AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1421870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421870 MtrunA17_Chr3g0116171 92.514 895 31 2 1 887 1 867 0.0 1669
Msa1421870 MtrunA17_Chr4g0057731 79.167 696 104 5 18 704 21 684 0.0 1100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421870 AT5G63420.1 65.976 917 244 10 1 886 32 911 0.0 1157

Find 242 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGACATTTACACATTTA+TGG 0.143360 tig0025315:-47560 None:intergenic
TCCAAAAGATGCAAGATTTA+AGG 0.149877 tig0025315:-43262 None:intergenic
GCCTTAAATCTTGCATCTTT+TGG 0.181875 tig0025315:+43261 Msa1421870:CDS
TTGGCTGGAAACACCTTAAA+AGG 0.186376 tig0025315:+44704 Msa1421870:CDS
TATTTGTTGGCATGTCTTTA+AGG 0.202740 tig0025315:+42188 Msa1421870:CDS
CAGGGGAATCGGATGAATTT+TGG 0.207468 tig0025315:+45861 Msa1421870:CDS
GGGCAGAATAAGAAATATTT+TGG 0.234453 tig0025315:+47204 Msa1421870:three_prime_UTR
CAAATCTTTGTGGACATCTT+TGG 0.240355 tig0025315:+46207 Msa1421870:CDS
CCTTAGCCCTAAAAGAATTA+TGG 0.243849 tig0025315:-47347 None:intergenic
AAGGGAATAGGCAACATAAA+AGG 0.266516 tig0025315:+47366 Msa1421870:three_prime_UTR
GGGAAAGAATATATGGGTTT+AGG 0.269435 tig0025315:+47425 Msa1421870:three_prime_UTR
ATTGGTGGTTTGGGTGAAAT+TGG 0.278425 tig0025315:+39156 Msa1421870:CDS
GATTCACTGGTTGTCCTTCC+AGG 0.285382 tig0025315:-41930 None:intergenic
CAAGTGATTCATGCTCCTTC+AGG 0.286343 tig0025315:-44152 None:intergenic
TTTCTTATAAATGTTGTATC+AGG 0.286634 tig0025315:-39568 None:intergenic
TTCATTCAGTGGATTGGTTT+TGG 0.292432 tig0025315:-38673 None:intergenic
CCATTACGTGTTCTTCCTAT+TGG 0.296621 tig0025315:+39138 Msa1421870:CDS
GAAGGCGATTTATCTGATTC+AGG 0.300145 tig0025315:+45842 Msa1421870:CDS
AAAGCTGCTGCCGATTTAAC+TGG 0.300725 tig0025315:+42050 Msa1421870:CDS
ATCCGTGGATGAACATAAAA+AGG 0.300824 tig0025315:+45018 Msa1421870:CDS
ATACAACATTTATAAGAAAA+TGG 0.305949 tig0025315:+39572 Msa1421870:CDS
CCTTGGAAAAGAAAATTTAC+AGG 0.307438 tig0025315:+44385 Msa1421870:CDS
CTATCAAGGGAAAGAATATA+TGG 0.316832 tig0025315:+47418 Msa1421870:three_prime_UTR
GTGAGGAAGTGGAGGGAGGG+AGG 0.319906 tig0025315:-38800 None:intergenic
ATCCATCATTTACATGGTTC+TGG 0.325333 tig0025315:+47298 Msa1421870:three_prime_UTR
TAGCATAGCATAGCATAGTT+AGG 0.332919 tig0025315:+38743 Msa1421870:five_prime_UTR
GGGAGTGAGGAAGTGGAGGG+AGG 0.343042 tig0025315:-38804 None:intergenic
GAGAGGAGGGAGTGAGGAAG+TGG 0.344758 tig0025315:-38811 None:intergenic
GATGTAGATTTGATGCAAAC+TGG 0.345615 tig0025315:-42013 None:intergenic
GGAAAGAATATATGGGTTTA+GGG 0.346300 tig0025315:+47426 Msa1421870:three_prime_UTR
TGAAAGGAAGGATGGCTCTC+TGG 0.354049 tig0025315:+46128 Msa1421870:CDS
CTTCTAAATGTTGATATTCC+AGG 0.354594 tig0025315:-44995 None:intergenic
ACCTCTTGTTTGCAGTGTGC+TGG 0.358922 tig0025315:-45050 None:intergenic
AATAGAAGGGTTCTTTCTAA+TGG 0.365515 tig0025315:+44353 Msa1421870:CDS
TGTTCTTCCTATTGGTGGTT+TGG 0.367711 tig0025315:+39146 Msa1421870:CDS
ATCTTTGGCACTTAAATATG+AGG 0.370175 tig0025315:+46222 Msa1421870:CDS
TTGTTTGCAGTGTGCTGGAC+TGG 0.371065 tig0025315:-45045 None:intergenic
CGGAGGGAGAGGAGGGAGTG+AGG 0.374912 tig0025315:-38817 None:intergenic
ATCATATCGGTGCGTTGCCT+TGG 0.376836 tig0025315:+39638 Msa1421870:CDS
TTATTATATCAGGTATTTGT+TGG 0.378839 tig0025315:+42175 Msa1421870:intron
ATTTCCATTCAATTTGTTGC+CGG 0.381999 tig0025315:-47176 None:intergenic
GTTCTTCCTATTGGTGGTTT+GGG 0.382494 tig0025315:+39147 Msa1421870:CDS
TTTCACACTTGAGAAATAGA+AGG 0.384172 tig0025315:+44339 Msa1421870:CDS
ATGCACCAGGTTATTAAGAA+TGG 0.386575 tig0025315:+44302 Msa1421870:intron
TTCCCTTGATAGCTTAGCTT+GGG 0.391980 tig0025315:-47407 None:intergenic
ATGGCAATGGCAATTACTTC+GGG 0.398343 tig0025315:-44905 None:intergenic
CAACTTTCTCCCAGTTAAAT+CGG 0.401807 tig0025315:-42060 None:intergenic
TGAATCTCCTGTTGCTGAAA+AGG 0.403407 tig0025315:+41189 Msa1421870:CDS
CTAGTTCTTCGTTGTTCTGA+TGG 0.406463 tig0025315:+41089 Msa1421870:CDS
TAGATGGCATCATTGTGATT+AGG 0.412496 tig0025315:+44571 Msa1421870:CDS
AATGAAAACTTACACACATC+TGG 0.415170 tig0025315:+43620 Msa1421870:CDS
AGAATGAGAATTGCATTAGA+TGG 0.417290 tig0025315:+44555 Msa1421870:CDS
TAACCCAAGCTAAGCTATCA+AGG 0.419408 tig0025315:+47404 Msa1421870:three_prime_UTR
ATTGGATCAACAATAGTTAT+GGG 0.421279 tig0025315:+43593 Msa1421870:CDS
GGCAAATCCCACGTTGGTCC+TGG 0.424025 tig0025315:+44977 Msa1421870:CDS
TTTCCCTTGATAGCTTAGCT+TGG 0.426076 tig0025315:-47408 None:intergenic
GATTGGATCAACAATAGTTA+TGG 0.427638 tig0025315:+43592 Msa1421870:CDS
TTTAGAGCGGAGGGAGAGGA+GGG 0.428100 tig0025315:-38824 None:intergenic
AGGAGGGAGTGAGGAAGTGG+AGG 0.430363 tig0025315:-38808 None:intergenic
CTATTCTTCACACTGGGGAT+TGG 0.430987 tig0025315:+41114 Msa1421870:CDS
ATCACACGGGACTCATTACC+AGG 0.431628 tig0025315:-43545 None:intergenic
GGAGTGAGGAAGTGGAGGGA+GGG 0.432143 tig0025315:-38803 None:intergenic
GTTTAGAGCGGAGGGAGAGG+AGG 0.436100 tig0025315:-38825 None:intergenic
GAATTACCACAAGATGTCTA+TGG 0.437596 tig0025315:+44735 Msa1421870:CDS
GAGAAAGAGACCACTACAAC+TGG 0.440855 tig0025315:+45815 Msa1421870:CDS
CATTTGAGATAGAACCAATC+AGG 0.444198 tig0025315:+41036 Msa1421870:CDS
CTGGACAATGCAAATCTTTG+TGG 0.444645 tig0025315:+46197 Msa1421870:CDS
ACATGCATATCGTGGAGAAT+TGG 0.445598 tig0025315:+43643 Msa1421870:CDS
GAATCACTTGGAAAATCAAC+TGG 0.447489 tig0025315:+44165 Msa1421870:CDS
TCTAATGGTTTCATTTCCCT+TGG 0.447711 tig0025315:+44368 Msa1421870:CDS
TATGGCAATGGCAATTACTT+CGG 0.451810 tig0025315:-44906 None:intergenic
TCATATCGGTGCGTTGCCTT+GGG 0.452996 tig0025315:+39639 Msa1421870:CDS
TTACGTGTTCTTCCTATTGG+TGG 0.453954 tig0025315:+39141 Msa1421870:CDS
GAGATAAACACAAAATTGTC+TGG 0.454789 tig0025315:+44956 Msa1421870:CDS
TTTATCTGATTCAGGGGAAT+CGG 0.455159 tig0025315:+45850 Msa1421870:CDS
GTGTTGTTGATAGCGGGAAA+TGG 0.456647 tig0025315:-38705 None:intergenic
AGTGATGGTGACAAAGCATT+TGG 0.457642 tig0025315:+44504 Msa1421870:CDS
CTGATTGGTTCTATCTCAAA+TGG 0.459887 tig0025315:-41035 None:intergenic
ATTTCACCCAAACCACCAAT+AGG 0.461698 tig0025315:-39153 None:intergenic
ATCAGACATTTCTTCAGACT+TGG 0.462282 tig0025315:-45999 None:intergenic
ATTGACGAGACACCACTTGA+TGG 0.463031 tig0025315:+41224 Msa1421870:CDS
GTTACAATAAGCAGATCCTT+AGG 0.463234 tig0025315:-43111 None:intergenic
TCAACTGATGATGCAATGAA+TGG 0.463811 tig0025315:-45887 None:intergenic
ACCAGAGTGGATGGGTCAAA+TGG 0.464328 tig0025315:-42247 None:intergenic
GATCTGCTTATTGTAACAAC+TGG 0.465028 tig0025315:+43117 Msa1421870:CDS
TCAACAAATGTGCTCTCACC+TGG 0.467892 tig0025315:+41912 Msa1421870:CDS
GATGGGATCAGCAGAAGTCC+TGG 0.469354 tig0025315:+46178 Msa1421870:CDS
CCTTGGTAAGTTTGAAAGCA+TGG 0.473674 tig0025315:-43290 None:intergenic
ATGAATCGCATATCAGAGAT+TGG 0.474239 tig0025315:+43575 Msa1421870:CDS
AGCATAGCATAGCATAGTTA+GGG 0.474737 tig0025315:+38744 Msa1421870:five_prime_UTR
CGATTTAACTGGGAGAAAGT+TGG 0.476469 tig0025315:+42061 Msa1421870:CDS
AATCAGCTTCTTGACTTCCT+CGG 0.476513 tig0025315:-46068 None:intergenic
CTCAGAGCTTGTTGGCTGAT+GGG 0.478275 tig0025315:+46161 Msa1421870:CDS
CACAAAGATTTGCATTGTCC+AGG 0.480128 tig0025315:-46196 None:intergenic
GCATTTATTACCAGAGTGGA+TGG 0.481486 tig0025315:-42256 None:intergenic
TCTCAGAGCTTGTTGGCTGA+TGG 0.481622 tig0025315:+46160 Msa1421870:CDS
ATAGAATGAGTCACCCTGAT+TGG 0.482517 tig0025315:-41050 None:intergenic
TTTCAGCAACAGGAGATTCA+AGG 0.483127 tig0025315:-41186 None:intergenic
TGAAAGAGTGTTGTTGATAG+CGG 0.483236 tig0025315:-38712 None:intergenic
TGAAGCTGAAACGGAGAGTC+TGG 0.484052 tig0025315:-38851 None:intergenic
TTGGAAAATCAACTGGCATT+CGG 0.486197 tig0025315:+44172 Msa1421870:CDS
TCATCAGGTCATCCCAGCAT+TGG 0.486824 tig0025315:+40610 Msa1421870:intron
ATACAAAACAATATCTTCCT+TGG 0.488079 tig0025315:-43307 None:intergenic
TCAAGAAGCTGATTGATTTG+CGG 0.490229 tig0025315:+46077 Msa1421870:CDS
CAATTCTCATTCTTTCATCA+AGG 0.490742 tig0025315:-44545 None:intergenic
GACAAAGCATTTGGTACATC+CGG 0.492657 tig0025315:+44513 Msa1421870:CDS
ACAAAGAACAAGTTTGTCGC+TGG 0.495185 tig0025315:+41011 Msa1421870:CDS
GAAAGAGTGTTGTTGATAGC+GGG 0.496926 tig0025315:-38711 None:intergenic
TTGGTTTAGAGCGGAGGGAG+AGG 0.497199 tig0025315:-38828 None:intergenic
GATGTCTATGGCTGGACAAA+GGG 0.497228 tig0025315:+44747 Msa1421870:CDS
AAGGCGATTTATCTGATTCA+GGG 0.497243 tig0025315:+45843 Msa1421870:CDS
CAAAAGTCCACTGGCTCACA+TGG 0.497633 tig0025315:+44826 Msa1421870:CDS
CATACAACATTGATAGTCAT+AGG 0.497973 tig0025315:+47595 Msa1421870:three_prime_UTR
CATTCTATTCCTGACTGTTG+TGG 0.499925 tig0025315:+41065 Msa1421870:CDS
AGGGAATAGGCAACATAAAA+GGG 0.501153 tig0025315:+47367 Msa1421870:three_prime_UTR
GTCTGGTTGGTTTAGAGCGG+AGG 0.502579 tig0025315:-38834 None:intergenic
TTAGAAGCAGCTTGGAAGGA+TGG 0.505273 tig0025315:+42217 Msa1421870:CDS
AGGCACATTTCAGCTTCAAA+AGG 0.507331 tig0025315:+41975 Msa1421870:CDS
CTAGAGTACCACACAAAAGA+AGG 0.508431 tig0025315:+39031 Msa1421870:CDS
GATTTAAAGTTGTGAAAGGA+AGG 0.508605 tig0025315:+46116 Msa1421870:CDS
GAAAGGAAGGATGGCTCTCT+GGG 0.509095 tig0025315:+46129 Msa1421870:CDS
TGAGAGTGTTGAAGCTGAAA+CGG 0.509651 tig0025315:-38860 None:intergenic
ACATTTCAGCTTCAAAAGGA+AGG 0.510397 tig0025315:+41979 Msa1421870:CDS
TTTACATGGTTCTGGTAACA+TGG 0.510579 tig0025315:+47306 Msa1421870:three_prime_UTR
AAAAGAAGGAGAAGAATTGA+AGG 0.511278 tig0025315:+39045 Msa1421870:CDS
CTGAAGGAGCATGAATCACT+TGG 0.511676 tig0025315:+44153 Msa1421870:CDS
GGAGGGAGTGAGGAAGTGGA+GGG 0.514224 tig0025315:-38807 None:intergenic
AACACCGGCAACAAATTGAA+TGG 0.517785 tig0025315:+47172 Msa1421870:exon
AACAAGTATTCTCCATGTAC+AGG 0.517823 tig0025315:-44129 None:intergenic
AACTATGCTATGCTATGCTA+TGG 0.519733 tig0025315:-38740 None:intergenic
TGGCTGGAAACACCTTAAAA+GGG 0.519920 tig0025315:+44705 Msa1421870:CDS
AATGCACGAGTAGGAAATGA+TGG 0.520317 tig0025315:+39000 Msa1421870:intron
AGAGATATCTCAGAGCTTGT+TGG 0.522256 tig0025315:+46153 Msa1421870:CDS
TACCAGAACCATGTAAATGA+TGG 0.525460 tig0025315:-47300 None:intergenic
TGCATCTTCCTTTACAATGG+AGG 0.526281 tig0025315:+40652 Msa1421870:CDS
CTAATCAGGAGATCAAGAAC+GGG 0.527630 tig0025315:+47087 Msa1421870:intron
TATTGATGCTTATGCACCTA+AGG 0.528326 tig0025315:+43095 Msa1421870:CDS
GACAGATTTAAAGTTGTGAA+AGG 0.528331 tig0025315:+46112 Msa1421870:CDS
GCTTCAACACTCTCAGCCTC+AGG 0.528459 tig0025315:+38868 Msa1421870:CDS
GCCATTGCCATAGAAAATCC+TGG 0.528917 tig0025315:+44917 Msa1421870:CDS
CAAGTCTGAGCTAGGTGACC+AGG 0.529734 tig0025315:+47269 Msa1421870:three_prime_UTR
GCATCAAATCTACATCGGAT+TGG 0.529989 tig0025315:+42020 Msa1421870:CDS
TTCATCAAGGAAGAGTTCAC+CGG 0.530019 tig0025315:-44532 None:intergenic
TGAGGAAGTACAGTGGTAAA+CGG 0.530774 tig0025315:+44882 Msa1421870:CDS
TCAATTTGTCAGGTTATCCC+TGG 0.531224 tig0025315:+43527 Msa1421870:intron
GGACATACTTAGAAGCAGCT+TGG 0.532316 tig0025315:+42209 Msa1421870:CDS
TTGACGAGACACCACTTGAT+GGG 0.533040 tig0025315:+41225 Msa1421870:CDS
TAAATGATGGATTATCATCC+TGG 0.533252 tig0025315:-47287 None:intergenic
AGAACTAGTCCACAACAGTC+AGG 0.535143 tig0025315:-41074 None:intergenic
AGCAAATCAAGCTATCATCA+AGG 0.535154 tig0025315:-47638 None:intergenic
TACCACAAGATGTCTATGGC+TGG 0.535188 tig0025315:+44739 Msa1421870:CDS
TATCAAGGGAAAGAATATAT+GGG 0.535704 tig0025315:+47419 Msa1421870:three_prime_UTR
TCTTCACACTGGGGATTGGA+AGG 0.536502 tig0025315:+41118 Msa1421870:CDS
ATGATAATCCATCATTTACA+TGG 0.537258 tig0025315:+47292 Msa1421870:three_prime_UTR
CATGGTCATGAAGATCATAT+CGG 0.538341 tig0025315:+39625 Msa1421870:CDS
GGTGTATTGGAATCCAATGC+TGG 0.538955 tig0025315:-40623 None:intergenic
ATAGGCAACATAAAAGGGAT+TGG 0.539083 tig0025315:+47372 Msa1421870:three_prime_UTR
GCCGAATACCTCCATTGTAA+AGG 0.539763 tig0025315:-40660 None:intergenic
TAAAGTTGTGAAAGGAAGGA+TGG 0.540086 tig0025315:+46120 Msa1421870:CDS
ATCTGCCACAACAGATTCAC+TGG 0.540628 tig0025315:-41943 None:intergenic
TTGTGGCAGATTCATTATTG+AGG 0.541904 tig0025315:+41955 Msa1421870:CDS
AGATTCTGTTCAACGTAGGA+TGG 0.542555 tig0025315:+39086 Msa1421870:CDS
ATTAAGAATGGAGAGATGCT+TGG 0.543149 tig0025315:+44314 Msa1421870:CDS
ATACTTAGAAGCAGCTTGGA+AGG 0.544162 tig0025315:+42213 Msa1421870:CDS
TTAGAGGAACTCTCTAAAGA+AGG 0.550937 tig0025315:+41269 Msa1421870:CDS
CAAAGAACAAGTTTGTCGCT+GGG 0.552337 tig0025315:+41012 Msa1421870:CDS
CATTTCAGCTTCAAAAGGAA+GGG 0.552543 tig0025315:+41980 Msa1421870:CDS
TCTGGTTGGTTTAGAGCGGA+GGG 0.552825 tig0025315:-38833 None:intergenic
CTGTCCCGTCAAAAGTCCAC+TGG 0.559295 tig0025315:+44817 Msa1421870:CDS
GTCGGAGATGTTGAGGAAGA+TGG 0.562067 tig0025315:+44859 Msa1421870:CDS
TCACAACTTTAAATCTGTCA+CGG 0.562346 tig0025315:-46108 None:intergenic
TCCATTTGACCCATCCACTC+TGG 0.567034 tig0025315:+42246 Msa1421870:CDS
AGATGTTGAGGAAGATGGTG+AGG 0.567241 tig0025315:+44864 Msa1421870:CDS
TTGGCAATATCTTGAGGACA+TGG 0.567651 tig0025315:+47127 Msa1421870:CDS
GAACTGTGTCGGAGATGTTG+AGG 0.569522 tig0025315:+44852 Msa1421870:CDS
GCAAATCAAGCTATCATCAA+GGG 0.570671 tig0025315:-47637 None:intergenic
ATGGAACTATTCTTCACACT+GGG 0.571280 tig0025315:+41108 Msa1421870:CDS
GTTCTGGTAACATGGACCAT+TGG 0.571450 tig0025315:+47314 Msa1421870:three_prime_UTR
CAAAGCATTTATTACCAGAG+TGG 0.572230 tig0025315:-42260 None:intergenic
GTCCAGCCATAGACATCTTG+TGG 0.573025 tig0025315:-44741 None:intergenic
ACCACTACAACTGGAGCTGA+AGG 0.573383 tig0025315:+45824 Msa1421870:CDS
CTCTAAAGAAGGAGTAACAT+TGG 0.574233 tig0025315:+41280 Msa1421870:CDS
TTCACACTTGAGAAATAGAA+GGG 0.575027 tig0025315:+44340 Msa1421870:CDS
AATGACCACAAGTCTGAGCT+AGG 0.576602 tig0025315:+47261 Msa1421870:three_prime_UTR
TCTAATCAGGAGATCAAGAA+CGG 0.576894 tig0025315:+47086 Msa1421870:intron
GCTGAAACGGAGAGTCTGGT+TGG 0.581128 tig0025315:-38847 None:intergenic
GGTCACCTAGCTCAGACTTG+TGG 0.581524 tig0025315:-47266 None:intergenic
AGATGTCTATGGCTGGACAA+AGG 0.582028 tig0025315:+44746 Msa1421870:CDS
CAATGGTTATGTTTCACGAA+AGG 0.585188 tig0025315:+45928 Msa1421870:CDS
AACCCAAGCTAAGCTATCAA+GGG 0.588882 tig0025315:+47405 Msa1421870:three_prime_UTR
GCCTTCAGCTCCAGTTGTAG+TGG 0.589034 tig0025315:-45825 None:intergenic
GTTCTTTCCATGTGAGCCAG+TGG 0.589970 tig0025315:-44833 None:intergenic
AAGCTGCTGCCGATTTAACT+GGG 0.591068 tig0025315:+42051 Msa1421870:CDS
TGGTAATGAGTCCCGTGTGA+TGG 0.593761 tig0025315:+43547 Msa1421870:CDS
GGAGATTCAAGGTAAATGAA+AGG 0.599263 tig0025315:-41175 None:intergenic
CCAATAGGAAGAACACGTAA+TGG 0.600542 tig0025315:-39138 None:intergenic
AGCAGCTTGGAAGGATGGAA+AGG 0.602363 tig0025315:+42222 Msa1421870:CDS
TCCAGCACACTGCAAACAAG+AGG 0.605628 tig0025315:+45049 Msa1421870:CDS
TCACATGGAAAGAACTGTGT+CGG 0.607611 tig0025315:+44841 Msa1421870:CDS
CCATGCTTTCAAACTTACCA+AGG 0.609185 tig0025315:+43290 Msa1421870:CDS
GACAACCAGTGAATCTGTTG+TGG 0.610763 tig0025315:+41938 Msa1421870:CDS
ATCAACATTTAGAAGATCCG+TGG 0.610955 tig0025315:+45003 Msa1421870:CDS
TTATGGATATTAAATGCCAA+TGG 0.611259 tig0025315:-47330 None:intergenic
CAAATTGAATGGAAATGTGG+TGG 0.613223 tig0025315:+47183 Msa1421870:exon
GATGATGGCATTGACACAGA+AGG 0.613399 tig0025315:+45782 Msa1421870:intron
CATTTATTACCAGAGTGGAT+GGG 0.613796 tig0025315:-42255 None:intergenic
CAAATGTGCTCTCACCTGGA+AGG 0.615112 tig0025315:+41916 Msa1421870:CDS
GATGGAACTATTCTTCACAC+TGG 0.616053 tig0025315:+41107 Msa1421870:CDS
AATATCTTGAGGACATGGAA+AGG 0.619122 tig0025315:+47132 Msa1421870:CDS
ATTGTCTAGCGATGAAACAC+CGG 0.620875 tig0025315:+47157 Msa1421870:CDS
TGGAGAATACTTGTTCCTGA+AGG 0.627983 tig0025315:+44137 Msa1421870:CDS
AGAGTCTGGTTGGTTTAGAG+CGG 0.631106 tig0025315:-38837 None:intergenic
ATGTAGATTTGATGCAAACT+GGG 0.634137 tig0025315:-42012 None:intergenic
AAAGAATATATGGGTTTAGG+GGG 0.634949 tig0025315:+47428 Msa1421870:three_prime_UTR
TGTAAATGTCTTCTGCGTTG+TGG 0.634999 tig0025315:+47569 Msa1421870:three_prime_UTR
GATTCATCATTTCCATCACA+CGG 0.639799 tig0025315:-43559 None:intergenic
AAATGTCTTCTGCGTTGTGG+TGG 0.643205 tig0025315:+47572 Msa1421870:three_prime_UTR
ATTTGAGATAGAACCAATCA+GGG 0.643383 tig0025315:+41037 Msa1421870:CDS
ATTCATCATTTCCATCACAC+GGG 0.645095 tig0025315:-43558 None:intergenic
CAACAAATTGAATGGAAATG+TGG 0.646093 tig0025315:+47180 Msa1421870:exon
AAATTGAATGGAAATGTGGT+GGG 0.649266 tig0025315:+47184 Msa1421870:exon
GAAAGAATATATGGGTTTAG+GGG 0.650131 tig0025315:+47427 Msa1421870:three_prime_UTR
AGGCGATTTATCTGATTCAG+GGG 0.651319 tig0025315:+45844 Msa1421870:CDS
GTGTATTGGAATCCAATGCT+GGG 0.657667 tig0025315:-40622 None:intergenic
AAATCAATCAAAGCAAACAA+TGG 0.658404 tig0025315:+45911 Msa1421870:CDS
TTGGATCAACAATAGTTATG+GGG 0.659409 tig0025315:+43594 Msa1421870:CDS
ACATCTGGACATGCATATCG+TGG 0.659861 tig0025315:+43635 Msa1421870:CDS
AGTTTGCATCAAATCTACAT+CGG 0.660918 tig0025315:+42015 Msa1421870:CDS
TGGAAGATTCTGTTCAACGT+AGG 0.664297 tig0025315:+39082 Msa1421870:CDS
TTGATATTCCAGGACCAACG+TGG 0.664721 tig0025315:-44985 None:intergenic
AAGATGGTGAGGAAGTACAG+TGG 0.672062 tig0025315:+44875 Msa1421870:CDS
GAAGCACTTGTTATAACACA+TGG 0.674931 tig0025315:+39607 Msa1421870:CDS
ATGCAGTTGAAATATAGTGA+TGG 0.680617 tig0025315:+44489 Msa1421870:intron
GCAAGATTTAAGGCAGCACG+TGG 0.681321 tig0025315:-43252 None:intergenic
TGTACAGGAAGAAAATGTTG+CGG 0.705564 tig0025315:-44114 None:intergenic
TGATATTCCAGGACCAACGT+GGG 0.714591 tig0025315:-44984 None:intergenic
TTGTCTGGCAAATCCCACGT+TGG 0.720381 tig0025315:+44971 Msa1421870:CDS
CAACTTTAAATCTGTCACGG+AGG 0.723247 tig0025315:-46105 None:intergenic
ATAGGAAGAACACGTAATGG+CGG 0.726743 tig0025315:-39135 None:intergenic
TCACACGGGACTCATTACCA+GGG 0.727328 tig0025315:-43544 None:intergenic
TGGAACTATTCTTCACACTG+GGG 0.745314 tig0025315:+41109 Msa1421870:CDS
ATATACATAGAACACTAACG+CGG 0.785355 tig0025315:+47690 Msa1421870:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAAATATTTTCAATTG+TGG + tig0025315:41451-41470 Msa1421870:intron 10.0%
!! ATTTGTATAATTATTATATC+AGG + tig0025315:42165-42184 Msa1421870:intron 10.0%
!! ATTATAAATAGTATTATTCT+TGG + tig0025315:42771-42790 Msa1421870:intron 10.0%
!! TTATAAATATAAATCACAAA+TGG - tig0025315:42968-42987 None:intergenic 10.0%
!!! AATTTTATTAATTTTGTTAG+TGG + tig0025315:47524-47543 Msa1421870:three_prime_UTR 10.0%
!!! TTTCTTTTTTCTTACTAAAA+TGG + tig0025315:38768-38787 Msa1421870:exon 15.0%
!! TAACTTATAGAAAACTATTA+AGG - tig0025315:39260-39279 None:intergenic 15.0%
!! ACTTAAACAAATAAAAGTAA+AGG - tig0025315:39481-39500 None:intergenic 15.0%
!! ATACAACATTTATAAGAAAA+TGG + tig0025315:39572-39591 Msa1421870:CDS 15.0%
!! ACAATTGTTTCATATATAAT+TGG - tig0025315:40261-40280 None:intergenic 15.0%
!! AATTATATATGAAACAATTG+TGG + tig0025315:40260-40279 Msa1421870:intron 15.0%
!! ATTATATATGAAACAATTGT+GGG + tig0025315:40261-40280 Msa1421870:intron 15.0%
!! TCTATTATAGTAAAATTGTA+AGG - tig0025315:40526-40545 None:intergenic 15.0%
!!! TTTTTTTTCTAACAATACAA+GGG - tig0025315:41673-41692 None:intergenic 15.0%
!!! ATTTTTTTTCTAACAATACA+AGG - tig0025315:41674-41693 None:intergenic 15.0%
!!! TTGATTTATTAATTTGTTGT+TGG + tig0025315:42501-42520 Msa1421870:intron 15.0%
!! TACTATTTATAATCAAAACA+TGG - tig0025315:42764-42783 None:intergenic 15.0%
!! TAAATATAATAAAGCTGAAT+AGG - tig0025315:42999-43018 None:intergenic 15.0%
!! TTTGTGGATAAAAAAATATA+AGG - tig0025315:43471-43490 None:intergenic 15.0%
!! TAAAAAAAATTGAATAGACA+AGG - tig0025315:43745-43764 None:intergenic 15.0%
!!! TTATTAGATACTTTCTAAAA+GGG - tig0025315:44438-44457 None:intergenic 15.0%
!!! AAAAATATTTGGTGTAAATA+AGG - tig0025315:45697-45716 None:intergenic 15.0%
!!! TTATTTACACCAAATATTTT+TGG + tig0025315:45696-45715 Msa1421870:intron 15.0%
!! AAAATTACACCAAAAATATT+TGG - tig0025315:45708-45727 None:intergenic 15.0%
!!! TTATTTTTCTTTACTGATTT+TGG - tig0025315:46040-46059 None:intergenic 15.0%
!! AATCAGTAAAGAAAAATAAA+TGG + tig0025315:46041-46060 Msa1421870:CDS 15.0%
!!! AAATACTTTCTTTTTTTAAG+AGG + tig0025315:46608-46627 Msa1421870:intron 15.0%
!!! TTAATATCCATAATTCTTTT+AGG + tig0025315:47340-47359 Msa1421870:three_prime_UTR 15.0%
!!! TAATATCCATAATTCTTTTA+GGG + tig0025315:47341-47360 Msa1421870:three_prime_UTR 15.0%
!! ACAAAAGAAACAAAAATATT+GGG - tig0025315:47482-47501 None:intergenic 15.0%
!!! ATGTAATGGAAATATCTAAT+TGG + tig0025315:38965-38984 Msa1421870:intron 20.0%
!!! AATTTTTGTATGTATGCATT+TGG + tig0025315:39501-39520 Msa1421870:CDS 20.0%
!! TTTCTTATAAATGTTGTATC+AGG - tig0025315:39571-39590 None:intergenic 20.0%
!!! TTACTGTTTTCATAATGAAA+AGG + tig0025315:39857-39876 Msa1421870:intron 20.0%
!! TGTAGAATTAAGTTATTTGA+TGG - tig0025315:39923-39942 None:intergenic 20.0%
!! AAATAACTTAATTCTACAGT+TGG + tig0025315:39925-39944 Msa1421870:intron 20.0%
!! AAATATAAACATACAGCAAA+AGG - tig0025315:40045-40064 None:intergenic 20.0%
!! ATCTAAATCTAGAAAGATAT+AGG - tig0025315:40361-40380 None:intergenic 20.0%
!! TAAAGTTACATAAGACATTA+AGG - tig0025315:40420-40439 None:intergenic 20.0%
!!! TTTGTCCTTTATTTATATGT+TGG + tig0025315:40564-40583 Msa1421870:intron 20.0%
!! AAGAACCAACATATAAATAA+AGG - tig0025315:40572-40591 None:intergenic 20.0%
!!! ATAAATGCTAGTTTTTGAAT+CGG + tig0025315:40699-40718 Msa1421870:intron 20.0%
!! TAAATATGTAATCTCTACTT+TGG + tig0025315:41623-41642 Msa1421870:intron 20.0%
!!! TTTTTTTCTAACAATACAAG+GGG - tig0025315:41672-41691 None:intergenic 20.0%
!!! TTAGCATTTAAGATAAACAA+GGG - tig0025315:41844-41863 None:intergenic 20.0%
!!! ATTAGCATTTAAGATAAACA+AGG - tig0025315:41845-41864 None:intergenic 20.0%
!! TTATTATATCAGGTATTTGT+TGG + tig0025315:42175-42194 Msa1421870:intron 20.0%
!!! ATTTATTAATTTGTTGTTGG+AGG + tig0025315:42504-42523 Msa1421870:intron 20.0%
!! TTGAATGAAATAATAAAGAG+AGG - tig0025315:42698-42717 None:intergenic 20.0%
!!! TATTGTCTCTAATTTTACAT+AGG + tig0025315:43059-43078 Msa1421870:intron 20.0%
!! TGTTCATATTTCATGAAATT+AGG - tig0025315:43181-43200 None:intergenic 20.0%
!! ATTTCATGAAATATGAACAT+TGG + tig0025315:43182-43201 Msa1421870:intron 20.0%
!! TTTATCTTGAAGCTTAATAT+GGG + tig0025315:43376-43395 Msa1421870:intron 20.0%
!!! AAAAAATACAAACTAGTTTG+TGG - tig0025315:43487-43506 None:intergenic 20.0%
!!! TGATTTAAAATCAATTTGTC+AGG + tig0025315:43517-43536 Msa1421870:intron 20.0%
!!! AATAACATCTATATTTTTGC+AGG + tig0025315:44068-44087 Msa1421870:intron 20.0%
!!! TATTAGATACTTTCTAAAAG+GGG - tig0025315:44437-44456 None:intergenic 20.0%
!! CTTATTAGATACTTTCTAAA+AGG - tig0025315:44439-44458 None:intergenic 20.0%
!!! AATAAGCTATGTGATTTTTT+TGG + tig0025315:44453-44472 Msa1421870:intron 20.0%
!!! ATAAGCTATGTGATTTTTTT+GGG + tig0025315:44454-44473 Msa1421870:intron 20.0%
!! TGCTGTAAAAGATAAATATT+AGG - tig0025315:44652-44671 None:intergenic 20.0%
!!! AATATTTATCTTTTACAGCA+TGG + tig0025315:44652-44671 Msa1421870:intron 20.0%
!!! CCAAACTTTCTAAATTTTTA+GGG - tig0025315:44688-44707 None:intergenic 20.0%
!! TATTTATACAGGTAAGAAAA+TGG - tig0025315:45205-45224 None:intergenic 20.0%
!! TACTATGATTATGATAAGAT+AGG - tig0025315:45297-45316 None:intergenic 20.0%
!! CATAGTAATCAAAACTTATT+TGG - tig0025315:45548-45567 None:intergenic 20.0%
!! TTATTATTTAAGTGATAGCA+TGG - tig0025315:46291-46310 None:intergenic 20.0%
!! AATAATAATTCTAAGCATAC+TGG + tig0025315:46303-46322 Msa1421870:intron 20.0%
!!! ATTTTAATGTAGAGAAAGTT+AGG + tig0025315:46905-46924 Msa1421870:intron 20.0%
!! ATCTCAGTATTATCTATAAT+AGG + tig0025315:46969-46988 Msa1421870:intron 20.0%
!! ATAAGTTATTGTTGAAATAG+TGG - tig0025315:47059-47078 None:intergenic 20.0%
!!! ACTTATTTTGTATTCTAATC+AGG + tig0025315:47073-47092 Msa1421870:intron 20.0%
!! CAAAAGAAACAAAAATATTG+GGG - tig0025315:47481-47500 None:intergenic 20.0%
!! GACAAAAGAAACAAAAATAT+TGG - tig0025315:47483-47502 None:intergenic 20.0%
!!! TAGTGTTCTATGTATATTTT+TGG - tig0025315:47687-47706 None:intergenic 20.0%
!! CAATTTTATGAAGGAAATGA+TGG + tig0025315:39111-39130 Msa1421870:CDS 25.0%
! TATGTTTATATTTCCTTGGT+TGG + tig0025315:40052-40071 Msa1421870:intron 25.0%
! ATGTTTATATTTCCTTGGTT+GGG + tig0025315:40053-40072 Msa1421870:intron 25.0%
! ATTTCAAATCAGAAAGAGAA+AGG - tig0025315:40135-40154 None:intergenic 25.0%
!! CTTTCTGATTTGAAATTTAG+AGG + tig0025315:40139-40158 Msa1421870:intron 25.0%
! AATTTAGAGGTTTCAATGTT+TGG + tig0025315:40152-40171 Msa1421870:intron 25.0%
!!! TTTCAATGTTTGGTGTTTTA+TGG + tig0025315:40162-40181 Msa1421870:intron 25.0%
!!! TTCAATGTTTGGTGTTTTAT+GGG + tig0025315:40163-40182 Msa1421870:intron 25.0%
!!! TGAAGTTTGTGTTGTTATTT+TGG + tig0025315:40311-40330 Msa1421870:intron 25.0%
!!! GAAGTTTGTGTTGTTATTTT+GGG + tig0025315:40312-40331 Msa1421870:intron 25.0%
!!! AAGTTTGTGTTGTTATTTTG+GGG + tig0025315:40313-40332 Msa1421870:intron 25.0%
! TAAATCTAGAAAGATATAGG+AGG - tig0025315:40358-40377 None:intergenic 25.0%
! TCTAGATTTAGATTTCAAAG+AGG + tig0025315:40368-40387 Msa1421870:intron 25.0%
! GCTTATAAAAAAACGTTTGA+AGG + tig0025315:40947-40966 Msa1421870:intron 25.0%
!!! ATATTTTGAGTCTAGATGTA+AGG - tig0025315:40986-41005 None:intergenic 25.0%
!! ATATATCTTTAGCTTATCGT+TGG + tig0025315:41344-41363 Msa1421870:intron 25.0%
!! TATATCTTTAGCTTATCGTT+GGG + tig0025315:41345-41364 Msa1421870:intron 25.0%
!!! CAATGAAATTTTGAAGTAGT+GGG - tig0025315:41574-41593 None:intergenic 25.0%
!! ATTTAAGATAAACAAGGGAA+AGG - tig0025315:41839-41858 None:intergenic 25.0%
!! TTCTTTTCTGCAATTGATAA+TGG + tig0025315:42105-42124 Msa1421870:intron 25.0%
! GGGGTAGAAATTTAAAAATT+AGG - tig0025315:42334-42353 None:intergenic 25.0%
!!! TTTCCGATGTATTTTAACTT+CGG + tig0025315:42562-42581 Msa1421870:intron 25.0%
! CTGAAGTAATATGTCAAAAA+GGG - tig0025315:42591-42610 None:intergenic 25.0%
! ACTGAAGTAATATGTCAAAA+AGG - tig0025315:42592-42611 None:intergenic 25.0%
! AAGATGTAAAGACTGAAATA+TGG - tig0025315:42822-42841 None:intergenic 25.0%
! TATTTCAGTCTTTACATCTT+TGG + tig0025315:42822-42841 Msa1421870:intron 25.0%
!! TGAAATTAGGCAGTATTTTA+AGG - tig0025315:43168-43187 None:intergenic 25.0%
! AATATGAACATTGGAATACA+AGG + tig0025315:43191-43210 Msa1421870:intron 25.0%
! ATACAAAACAATATCTTCCT+TGG - tig0025315:43310-43329 None:intergenic 25.0%
!!! TATTGTTTTGTATTCAGCTA+AGG + tig0025315:43317-43336 Msa1421870:CDS 25.0%
! CTTTATCTTGAAGCTTAATA+TGG + tig0025315:43375-43394 Msa1421870:intron 25.0%
! ATTGGATCAACAATAGTTAT+GGG + tig0025315:43593-43612 Msa1421870:CDS 25.0%
! ATATCGATACGTAAACTAAA+AGG - tig0025315:43707-43726 None:intergenic 25.0%
! GCAGAGTTGTAATAATAATT+TGG - tig0025315:43784-43803 None:intergenic 25.0%
! AAAACAATTTCGAAAGAAAC+TGG + tig0025315:43820-43839 Msa1421870:intron 25.0%
!! TTTTTCTTACCCAAATACTA+AGG - tig0025315:43891-43910 None:intergenic 25.0%
!! CTGTAAATTTTCTTTTCCAA+GGG - tig0025315:44387-44406 None:intergenic 25.0%
! AAAGAAAATTTACAGGTTAG+TGG + tig0025315:44392-44411 Msa1421870:intron 25.0%
! CCCTAAAAATTTAGAAAGTT+TGG + tig0025315:44685-44704 Msa1421870:CDS 25.0%
!! GCCAAACTTTCTAAATTTTT+AGG - tig0025315:44689-44708 None:intergenic 25.0%
! AAAAATTTAGAAAGTTTGGC+TGG + tig0025315:44689-44708 Msa1421870:CDS 25.0%
!! AATTCTTATCTTCCCTTTTA+AGG - tig0025315:44720-44739 None:intergenic 25.0%
!!! CTATTTTTTGTGAAACTCAA+AGG + tig0025315:45432-45451 Msa1421870:intron 25.0%
! TGCACTAATTAATAGAACAT+GGG - tig0025315:45762-45781 None:intergenic 25.0%
! AAATCAATCAAAGCAAACAA+TGG + tig0025315:45911-45930 Msa1421870:CDS 25.0%
! GGTAAAACCATAAAAAATGA+TGG + tig0025315:46361-46380 Msa1421870:intron 25.0%
!! AAACCATAAAAAATGATGGA+TGG + tig0025315:46365-46384 Msa1421870:intron 25.0%
!!! AACCATAAAAAATGATGGAT+GGG + tig0025315:46366-46385 Msa1421870:intron 25.0%
! AAATCGGTGTACATTATTAT+GGG - tig0025315:46562-46581 None:intergenic 25.0%
! TAAATCGGTGTACATTATTA+TGG - tig0025315:46563-46582 None:intergenic 25.0%
! TCTTTGTAGTAAAACAAAGT+GGG - tig0025315:46834-46853 None:intergenic 25.0%
! TTCTTTGTAGTAAAACAAAG+TGG - tig0025315:46835-46854 None:intergenic 25.0%
! AGATAATACTGAGATATACA+TGG - tig0025315:46964-46983 None:intergenic 25.0%
! TCAGTATTATCTATAATAGG+AGG + tig0025315:46972-46991 Msa1421870:intron 25.0%
! CAGTATTATCTATAATAGGA+GGG + tig0025315:46973-46992 Msa1421870:intron 25.0%
! AAAAAATTGGCAATATCTTG+AGG + tig0025315:47121-47140 Msa1421870:CDS 25.0%
!!! TATTTTGGTGAGCTATATTT+TGG + tig0025315:47219-47238 Msa1421870:three_prime_UTR 25.0%
! ATGATAATCCATCATTTACA+TGG + tig0025315:47292-47311 Msa1421870:three_prime_UTR 25.0%
! TTATGGATATTAAATGCCAA+TGG - tig0025315:47333-47352 None:intergenic 25.0%
! TATCAAGGGAAAGAATATAT+GGG + tig0025315:47419-47438 Msa1421870:three_prime_UTR 25.0%
! AGAAGACATTTACACATTTA+TGG - tig0025315:47563-47582 None:intergenic 25.0%
! ATTTTGTTCATTCAGTGGAT+TGG - tig0025315:38682-38701 None:intergenic 30.0%
ACTATGCTGTTATCATGTAA+TGG + tig0025315:38951-38970 Msa1421870:intron 30.0%
!!! TTATTTTTGAATGCACGAGT+AGG + tig0025315:38991-39010 Msa1421870:intron 30.0%
AAAAGAAGGAGAAGAATTGA+AGG + tig0025315:39045-39064 Msa1421870:CDS 30.0%
!!! GAATCTTCCATACTTTTTCT+TGG - tig0025315:39072-39091 None:intergenic 30.0%
GAATGAATTGTATGCTTGTT+GGG + tig0025315:39178-39197 Msa1421870:intron 30.0%
AAAAGCTGAAAACAACTTAC+TGG + tig0025315:39322-39341 Msa1421870:intron 30.0%
ACAATTTGACAATGACTTTG+AGG - tig0025315:39441-39460 None:intergenic 30.0%
! GTATAATCTTTTGTACTCCA+AGG - tig0025315:39549-39568 None:intergenic 30.0%
! TAACAAGTGCTTCAATTTTG+TGG - tig0025315:39600-39619 None:intergenic 30.0%
!!! AAAAAGCACTCTTTTGTTCA+TGG + tig0025315:39811-39830 Msa1421870:intron 30.0%
TAACTTAATTCTACAGTTGG+TGG + tig0025315:39928-39947 Msa1421870:intron 30.0%
GCTGTATGTTTATATTTCCT+TGG + tig0025315:40048-40067 Msa1421870:intron 30.0%
TTAGATGGAATCTTAACCTT+TGG - tig0025315:40195-40214 None:intergenic 30.0%
ACAAAAGTCTCTAACTTAGA+TGG - tig0025315:40210-40229 None:intergenic 30.0%
!! AGAGACTTTTGTTTGAAATG+TGG + tig0025315:40218-40237 Msa1421870:intron 30.0%
! AAGGAAAATGAAGTGTTAGA+AGG - tig0025315:40507-40526 None:intergenic 30.0%
GTTCTTAACATTACTTATCC+TGG + tig0025315:40586-40605 Msa1421870:intron 30.0%
AGATGCAAAAATTGGTGTAT+TGG - tig0025315:40639-40658 None:intergenic 30.0%
GTAAAGGAAGATGCAAAAAT+TGG - tig0025315:40647-40666 None:intergenic 30.0%
! TTTTGCATCTTCCTTTACAA+TGG + tig0025315:40649-40668 Msa1421870:CDS 30.0%
AGAATAGATGTCTATTACAG+TGG - tig0025315:40827-40846 None:intergenic 30.0%
! ATTTGAGATAGAACCAATCA+GGG + tig0025315:41037-41056 Msa1421870:CDS 30.0%
! TTGATGGGAAAGTTTTTGAT+CGG + tig0025315:41240-41259 Msa1421870:CDS 30.0%
!!! GCAATGAAATTTTGAAGTAG+TGG - tig0025315:41575-41594 None:intergenic 30.0%
ATTATAAACAAGTGAGCATC+TGG - tig0025315:41760-41779 None:intergenic 30.0%
ATGTAGATTTGATGCAAACT+GGG - tig0025315:42015-42034 None:intergenic 30.0%
AGTTTGCATCAAATCTACAT+CGG + tig0025315:42015-42034 Msa1421870:CDS 30.0%
AGAAAAGAATACTAGCTAGT+GGG - tig0025315:42094-42113 None:intergenic 30.0%
! TATTTGTTGGCATGTCTTTA+AGG + tig0025315:42188-42207 Msa1421870:CDS 30.0%
!!! GATCTGCTTTTTCATTTACT+AGG + tig0025315:42399-42418 Msa1421870:intron 30.0%
AATACATCGGAAAATTCATG+TGG - tig0025315:42555-42574 None:intergenic 30.0%
!!! TTCCGATGTATTTTAACTTC+GGG + tig0025315:42563-42582 Msa1421870:intron 30.0%
TGACAGCATACTGTATTTAA+AGG - tig0025315:42653-42672 None:intergenic 30.0%
TGTCATTATCTGTGACTAAT+TGG + tig0025315:42668-42687 Msa1421870:intron 30.0%
ATGAAATAATAAAGAGAGGC+AGG - tig0025315:42694-42713 None:intergenic 30.0%
ATTAGAGACAATAAGATGCA+AGG - tig0025315:43052-43071 None:intergenic 30.0%
! AATATATGTGCTTTTGTGTC+AGG + tig0025315:43224-43243 Msa1421870:intron 30.0%
TCCAAAAGATGCAAGATTTA+AGG - tig0025315:43265-43284 None:intergenic 30.0%
! TTTTGTATTCAGCTAAGGTA+TGG + tig0025315:43322-43341 Msa1421870:intron 30.0%
GCAGGTTGTAATTTCATAAT+AGG - tig0025315:43418-43437 None:intergenic 30.0%
!! AATATAAGGTGTTGCTAGAA+AGG - tig0025315:43457-43476 None:intergenic 30.0%
GATTGGATCAACAATAGTTA+TGG + tig0025315:43592-43611 Msa1421870:CDS 30.0%
TTGGATCAACAATAGTTATG+GGG + tig0025315:43594-43613 Msa1421870:CDS 30.0%
AATGAAAACTTACACACATC+TGG + tig0025315:43620-43639 Msa1421870:CDS 30.0%
TTATTACAACTCTGCTAACA+AGG + tig0025315:43789-43808 Msa1421870:intron 30.0%
GTATTTGGGTAAGAAAAATG+AGG + tig0025315:43893-43912 Msa1421870:intron 30.0%
CATGAATGATTGTACTGAAA+AGG - tig0025315:43990-44009 None:intergenic 30.0%
!! AACATCTATATTTTTGCAGG+AGG + tig0025315:44071-44090 Msa1421870:intron 30.0%
TTTCACACTTGAGAAATAGA+AGG + tig0025315:44339-44358 Msa1421870:CDS 30.0%
TTCACACTTGAGAAATAGAA+GGG + tig0025315:44340-44359 Msa1421870:CDS 30.0%
AATAGAAGGGTTCTTTCTAA+TGG + tig0025315:44353-44372 Msa1421870:CDS 30.0%
! CCTGTAAATTTTCTTTTCCA+AGG - tig0025315:44388-44407 None:intergenic 30.0%
CCTTGGAAAAGAAAATTTAC+AGG + tig0025315:44385-44404 Msa1421870:CDS 30.0%
TATTTCAACTGCATGAGAAA+AGG - tig0025315:44483-44502 None:intergenic 30.0%
ATGCAGTTGAAATATAGTGA+TGG + tig0025315:44489-44508 Msa1421870:intron 30.0%
CAATTCTCATTCTTTCATCA+AGG - tig0025315:44548-44567 None:intergenic 30.0%
AGAATGAGAATTGCATTAGA+TGG + tig0025315:44555-44574 Msa1421870:CDS 30.0%
GAGATAAACACAAAATTGTC+TGG + tig0025315:44956-44975 Msa1421870:CDS 30.0%
CTTCTAAATGTTGATATTCC+AGG - tig0025315:44998-45017 None:intergenic 30.0%
! TTCCTTTTTATGTTCATCCA+CGG - tig0025315:45023-45042 None:intergenic 30.0%
!!! GTCAGTTTTGCTATTTATAC+AGG - tig0025315:45216-45235 None:intergenic 30.0%
! TGCTTTTACCATGGATATAT+GGG - tig0025315:45246-45265 None:intergenic 30.0%
TAGTAGAATGCTACTGTTAT+TGG + tig0025315:45376-45395 Msa1421870:intron 30.0%
AGTGAAAACCATAGTTAGAT+CGG - tig0025315:45476-45495 None:intergenic 30.0%
TTATCTTCACAAAACAATGC+TGG + tig0025315:45503-45522 Msa1421870:intron 30.0%
TTACTAAATAGACTGTAGTC+AGG - tig0025315:45647-45666 None:intergenic 30.0%
!! TGGTGTAAATAAGGTATTGA+AGG - tig0025315:45688-45707 None:intergenic 30.0%
CTGCACTAATTAATAGAACA+TGG - tig0025315:45763-45782 None:intergenic 30.0%
CTATTAATTAGTGCAGATGA+TGG + tig0025315:45767-45786 Msa1421870:intron 30.0%
GAAAAATAAATGGAAAACCG+AGG + tig0025315:46051-46070 Msa1421870:CDS 30.0%
TCACAACTTTAAATCTGTCA+CGG - tig0025315:46111-46130 None:intergenic 30.0%
! GACAGATTTAAAGTTGTGAA+AGG + tig0025315:46112-46131 Msa1421870:CDS 30.0%
! GATTTAAAGTTGTGAAAGGA+AGG + tig0025315:46116-46135 Msa1421870:CDS 30.0%
ATCTTTGGCACTTAAATATG+AGG + tig0025315:46222-46241 Msa1421870:CDS 30.0%
TTATTTAAGTGATAGCATGG+TGG - tig0025315:46288-46307 None:intergenic 30.0%
TGTTTAATGATCAGTTTGTG+AGG + tig0025315:46332-46351 Msa1421870:intron 30.0%
!!! AACCCATCCATCATTTTTTA+TGG - tig0025315:46371-46390 None:intergenic 30.0%
ACAAGAAAAGCAACGTAAAT+CGG - tig0025315:46578-46597 None:intergenic 30.0%
!! TTGCTTTTCTTGTGTAAGAT+AGG + tig0025315:46585-46604 Msa1421870:intron 30.0%
! AGGTTTTCTTGCATCTTTTT+CGG + tig0025315:46628-46647 Msa1421870:intron 30.0%
AAATATCAATTGCATGCCAT+AGG + tig0025315:46762-46781 Msa1421870:intron 30.0%
CTTTGTAGTAAAACAAAGTG+GGG - tig0025315:46833-46852 None:intergenic 30.0%
GGAAAGATAGCAGAAAAAAT+TGG + tig0025315:47108-47127 Msa1421870:CDS 30.0%
!! ATTTCCATTCAATTTGTTGC+CGG - tig0025315:47179-47198 None:intergenic 30.0%
CAACAAATTGAATGGAAATG+TGG + tig0025315:47180-47199 Msa1421870:exon 30.0%
AAATTGAATGGAAATGTGGT+GGG + tig0025315:47184-47203 Msa1421870:exon 30.0%
! GGGCAGAATAAGAAATATTT+TGG + tig0025315:47204-47223 Msa1421870:three_prime_UTR 30.0%
!! TGAGCTATATTTTGGAAATG+TGG + tig0025315:47227-47246 Msa1421870:three_prime_UTR 30.0%
!! TAAATGATGGATTATCATCC+TGG - tig0025315:47290-47309 None:intergenic 30.0%
!!! CATAATTCTTTTAGGGCTAA+GGG + tig0025315:47348-47367 Msa1421870:three_prime_UTR 30.0%
CTATCAAGGGAAAGAATATA+TGG + tig0025315:47418-47437 Msa1421870:three_prime_UTR 30.0%
GGAAAGAATATATGGGTTTA+GGG + tig0025315:47426-47445 Msa1421870:three_prime_UTR 30.0%
GAAAGAATATATGGGTTTAG+GGG + tig0025315:47427-47446 Msa1421870:three_prime_UTR 30.0%
AAAGAATATATGGGTTTAGG+GGG + tig0025315:47428-47447 Msa1421870:three_prime_UTR 30.0%
! CATACAACATTGATAGTCAT+AGG + tig0025315:47595-47614 Msa1421870:three_prime_UTR 30.0%
!!! TTCATTCAGTGGATTGGTTT+TGG - tig0025315:38676-38695 None:intergenic 35.0%
! GGAAGATTTTGTTCATTCAG+TGG - tig0025315:38687-38706 None:intergenic 35.0%
!! TGAAAGAGTGTTGTTGATAG+CGG - tig0025315:38715-38734 None:intergenic 35.0%
AACTATGCTATGCTATGCTA+TGG - tig0025315:38743-38762 None:intergenic 35.0%
TAGCATAGCATAGCATAGTT+AGG + tig0025315:38743-38762 Msa1421870:five_prime_UTR 35.0%
AGCATAGCATAGCATAGTTA+GGG + tig0025315:38744-38763 Msa1421870:five_prime_UTR 35.0%
! ATTCTTCTCCTTCTTTTGTG+TGG - tig0025315:39042-39061 None:intergenic 35.0%
TGAAGGTCCAAGAAAAAGTA+TGG + tig0025315:39062-39081 Msa1421870:CDS 35.0%
! AGGATGGAGCAATTTTATGA+AGG + tig0025315:39102-39121 Msa1421870:CDS 35.0%
GGAATGAATTGTATGCTTGT+TGG + tig0025315:39177-39196 Msa1421870:intron 35.0%
CAGCATCAATGAGGATATAA+CGG - tig0025315:39212-39231 None:intergenic 35.0%
ACTATTAAGGACCACTTACT+CGG - tig0025315:39247-39266 None:intergenic 35.0%
!! TTTTTCAGCTATGATGACCT+TGG + tig0025315:39529-39548 Msa1421870:CDS 35.0%
!! GAAGCACTTGTTATAACACA+TGG + tig0025315:39607-39626 Msa1421870:CDS 35.0%
CATGGTCATGAAGATCATAT+CGG + tig0025315:39625-39644 Msa1421870:CDS 35.0%
! AGTCCTATGTCTAAAACATG+AGG - tig0025315:39965-39984 None:intergenic 35.0%
TTTAGACATAGGACTCTGAT+AGG + tig0025315:39970-39989 Msa1421870:intron 35.0%
TCAGAAAGAGAAAGGAAGAT+AGG - tig0025315:40127-40146 None:intergenic 35.0%
! GTTTTATGGGTCTTTTCCAA+AGG + tig0025315:40176-40195 Msa1421870:intron 35.0%
! ATGAAGTGTTAGAAGGAAGA+AGG - tig0025315:40500-40519 None:intergenic 35.0%
ATTACTTATCCTGGTTCATC+AGG + tig0025315:40595-40614 Msa1421870:intron 35.0%
!! TCCTTTACAATGGAGGTATT+CGG + tig0025315:40659-40678 Msa1421870:intron 35.0%
GTGTGTATCAACTAAACTGT+TGG + tig0025315:40732-40751 Msa1421870:intron 35.0%
GTATCAACTAAACTGTTGGT+AGG + tig0025315:40736-40755 Msa1421870:intron 35.0%
AGAAAAAATATCACCTTCCC+TGG - tig0025315:40919-40938 None:intergenic 35.0%
AAAAAACGTTTGAAGGAGCA+TGG + tig0025315:40954-40973 Msa1421870:CDS 35.0%
!! CTGATTGGTTCTATCTCAAA+TGG - tig0025315:41038-41057 None:intergenic 35.0%
! CATTTGAGATAGAACCAATC+AGG + tig0025315:41036-41055 Msa1421870:CDS 35.0%
ATGGAACTATTCTTCACACT+GGG + tig0025315:41108-41127 Msa1421870:CDS 35.0%
GGAGATTCAAGGTAAATGAA+AGG - tig0025315:41178-41197 None:intergenic 35.0%
TCAAAAACTTTCCCATCAAG+TGG - tig0025315:41239-41258 None:intergenic 35.0%
! TGATGGGAAAGTTTTTGATC+GGG + tig0025315:41241-41260 Msa1421870:CDS 35.0%
! TTAGAGGAACTCTCTAAAGA+AGG + tig0025315:41269-41288 Msa1421870:CDS 35.0%
! CTCTAAAGAAGGAGTAACAT+TGG + tig0025315:41280-41299 Msa1421870:CDS 35.0%
AAGCCATATTCAGCTTAACA+GGG - tig0025315:41506-41525 None:intergenic 35.0%
AAAGCCATATTCAGCTTAAC+AGG - tig0025315:41507-41526 None:intergenic 35.0%
TAAGCTGAATATGGCTTTCA+TGG + tig0025315:41509-41528 Msa1421870:intron 35.0%
ATGCTAATCACAAGCAAACA+TGG + tig0025315:41857-41876 Msa1421870:intron 35.0%
TTGTGGCAGATTCATTATTG+AGG + tig0025315:41955-41974 Msa1421870:CDS 35.0%
ACATTTCAGCTTCAAAAGGA+AGG + tig0025315:41979-41998 Msa1421870:CDS 35.0%
CATTTCAGCTTCAAAAGGAA+GGG + tig0025315:41980-41999 Msa1421870:CDS 35.0%
GATGTAGATTTGATGCAAAC+TGG - tig0025315:42016-42035 None:intergenic 35.0%
CAACTTTCTCCCAGTTAAAT+CGG - tig0025315:42063-42082 None:intergenic 35.0%
CAGAAAAGAATACTAGCTAG+TGG - tig0025315:42095-42114 None:intergenic 35.0%
CATTTATTACCAGAGTGGAT+GGG - tig0025315:42258-42277 None:intergenic 35.0%
! CAAAGCATTTATTACCAGAG+TGG - tig0025315:42263-42282 None:intergenic 35.0%
TCTTCCTAATTTGATGCACT+TGG + tig0025315:42300-42319 Msa1421870:intron 35.0%
TAGATTTCAGCATGACTGTA+TGG - tig0025315:42374-42393 None:intergenic 35.0%
CTCCCGAAGTTAAAATACAT+CGG - tig0025315:42568-42587 None:intergenic 35.0%
CTTGAAATCAGTGTAGTCAA+AGG - tig0025315:42616-42635 None:intergenic 35.0%
!! TTGACTACACTGATTTCAAG+AGG + tig0025315:42616-42635 Msa1421870:intron 35.0%
TGATTTCAAGAGGTTCATCA+TGG + tig0025315:42626-42645 Msa1421870:intron 35.0%
!! AGTTTAGTCTTGAAAGCAGA+TGG - tig0025315:42740-42759 None:intergenic 35.0%
ACATCTTTGGTAGAATTTCC+AGG + tig0025315:42835-42854 Msa1421870:intron 35.0%
CCTCGAAAGTTGTTAAAGTA+GGG - tig0025315:42872-42891 None:intergenic 35.0%
! TTTTACATAGGTGAAAGCAG+AGG + tig0025315:43071-43090 Msa1421870:intron 35.0%
TATTGATGCTTATGCACCTA+AGG + tig0025315:43095-43114 Msa1421870:CDS 35.0%
GTTACAATAAGCAGATCCTT+AGG - tig0025315:43114-43133 None:intergenic 35.0%
GATCTGCTTATTGTAACAAC+TGG + tig0025315:43117-43136 Msa1421870:CDS 35.0%
! GCCTTAAATCTTGCATCTTT+TGG + tig0025315:43261-43280 Msa1421870:CDS 35.0%
ATTCATCATTTCCATCACAC+GGG - tig0025315:43561-43580 None:intergenic 35.0%
GATTCATCATTTCCATCACA+CGG - tig0025315:43562-43581 None:intergenic 35.0%
ATGAATCGCATATCAGAGAT+TGG + tig0025315:43575-43594 Msa1421870:CDS 35.0%
TCGATACGTAAACTAAAAGG+AGG - tig0025315:43704-43723 None:intergenic 35.0%
TGTACAGGAAGAAAATGTTG+CGG - tig0025315:44117-44136 None:intergenic 35.0%
! CAACATTTTCTTCCTGTACA+TGG + tig0025315:44117-44136 Msa1421870:CDS 35.0%
AACAAGTATTCTCCATGTAC+AGG - tig0025315:44132-44151 None:intergenic 35.0%
GAATCACTTGGAAAATCAAC+TGG + tig0025315:44165-44184 Msa1421870:CDS 35.0%
TTGGAAAATCAACTGGCATT+CGG + tig0025315:44172-44191 Msa1421870:CDS 35.0%
CTTTATCACAAGATCTGTCT+GGG - tig0025315:44221-44240 None:intergenic 35.0%
TCTTTATCACAAGATCTGTC+TGG - tig0025315:44222-44241 None:intergenic 35.0%
ATGCACCAGGTTATTAAGAA+TGG + tig0025315:44302-44321 Msa1421870:intron 35.0%
TCTCTCCATTCTTAATAACC+TGG - tig0025315:44310-44329 None:intergenic 35.0%
ATTAAGAATGGAGAGATGCT+TGG + tig0025315:44314-44333 Msa1421870:CDS 35.0%
TCTAATGGTTTCATTTCCCT+TGG + tig0025315:44368-44387 Msa1421870:CDS 35.0%
TAGATGGCATCATTGTGATT+AGG + tig0025315:44571-44590 Msa1421870:CDS 35.0%
GAATTACCACAAGATGTCTA+TGG + tig0025315:44735-44754 Msa1421870:CDS 35.0%
TATGGCAATGGCAATTACTT+CGG - tig0025315:44909-44928 None:intergenic 35.0%
ATCAACATTTAGAAGATCCG+TGG + tig0025315:45003-45022 Msa1421870:CDS 35.0%
ATCCGTGGATGAACATAAAA+AGG + tig0025315:45018-45037 Msa1421870:CDS 35.0%
ATATTGAACTGTCAACTGCT+GGG + tig0025315:45099-45118 Msa1421870:intron 35.0%
!! CTGCTTTTACCATGGATATA+TGG - tig0025315:45247-45266 None:intergenic 35.0%
TATGTGAACCGATCTAACTA+TGG + tig0025315:45465-45484 Msa1421870:intron 35.0%
AAGCTAAGAAGTCTCACTTT+GGG + tig0025315:45568-45587 Msa1421870:intron 35.0%
TTTGGGTGTAAATCTTGAGA+CGG + tig0025315:45585-45604 Msa1421870:intron 35.0%
AAGGCGATTTATCTGATTCA+GGG + tig0025315:45843-45862 Msa1421870:CDS 35.0%
TTTATCTGATTCAGGGGAAT+CGG + tig0025315:45850-45869 Msa1421870:CDS 35.0%
! TCAACTGATGATGCAATGAA+TGG - tig0025315:45890-45909 None:intergenic 35.0%
CAATGGTTATGTTTCACGAA+AGG + tig0025315:45928-45947 Msa1421870:CDS 35.0%
ATCAGACATTTCTTCAGACT+TGG - tig0025315:46002-46021 None:intergenic 35.0%
!!! TTTACTGATTTTGGAGACTC+TGG - tig0025315:46031-46050 None:intergenic 35.0%
!! TCAAGAAGCTGATTGATTTG+CGG + tig0025315:46077-46096 Msa1421870:CDS 35.0%
TAAAGTTGTGAAAGGAAGGA+TGG + tig0025315:46120-46139 Msa1421870:CDS 35.0%
CAAATCTTTGTGGACATCTT+TGG + tig0025315:46207-46226 Msa1421870:CDS 35.0%
AGGGAGAAAATTTCATGGAT+TGG - tig0025315:46418-46437 None:intergenic 35.0%
TCAAGGTCAATTTAGTACGA+GGG - tig0025315:46437-46456 None:intergenic 35.0%
CTGATATAGAAGTTTCCTCA+AGG - tig0025315:46454-46473 None:intergenic 35.0%
TGAAACTACAACTTACATGG+TGG + tig0025315:46653-46672 Msa1421870:intron 35.0%
! AAAAGGGTATGTACTACCTA+TGG - tig0025315:46781-46800 None:intergenic 35.0%
! ACATACCCTTTTATCATTGC+TGG + tig0025315:46789-46808 Msa1421870:intron 35.0%
CGAAAAAAGACAGAGTTGAA+CGG - tig0025315:46872-46891 None:intergenic 35.0%
! TTCAGCTTTAGTACAAGTGT+AGG + tig0025315:47002-47021 Msa1421870:intron 35.0%
TCTAATCAGGAGATCAAGAA+CGG + tig0025315:47086-47105 Msa1421870:intron 35.0%
AATATCTTGAGGACATGGAA+AGG + tig0025315:47132-47151 Msa1421870:CDS 35.0%
CAAATTGAATGGAAATGTGG+TGG + tig0025315:47183-47202 Msa1421870:exon 35.0%
!! GCTATATTTTGGAAATGTGG+CGG + tig0025315:47230-47249 Msa1421870:three_prime_UTR 35.0%
!! CTATATTTTGGAAATGTGGC+GGG + tig0025315:47231-47250 Msa1421870:three_prime_UTR 35.0%
ATCCATCATTTACATGGTTC+TGG + tig0025315:47298-47317 Msa1421870:three_prime_UTR 35.0%
TACCAGAACCATGTAAATGA+TGG - tig0025315:47303-47322 None:intergenic 35.0%
!! TTTACATGGTTCTGGTAACA+TGG + tig0025315:47306-47325 Msa1421870:three_prime_UTR 35.0%
CCTTAGCCCTAAAAGAATTA+TGG - tig0025315:47350-47369 None:intergenic 35.0%
!!! CCATAATTCTTTTAGGGCTA+AGG + tig0025315:47347-47366 Msa1421870:three_prime_UTR 35.0%
AAGGGAATAGGCAACATAAA+AGG + tig0025315:47366-47385 Msa1421870:three_prime_UTR 35.0%
AGGGAATAGGCAACATAAAA+GGG + tig0025315:47367-47386 Msa1421870:three_prime_UTR 35.0%
ATAGGCAACATAAAAGGGAT+TGG + tig0025315:47372-47391 Msa1421870:three_prime_UTR 35.0%
GGGAAAGAATATATGGGTTT+AGG + tig0025315:47425-47444 Msa1421870:three_prime_UTR 35.0%
! AAAAATATTGGGGCGTCTAT+TGG - tig0025315:47471-47490 None:intergenic 35.0%
! ATTTTGTTAGTGGCACGTTT+TGG + tig0025315:47534-47553 Msa1421870:three_prime_UTR 35.0%
! TTTTGTTAGTGGCACGTTTT+GGG + tig0025315:47535-47554 Msa1421870:three_prime_UTR 35.0%
GCAAATCAAGCTATCATCAA+GGG - tig0025315:47640-47659 None:intergenic 35.0%
AGCAAATCAAGCTATCATCA+AGG - tig0025315:47641-47660 None:intergenic 35.0%
!! GAAAGAGTGTTGTTGATAGC+GGG - tig0025315:38714-38733 None:intergenic 40.0%
!! TGAGAGTGTTGAAGCTGAAA+CGG - tig0025315:38863-38882 None:intergenic 40.0%
AATGCACGAGTAGGAAATGA+TGG + tig0025315:39000-39019 Msa1421870:intron 40.0%
! CTAGAGTACCACACAAAAGA+AGG + tig0025315:39031-39050 Msa1421870:CDS 40.0%
TGGAAGATTCTGTTCAACGT+AGG + tig0025315:39082-39101 Msa1421870:CDS 40.0%
AGATTCTGTTCAACGTAGGA+TGG + tig0025315:39086-39105 Msa1421870:CDS 40.0%
ATAGGAAGAACACGTAATGG+CGG - tig0025315:39138-39157 None:intergenic 40.0%
CCAATAGGAAGAACACGTAA+TGG - tig0025315:39141-39160 None:intergenic 40.0%
CCATTACGTGTTCTTCCTAT+TGG + tig0025315:39138-39157 Msa1421870:CDS 40.0%
TTACGTGTTCTTCCTATTGG+TGG + tig0025315:39141-39160 Msa1421870:CDS 40.0%
! TGTTCTTCCTATTGGTGGTT+TGG + tig0025315:39146-39165 Msa1421870:CDS 40.0%
! GTTCTTCCTATTGGTGGTTT+GGG + tig0025315:39147-39166 Msa1421870:CDS 40.0%
ATTTCACCCAAACCACCAAT+AGG - tig0025315:39156-39175 None:intergenic 40.0%
! ATTGGTGGTTTGGGTGAAAT+TGG + tig0025315:39156-39175 Msa1421870:CDS 40.0%
CGTTATATCCTCATTGATGC+TGG + tig0025315:39210-39229 Msa1421870:intron 40.0%
ACATGATACCAGCATCAATG+AGG - tig0025315:39221-39240 None:intergenic 40.0%
TATCATGTTTCCCGAGTAAG+TGG + tig0025315:39233-39252 Msa1421870:intron 40.0%
CTATTAAGGACCACTTACTC+GGG - tig0025315:39246-39265 None:intergenic 40.0%
! TTTTCCATAAGCTCTCTCTC+AGG - tig0025315:39304-39323 None:intergenic 40.0%
TCTACTAACATAAGCACCTG+TGG - tig0025315:39390-39409 None:intergenic 40.0%
GGTAATGCTTCCATCTCTAT+TGG + tig0025315:39660-39679 Msa1421870:intron 40.0%
! AGCACTCTTTTGTTCATGGA+AGG + tig0025315:39815-39834 Msa1421870:intron 40.0%
! ACTCTTTTGTTCATGGAAGG+AGG + tig0025315:39818-39837 Msa1421870:intron 40.0%
!! TAATTCTACAGTTGGTGGCT+CGG + tig0025315:39933-39952 Msa1421870:intron 40.0%
!! GTGCCTCATGTTTTAGACAT+AGG + tig0025315:39959-39978 Msa1421870:intron 40.0%
! TAGGACTCTGATAGGTTTTC+TGG + tig0025315:39978-39997 Msa1421870:intron 40.0%
TCGCTACAAGCTTGAACAAT+TGG + tig0025315:40017-40036 Msa1421870:intron 40.0%
ATATTTCCTTGGTTGGGACT+TGG + tig0025315:40059-40078 Msa1421870:intron 40.0%
TATTTCCTTGGTTGGGACTT+GGG + tig0025315:40060-40079 Msa1421870:intron 40.0%
!! AAATAGCCTTGTGACTTGTG+AGG - tig0025315:40287-40306 None:intergenic 40.0%
GTGTATTGGAATCCAATGCT+GGG - tig0025315:40625-40644 None:intergenic 40.0%
TGCATCTTCCTTTACAATGG+AGG + tig0025315:40652-40671 Msa1421870:CDS 40.0%
ACAAAGAACAAGTTTGTCGC+TGG + tig0025315:41011-41030 Msa1421870:CDS 40.0%
CAAAGAACAAGTTTGTCGCT+GGG + tig0025315:41012-41031 Msa1421870:CDS 40.0%
ATAGAATGAGTCACCCTGAT+TGG - tig0025315:41053-41072 None:intergenic 40.0%
CATTCTATTCCTGACTGTTG+TGG + tig0025315:41065-41084 Msa1421870:CDS 40.0%
! CTAGTTCTTCGTTGTTCTGA+TGG + tig0025315:41089-41108 Msa1421870:CDS 40.0%
GATGGAACTATTCTTCACAC+TGG + tig0025315:41107-41126 Msa1421870:CDS 40.0%
TGGAACTATTCTTCACACTG+GGG + tig0025315:41109-41128 Msa1421870:CDS 40.0%
TTTCAGCAACAGGAGATTCA+AGG - tig0025315:41189-41208 None:intergenic 40.0%
TGAATCTCCTGTTGCTGAAA+AGG + tig0025315:41189-41208 Msa1421870:CDS 40.0%
! GAATCAACCTTTTCAGCAAC+AGG - tig0025315:41199-41218 None:intergenic 40.0%
AGTAACATTGGTAAGTCACC+TGG + tig0025315:41292-41311 Msa1421870:intron 40.0%
GTAGTTAGTAGCAAAGATCC+AGG - tig0025315:41313-41332 None:intergenic 40.0%
GGATCTTTGCTACTAACTAC+TGG + tig0025315:41313-41332 Msa1421870:intron 40.0%
GGCTACTAACAGTTTACTTG+AGG + tig0025315:41425-41444 Msa1421870:intron 40.0%
AGTCCCTGTTAAGCTGAATA+TGG + tig0025315:41500-41519 Msa1421870:intron 40.0%
ATCACAAGCAAACATGGCTT+TGG + tig0025315:41863-41882 Msa1421870:intron 40.0%
AGGCACATTTCAGCTTCAAA+AGG + tig0025315:41975-41994 Msa1421870:CDS 40.0%
GCATCAAATCTACATCGGAT+TGG + tig0025315:42020-42039 Msa1421870:CDS 40.0%
CGATTTAACTGGGAGAAAGT+TGG + tig0025315:42061-42080 Msa1421870:CDS 40.0%
ATACTTAGAAGCAGCTTGGA+AGG + tig0025315:42213-42232 Msa1421870:CDS 40.0%
GCATTTATTACCAGAGTGGA+TGG - tig0025315:42259-42278 None:intergenic 40.0%
GTCACCAAGTGCATCAAATT+AGG - tig0025315:42307-42326 None:intergenic 40.0%
! AATTTGATGCACTTGGTGAC+TGG + tig0025315:42307-42326 Msa1421870:intron 40.0%
!! GGTTGTGGTTTTACAGAAGT+TGG + tig0025315:42459-42478 Msa1421870:intron 40.0%
CCCTACTTTAACAACTTTCG+AGG + tig0025315:42869-42888 Msa1421870:intron 40.0%
GCCTCGAAAGTTGTTAAAGT+AGG - tig0025315:42873-42892 None:intergenic 40.0%
CCTTGGTAAGTTTGAAAGCA+TGG - tig0025315:43293-43312 None:intergenic 40.0%
CCATGCTTTCAAACTTACCA+AGG + tig0025315:43290-43309 Msa1421870:CDS 40.0%
GGATTGGAAGTTAGAATAGC+AGG - tig0025315:43436-43455 None:intergenic 40.0%
!! AAGGTGTTGCTAGAAAGGAT+TGG - tig0025315:43452-43471 None:intergenic 40.0%
TCAATTTGTCAGGTTATCCC+TGG + tig0025315:43527-43546 Msa1421870:intron 40.0%
ACATGCATATCGTGGAGAAT+TGG + tig0025315:43643-43662 Msa1421870:CDS 40.0%
AGAACAGGGAAAACATTGGA+AGG - tig0025315:43868-43887 None:intergenic 40.0%
AAGGAGAACAGGGAAAACAT+TGG - tig0025315:43872-43891 None:intergenic 40.0%
TCCCTGTTCTCCTTAGTATT+TGG + tig0025315:43878-43897 Msa1421870:intron 40.0%
CCCAAATACTAAGGAGAACA+GGG - tig0025315:43882-43901 None:intergenic 40.0%
CCCTGTTCTCCTTAGTATTT+GGG + tig0025315:43879-43898 Msa1421870:intron 40.0%
ACCCAAATACTAAGGAGAAC+AGG - tig0025315:43883-43902 None:intergenic 40.0%
TGGAGAATACTTGTTCCTGA+AGG + tig0025315:44137-44156 Msa1421870:CDS 40.0%
ACTGATGATCTTTATGCACC+AGG + tig0025315:44289-44308 Msa1421870:intron 40.0%
! AGTGATGGTGACAAAGCATT+TGG + tig0025315:44504-44523 Msa1421870:CDS 40.0%
! GACAAAGCATTTGGTACATC+CGG + tig0025315:44513-44532 Msa1421870:CDS 40.0%
TTCATCAAGGAAGAGTTCAC+CGG - tig0025315:44535-44554 None:intergenic 40.0%
TTGGCTGGAAACACCTTAAA+AGG + tig0025315:44704-44723 Msa1421870:CDS 40.0%
TGGCTGGAAACACCTTAAAA+GGG + tig0025315:44705-44724 Msa1421870:CDS 40.0%
TCACATGGAAAGAACTGTGT+CGG + tig0025315:44841-44860 Msa1421870:CDS 40.0%
! TGAGGAAGTACAGTGGTAAA+CGG + tig0025315:44882-44901 Msa1421870:CDS 40.0%
ATGGCAATGGCAATTACTTC+GGG - tig0025315:44908-44927 None:intergenic 40.0%
! TCCAGGATTTTCTATGGCAA+TGG - tig0025315:44921-44940 None:intergenic 40.0%
! AACTGCTCCAGGATTTTCTA+TGG - tig0025315:44927-44946 None:intergenic 40.0%
CATATTGAACTGTCAACTGC+TGG + tig0025315:45098-45117 Msa1421870:intron 40.0%
!! ATCTGGTTGGTTCACTTTTG+TGG + tig0025315:45122-45141 Msa1421870:intron 40.0%
TATCCATGGTAAAAGCAGAG+TGG + tig0025315:45249-45268 Msa1421870:intron 40.0%
AAAATAGACCAGCTGAATGC+AGG - tig0025315:45419-45438 None:intergenic 40.0%
TCACAAAACAATGCTGGTGA+AGG + tig0025315:45509-45528 Msa1421870:intron 40.0%
GAAGCTAAGAAGTCTCACTT+TGG + tig0025315:45567-45586 Msa1421870:intron 40.0%
GAAGGCGATTTATCTGATTC+AGG + tig0025315:45842-45861 Msa1421870:CDS 40.0%
AGGCGATTTATCTGATTCAG+GGG + tig0025315:45844-45863 Msa1421870:CDS 40.0%
AATCAGCTTCTTGACTTCCT+CGG - tig0025315:46071-46090 None:intergenic 40.0%
CAACTTTAAATCTGTCACGG+AGG - tig0025315:46108-46127 None:intergenic 40.0%
AGAGATATCTCAGAGCTTGT+TGG + tig0025315:46153-46172 Msa1421870:CDS 40.0%
CACAAAGATTTGCATTGTCC+AGG - tig0025315:46199-46218 None:intergenic 40.0%
CTGGACAATGCAAATCTTTG+TGG + tig0025315:46197-46216 Msa1421870:CDS 40.0%
GATCAGTTTGTGAGGTACAA+AGG + tig0025315:46340-46359 Msa1421870:intron 40.0%
GTACGAGGGAGAAAATTTCA+TGG - tig0025315:46423-46442 None:intergenic 40.0%
CTCAAGGTCAATTTAGTACG+AGG - tig0025315:46438-46457 None:intergenic 40.0%
CTCGTACTAAATTGACCTTG+AGG + tig0025315:46436-46455 Msa1421870:intron 40.0%
GCGTGAAACTACAACTTACA+TGG + tig0025315:46650-46669 Msa1421870:intron 40.0%
AAGCAATTGAAGGGAGGATT+AGG - tig0025315:46690-46709 None:intergenic 40.0%
AGCTGTGTGAAGCAATTGAA+GGG - tig0025315:46699-46718 None:intergenic 40.0%
TAGCTGTGTGAAGCAATTGA+AGG - tig0025315:46700-46719 None:intergenic 40.0%
TTCAATTGCTTCACACAGCT+AGG + tig0025315:46699-46718 Msa1421870:intron 40.0%
AGTCGCCAGCAATGATAAAA+GGG - tig0025315:46797-46816 None:intergenic 40.0%
AAGTCGCCAGCAATGATAAA+AGG - tig0025315:46798-46817 None:intergenic 40.0%
CTAATCAGGAGATCAAGAAC+GGG + tig0025315:47087-47106 Msa1421870:intron 40.0%
TTGGCAATATCTTGAGGACA+TGG + tig0025315:47127-47146 Msa1421870:CDS 40.0%
ATTGTCTAGCGATGAAACAC+CGG + tig0025315:47157-47176 Msa1421870:CDS 40.0%
AACACCGGCAACAAATTGAA+TGG + tig0025315:47172-47191 Msa1421870:exon 40.0%
!!! TCTTTTAGGGCTAAGGGAAT+AGG + tig0025315:47354-47373 Msa1421870:three_prime_UTR 40.0%
TAACCCAAGCTAAGCTATCA+AGG + tig0025315:47404-47423 Msa1421870:three_prime_UTR 40.0%
AACCCAAGCTAAGCTATCAA+GGG + tig0025315:47405-47424 Msa1421870:three_prime_UTR 40.0%
! TTCCCTTGATAGCTTAGCTT+GGG - tig0025315:47410-47429 None:intergenic 40.0%
! TTTCCCTTGATAGCTTAGCT+TGG - tig0025315:47411-47430 None:intergenic 40.0%
TGTAAATGTCTTCTGCGTTG+TGG + tig0025315:47569-47588 Msa1421870:three_prime_UTR 40.0%
!! GTGTTGTTGATAGCGGGAAA+TGG - tig0025315:38708-38727 None:intergenic 45.0%
!! AGAGTCTGGTTGGTTTAGAG+CGG - tig0025315:38840-38859 None:intergenic 45.0%
AATGTTGTTGTCGCTACCTG+AGG - tig0025315:38887-38906 None:intergenic 45.0%
!! AGAGATGGAAGCATTACCCA+AGG - tig0025315:39658-39677 None:intergenic 45.0%
TTCCATCTCTATTGGACTGC+TGG + tig0025315:39668-39687 Msa1421870:intron 45.0%
!! AATTCTACAGTTGGTGGCTC+GGG + tig0025315:39934-39953 Msa1421870:intron 45.0%
!!! ATAGGTTTTCTGGCTACCTG+TGG + tig0025315:39988-40007 Msa1421870:intron 45.0%
CAAAGAGGCTGCTGCATAAT+AGG + tig0025315:40383-40402 Msa1421870:intron 45.0%
GGTGTATTGGAATCCAATGC+TGG - tig0025315:40626-40645 None:intergenic 45.0%
GCCGAATACCTCCATTGTAA+AGG - tig0025315:40663-40682 None:intergenic 45.0%
TATTCTGTCCATTGCAGTCC+AGG + tig0025315:40898-40917 Msa1421870:intron 45.0%
ATTCTGTCCATTGCAGTCCA+GGG + tig0025315:40899-40918 Msa1421870:intron 45.0%
AGAACTAGTCCACAACAGTC+AGG - tig0025315:41077-41096 None:intergenic 45.0%
CTATTCTTCACACTGGGGAT+TGG + tig0025315:41114-41133 Msa1421870:CDS 45.0%
ATTGACGAGACACCACTTGA+TGG + tig0025315:41224-41243 Msa1421870:CDS 45.0%
TTGACGAGACACCACTTGAT+GGG + tig0025315:41225-41244 Msa1421870:CDS 45.0%
! TGGGAAAGTTTTTGATCGGG+AGG + tig0025315:41244-41263 Msa1421870:CDS 45.0%
! GGGAAAGTTTTTGATCGGGA+GGG + tig0025315:41245-41264 Msa1421870:CDS 45.0%
! TTTTGATCGGGAGGGTTTAG+AGG + tig0025315:41253-41272 Msa1421870:CDS 45.0%
TCAACAAATGTGCTCTCACC+TGG + tig0025315:41912-41931 Msa1421870:CDS 45.0%
GACAACCAGTGAATCTGTTG+TGG + tig0025315:41938-41957 Msa1421870:CDS 45.0%
ATCTGCCACAACAGATTCAC+TGG - tig0025315:41946-41965 None:intergenic 45.0%
!! AAAGCTGCTGCCGATTTAAC+TGG + tig0025315:42050-42069 Msa1421870:CDS 45.0%
!! AAGCTGCTGCCGATTTAACT+GGG + tig0025315:42051-42070 Msa1421870:CDS 45.0%
GGACATACTTAGAAGCAGCT+TGG + tig0025315:42209-42228 Msa1421870:CDS 45.0%
TTAGAAGCAGCTTGGAAGGA+TGG + tig0025315:42217-42236 Msa1421870:CDS 45.0%
TATGGTCCATGTGTTGGGAT+GGG - tig0025315:42356-42375 None:intergenic 45.0%
GACTGTATGGTCCATGTGTT+GGG - tig0025315:42361-42380 None:intergenic 45.0%
TGACTGTATGGTCCATGTGT+TGG - tig0025315:42362-42381 None:intergenic 45.0%
AGCAGAAATGCAGTGCATGT+AGG + tig0025315:42427-42446 Msa1421870:intron 45.0%
AGTAGGGAGTAAATACTGCC+TGG - tig0025315:42856-42875 None:intergenic 45.0%
ACATCTGGACATGCATATCG+TGG + tig0025315:43635-43654 Msa1421870:CDS 45.0%
GAGGTGATTGTCTATCTTCG+TGG + tig0025315:43912-43931 Msa1421870:intron 45.0%
CAAGTGATTCATGCTCCTTC+AGG - tig0025315:44155-44174 None:intergenic 45.0%
! CTGAAGGAGCATGAATCACT+TGG + tig0025315:44153-44172 Msa1421870:CDS 45.0%
AAGATCTGTCTGGGAGGAAA+TGG - tig0025315:44212-44231 None:intergenic 45.0%
TATCACAAGATCTGTCTGGG+AGG - tig0025315:44218-44237 None:intergenic 45.0%
TACCACAAGATGTCTATGGC+TGG + tig0025315:44739-44758 Msa1421870:CDS 45.0%
AGATGTCTATGGCTGGACAA+AGG + tig0025315:44746-44765 Msa1421870:CDS 45.0%
GATGTCTATGGCTGGACAAA+GGG + tig0025315:44747-44766 Msa1421870:CDS 45.0%
AGATGTTGAGGAAGATGGTG+AGG + tig0025315:44864-44883 Msa1421870:CDS 45.0%
! AAGATGGTGAGGAAGTACAG+TGG + tig0025315:44875-44894 Msa1421870:CDS 45.0%
GCCATTGCCATAGAAAATCC+TGG + tig0025315:44917-44936 Msa1421870:CDS 45.0%
TCATCAGCAAAAACTGCTCC+AGG - tig0025315:44938-44957 None:intergenic 45.0%
TGATATTCCAGGACCAACGT+GGG - tig0025315:44987-45006 None:intergenic 45.0%
TTGATATTCCAGGACCAACG+TGG - tig0025315:44988-45007 None:intergenic 45.0%
CCATGGATATATGGGATCGT+TGG - tig0025315:45238-45257 None:intergenic 45.0%
CCAACGATCCCATATATCCA+TGG + tig0025315:45235-45254 Msa1421870:intron 45.0%
GTTATTGGCATGTGACACTC+AGG + tig0025315:45391-45410 Msa1421870:intron 45.0%
!! GATGATGGCATTGACACAGA+AGG + tig0025315:45782-45801 Msa1421870:intron 45.0%
GAGAAAGAGACCACTACAAC+TGG + tig0025315:45815-45834 Msa1421870:CDS 45.0%
! CAGGGGAATCGGATGAATTT+TGG + tig0025315:45861-45880 Msa1421870:CDS 45.0%
! ACAACTTACATGGTGGAGTG+AGG + tig0025315:46660-46679 Msa1421870:intron 45.0%
TGTGTGAAGCAATTGAAGGG+AGG - tig0025315:46696-46715 None:intergenic 45.0%
AATGACCACAAGTCTGAGCT+AGG + tig0025315:47261-47280 Msa1421870:three_prime_UTR 45.0%
GTTCTGGTAACATGGACCAT+TGG + tig0025315:47314-47333 Msa1421870:three_prime_UTR 45.0%
AAATGTCTTCTGCGTTGTGG+TGG + tig0025315:47572-47591 Msa1421870:three_prime_UTR 45.0%
!! TCTGGTTGGTTTAGAGCGGA+GGG - tig0025315:38836-38855 None:intergenic 50.0%
TGAAGCTGAAACGGAGAGTC+TGG - tig0025315:38854-38873 None:intergenic 50.0%
CCATAAGCTCTCTCTCAGGA+TGG - tig0025315:39300-39319 None:intergenic 50.0%
CCATCCTGAGAGAGAGCTTA+TGG + tig0025315:39297-39316 Msa1421870:intron 50.0%
ATCATATCGGTGCGTTGCCT+TGG + tig0025315:39638-39657 Msa1421870:CDS 50.0%
TCATATCGGTGCGTTGCCTT+GGG + tig0025315:39639-39658 Msa1421870:CDS 50.0%
AGCCAGCAGTCCAATAGAGA+TGG - tig0025315:39673-39692 None:intergenic 50.0%
TCATCAGGTCATCCCAGCAT+TGG + tig0025315:40610-40629 Msa1421870:intron 50.0%
TCTTCACACTGGGGATTGGA+AGG + tig0025315:41118-41137 Msa1421870:CDS 50.0%
! GAAGAGCATGAGAGTTTCGC+AGG + tig0025315:41404-41423 Msa1421870:intron 50.0%
! TTGTGGTGATGCTCTCTGAG+CGG + tig0025315:41468-41487 Msa1421870:intron 50.0%
TTCATGGTCAGTTGCAGTGC+TGG + tig0025315:41525-41544 Msa1421870:intron 50.0%
! GTGCTGGTAGATCTGCTCAA+AGG + tig0025315:41541-41560 Msa1421870:intron 50.0%
CAAATGTGCTCTCACCTGGA+AGG + tig0025315:41916-41935 Msa1421870:CDS 50.0%
! GATTCACTGGTTGTCCTTCC+AGG - tig0025315:41933-41952 None:intergenic 50.0%
AGCAGCTTGGAAGGATGGAA+AGG + tig0025315:42222-42241 Msa1421870:CDS 50.0%
TCCATTTGACCCATCCACTC+TGG + tig0025315:42246-42265 Msa1421870:CDS 50.0%
ACCAGAGTGGATGGGTCAAA+TGG - tig0025315:42250-42269 None:intergenic 50.0%
ATGGTCCATGTGTTGGGATG+GGG - tig0025315:42355-42374 None:intergenic 50.0%
GTATGGTCCATGTGTTGGGA+TGG - tig0025315:42357-42376 None:intergenic 50.0%
AGTGCATGTAGGCAAGTCAC+TGG + tig0025315:42438-42457 Msa1421870:intron 50.0%
! TGTAGGCAAGTCACTGGTTG+TGG + tig0025315:42444-42463 Msa1421870:intron 50.0%
! GCAAGATTTAAGGCAGCACG+TGG - tig0025315:43255-43274 None:intergenic 50.0%
TCACACGGGACTCATTACCA+GGG - tig0025315:43547-43566 None:intergenic 50.0%
ATCACACGGGACTCATTACC+AGG - tig0025315:43548-43567 None:intergenic 50.0%
! TGGTAATGAGTCCCGTGTGA+TGG + tig0025315:43547-43566 Msa1421870:CDS 50.0%
GTGGCCCTGAGTATACTCTT+TGG + tig0025315:44411-44430 Msa1421870:intron 50.0%
! GGGGCCAAAGAGTATACTCA+GGG - tig0025315:44418-44437 None:intergenic 50.0%
! AGGGGCCAAAGAGTATACTC+AGG - tig0025315:44419-44438 None:intergenic 50.0%
GTCCAGCCATAGACATCTTG+TGG - tig0025315:44744-44763 None:intergenic 50.0%
!! TGAGCCAGTGGACTTTTGAC+GGG - tig0025315:44824-44843 None:intergenic 50.0%
!! GTGAGCCAGTGGACTTTTGA+CGG - tig0025315:44825-44844 None:intergenic 50.0%
!! CAAAAGTCCACTGGCTCACA+TGG + tig0025315:44826-44845 Msa1421870:CDS 50.0%
GTTCTTTCCATGTGAGCCAG+TGG - tig0025315:44836-44855 None:intergenic 50.0%
GAACTGTGTCGGAGATGTTG+AGG + tig0025315:44852-44871 Msa1421870:CDS 50.0%
GTCGGAGATGTTGAGGAAGA+TGG + tig0025315:44859-44878 Msa1421870:CDS 50.0%
TTGTCTGGCAAATCCCACGT+TGG + tig0025315:44971-44990 Msa1421870:CDS 50.0%
TTGTTTGCAGTGTGCTGGAC+TGG - tig0025315:45048-45067 None:intergenic 50.0%
TCCAGCACACTGCAAACAAG+AGG + tig0025315:45049-45068 Msa1421870:CDS 50.0%
! ACCTCTTGTTTGCAGTGTGC+TGG - tig0025315:45053-45072 None:intergenic 50.0%
AACTGTCAACTGCTGGGATC+TGG + tig0025315:45105-45124 Msa1421870:intron 50.0%
!! CTGCCACTCTGCTTTTACCA+TGG - tig0025315:45255-45274 None:intergenic 50.0%
CATGGTAAAAGCAGAGTGGC+AGG + tig0025315:45253-45272 Msa1421870:intron 50.0%
GGGTGTAAATCTTGAGACGG+TGG + tig0025315:45588-45607 Msa1421870:intron 50.0%
ACCACTACAACTGGAGCTGA+AGG + tig0025315:45824-45843 Msa1421870:CDS 50.0%
TGAAAGGAAGGATGGCTCTC+TGG + tig0025315:46128-46147 Msa1421870:CDS 50.0%
GAAAGGAAGGATGGCTCTCT+GGG + tig0025315:46129-46148 Msa1421870:CDS 50.0%
!! TCTCAGAGCTTGTTGGCTGA+TGG + tig0025315:46160-46179 Msa1421870:CDS 50.0%
!! CTCAGAGCTTGTTGGCTGAT+GGG + tig0025315:46161-46180 Msa1421870:CDS 50.0%
! TTTAGAGCGGAGGGAGAGGA+GGG - tig0025315:38827-38846 None:intergenic 55.0%
! TTGGTTTAGAGCGGAGGGAG+AGG - tig0025315:38831-38850 None:intergenic 55.0%
!! GTCTGGTTGGTTTAGAGCGG+AGG - tig0025315:38837-38856 None:intergenic 55.0%
GCTGAAACGGAGAGTCTGGT+TGG - tig0025315:38850-38869 None:intergenic 55.0%
GCTTCAACACTCTCAGCCTC+AGG + tig0025315:38868-38887 Msa1421870:CDS 55.0%
CTCTCAAGCAGTCTCACCAC+AGG + tig0025315:39371-39390 Msa1421870:intron 55.0%
CTTGTAGCGAAGTGTGCCAC+AGG - tig0025315:40007-40026 None:intergenic 55.0%
GTAGTCCCAAGTCCCAACCA+AGG - tig0025315:40068-40087 None:intergenic 55.0%
TGTGGGCCTCACAAGTCACA+AGG + tig0025315:40278-40297 Msa1421870:intron 55.0%
CTGGGATGACCTGATGAACC+AGG - tig0025315:40607-40626 None:intergenic 55.0%
TGTCCATTGCAGTCCAGGGA+AGG + tig0025315:40903-40922 Msa1421870:intron 55.0%
TCACCTTCCCTGGACTGCAA+TGG - tig0025315:40909-40928 None:intergenic 55.0%
TGGTCCATGTGTTGGGATGG+GGG - tig0025315:42354-42373 None:intergenic 55.0%
CTGTCCCGTCAAAAGTCCAC+TGG + tig0025315:44817-44836 Msa1421870:CDS 55.0%
GTCAACTGCTGGGATCTGGT+TGG + tig0025315:45109-45128 Msa1421870:intron 55.0%
CAGAGTGGCAGGCAACAATC+AGG + tig0025315:45264-45283 Msa1421870:intron 55.0%
CTCAGGTTCCTGCATTCAGC+TGG + tig0025315:45408-45427 Msa1421870:intron 55.0%
GCCTTCAGCTCCAGTTGTAG+TGG - tig0025315:45828-45847 None:intergenic 55.0%
GATGGGATCAGCAGAAGTCC+TGG + tig0025315:46178-46197 Msa1421870:CDS 55.0%
GGTCACCTAGCTCAGACTTG+TGG - tig0025315:47269-47288 None:intergenic 55.0%
CAAGTCTGAGCTAGGTGACC+AGG + tig0025315:47269-47288 Msa1421870:three_prime_UTR 55.0%
GGAGTGAGGAAGTGGAGGGA+GGG - tig0025315:38806-38825 None:intergenic 60.0%
GGAGGGAGTGAGGAAGTGGA+GGG - tig0025315:38810-38829 None:intergenic 60.0%
AGGAGGGAGTGAGGAAGTGG+AGG - tig0025315:38811-38830 None:intergenic 60.0%
GAGAGGAGGGAGTGAGGAAG+TGG - tig0025315:38814-38833 None:intergenic 60.0%
! GTTTAGAGCGGAGGGAGAGG+AGG - tig0025315:38828-38847 None:intergenic 60.0%
CTACCCCCCATCCCAACACA+TGG + tig0025315:42347-42366 Msa1421870:intron 60.0%
GGTCCATGTGTTGGGATGGG+GGG - tig0025315:42353-42372 None:intergenic 60.0%
GGCAAATCCCACGTTGGTCC+TGG + tig0025315:44977-44996 Msa1421870:CDS 60.0%
GTGAGGAAGTGGAGGGAGGG+AGG - tig0025315:38803-38822 None:intergenic 65.0%
GGGAGTGAGGAAGTGGAGGG+AGG - tig0025315:38807-38826 None:intergenic 65.0%
CGGAGGGAGAGGAGGGAGTG+AGG - tig0025315:38820-38839 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0025315 gene 38648 47709 38648 ID=Msa1421870;Name=Msa1421870
tig0025315 mRNA 38648 47709 38648 ID=Msa1421870-mRNA-1;Parent=Msa1421870;Name=Msa1421870-mRNA-1;_AED=0.09;_eAED=0.09;_QI=139|0.93|0.81|1|0.86|0.93|16|519|887
tig0025315 exon 38648 38889 38648 ID=Msa1421870-mRNA-1:exon:2274;Parent=Msa1421870-mRNA-1
tig0025315 exon 39013 39186 39013 ID=Msa1421870-mRNA-1:exon:2275;Parent=Msa1421870-mRNA-1
tig0025315 exon 39500 39660 39500 ID=Msa1421870-mRNA-1:exon:2276;Parent=Msa1421870-mRNA-1
tig0025315 exon 40617 40673 40617 ID=Msa1421870-mRNA-1:exon:2277;Parent=Msa1421870-mRNA-1
tig0025315 exon 40948 41301 40948 ID=Msa1421870-mRNA-1:exon:2278;Parent=Msa1421870-mRNA-1
tig0025315 exon 41900 42082 41900 ID=Msa1421870-mRNA-1:exon:2279;Parent=Msa1421870-mRNA-1
tig0025315 exon 42187 42267 42187 ID=Msa1421870-mRNA-1:exon:2280;Parent=Msa1421870-mRNA-1
tig0025315 exon 43081 43146 43081 ID=Msa1421870-mRNA-1:exon:2281;Parent=Msa1421870-mRNA-1
tig0025315 exon 43246 43338 43246 ID=Msa1421870-mRNA-1:exon:2282;Parent=Msa1421870-mRNA-1
tig0025315 exon 43539 43664 43539 ID=Msa1421870-mRNA-1:exon:2283;Parent=Msa1421870-mRNA-1
tig0025315 exon 44090 44203 44090 ID=Msa1421870-mRNA-1:exon:2284;Parent=Msa1421870-mRNA-1
tig0025315 exon 44311 44406 44311 ID=Msa1421870-mRNA-1:exon:2285;Parent=Msa1421870-mRNA-1
tig0025315 exon 44495 44592 44495 ID=Msa1421870-mRNA-1:exon:2286;Parent=Msa1421870-mRNA-1
tig0025315 exon 44670 45070 44670 ID=Msa1421870-mRNA-1:exon:2287;Parent=Msa1421870-mRNA-1
tig0025315 exon 45783 46243 45783 ID=Msa1421870-mRNA-1:exon:2288;Parent=Msa1421870-mRNA-1
tig0025315 exon 47095 47709 47095 ID=Msa1421870-mRNA-1:exon:2289;Parent=Msa1421870-mRNA-1
tig0025315 five_prime_UTR 38648 38786 38648 ID=Msa1421870-mRNA-1:five_prime_utr;Parent=Msa1421870-mRNA-1
tig0025315 CDS 38787 38889 38787 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 39013 39186 39013 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 39500 39660 39500 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 40617 40673 40617 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 40948 41301 40948 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 41900 42082 41900 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 42187 42267 42187 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 43081 43146 43081 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 43246 43338 43246 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 43539 43664 43539 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 44090 44203 44090 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 44311 44406 44311 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 44495 44592 44495 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 44670 45070 44670 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 45783 46243 45783 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 CDS 47095 47190 47095 ID=Msa1421870-mRNA-1:cds;Parent=Msa1421870-mRNA-1
tig0025315 three_prime_UTR 47191 47709 47191 ID=Msa1421870-mRNA-1:three_prime_utr;Parent=Msa1421870-mRNA-1
Gene Sequence

>Msa1421870

ATGGCTACTCTCACCTCCCTCCCTCCACTTCCTCACTCCCTCCTCTCCCTCCGCTCTAAACCAACCAGACTCTCCGTTTCAGCTTCAACACTCTCAGCCTCAGGAAATGATGGATCTAATTCTAGAGTACCACACAAAAGAAGGAGAAGAATTGAAGGTCCAAGAAAAAGTATGGAAGATTCTGTTCAACGTAGGATGGAGCAATTTTATGAAGGAAATGATGGACCGCCATTACGTGTTCTTCCTATTGGTGGTTTGGGTGAAATTGGAATGAATTTAATTTTTGTATGTATGCATTTGGTGCGATTTTTCAGCTATGATGACCTTGGAGTACAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAAGATCATATCGGTGCGTTGCCTTGGGTCATCCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGCATTTTCCTTACATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTCGCTGGGCCATTTGAGATAGAACCAATCAGGGTGACTCATTCTATTCCTGACTGTTGTGGACTAGTTCTTCGTTGTTCTGATGGAACTATTCTTCACACTGGGGATTGGAAGGTCAGAATTTTACTTTTAATTCTCAGTGCATTGTACCTTTCATTTACCTTGAATCTCCTGTTGCTGAAAAGGTTGATTCATCAGATTGACGAGACACCACTTGATGGGAAAGTTTTTGATCGGGAGGGTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTGCTCTCACCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGATTCATTATTGAGGCACATTTCAGCTTCAAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATCTACATCGGATTGGAAGTGTCAAAGCTGCTGCCGATTTAACTGGGAGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGACCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACTGGCTCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTTTGGAAGTAGCCATGCTTTCAAACTTACCAAGGAAGATATTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCCCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGAAATGAAAACTTACACACATCTGGACATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATTGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGGCATACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTGAGAAATAGAAGGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAAAATTTACAGTTGAAATATAGTGATGGTGACAAAGCATTTGGTACATCCGGTGAACTCTTCCTTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGATTAGCATGGAAATATTTCGCCCTAAAAATTTAGAAAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGTCTATGGCTGGACAAAGGGAAGCTGTTAGATGCACTATATAAAGCTGCTCATGCAGCTCTTTCTAGCTGTCCCGTCAAAAGTCCACTGGCTCACATGGAAAGAACTGTGTCGGAGATGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCCGAAGTAATTGCCATTGCCATAGAAAATCCTGGAGCAGTTTTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCACGTTGGTCCTGGAATATCAACATTTAGAAGATCCGTGGATGAACATAAAAAGGAAAACCAGTCCAGCACACTGCAAACAAGAGATGATGGCATTGACACAGAAGGACTATTACTTGAGAAAGAGACCACTACAACTGGAGCTGAAGGCGATTTATCTGATTCAGGGGAATCGGATGAATTTTGGAAGCCATTCATTGCATCATCAGTTGAGAAATCAATCAAAGCAAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCAAATATAAAGCAAGATGATTCTGAAGACATAGATGAAGCCAAGTCTGAAGAAATGTCTGATGCTGAGCCAGAGTCTCCAAAATCAGTAAAGAAAAATAAATGGAAAACCGAGGAAGTCAAGAAGCTGATTGATTTGCGGAGTGACCTCCGTGACAGATTTAAAGTTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAATGCAAATCTTTGTGGACATCTTTGGCACTTAAATATGAGGAGATCAAGAACGGGAAAGATAGCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAGGATATTGTCTAGCGATGAAACACCGGCAACAAATTGA
Protein sequence

>Msa1421870

MATLTSLPPLPHSLLSLRSKPTRLSVSASTLSASGNDGSNSRVPHKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNLIFVCMHLVRFFSYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLTSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKVRILLLILSALYLSFTLNLLLLKRLIHQIDETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMNRISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERMRIALDGIIVISMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVKSPLAHMERTVSEMLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSHVGPGISTFRRSVDEHKKENQSSTLQTRDDGIDTEGLLLEKETTTTGAEGDLSDSGESDEFWKPFIASSVEKSIKANNGYVSRKEHKSNIKQDDSEDIDEAKSEEMSDAEPESPKSVKKNKWKTEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPATN*