACTTAC+TGG - chr3_3:66262675-66262694 Msa0465800:intron 30.0%
ACAATTTGACAATGACTTTG+AGG + chr3_3:66262791-66262810 None:intergenic 30.0%
! GTATAATCTTTTGTACTCCA+AGG + chr3_3:66262899-66262918 None:intergenic 30.0%
! TAACAAGTGCTTCAATTTTG+TGG + chr3_3:66262950-66262969 None:intergenic 30.0%
!!! AAAAAGCACTCTTTTGTTCA+TGG - chr3_3:66263161-66263180 Msa0465800:intron 30.0%
TAACTTAATTCTACAGTTGG+TGG - chr3_3:66263278-66263297 Msa0465800:intron 30.0%
GCTGTATGTTTATATTTCCT+TGG - chr3_3:66263400-66263419 Msa0465800:intron 30.0%
!! AGAGACTTTTGTTTGAAATG+TGG - chr3_3:66263570-66263589 Msa0465800:CDS 30.0%
! AAGGAAAATGAAGTGTTAGA+AGG + chr3_3:66263859-66263878 None:intergenic 30.0%
GTTCTTAACATTACTTATCC+TGG - chr3_3:66263938-66263957 Msa0465800:intron 30.0%
AGATGCAAAAATTGGTGTAT+TGG + chr3_3:66263991-66264010 None:intergenic 30.0%
GTAAAGGAAGATGCAAAAAT+TGG + chr3_3:66263999-66264018 None:intergenic 30.0%
! TTTTGCATCTTCCTTTACAA+TGG - chr3_3:66264001-66264020 Msa0465800:intron 30.0%
AGAATAGATGTCTATTACAG+TGG + chr3_3:66264179-66264198 None:intergenic 30.0%
! ATTTGAGATAGAACCAATCA+GGG - chr3_3:66264389-66264408 Msa0465800:intron 30.0%
! TTGATGGGAAAGTTTTTGAT+CGG - chr3_3:66264592-66264611 Msa0465800:intron 30.0%
!!! GCAATGAAATTTTGAAGTAG+TGG + chr3_3:66264927-66264946 None:intergenic 30.0%
! TTTTTCTAACAATACAAGGG+GGG + chr3_3:66265022-66265041 None:intergenic 30.0%
ATTATAAACAAGTGAGCATC+TGG + chr3_3:66265112-66265131 None:intergenic 30.0%
ATGTAGATTTGATGCAAACT+GGG + chr3_3:66265365-66265384 None:intergenic 30.0%
AGTTTGCATCAAATCTACAT+CGG - chr3_3:66265365-66265384 Msa0465800:CDS 30.0%
AGAAAAGAATACTAGCTAGT+GGG + chr3_3:66265444-66265463 None:intergenic 30.0%
! TATTTGTTGGCATGTCTTTA+AGG - chr3_3:66265538-66265557 Msa0465800:CDS 30.0%
! CATTTATTACCAGAGTTGAT+GGG + chr3_3:66265608-66265627 None:intergenic 30.0%
!!! GATCTGCTTTTTCATTTACT+AGG - chr3_3:66265756-66265775 Msa0465800:intron 30.0%
AATACATCGGAAAATTCATG+TGG + chr3_3:66265912-66265931 None:intergenic 30.0%
!!! TTCCGATGTATTTTAACTTC+GGG - chr3_3:66265920-66265939 Msa0465800:intron 30.0%
TGATTTCAAGAGGTTCATTA+TGG - chr3_3:66265983-66266002 Msa0465800:intron 30.0%
TGACAGCATACTGTATTTAA+AGG + chr3_3:66266010-66266029 None:intergenic 30.0%
TGTCATTATCTGTGACTAAT+TGG - chr3_3:66266025-66266044 Msa0465800:intron 30.0%
ATGAAATAATAAAGAGAGGC+AGG + chr3_3:66266051-66266070 None:intergenic 30.0%
! GACACAAAAGCACATATATT+TGG + chr3_3:66266581-66266600 None:intergenic 30.0%
! AATATATGTGCTTTTGTGTC+AGG - chr3_3:66266581-66266600 Msa0465800:CDS 30.0%
TCCAAAAGATGCAAGATTTA+AGG + chr3_3:66266622-66266641 None:intergenic 30.0%
GCAGGTTGTAATTTCATAAT+AGG + chr3_3:66266775-66266794 None:intergenic 30.0%
!! AATATAAGGTGTTGCTAGAA+AGG + chr3_3:66266814-66266833 None:intergenic 30.0%
GATTGGATCAACAATAGTTA+TGG - chr3_3:66266949-66266968 Msa0465800:intron 30.0%
TTGGATCAACAATAGTTATG+GGG - chr3_3:66266951-66266970 Msa0465800:intron 30.0%
AATGAAAACTTACACACATC+TGG - chr3_3:66266977-66266996 Msa0465800:intron 30.0%
GTATTTGGGTAAGAAAAATG+AGG - chr3_3:66267251-66267270 Msa0465800:intron 30.0%
CATGAATGATTGTACTGAAA+AGG + chr3_3:66267382-66267401 None:intergenic 30.0%
! TGCATGTTGATTAGGATATT+TGG - chr3_3:66267532-66267551 Msa0465800:intron 30.0%
!! AACATCTATATTTTTGCAGG+AGG - chr3_3:66267612-66267631 Msa0465800:intron 30.0%
TTTCACACTTGAGAAATAGA+AGG - chr3_3:66267880-66267899 Msa0465800:CDS 30.0%
TTCACACTTGAGAAATAGAA+GGG - chr3_3:66267881-66267900 Msa0465800:CDS 30.0%
AATAGAAGGGTTCTTTCTAA+TGG - chr3_3:66267894-66267913 Msa0465800:CDS 30.0%
! CCTGTAAATTTTCTTTTCCA+AGG + chr3_3:66267929-66267948 None:intergenic 30.0%
CCTTGGAAAAGAAAATTTAC+AGG - chr3_3:66267926-66267945 Msa0465800:CDS 30.0%
TATTTCAACTGCATGAGAAA+AGG + chr3_3:66268024-66268043 None:intergenic 30.0%
ATGCAGTTGAAATATAGTGA+TGG - chr3_3:66268030-66268049 Msa0465800:intron 30.0%
CAATTCTCATTCTTTCATCA+AGG + chr3_3:66268089-66268108 None:intergenic 30.0%
AGAATGAGAATTGCATTAGA+TGG - chr3_3:66268096-66268115 Msa0465800:intron 30.0%
GAGATAAACACAAAATTGTC+TGG - chr3_3:66268497-66268516 Msa0465800:intron 30.0%
CTTCTAAATGTTGATATTCC+AGG + chr3_3:66268539-66268558 None:intergenic 30.0%
ATCAACATTTAGAAGATCCA+TGG - chr3_3:66268544-66268563 Msa0465800:intron 30.0%
ATCCATGGATGAACATAAAA+AGG - chr3_3:66268559-66268578 Msa0465800:intron 30.0%
! TTCCTTTTTATGTTCATCCA+TGG + chr3_3:66268564-66268583 None:intergenic 30.0%
!!! GTCAGTTTTGCTATTTATAC+AGG + chr3_3:66268757-66268776 None:intergenic 30.0%
! TGCTTTTACCATGGATATAT+GGG + chr3_3:66268787-66268806 None:intergenic 30.0%
TAGTAGAATGCTACTGTTAT+TGG - chr3_3:66268917-66268936 Msa0465800:CDS 30.0%
AGTGAAAACCATAGTTAGAT+CGG + chr3_3:66269017-66269036 None:intergenic 30.0%
TTATCTTCACAAAACAATGC+TGG - chr3_3:66269044-66269063 Msa0465800:intron 30.0%
TTACTAAATAGACTGTAGTC+AGG + chr3_3:66269188-66269207 None:intergenic 30.0%
!! TGGTGTAAATAAGGTATTGA+AGG + chr3_3:66269229-66269248 None:intergenic 30.0%
CTGCACTAATTAATAGAACA+TGG + chr3_3:66269304-66269323 None:intergenic 30.0%
CTATTAATTAGTGCAGATGA+TGG - chr3_3:66269308-66269327 Msa0465800:intron 30.0%
GAAAAATAAATGGAAAACCG+AGG - chr3_3:66269592-66269611 Msa0465800:intron 30.0%
TCACAACTTTAAATCTGTCA+CGG + chr3_3:66269652-66269671 None:intergenic 30.0%
! GACAGATTTAAAGTTGTGAA+AGG - chr3_3:66269653-66269672 Msa0465800:intron 30.0%
! GATTTAAAGTTGTGAAAGGA+AGG - chr3_3:66269657-66269676 Msa0465800:intron 30.0%
ATCTTTGGCACTTAAATATG+AGG - chr3_3:66269763-66269782 Msa0465800:intron 30.0%
TGTTTAATGATCAGTTTGTG+AGG - chr3_3:66269873-66269892 Msa0465800:intron 30.0%
!!! AACCCATCCATCATTTTTTA+TGG + chr3_3:66269912-66269931 None:intergenic 30.0%
AAATCGGTGTACATTGTTAT+GGG + chr3_3:66270103-66270122 None:intergenic 30.0%
TAAATCGGTGTACATTGTTA+TGG + chr3_3:66270104-66270123 None:intergenic 30.0%
ACAAGAAAAGCAACGTAAAT+CGG + chr3_3:66270119-66270138 None:intergenic 30.0%
!! TTGCTTTTCTTGTGTAAGAT+AGG - chr3_3:66270126-66270145 Msa0465800:intron 30.0%
! AGGTTTTCTTGCATCTTTTT+CGG - chr3_3:66270169-66270188 Msa0465800:intron 30.0%
AAATATCAATTGCATGCCAT+AGG - chr3_3:66270303-66270322 Msa0465800:CDS 30.0%
CTTTGTAGTAAAACAAAGTG+GGG + chr3_3:66270376-66270395 None:intergenic 30.0%
AGATAATACCGAGATATACA+TGG + chr3_3:66270507-66270526 None:intergenic 30.0%
TCGGTATTATCTATAATAGG+AGG - chr3_3:66270515-66270534 Msa0465800:intron 30.0%
CGGTATTATCTATAATAGGA+GGG - chr3_3:66270516-66270535 Msa0465800:intron 30.0%
GGAAAGATAGCAGAAAAAAT+TGG - chr3_3:66270651-66270670 Msa0465800:intron 30.0%
!! ATTTCCATTCAATTTGTTGC+CGG + chr3_3:66270722-66270741 None:intergenic 30.0%
CAACAAATTGAATGGAAATG+TGG - chr3_3:66270723-66270742 Msa0465800:intron 30.0%
AAATTGAATGGAAATGTGGT+GGG - chr3_3:66270727-66270746 Msa0465800:CDS 30.0%
! GGGCAGAATAAGAAATATTT+TGG - chr3_3:66270747-66270766 Msa0465800:CDS 30.0%
!! TGAGCTATATTTTGGAAATG+TGG - chr3_3:66270770-66270789 Msa0465800:CDS 30.0%
!! TAAATGATGGATTATCATCC+TGG + chr3_3:66270833-66270852 None:intergenic 30.0%
AAGGTAATAGGCAACATAAA+AGG - chr3_3:66270909-66270928 Msa0465800:intron 30.0%
AGGTAATAGGCAACATAAAA+GGG - chr3_3:66270910-66270929 Msa0465800:intron 30.0%
! TATCAAGGGAAAGAGTATAT+GGG - chr3_3:66270962-66270981 Msa0465800:intron 30.0%
!! GAAAGAGTATATGGGTTTTA+GGG - chr3_3:66270970-66270989 Msa0465800:intron 30.0%
!! AAAGAGTATATGGGTTTTAG+GGG - chr3_3:66270971-66270990 Msa0465800:intron 30.0%
! CATACAACATTGATAGTCAT+AGG - chr3_3:66271151-66271170 Msa0465800:five_prime_UTR 30.0%
!!! TTCATTCAGTGGATTGGTTT+TGG + chr3_3:66262029-66262048 None:intergenic 35.0%
! GGAAGATTTTGTTCATTCAG+TGG + chr3_3:66262040-66262059 None:intergenic 35.0%
!! TGAAAGAGTGTTGTTGATAG+CGG + chr3_3:66262068-66262087 None:intergenic 35.0%
! ATTCTTCTCCTTCTTTTGTG+TGG + chr3_3:66262395-66262414 None:intergenic 35.0%
TGAAGGTCCAAGAAAAAGTA+TGG - chr3_3:66262415-66262434 Msa0465800:three_prime_UTR 35.0%
! AGGATGGAGCAATTTTATGA+AGG - chr3_3:66262455-66262474 Msa0465800:three_prime_UTR 35.0%
GGAATGAATTGTATGCTTGT+TGG - chr3_3:66262530-66262549 Msa0465800:exon 35.0%
CAGCATCAATGAGGATATAA+CGG + chr3_3:66262565-66262584 None:intergenic 35.0%
ACTATTAAGGACCACTTACT+CGG + chr3_3:66262600-66262619 None:intergenic 35.0%
!! GAAGCACTTGTTATAACACA+TGG - chr3_3:66262957-66262976 Msa0465800:intron 35.0%
CATGGTCATGAAGATCATAT+CGG - chr3_3:66262975-66262994 Msa0465800:intron 35.0%
! AGTCCTATGTCTAAAACATG+AGG + chr3_3:66263315-66263334 None:intergenic 35.0%
TAGACATAGGACTCTTTGAT+AGG - chr3_3:66263322-66263341 Msa0465800:intron 35.0%
TCAGAAAGAGAAAGGAAGAT+AGG + chr3_3:66263479-66263498 None:intergenic 35.0%
! GTTTTATGGGTCTTTTCCAA+AGG - chr3_3:66263528-66263547 Msa0465800:CDS 35.0%
! ATGAAGTGTTAGAAGGAAGA+AGG + chr3_3:66263852-66263871 None:intergenic 35.0%
ATTACTTATCCTGGTTCATC+AGG - chr3_3:66263947-66263966 Msa0465800:intron 35.0%
!! TCCTTTACAATGGAGGTATT+CGG - chr3_3:66264011-66264030 Msa0465800:intron 35.0%
GTGTGTATCAACTAAACTGT+TGG - chr3_3:66264084-66264103 Msa0465800:intron 35.0%
GTATCAACTAAACTGTTGGT+AGG - chr3_3:66264088-66264107 Msa0465800:intron 35.0%
AGAAAAAATATCACCTTCCC+TGG + chr3_3:66264271-66264290 None:intergenic 35.0%
AAAAAACGTTTGAAGGAGCA+TGG - chr3_3:66264306-66264325 Msa0465800:intron 35.0%
!! CTGATTGGTTCTATCTCAAA+TGG + chr3_3:66264390-66264409 None:intergenic 35.0%
! CATTTGAGATAGAACCAATC+AGG - chr3_3:66264388-66264407 Msa0465800:intron 35.0%
ATGGAACTATTCTTCACACT+GGG - chr3_3:66264460-66264479 Msa0465800:intron 35.0%
GGAGATTCAAGGTAAATGAA+AGG + chr3_3:66264530-66264549 None:intergenic 35.0%
TCAAAAACTTTCCCATCAAG+TGG + chr3_3:66264591-66264610 None:intergenic 35.0%
! TGATGGGAAAGTTTTTGATC+GGG - chr3_3:66264593-66264612 Msa0465800:intron 35.0%
! TTAGAGGAACTCTCTAAAGA+AGG - chr3_3:66264621-66264640 Msa0465800:intron 35.0%
! CTCTAAAGAAGGAGTAACAT+TGG - chr3_3:66264632-66264651 Msa0465800:intron 35.0%
AAGCCATATTCAGCTTAACA+GGG + chr3_3:66264858-66264877 None:intergenic 35.0%
AAAGCCATATTCAGCTTAAC+AGG + chr3_3:66264859-66264878 None:intergenic 35.0%
TAAGCTGAATATGGCTTTCA+TGG - chr3_3:66264861-66264880 Msa0465800:CDS 35.0%
ATGCTAATCACAAGCAAACA+TGG - chr3_3:66265207-66265226 Msa0465800:CDS 35.0%
TTGTGGCAGATTCATTATTG+AGG - chr3_3:66265305-66265324 Msa0465800:intron 35.0%
ACATTTCAGCTTCAAAAGGA+AGG - chr3_3:66265329-66265348 Msa0465800:CDS 35.0%
CATTTCAGCTTCAAAAGGAA+GGG - chr3_3:66265330-66265349 Msa0465800:CDS 35.0%
GATGTAGATTTGATGCAAAC+TGG + chr3_3:66265366-66265385 None:intergenic 35.0%
CAACTTTCTCCCAGTTAAAT+CGG + chr3_3:66265413-66265432 None:intergenic 35.0%
CAGAAAAGAATACTAGCTAG+TGG + chr3_3:66265445-66265464 None:intergenic 35.0%
GCATTTATTACCAGAGTTGA+TGG + chr3_3:66265609-66265628 None:intergenic 35.0%
TCTTCCTAATTTGATGCACT+TGG - chr3_3:66265650-66265669 Msa0465800:intron 35.0%
!! GGTTATGGTTTTACAGAAGT+TGG - chr3_3:66265816-66265835 Msa0465800:intron 35.0%
CTCCCGAAGTTAAAATACAT+CGG + chr3_3:66265925-66265944 None:intergenic 35.0%
CTTGAAATCAGTGTAGTCAA+AGG + chr3_3:66265973-66265992 None:intergenic 35.0%
!! TTGACTACACTGATTTCAAG+AGG - chr3_3:66265973-66265992 Msa0465800:intron 35.0%
!! AGTTTAGTCTTGAAAGCAGA+TGG + chr3_3:66266097-66266116 None:intergenic 35.0%
ACATCTTTGGTAGAATTTCC+AGG - chr3_3:66266192-66266211 Msa0465800:intron 35.0%
CCTCGAAAGTTGTTAAAGTA+GGG + chr3_3:66266229-66266248 None:intergenic 35.0%
ATTAGAGACAATGAGATGCA+GGG + chr3_3:66266409-66266428 None:intergenic 35.0%
AATTAGAGACAATGAGATGC+AGG + chr3_3:66266410-66266429 None:intergenic 35.0%
! TTTTACATAGGTGAAAGCAG+AGG - chr3_3:66266428-66266447 Msa0465800:intron 35.0%
TATTGATGCTTATGCACCTA+AGG - chr3_3:66266452-66266471 Msa0465800:intron 35.0%
GTTACAATAAGCAGATCCTT+AGG + chr3_3:66266471-66266490 None:intergenic 35.0%
GATCTGCTTATTGTAACAAC+TGG - chr3_3:66266474-66266493 Msa0465800:intron 35.0%
! GCCTTAAATCTTGCATCTTT+TGG - chr3_3:66266618-66266637 Msa0465800:CDS 35.0%
ATTCATCATTTCCATCACAC+GGG + chr3_3:66266918-66266937 None:intergenic 35.0%
GATTCATCATTTCCATCACA+CGG + chr3_3:66266919-66266938 None:intergenic 35.0%
ATGAATCGCATATCAGAGAT+TGG - chr3_3:66266932-66266951 Msa0465800:intron 35.0%
TCGATACGTAAACTAAAAGG+AGG + chr3_3:66267061-66267080 None:intergenic 35.0%
TATTACAACTCTGCTAACCA+AGG - chr3_3:66267147-66267166 Msa0465800:intron 35.0%
TGTACAGGAAGAAAATGTTG+CGG + chr3_3:66267658-66267677 None:intergenic 35.0%
! CAACATTTTCTTCCTGTACA+TGG - chr3_3:66267658-66267677 Msa0465800:CDS 35.0%
AACAAGTATTCTCCATGTAC+AGG + chr3_3:66267673-66267692 None:intergenic 35.0%
GAATCACTTGGAAAATCAAC+TGG - chr3_3:66267706-66267725 Msa0465800:CDS 35.0%
TTGGAAAATCAACTGGCATT+CGG - chr3_3:66267713-66267732 Msa0465800:intron 35.0%
CTTTATCACAAGATCTGTCT+GGG + chr3_3:66267762-66267781 None:intergenic 35.0%
TCTTTATCACAAGATCTGTC+TGG + chr3_3:66267763-66267782 None:intergenic 35.0%
ATGCACCAGGTTATTAAGAA+TGG - chr3_3:66267843-66267862 Msa0465800:CDS 35.0%
TCTCTCCATTCTTAATAACC+TGG + chr3_3:66267851-66267870 None:intergenic 35.0%
ATTAAGAATGGAGAGATGCT+TGG - chr3_3:66267855-66267874 Msa0465800:CDS 35.0%
TCTAATGGTTTCATTTCCCT+TGG - chr3_3:66267909-66267928 Msa0465800:CDS 35.0%
TAGATGGCATCATTGTGATT+AGG - chr3_3:66268112-66268131 Msa0465800:intron 35.0%
GAATTACCACAAGATGTCTA+TGG - chr3_3:66268276-66268295 Msa0465800:intron 35.0%
TATCGCAATGGCAATTACTT+CGG + chr3_3:66268450-66268469 None:intergenic 35.0%
ATATTGAACTGTCAACTGCT+GGG - chr3_3:66268640-66268659 Msa0465800:CDS 35.0%
!! CTGCTTTTACCATGGATATA+TGG + chr3_3:66268788-66268807 None:intergenic 35.0%
TATGTGAACCGATCTAACTA+TGG - chr3_3:66269006-66269025 Msa0465800:intron 35.0%
AAGCTAAGAAGTCTCACTTT+GGG - chr3_3:66269109-66269128 Msa0465800:intron 35.0%
TTTGGGTGTAAATCTTGAGA+CGG - chr3_3:66269126-66269145 Msa0465800:intron 35.0%
AAGGCGATTTATCTGATTCA+GGG - chr3_3:66269384-66269403 Msa0465800:intron 35.0%
TTTATCTGATTCAGGGGAAT+CGG - chr3_3:66269391-66269410 Msa0465800:intron 35.0%
! TCAACTGATGATGCAATGAA+TGG + chr3_3:66269431-66269450 None:intergenic 35.0%
CAATGGTTATGTTTCACGAA+AGG - chr3_3:66269469-66269488 Msa0465800:intron 35.0%
ATCAGACATTTCTTCAGACT+TGG + chr3_3:66269543-66269562 None:intergenic 35.0%
!!! TTTACTGATTTTGGAGACTC+TGG + chr3_3:66269572-66269591 None:intergenic 35.0%
!! TCAAGAAGCTGATTGATTTG+CGG - chr3_3:66269618-66269637 Msa0465800:intron 35.0%
TAAAGTTGTGAAAGGAAGGA+TGG - chr3_3:66269661-66269680 Msa0465800:intron 35.0%
CAAATCTTTGTGGACATCTT+TGG - chr3_3:66269748-66269767 Msa0465800:intron 35.0%
AGGGAGAAAATTTCATGGAT+TGG + chr3_3:66269959-66269978 None:intergenic 35.0%
TCAAGGTCAATTTAGTACGA+GGG + chr3_3:66269978-66269997 None:intergenic 35.0%
CTGATATAGAAGTTTCCTCA+AGG + chr3_3:66269995-66270014 None:intergenic 35.0%
TGAAACTACAACTTACATGG+CGG - chr3_3:66270194-66270213 Msa0465800:intron 35.0%
AAGCAATTGAAGGGAAGATT+AGG + chr3_3:66270231-66270250 None:intergenic 35.0%
AAAGGGTAATGTACTACCTA+TGG + chr3_3:66270322-66270341 None:intergenic 35.0%
! CATTACCCTTTTATCATTGC+TGG - chr3_3:66270331-66270350 Msa0465800:CDS 35.0%
CGAAAAAAGACAGAGTTGAA+CGG + chr3_3:66270415-66270434 None:intergenic 35.0%
! TTCAGCTTTAGTACAAGTGT+AGG - chr3_3:66270545-66270564 Msa0465800:intron 35.0%
TCTAATCAGGAGATCAAGAA+TGG - chr3_3:66270629-66270648 Msa0465800:intron 35.0%
CTAATCAGGAGATCAAGAAT+GGG - chr3_3:66270630-66270649 Msa0465800:intron 35.0%
AATATCTTGAGGACATGGAA+AGG - chr3_3:66270675-66270694 Msa0465800:intron 35.0%
ATTGTCTAGTGATGAAACAC+CGG - chr3_3:66270700-66270719 Msa0465800:intron 35.0%
CAAATTGAATGGAAATGTGG+TGG - chr3_3:66270726-66270745 Msa0465800:intron 35.0%
!! GCTATATTTTGGAAATGTGG+CGG - chr3_3:66270773-66270792 Msa0465800:CDS 35.0%
!! CTATATTTTGGAAATGTGGC+GGG - chr3_3:66270774-66270793 Msa0465800:CDS 35.0%
ATCCATCATTTACATGGTTC+TGG - chr3_3:66270841-66270860 Msa0465800:CDS 35.0%
TACCAGAACCATGTAAATGA+TGG + chr3_3:66270846-66270865 None:intergenic 35.0%
!! TTTACATGGTTCTGGTAACA+TGG - chr3_3:66270849-66270868 Msa0465800:CDS 35.0%
CCTTAGCCCTAAAAGAATTA+TGG + chr3_3:66270893-66270912 None:intergenic 35.0%
!!! CCATAATTCTTTTAGGGCTA+AGG - chr3_3:66270890-66270909 Msa0465800:intron 35.0%
!!! TCTTTTAGGGCTAAGGTAAT+AGG - chr3_3:66270897-66270916 Msa0465800:intron 35.0%
ATAGGCAACATAAAAGGGAT+TGG - chr3_3:66270915-66270934 Msa0465800:intron 35.0%
! CTATCAAGGGAAAGAGTATA+TGG - chr3_3:66270961-66270980 Msa0465800:intron 35.0%
!! GGAAAGAGTATATGGGTTTT+AGG - chr3_3:66270969-66270988 Msa0465800:intron 35.0%
!!! AAGAGTATATGGGTTTTAGG+GGG - chr3_3:66270972-66270991 Msa0465800:intron 35.0%
AAACAAAAATATTGGGGCGT+GGG + chr3_3:66271026-66271045 None:intergenic 35.0%
! ATTTTGTTAGTGGCACGTTT+TGG - chr3_3:66271090-66271109 Msa0465800:CDS 35.0%
! TTTTGTTAGTGGCACGTTTT+GGG - chr3_3:66271091-66271110 Msa0465800:CDS 35.0%
GCAAATCAAGCTATCATCAA+GGG + chr3_3:66271196-66271215 None:intergenic 35.0%
AGCAAATCAAGCTATCATCA+AGG + chr3_3:66271197-66271216 None:intergenic 35.0%
!! GAAAGAGTGTTGTTGATAGC+GGG + chr3_3:66262067-66262086 None:intergenic 40.0%
TCCATAGCATAGCATAGCAT+AGG - chr3_3:66262092-66262111 Msa0465800:three_prime_UTR 40.0%
ACCTATGCTATGCTATGCTA+TGG + chr3_3:66262096-66262115 None:intergenic 40.0%
TAGCATAGCATAGCATAGGT+AGG - chr3_3:66262096-66262115 Msa0465800:three_prime_UTR 40.0%
AGCATAGCATAGCATAGGTA+GGG - chr3_3:66262097-66262116 Msa0465800:three_prime_UTR 40.0%
!! TGAGAGTGTTGAAGCTGAAA+CGG + chr3_3:66262216-66262235 None:intergenic 40.0%
AATGCACGAGTAGGAAATGA+TGG - chr3_3:66262353-66262372 Msa0465800:three_prime_UTR 40.0%
! CTAGAGTACCACACAAAAGA+AGG - chr3_3:66262384-66262403 Msa0465800:three_prime_UTR 40.0%
TGGAAGATTCTGTTCAACGT+AGG - chr3_3:66262435-66262454 Msa0465800:three_prime_UTR 40.0%
AGATTCTGTTCAACGTAGGA+TGG - chr3_3:66262439-66262458 Msa0465800:three_prime_UTR 40.0%
ATAGGAAGAACACGTAATGG+CGG + chr3_3:66262491-66262510 None:intergenic 40.0%
CCAATAGGAAGAACACGTAA+TGG + chr3_3:66262494-66262513 None:intergenic 40.0%
CCATTACGTGTTCTTCCTAT+TGG - chr3_3:66262491-66262510 Msa0465800:three_prime_UTR 40.0%
TTACGTGTTCTTCCTATTGG+TGG - chr3_3:66262494-66262513 Msa0465800:three_prime_UTR 40.0%
! TGTTCTTCCTATTGGTGGTT+TGG - chr3_3:66262499-66262518 Msa0465800:three_prime_UTR 40.0%
! GTTCTTCCTATTGGTGGTTT+GGG - chr3_3:66262500-66262519 Msa0465800:three_prime_UTR 40.0%
ATTTCACCCAAACCACCAAT+AGG + chr3_3:66262509-66262528 None:intergenic 40.0%
! ATTGGTGGTTTGGGTGAAAT+TGG - chr3_3:66262509-66262528 Msa0465800:three_prime_UTR 40.0%
CGTTATATCCTCATTGATGC+TGG - chr3_3:66262563-66262582 Msa0465800:CDS 40.0%
ACATGATACCAGCATCAATG+AGG + chr3_3:66262574-66262593 None:intergenic 40.0%
TATCATGTTTCCCGAGTAAG+TGG - chr3_3:66262586-66262605 Msa0465800:CDS 40.0%
CTATTAAGGACCACTTACTC+GGG + chr3_3:66262599-66262618 None:intergenic 40.0%
! TTTTCCATAAGCTCTCTCTC+AGG + chr3_3:66262657-66262676 None:intergenic 40.0%
!! TTTTTCAGCTATGACGACCT+TGG - chr3_3:66262879-66262898 Msa0465800:intron 40.0%
GGTAATGCTTCCATCTCTAT+TGG - chr3_3:66263010-66263029 Msa0465800:intron 40.0%
! AGCACTCTTTTGTTCATGGA+AGG - chr3_3:66263165-66263184 Msa0465800:intron 40.0%
! ACTCTTTTGTTCATGGAAGG+AGG - chr3_3:66263168-66263187 Msa0465800:intron 40.0%
!! TAATTCTACAGTTGGTGGCT+CGG - chr3_3:66263283-66263302 Msa0465800:intron 40.0%
!! GTGCCTCATGTTTTAGACAT+AGG - chr3_3:66263309-66263328 Msa0465800:intron 40.0%
! GGACTCTTTGATAGGTTTTC+TGG - chr3_3:66263330-66263349 Msa0465800:intron 40.0%
TCGCTACAAGCTTGAACAAT+TGG - chr3_3:66263369-66263388 Msa0465800:intron 40.0%
ATATTTCCTTGGTTGGGACT+TGG - chr3_3:66263411-66263430 Msa0465800:intron 40.0%
TATTTCCTTGGTTGGGACTT+GGG - chr3_3:66263412-66263431 Msa0465800:intron 40.0%
!! AAATAGCCTTGTGACTTGTG+AGG + chr3_3:66263639-66263658 None:intergenic 40.0%
GTGTATTGGAATCCAATGCT+GGG + chr3_3:66263977-66263996 None:intergenic 40.0%
TGCATCTTCCTTTACAATGG+AGG - chr3_3:66264004-66264023 Msa0465800:intron 40.0%
ACAAAGAACAAGTTTGTCGC+TGG - chr3_3:66264363-66264382 Msa0465800:intron 40.0%
CAAAGAACAAGTTTGTCGCT+GGG - chr3_3:66264364-66264383 Msa0465800:intron 40.0%
ATAGAATGAGTCACCCTGAT+TGG + chr3_3:66264405-66264424 None:intergenic 40.0%
CATTCTATTCCTGACTGTTG+TGG - chr3_3:66264417-66264436 Msa0465800:intron 40.0%
! CTAGTTCTTCGTTGTTCTGA+TGG - chr3_3:66264441-66264460 Msa0465800:intron 40.0%
GATGGAACTATTCTTCACAC+TGG - chr3_3:66264459-66264478 Msa0465800:intron 40.0%
TGGAACTATTCTTCACACTG+GGG - chr3_3:66264461-66264480 Msa0465800:intron 40.0%
TTTCAGCAACAGGAGATTCA+AGG + chr3_3:66264541-66264560 None:intergenic 40.0%
TGAATCTCCTGTTGCTGAAA+AGG - chr3_3:66264541-66264560 Msa0465800:intron 40.0%
! GAATCAACCTTTTCAGCAAC+AGG + chr3_3:66264551-66264570 None:intergenic 40.0%
AGTAACATTGGTAAGTCACC+TGG - chr3_3:66264644-66264663 Msa0465800:intron 40.0%
GTAGTTAGTAGCAAAGATCC+AGG + chr3_3:66264665-66264684 None:intergenic 40.0%
GGATCTTTGCTACTAACTAC+TGG - chr3_3:66264665-66264684 Msa0465800:CDS 40.0%
GGCTACTAACAGTTTACTTG+AGG - chr3_3:66264777-66264796 Msa0465800:CDS 40.0%
AGTCCCTGTTAAGCTGAATA+TGG - chr3_3:66264852-66264871 Msa0465800:CDS 40.0%
ATCACAAGCAAACATGGCTT+TGG - chr3_3:66265213-66265232 Msa0465800:intron 40.0%
AGGCACATTTCAGCTTCAAA+AGG - chr3_3:66265325-66265344 Msa0465800:CDS 40.0%
GCATCAAATCTACATCGGAT+TGG - chr3_3:66265370-66265389 Msa0465800:CDS 40.0%
CGATTTAACTGGGAGAAAGT+TGG - chr3_3:66265411-66265430 Msa0465800:intron 40.0%
ATACTTAGAAGCAGCTTGGA+AGG - chr3_3:66265563-66265582 Msa0465800:CDS 40.0%
GTCACCAAGTGCATCAAATT+AGG + chr3_3:66265657-66265676 None:intergenic 40.0%
! AATTTGATGCACTTGGTGAC+TGG - chr3_3:66265657-66265676 Msa0465800:intron 40.0%
TAGTGTATGGTCCATGTGTT+GGG + chr3_3:66265711-66265730 None:intergenic 40.0%
ATAGTGTATGGTCCATGTGT+TGG + chr3_3:66265712-66265731 None:intergenic 40.0%
CAGCATGACTGTATAGTGTA+TGG + chr3_3:66265724-66265743 None:intergenic 40.0%
CCCTACTTTAACAACTTTCG+AGG - chr3_3:66266226-66266245 Msa0465800:intron 40.0%
GCCTCGAAAGTTGTTAAAGT+AGG + chr3_3:66266230-66266249 None:intergenic 40.0%
CCTTGGTAAGTTTGAAAGCA+TGG + chr3_3:66266650-66266669 None:intergenic 40.0%
CCATGCTTTCAAACTTACCA+AGG - chr3_3:66266647-66266666 Msa0465800:intron 40.0%
GGATTGGAAGTTAGAATAGC+AGG + chr3_3:66266793-66266812 None:intergenic 40.0%
!! AAGGTGTTGCTAGAAAGGAT+TGG + chr3_3:66266809-66266828 None:intergenic 40.0%
TCAATTTGTCAGGTTATCCC+TGG - chr3_3:66266884-66266903 Msa0465800:intron 40.0%
ACATGCATATCGTGGAGAAT+TGG - chr3_3:66267000-66267019 Msa0465800:intron 40.0%
AGAACAGGGAAAACATTGGA+AGG + chr3_3:66267226-66267245 None:intergenic 40.0%
AAGGAGAACAGGGAAAACAT+TGG + chr3_3:66267230-66267249 None:intergenic 40.0%
TCCCTGTTCTCCTTAGTATT+TGG - chr3_3:66267236-66267255 Msa0465800:intron 40.0%
CCCAAATACTAAGGAGAACA+GGG + chr3_3:66267240-66267259 None:intergenic 40.0%
CCCTGTTCTCCTTAGTATTT+GGG - chr3_3:66267237-66267256 Msa0465800:intron 40.0%
ACCCAAATACTAAGGAGAAC+AGG + chr3_3:66267241-66267260 None:intergenic 40.0%
TGGAGAATACTTGTTCCTGA+AGG - chr3_3:66267678-66267697 Msa0465800:CDS 40.0%
ACTGATGATCTTTATGCACC+AGG - chr3_3:66267830-66267849 Msa0465800:intron 40.0%
! AGTGATGGTGACAAAGCATT+TGG - chr3_3:66268045-66268064 Msa0465800:intron 40.0%
! GACAAAGCATTTGGTACATC+CGG - chr3_3:66268054-66268073 Msa0465800:intron 40.0%
TTCATCAAGGAAGAGTTCAC+CGG + chr3_3:66268076-66268095 None:intergenic 40.0%
TTGGCTGGAAACACCTTAAA+AGG - chr3_3:66268245-66268264 Msa0465800:intron 40.0%
TGGCTGGAAACACCTTAAAA+GGG - chr3_3:66268246-66268265 Msa0465800:intron 40.0%
TCACATGGAAAGAACTGTGT+CGG - chr3_3:66268382-66268401 Msa0465800:intron 40.0%
! TGAGGAAGTACAGTGGTAAA+CGG - chr3_3:66268423-66268442 Msa0465800:intron 40.0%
ATCGCAATGGCAATTACTTC+GGG + chr3_3:66268449-66268468 None:intergenic 40.0%
! TCCAGGATTTTCTATCGCAA+TGG + chr3_3:66268462-66268481 None:intergenic 40.0%
CATATTGAACTGTCAACTGC+TGG - chr3_3:66268639-66268658 Msa0465800:CDS 40.0%
!! ATCTGGTTGGTTCACTTTTG+TGG - chr3_3:66268663-66268682 Msa0465800:CDS 40.0%
TATCCATGGTAAAAGCAGTG+TGG - chr3_3:66268790-66268809 Msa0465800:CDS 40.0%
AAAATAGACCAGCTGAATGC+AGG + chr3_3:66268960-66268979 None:intergenic 40.0%
TCACAAAACAATGCTGGTGA+AGG - chr3_3:66269050-66269069 Msa0465800:intron 40.0%
GAAGCTAAGAAGTCTCACTT+TGG - chr3_3:66269108-66269127 Msa0465800:intron 40.0%
GAAGGCGATTTATCTGATTC+AGG - chr3_3:66269383-66269402 Msa0465800:intron 40.0%
AGGCGATTTATCTGATTCAG+GGG - chr3_3:66269385-66269404 Msa0465800:intron 40.0%
GTCTGAAGAAATGTCTGATG+CGG - chr3_3:66269544-66269563 Msa0465800:intron 40.0%
AATCAGCTTCTTGACTTCCT+CGG + chr3_3:66269612-66269631 None:intergenic 40.0%
CAACTTTAAATCTGTCACGG+AGG + chr3_3:66269649-66269668 None:intergenic 40.0%
AGAGATATCTCAGAGCTTGT+TGG - chr3_3:66269694-66269713 Msa0465800:intron 40.0%
CACAAAGATTTGCATTGTCC+AGG + chr3_3:66269740-66269759 None:intergenic 40.0%
CTGGACAATGCAAATCTTTG+TGG - chr3_3:66269738-66269757 Msa0465800:intron 40.0%
GATCAGTTTGTGAGGTACAA+AGG - chr3_3:66269881-66269900 Msa0465800:intron 40.0%
GTACGAGGGAGAAAATTTCA+TGG + chr3_3:66269964-66269983 None:intergenic 40.0%
CTCAAGGTCAATTTAGTACG+AGG + chr3_3:66269979-66269998 None:intergenic 40.0%
CTCGTACTAAATTGACCTTG+AGG - chr3_3:66269977-66269996 Msa0465800:intron 40.0%
GCGTGAAACTACAACTTACA+TGG - chr3_3:66270191-66270210 Msa0465800:intron 40.0%
AGCTGTGTGAAGCAATTGAA+GGG + chr3_3:66270240-66270259 None:intergenic 40.0%
TAGCTGTGTGAAGCAATTGA+AGG + chr3_3:66270241-66270260 None:intergenic 40.0%
TTCAATTGCTTCACACAGCT+AGG - chr3_3:66270240-66270259 Msa0465800:intron 40.0%
AGTCGCCAGCAATGATAAAA+GGG + chr3_3:66270339-66270358 None:intergenic 40.0%
TAGTCGCCAGCAATGATAAA+AGG + chr3_3:66270340-66270359 None:intergenic 40.0%
TTGGCAATATCTTGAGGACA+TGG - chr3_3:66270670-66270689 Msa0465800:intron 40.0%
AACACCGGCAACAAATTGAA+TGG - chr3_3:66270715-66270734 Msa0465800:intron 40.0%
GTTCTGGTAACATGGACAAT+TGG - chr3_3:66270857-66270876 Msa0465800:CDS 40.0%
! CTTAGCTTGGGTTAGAATCA+AGG + chr3_3:66270941-66270960 None:intergenic 40.0%
TAACCCAAGCTAAGCTATCA+AGG - chr3_3:66270947-66270966 Msa0465800:intron 40.0%
AACCCAAGCTAAGCTATCAA+GGG - chr3_3:66270948-66270967 Msa0465800:intron 40.0%
! TTCCCTTGATAGCTTAGCTT+GGG + chr3_3:66270953-66270972 None:intergenic 40.0%
! TTTCCCTTGATAGCTTAGCT+TGG + chr3_3:66270954-66270973 None:intergenic 40.0%
!!! AGAGTATATGGGTTTTAGGG+GGG - chr3_3:66270973-66270992 Msa0465800:intron 40.0%
GAAACAAAAATATTGGGGCG+TGG + chr3_3:66271027-66271046 None:intergenic 40.0%
TGTAAATGTCTTCTGCGTTG+TGG - chr3_3:66271125-66271144 Msa0465800:exon 40.0%
!! GTGTTGTTGATAGCGGGAAA+TGG + chr3_3:66262061-66262080 None:intergenic 45.0%
!! AGAGTCTGGTTGGTTTAGAG+CGG + chr3_3:66262193-66262212 None:intergenic 45.0%
AATGTTGTTGTCGCTACCTG+AGG + chr3_3:66262240-66262259 None:intergenic 45.0%
!! AGAGATGGAAGCATTACCCA+AGG + chr3_3:66263008-66263027 None:intergenic 45.0%
TTCCATCTCTATTGGACTGC+TGG - chr3_3:66263018-66263037 Msa0465800:intron 45.0%
!! AATTCTACAGTTGGTGGCTC+GGG - chr3_3:66263284-66263303 Msa0465800:intron 45.0%
!!! ATAGGTTTTCTGGCTACCTG+TGG - chr3_3:66263340-66263359 Msa0465800:intron 45.0%
CAAAGAGGCTGCTGCATAAT+AGG - chr3_3:66263735-66263754 Msa0465800:CDS 45.0%
GGTGTATTGGAATCCAATGC+TGG + chr3_3:66263978-66263997 None:intergenic 45.0%
GCCGAATACCTCCATTGTAA+AGG + chr3_3:66264015-66264034 None:intergenic 45.0%
TATTCTGTCCATTGCAGTCC+AGG - chr3_3:66264250-66264269 Msa0465800:intron 45.0%
ATTCTGTCCATTGCAGTCCA+GGG - chr3_3:66264251-66264270 Msa0465800:intron 45.0%
AGAACTAGTCCACAACAGTC+AGG + chr3_3:66264429-66264448 None:intergenic 45.0%
CTATTCTTCACACTGGGGAT+TGG - chr3_3:66264466-66264485 Msa0465800:intron 45.0%
ATTGACGAGACACCACTTGA+TGG - chr3_3:66264576-66264595 Msa0465800:intron 45.0%
TTGACGAGACACCACTTGAT+GGG - chr3_3:66264577-66264596 Msa0465800:intron 45.0%
! TGGGAAAGTTTTTGATCGGG+AGG - chr3_3:66264596-66264615 Msa0465800:intron 45.0%
! GGGAAAGTTTTTGATCGGGA+GGG - chr3_3:66264597-66264616 Msa0465800:intron 45.0%
! TTTTGATCGGGAGGGTTTAG+AGG - chr3_3:66264605-66264624 Msa0465800:intron 45.0%
TCAACAAATGTGCTCTCACC+TGG - chr3_3:66265262-66265281 Msa0465800:intron 45.0%
GACAACCAGTGAATCTGTTG+TGG - chr3_3:66265288-66265307 Msa0465800:intron 45.0%
ATCTGCCACAACAGATTCAC+TGG + chr3_3:66265296-66265315 None:intergenic 45.0%
!! AAAGCTGCTGCCGATTTAAC+TGG - chr3_3:66265400-66265419 Msa0465800:intron 45.0%
!! AAGCTGCTGCCGATTTAACT+GGG - chr3_3:66265401-66265420 Msa0465800:intron 45.0%
GGACATACTTAGAAGCAGCT+TGG - chr3_3:66265559-66265578 Msa0465800:CDS 45.0%
TTAGAAGCAGCTTGGAAGGA+TGG - chr3_3:66265567-66265586 Msa0465800:CDS 45.0%
TCCATTTGACCCATCAACTC+TGG - chr3_3:66265596-66265615 Msa0465800:CDS 45.0%
!! ACCAGAGTTGATGGGTCAAA+TGG + chr3_3:66265600-66265619 None:intergenic 45.0%
TATGGTCCATGTGTTGGGAT+GGG + chr3_3:66265706-66265725 None:intergenic 45.0%
AGCAGAAATGCAGTGCATGT+AGG - chr3_3:66265784-66265803 Msa0465800:intron 45.0%
! TGTAGGCAAGTCACTGGTTA+TGG - chr3_3:66265801-66265820 Msa0465800:intron 45.0%
AGTAGGGAGTAAATACTGCC+TGG + chr3_3:66266213-66266232 None:intergenic 45.0%
ACATCTGGACATGCATATCG+TGG - chr3_3:66266992-66267011 Msa0465800:intron 45.0%
GAGGTGATTGTCTATCTTCG+TGG - chr3_3:66267270-66267289 Msa0465800:intron 45.0%
CAAGTGATTCATGCTCCTTC+AGG + chr3_3:66267696-66267715 None:intergenic 45.0%
! CTGAAGGAGCATGAATCACT+TGG - chr3_3:66267694-66267713 Msa0465800:CDS 45.0%
TATCACAAGATCTGTCTGGG+AGG + chr3_3:66267759-66267778 None:intergenic 45.0%
TACCACAAGATGTCTATGGC+TGG - chr3_3:66268280-66268299 Msa0465800:intron 45.0%
AGATGTCTATGGCTGGACAA+AGG - chr3_3:66268287-66268306 Msa0465800:intron 45.0%
GATGTCTATGGCTGGACAAA+GGG - chr3_3:66268288-66268307 Msa0465800:intron 45.0%
AGATGTTGAGGAAGATGGTG+AGG - chr3_3:66268405-66268424 Msa0465800:intron 45.0%
! AAGATGGTGAGGAAGTACAG+TGG - chr3_3:66268416-66268435 Msa0465800:intron 45.0%
GCCATTGCGATAGAAAATCC+TGG - chr3_3:66268458-66268477 Msa0465800:intron 45.0%
TCATCAGCAAAAACTGCTCC+AGG + chr3_3:66268479-66268498 None:intergenic 45.0%
TGATATTCCAGGACCAACGT+GGG + chr3_3:66268528-66268547 None:intergenic 45.0%
TTGATATTCCAGGACCAACG+TGG + chr3_3:66268529-66268548 None:intergenic 45.0%
! GTTACCTCTTGTTTGCAGTG+TGG + chr3_3:66268597-66268616 None:intergenic 45.0%
CCATGGATATATGGGATCGT+TGG + chr3_3:66268779-66268798 None:intergenic 45.0%
CCAACGATCCCATATATCCA+TGG - chr3_3:66268776-66268795 Msa0465800:CDS 45.0%
GTTATTGGCATGTGACACTC+AGG - chr3_3:66268932-66268951 Msa0465800:CDS 45.0%
!! GATGATGGCATTGACACAGA+AGG - chr3_3:66269323-66269342 Msa0465800:intron 45.0%
GAGAAAGAGACCACTACAAC+TGG - chr3_3:66269356-66269375 Msa0465800:intron 45.0%
! CAGGGGAATCGGATGAATTT+TGG - chr3_3:66269402-66269421 Msa0465800:intron 45.0%
AATGACCACAAGTCTGAGCT+AGG - chr3_3:66270804-66270823 Msa0465800:CDS 45.0%
AAATGTCTTCTGCGTTGTGG+TGG - chr3_3:66271128-66271147 Msa0465800:five_prime_UTR 45.0%
!! TCTGGTTGGTTTAGAGCGGA+GGG + chr3_3:66262189-66262208 None:intergenic 50.0%
TGAAGCTGAAACGGAGAGTC+TGG + chr3_3:66262207-66262226 None:intergenic 50.0%
CCATAAGCTCTCTCTCAGGA+TGG + chr3_3:66262653-66262672 None:intergenic 50.0%
CCATCCTGAGAGAGAGCTTA+TGG - chr3_3:66262650-66262669 Msa0465800:intron 50.0%
ATCATATCGGTGCGTTGCCT+TGG - chr3_3:66262988-66263007 Msa0465800:intron 50.0%
TCATATCGGTGCGTTGCCTT+GGG - chr3_3:66262989-66263008 Msa0465800:intron 50.0%
AGCCAGCAGTCCAATAGAGA+TGG + chr3_3:66263023-66263042 None:intergenic 50.0%
TCATCAGGTCATCCCAGCAT+TGG - chr3_3:66263962-66263981 Msa0465800:intron 50.0%
TCTTCACACTGGGGATTGGA+AGG - chr3_3:66264470-66264489 Msa0465800:intron 50.0%
! GAAGAGCATGAGAGTTTCGC+AGG - chr3_3:66264756-66264775 Msa0465800:CDS 50.0%
! TTGTGGTGATGCTCTCTGAG+CGG - chr3_3:66264820-66264839 Msa0465800:CDS 50.0%
TTCATGGTCAGTTGCAGTGC+TGG - chr3_3:66264877-66264896 Msa0465800:CDS 50.0%
! GTGCTGGTAGATCTGCTCAA+AGG - chr3_3:66264893-66264912 Msa0465800:CDS 50.0%
CAAATGTGCTCTCACCTGGA+AGG - chr3_3:66265266-66265285 Msa0465800:intron 50.0%
! GATTCACTGGTTGTCCTTCC+AGG + chr3_3:66265283-66265302 None:intergenic 50.0%
AGCAGCTTGGAAGGATGGAA+AGG - chr3_3:66265572-66265591 Msa0465800:CDS 50.0%
ATGGTCCATGTGTTGGGATG+GGG + chr3_3:66265705-66265724 None:intergenic 50.0%
GTATGGTCCATGTGTTGGGA+TGG + chr3_3:66265707-66265726 None:intergenic 50.0%
AGTGCATGTAGGCAAGTCAC+TGG - chr3_3:66265795-66265814 Msa0465800:intron 50.0%
! GCAAGATTTAAGGCAGCACG+TGG + chr3_3:66266612-66266631 None:intergenic 50.0%
TCACACGGGACTCATTACCA+GGG + chr3_3:66266904-66266923 None:intergenic 50.0%
ATCACACGGGACTCATTACC+AGG + chr3_3:66266905-66266924 None:intergenic 50.0%
! TGGTAATGAGTCCCGTGTGA+TGG - chr3_3:66266904-66266923 Msa0465800:intron 50.0%
GTCCAGCCATAGACATCTTG+TGG + chr3_3:66268285-66268304 None:intergenic 50.0%
!! TGAGCCAGTGGACTTTTGAC+GGG + chr3_3:66268365-66268384 None:intergenic 50.0%
!! GTGAGCCAGTGGACTTTTGA+CGG + chr3_3:66268366-66268385 None:intergenic 50.0%
!! CAAAAGTCCACTGGCTCACA+TGG - chr3_3:66268367-66268386 Msa0465800:intron 50.0%
GTTCTTTCCATGTGAGCCAG+TGG + chr3_3:66268377-66268396 None:intergenic 50.0%
GAACTGTGTCGGAGATGTTG+AGG - chr3_3:66268393-66268412 Msa0465800:intron 50.0%
GTCGGAGATGTTGAGGAAGA+TGG - chr3_3:66268400-66268419 Msa0465800:intron 50.0%
TTGTCTGGCAAATCCCACGT+TGG - chr3_3:66268512-66268531 Msa0465800:intron 50.0%
!! TTGTTTGCAGTGTGGTGGAC+TGG + chr3_3:66268589-66268608 None:intergenic 50.0%
TCCACCACACTGCAAACAAG+AGG - chr3_3:66268590-66268609 Msa0465800:intron 50.0%
! ACCTCTTGTTTGCAGTGTGG+TGG + chr3_3:66268594-66268613 None:intergenic 50.0%
AACTGTCAACTGCTGGGATC+TGG - chr3_3:66268646-66268665 Msa0465800:CDS 50.0%
!! CTGCCACACTGCTTTTACCA+TGG + chr3_3:66268796-66268815 None:intergenic 50.0%
CATGGTAAAAGCAGTGTGGC+AGG - chr3_3:66268794-66268813 Msa0465800:CDS 50.0%
GGGTGTAAATCTTGAGACGG+TGG - chr3_3:66269129-66269148 Msa0465800:intron 50.0%
ACCACTACAACTGGAGCTGA+AGG - chr3_3:66269365-66269384 Msa0465800:intron 50.0%
TGAAAGGAAGGATGGCTCTC+TGG - chr3_3:66269669-66269688 Msa0465800:intron 50.0%
GAAAGGAAGGATGGCTCTCT+GGG - chr3_3:66269670-66269689 Msa0465800:intron 50.0%
!! TCTCAGAGCTTGTTGGCTGA+TGG - chr3_3:66269701-66269720 Msa0465800:intron 50.0%
!! CTCAGAGCTTGTTGGCTGAT+GGG - chr3_3:66269702-66269721 Msa0465800:intron 50.0%
! ACAACTTACATGGCGGAGTG+AGG - chr3_3:66270201-66270220 Msa0465800:intron 50.0%
! TTTAGAGCGGAGGGAGAGGA+GGG + chr3_3:66262180-66262199 None:intergenic 55.0%
! TTGGTTTAGAGCGGAGGGAG+AGG + chr3_3:66262184-66262203 None:intergenic 55.0%
!! GTCTGGTTGGTTTAGAGCGG+AGG + chr3_3:66262190-66262209 None:intergenic 55.0%
GCTGAAACGGAGAGTCTGGT+TGG + chr3_3:66262203-66262222 None:intergenic 55.0%
GCTTCAACACTCTCAGCCTC+AGG - chr3_3:66262221-66262240 Msa0465800:three_prime_UTR 55.0%
CTTGTAGCGAAGTGTGCCAC+AGG + chr3_3:66263359-66263378 None:intergenic 55.0%
GTAGTCCCAAGTCCCAACCA+AGG + chr3_3:66263420-66263439 None:intergenic 55.0%
TGTGGGCCTCACAAGTCACA+AGG - chr3_3:66263630-66263649 Msa0465800:CDS 55.0%
CTGGGATGACCTGATGAACC+AGG + chr3_3:66263959-66263978 None:intergenic 55.0%
TGTCCATTGCAGTCCAGGGA+AGG - chr3_3:66264255-66264274 Msa0465800:intron 55.0%
TCACCTTCCCTGGACTGCAA+TGG + chr3_3:66264261-66264280 None:intergenic 55.0%
TGGTCCATGTGTTGGGATGG+GGG + chr3_3:66265704-66265723 None:intergenic 55.0%
GTGGCCCTGAGTATGCTCTT+TGG - chr3_3:66267952-66267971 Msa0465800:CDS 55.0%
! GGGGCCAAAGAGCATACTCA+GGG + chr3_3:66267959-66267978 None:intergenic 55.0%
! AGGGGCCAAAGAGCATACTC+AGG + chr3_3:66267960-66267979 None:intergenic 55.0%
CTGTCCCGTCAAAAGTCCAC+TGG - chr3_3:66268358-66268377 Msa0465800:intron 55.0%
GTCAACTGCTGGGATCTGGT+TGG - chr3_3:66268650-66268669 Msa0465800:CDS 55.0%
CAGTGTGGCAGGCAACAATC+AGG - chr3_3:66268805-66268824 Msa0465800:CDS 55.0%
CTCAGGTTCCTGCATTCAGC+TGG - chr3_3:66268949-66268968 Msa0465800:intron 55.0%
GCCTTCAGCTCCAGTTGTAG+TGG + chr3_3:66269369-66269388 None:intergenic 55.0%
GATGGGATCAGCAGAAGTCC+TGG - chr3_3:66269719-66269738 Msa0465800:intron 55.0%
GGTCACCTAGCTCAGACTTG+TGG + chr3_3:66270812-66270831 None:intergenic 55.0%
CAAGTCTGAGCTAGGTGACC+AGG - chr3_3:66270812-66270831 Msa0465800:CDS 55.0%
GGAGTGAGGAAGTGGAGGGA+GGG + chr3_3:66262159-66262178 None:intergenic 60.0%
GGAGGGAGTGAGGAAGTGGA+GGG + chr3_3:66262163-66262182 None:intergenic 60.0%
AGGAGGGAGTGAGGAAGTGG+AGG + chr3_3:66262164-66262183 None:intergenic 60.0%
GAGAGGAGGGAGTGAGGAAG+TGG + chr3_3:66262167-66262186 None:intergenic 60.0%
! GTTTAGAGCGGAGGGAGAGG+AGG + chr3_3:66262181-66262200 None:intergenic 60.0%
!! TCTACAGTTGGTGGCTCGGG+AGG - chr3_3:66263287-66263306 Msa0465800:intron 60.0%
CTACCCCCCATCCCAACACA+TGG - chr3_3:66265697-66265716 Msa0465800:intron 60.0%
GGTCCATGTGTTGGGATGGG+GGG + chr3_3:66265703-66265722 None:intergenic 60.0%
GGCAAATCCCACGTTGGTCC+TGG - chr3_3:66268518-66268537 Msa0465800:intron 60.0%
ATTGGGGCGTGGGCGTGTAT+TGG + chr3_3:66271016-66271035 None:intergenic 60.0%
GTGAGGAAGTGGAGGGAGGG+AGG + chr3_3:66262156-66262175 None:intergenic 65.0%
GGGAGTGAGGAAGTGGAGGG+AGG + chr3_3:66262160-66262179 None:intergenic 65.0%
CGGAGGGAGAGGAGGGAGTG+AGG + chr3_3:66262173-66262192 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66262001 66271265 66262001 ID=Msa0465800;Name=Msa0465800
chr3_3 mRNA 66262001 66271265 66262001 ID=Msa0465800-mRNA-1;Parent=Msa0465800;Name=Msa0465800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=139|0.81|0.76|0.94|0.87|0.88|17|532|907
chr3_3 exon 66262001 66262628 66262001 ID=Msa0465800-mRNA-1:exon:14991;Parent=Msa0465800-mRNA-1
chr3_3 exon 66263482 66263942 66263482 ID=Msa0465800-mRNA-1:exon:14990;Parent=Msa0465800-mRNA-1
chr3_3 exon 66264655 66265055 66264655 ID=Msa0465800-mRNA-1:exon:14989;Parent=Msa0465800-mRNA-1
chr3_3 exon 66265133 66265230 66265133 ID=Msa0465800-mRNA-1:exon:14988;Parent=Msa0465800-mRNA-1
chr3_3 exon 66265319 66265414 66265319 ID=Msa0465800-mRNA-1:exon:14987;Parent=Msa0465800-mRNA-1
chr3_3 exon 66265522 66265635 66265522 ID=Msa0465800-mRNA-1:exon:14986;Parent=Msa0465800-mRNA-1
chr3_3 exon 66266245 66266370 66266245 ID=Msa0465800-mRNA-1:exon:14985;Parent=Msa0465800-mRNA-1
chr3_3 exon 66266571 66266663 66266571 ID=Msa0465800-mRNA-1:exon:14984;Parent=Msa0465800-mRNA-1
chr3_3 exon 66266763 66266828 66266763 ID=Msa0465800-mRNA-1:exon:14983;Parent=Msa0465800-mRNA-1
chr3_3 exon 66267418 66267477 66267418 ID=Msa0465800-mRNA-1:exon:14982;Parent=Msa0465800-mRNA-1
chr3_3 exon 66267649 66267729 66267649 ID=Msa0465800-mRNA-1:exon:14981;Parent=Msa0465800-mRNA-1
chr3_3 exon 66267834 66268016 66267834 ID=Msa0465800-mRNA-1:exon:14980;Parent=Msa0465800-mRNA-1
chr3_3 exon 66268613 66268966 66268613 ID=Msa0465800-mRNA-1:exon:14979;Parent=Msa0465800-mRNA-1
chr3_3 exon 66269241 66269297 66269241 ID=Msa0465800-mRNA-1:exon:14978;Parent=Msa0465800-mRNA-1
chr3_3 exon 66270256 66270416 66270256 ID=Msa0465800-mRNA-1:exon:14977;Parent=Msa0465800-mRNA-1
chr3_3 exon 66270727 66270900 66270727 ID=Msa0465800-mRNA-1:exon:14976;Parent=Msa0465800-mRNA-1
chr3_3 exon 66271024 66271265 66271024 ID=Msa0465800-mRNA-1:exon:14975;Parent=Msa0465800-mRNA-1
chr3_3 five_prime_UTR 66271127 66271265 66271127 ID=Msa0465800-mRNA-1:five_prime_utr;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66271024 66271126 66271024 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66270727 66270900 66270727 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66270256 66270416 66270256 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66269241 66269297 66269241 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66268613 66268966 66268613 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66267834 66268016 66267834 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66267649 66267729 66267649 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66267418 66267477 66267418 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66266763 66266828 66266763 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66266571 66266663 66266571 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66266245 66266370 66266245 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66265522 66265635 66265522 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66265319 66265414 66265319 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66265133 66265230 66265133 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66264655 66265055 66264655 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66263482 66263942 66263482 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 CDS 66262533 66262628 66262533 ID=Msa0465800-mRNA-1:cds;Parent=Msa0465800-mRNA-1
chr3_3 three_prime_UTR 66262001 66262532 66262001 ID=Msa0465800-mRNA-1:three_prime_utr;Parent=Msa0465800-mRNA-1
Gene Sequence

>Msa0465800

ATGGCTACTCTCACCTCCCTCCCTCCACTTCCTCACTCCCTCCTCTCCCTCCGCTCTAAACCAACCAGACTCTCCGTTTCAGCTTCAACACTCTCAGCCTCAGGAAATGATGGATCTAATTCTAGAGTACCACACAAAAGAAGGAGAAGAATTGAAGGTCCAAGAAAAAGTATGGAAGATTCTGTTCAACGTAGGATGGAGCAATTTTATGAAGGAAACGACGGACCGCCATTACGTGTTCTTCCTATTGGTGGTTTGGGTGAAATTGGAATGAATTTAATTTTTGTATGTATGCATTTGGTGCGATTTTTCAGCTATGACGACCTTGGAGTACAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAAGATCATATCGGTGCGTTGCCTTGGGTCATCCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGCATTTTCCTTACATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTCGCTGGGCCATTTGAGATAGAACCAATCAGGGTGACTCATTCTATTCCTGACTGTTGTGGACTAGTTCTTCGTTGTTCTGATGGAACTATTCTTCACACTGGGGATTGGAAGGTCAGAATTTTACTTTTAATTCTCAGTGCATTGTACCTTTCATTTACCTTGAATCTCCTGTTGCTGAAAAGGTTGATTCATCAGATTGACGAGACACCACTTGATGGGAAAGTTTTTGATCGGGAGGGTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTGCTCTCACCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGATTCATTATTGAGGCACATTTCAGCTTCAAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATCTACATCGGATTGGAAGTGTCAAAGCTGCTGCCGATTTAACTGGGAGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGACCCATCAACTCTGAAATGCAGTGCATGTAGGCAAGTCACTGGTTATGGTTTTACAGAAGTTGGACAGAATACTGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACTGGCTCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTTTGGAAGTAGCCATGCTTTCAAACTTACCAAGGAAGATATTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCCCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGAAATGAAAACTTACACACATCTGGACATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATTGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGGCATACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTGAGAAATAGAAGGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAAAATTTACAGTTGAAATATAGTGATGGTGACAAAGCATTTGGTACATCCGGTGAACTCTTCCTTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGATTAGCATGGAAATATTTCGCCCTAAAAATTTAGAAAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGTCTATGGCTGGACAAAGGGAAGCTGTTAGATGCACTATATAAAGCTGCTCATGCAGCTCTTTCTAGCTGTCCCGTCAAAAGTCCACTGGCTCACATGGAAAGAACTGTGTCGGAGATGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCCGAAGTAATTGCCATTGCGATAGAAAATCCTGGAGCAGTTTTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCACGTTGGTCCTGGAATATCAACATTTAGAAGATCCATGGATGAACATAAAAAGGAAAACCAGTCCACCACACTGCAAACAAGAGATGATGGCATTGACACAGAAGGACTATTACTTGAGAAAGAGACCACTACAACTGGAGCTGAAGGCGATTTATCTGATTCAGGGGAATCGGATGAATTTTGGAAGCCATTCATTGCATCATCAGTTGAGAAATCAATCAAAGCAAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCAAATATAAAGCAAGATGATTCTGAAGACATAGATGAAGCCAAGTCTGAAGAAATGTCTGATGCGGAGCCAGAGTCTCCAAAATCAGTAAAGAAAAATAAATGGAAAACCGAGGAAGTCAAGAAGCTGATTGATTTGCGGAGTGACCTCCGTGACAGATTTAAAGTTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAATGCAAATCTTTGTGGACATCTTTGGCACTTAAATATGAGGAGATCAAGAATGGGAAAGATAGCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAGGATATTGTCTAGTGATGAAACACCGGCAACAAATTGA
Protein sequence

>Msa0465800

MATLTSLPPLPHSLLSLRSKPTRLSVSASTLSASGNDGSNSRVPHKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNLIFVCMHLVRFFSYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLTSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKVRILLLILSALYLSFTLNLLLLKRLIHQIDETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLKCSACRQVTGYGFTEVGQNTVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMNRISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERMRIALDGIIVISMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVKSPLAHMERTVSEMLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSHVGPGISTFRRSMDEHKKENQSTTLQTRDDGIDTEGLLLEKETTTTGAEGDLSDSGESDEFWKPFIASSVEKSIKANNGYVSRKEHKSNIKQDDSEDIDEAKSEEMSDAEPESPKSVKKNKWKTEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPATN*