Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076030 | XP_013449734.1 | 97.594 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 0.0 | 739 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076030 | sp|Q8H1F6|DGP3_ARATH | 62.500 | 368 | 120 | 5 | 24 | 373 | 4 | 371 | 2.13e-164 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076030 | A0A072U235 | 97.594 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 0.0 | 739 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040420 | Msa1076030 | 0.817636 | 2.975059e-52 | -8.615850e-47 |
| Msa0044320 | Msa1076030 | 0.810743 | 9.904998e-51 | -8.615850e-47 |
| Msa0070740 | Msa1076030 | 0.821043 | 4.980231e-53 | -8.615850e-47 |
| Msa0679560 | Msa1076030 | 0.800187 | 1.620844e-48 | -8.615850e-47 |
| Msa0791120 | Msa1076030 | 0.820009 | 8.600328e-53 | -8.615850e-47 |
| Msa0797010 | Msa1076030 | 0.816970 | 4.201683e-52 | -8.615850e-47 |
| Msa0143280 | Msa1076030 | 0.808850 | 2.528499e-50 | -8.615850e-47 |
| Msa0175800 | Msa1076030 | 0.811407 | 7.110767e-51 | -8.615850e-47 |
| Msa0224880 | Msa1076030 | -0.812024 | 5.219343e-51 | -8.615850e-47 |
| Msa0985040 | Msa1076030 | 0.805025 | 1.628677e-49 | -8.615850e-47 |
| Msa1035640 | Msa1076030 | 0.838627 | 2.569897e-57 | -8.615850e-47 |
| Msa1035790 | Msa1076030 | 0.803792 | 2.944033e-49 | -8.615850e-47 |
| Msa1076030 | Msa1081710 | 0.801377 | 9.265255e-49 | -8.615850e-47 |
| Msa1076030 | Msa1113280 | 0.800011 | 1.759998e-48 | -8.615850e-47 |
| Msa1076030 | Msa1116850 | 0.825553 | 4.403077e-54 | -8.615850e-47 |
| Msa1076030 | Msa1125450 | 0.820221 | 7.689947e-53 | -8.615850e-47 |
| Msa1076030 | Msa1164570 | 0.805445 | 1.330116e-49 | -8.615850e-47 |
| Msa1076030 | Msa1299940 | 0.813364 | 2.656818e-51 | -8.615850e-47 |
| Msa1076030 | Msa1311150 | 0.800417 | 1.455439e-48 | -8.615850e-47 |
| Msa1076030 | Msa1328600 | 0.804480 | 2.117307e-49 | -8.615850e-47 |
| Msa1076030 | Msa1363560 | 0.827349 | 1.643511e-54 | -8.615850e-47 |
| Msa1076030 | Msa1386250 | 0.817526 | 3.150191e-52 | -8.615850e-47 |
| Msa0241580 | Msa1076030 | 0.801703 | 7.945652e-49 | -8.615850e-47 |
| Msa0541220 | Msa1076030 | 0.813020 | 3.162094e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076030 | MtrunA17_Chr7g0259841 | 97.594 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 0.0 | 739 |
| Msa1076030 | MtrunA17_Chr7g0257311 | 30.222 | 225 | 137 | 5 | 98 | 309 | 24 | 241 | 2.50e-23 | 100 |
| Msa1076030 | MtrunA17_Chr4g0042571 | 26.354 | 277 | 170 | 9 | 111 | 374 | 198 | 453 | 6.70e-16 | 79.3 |
| Msa1076030 | MtrunA17_Chr2g0317811 | 25.979 | 281 | 166 | 9 | 111 | 374 | 206 | 461 | 1.20e-15 | 78.6 |
| Msa1076030 | MtrunA17_Chr1g0170031 | 29.756 | 205 | 122 | 5 | 120 | 304 | 144 | 346 | 9.52e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076030 | AT4G02790.1 | 62.500 | 368 | 120 | 5 | 24 | 373 | 4 | 371 | 2.17e-165 | 467 |
| Msa1076030 | AT2G41670.1 | 31.718 | 227 | 131 | 5 | 98 | 309 | 26 | 243 | 5.97e-26 | 107 |
| Msa1076030 | AT3G07050.1 | 29.897 | 291 | 168 | 9 | 110 | 374 | 128 | 408 | 8.21e-20 | 91.7 |
| Msa1076030 | AT4G10650.1 | 28.095 | 210 | 129 | 7 | 99 | 290 | 27 | 232 | 5.60e-14 | 73.2 |
| Msa1076030 | AT1G52980.1 | 26.007 | 273 | 158 | 10 | 111 | 364 | 208 | 455 | 1.19e-13 | 72.8 |
Find 103 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCAATGTTGTAGATTAT+TGG | 0.166115 | 7_2:+74431050 | Msa1076030:intron |
| ATTGGTGGAGATAGAGAATT+TGG | 0.206923 | 7_2:-74430558 | None:intergenic |
| CATCATCATCATCTTGCTTA+TGG | 0.251466 | 7_2:+74430532 | Msa1076030:CDS |
| ATGAAAGGTGGGTTCGATTT+GGG | 0.264909 | 7_2:+74434109 | Msa1076030:intron |
| ACTCCTGGCCTTGGAGCTGC+TGG | 0.275454 | 7_2:-74433210 | None:intergenic |
| AGCTTCAGAGTCTTGCTTCT+TGG | 0.276638 | 7_2:-74434783 | None:intergenic |
| GGTATTGGACAGTGGTTTCC+TGG | 0.286100 | 7_2:+74431250 | Msa1076030:intron |
| TATGAAAGGTGGGTTCGATT+TGG | 0.308400 | 7_2:+74434108 | Msa1076030:intron |
| AATTGTGGAGAAATTGAAAT+TGG | 0.308735 | 7_2:-74430576 | None:intergenic |
| GAGGGACTGGGACCGATCTT+TGG | 0.309126 | 7_2:+74431099 | Msa1076030:CDS |
| TGGGAAAGATCTTGAGTTGC+TGG | 0.317900 | 7_2:+74434128 | Msa1076030:CDS |
| ATTGGCAACAACACATTTGA+TGG | 0.320305 | 7_2:+74431068 | Msa1076030:CDS |
| ATCTCAATCTCCCACCATTC+AGG | 0.333290 | 7_2:+74430659 | Msa1076030:CDS |
| CTTGAGTTGCTGGACTCTCC+TGG | 0.351077 | 7_2:+74434138 | Msa1076030:CDS |
| ACACTATAATAATGTTAGTA+TGG | 0.352371 | 7_2:-74435059 | None:intergenic |
| CTTGCGCTTCATTTGTTCAA+TGG | 0.362304 | 7_2:+74434659 | Msa1076030:CDS |
| TAGGTTTGGTTGGACTTCAT+TGG | 0.373097 | 7_2:+74434730 | Msa1076030:CDS |
| CTGCTAATTCCTTTGCTAAC+CGG | 0.374309 | 7_2:-74432348 | None:intergenic |
| GTTGATGGATGTTGTTATAG+AGG | 0.386526 | 7_2:+74431315 | Msa1076030:CDS |
| GTCTTCTCCAATGGGCAGCT+TGG | 0.417848 | 7_2:+74432213 | Msa1076030:CDS |
| CAAGGAACAACTTAAGTTGA+TGG | 0.420000 | 7_2:+74431300 | Msa1076030:CDS |
| CTCCAATGGGCAGCTTGGAA+TGG | 0.425085 | 7_2:+74432218 | Msa1076030:CDS |
| GATGGTTCCGAAGGAGGGAC+TGG | 0.425895 | 7_2:+74431086 | Msa1076030:CDS |
| GGAGATTGAGATTGGAGGGT+TGG | 0.441330 | 7_2:-74430648 | None:intergenic |
| TAGGTTCGAGCTGGAATAGT+TGG | 0.444220 | 7_2:+74433129 | Msa1076030:intron |
| GAACTTTGTATGAAGATTTG+AGG | 0.444534 | 7_2:+74434895 | Msa1076030:three_prime_UTR |
| CTCTCCAATGTCATCACATA+TGG | 0.452328 | 7_2:-74434208 | None:intergenic |
| CAGCTGATGTAAATGTTAAA+CGG | 0.455115 | 7_2:+74432368 | Msa1076030:CDS |
| ATCGGTCCCAGTCCCTCCTT+CGG | 0.468176 | 7_2:-74431093 | None:intergenic |
| TGCCCAGCAGCTCCAAGGCC+AGG | 0.470383 | 7_2:+74433207 | Msa1076030:CDS |
| AACTGCAGATCGAAATGCTT+GGG | 0.470581 | 7_2:+74432158 | Msa1076030:CDS |
| CTCAAATCTCTTGTAACTCC+TGG | 0.470935 | 7_2:-74433225 | None:intergenic |
| ACATTCTTCTCTTTAACAAA+CGG | 0.471895 | 7_2:-74433185 | None:intergenic |
| TTATTCCCACCCGCAGTAGC+AGG | 0.476643 | 7_2:+74430598 | Msa1076030:CDS |
| TTAGAAAAGGTAGGTTTGGT+TGG | 0.479606 | 7_2:+74434720 | Msa1076030:CDS |
| TCATATTGCAAAAGCAGAAA+AGG | 0.487875 | 7_2:+74431273 | Msa1076030:CDS |
| CAAAGGACTACTTCCTCGTC+CGG | 0.491033 | 7_2:+74432396 | Msa1076030:CDS |
| ACAAAGGTTGTCTTCTCCAA+TGG | 0.491090 | 7_2:+74432204 | Msa1076030:CDS |
| CTCCTGGCCTTGGAGCTGCT+GGG | 0.493561 | 7_2:-74433209 | None:intergenic |
| CGGACGAGGAAGTAGTCCTT+TGG | 0.500629 | 7_2:-74432395 | None:intergenic |
| GAATGGTGGGAGATTGAGAT+TGG | 0.500709 | 7_2:-74430656 | None:intergenic |
| ATGGTTCCGAAGGAGGGACT+GGG | 0.508412 | 7_2:+74431087 | Msa1076030:CDS |
| AACCATTCCAAGCTGCCCAT+TGG | 0.512603 | 7_2:-74432220 | None:intergenic |
| TTGACACTGATCTTTATCAC+TGG | 0.513007 | 7_2:+74431129 | Msa1076030:CDS |
| CAAAGGTTGTCTTCTCCAAT+GGG | 0.513498 | 7_2:+74432205 | Msa1076030:CDS |
| TGAGTTCTGTAGTCTGCACC+TGG | 0.514603 | 7_2:-74434832 | None:intergenic |
| TTGAGTTGCTGGACTCTCCT+GGG | 0.515009 | 7_2:+74434139 | Msa1076030:CDS |
| CAGGAGTTACAAGAGATTTG+AGG | 0.515630 | 7_2:+74433226 | Msa1076030:CDS |
| TCTCTTGTAACTCCTGGCCT+TGG | 0.519921 | 7_2:-74433219 | None:intergenic |
| TTGTAGATGGATCTATGGCT+TGG | 0.521384 | 7_2:+74432090 | Msa1076030:intron |
| AGGTTCGAGCTGGAATAGTT+GGG | 0.525535 | 7_2:+74433130 | Msa1076030:intron |
| GACTGGTCACTGATTCGCAT+TGG | 0.525801 | 7_2:-74434168 | None:intergenic |
| GGAGAACCTGCTACTGCGGG+TGG | 0.532796 | 7_2:-74430604 | None:intergenic |
| TGTGGAGAAATTGAAATTGG+TGG | 0.533927 | 7_2:-74430573 | None:intergenic |
| CATTTGATGGTTCCGAAGGA+GGG | 0.543043 | 7_2:+74431081 | Msa1076030:CDS |
| TTGTTATAGAGGTACGAGAC+GGG | 0.546757 | 7_2:+74431326 | Msa1076030:CDS |
| TGGTGGGAGATTGAGATTGG+AGG | 0.546785 | 7_2:-74430653 | None:intergenic |
| TGATGATACATACCTACTGT+TGG | 0.554845 | 7_2:-74434288 | None:intergenic |
| CTGCGGGTGGGAATAAATTG+TGG | 0.555305 | 7_2:-74430591 | None:intergenic |
| AAGTGGAGAACCTGCTACTG+CGG | 0.555716 | 7_2:-74430608 | None:intergenic |
| AAATTACGCTAGAGAAATCC+AGG | 0.558346 | 7_2:+74434814 | Msa1076030:three_prime_UTR |
| TTCTAAAATCTGACAGGACA+CGG | 0.558450 | 7_2:-74434703 | None:intergenic |
| AATAGTTGGGTACCCTAATG+TGG | 0.558464 | 7_2:+74433143 | Msa1076030:CDS |
| ACTTACCTGTGGATGACTTG+TGG | 0.559160 | 7_2:-74431362 | None:intergenic |
| ATTCGCATTGGAAGTATCCC+AGG | 0.560318 | 7_2:-74434156 | None:intergenic |
| TGATATACTCCGACTGTGAA+TGG | 0.561974 | 7_2:+74434866 | Msa1076030:three_prime_UTR |
| GGTGGGAGATTGAGATTGGA+GGG | 0.562781 | 7_2:-74430652 | None:intergenic |
| CAACTGCAGATCGAAATGCT+TGG | 0.565332 | 7_2:+74432157 | Msa1076030:CDS |
| ACATTTGATGGTTCCGAAGG+AGG | 0.568118 | 7_2:+74431080 | Msa1076030:CDS |
| CACATACTAAATACCTGCAC+AGG | 0.571976 | 7_2:-74431167 | None:intergenic |
| TAGAAGCAACCTACCGGACG+AGG | 0.573378 | 7_2:-74432409 | None:intergenic |
| AGGGTTGGTGTGGCAGCGAG+AGG | 0.574193 | 7_2:-74430633 | None:intergenic |
| GTCAAGACCAGTCCAAAGAT+CGG | 0.574666 | 7_2:-74431111 | None:intergenic |
| ACTATTGTATAGGTTCGAGC+TGG | 0.578842 | 7_2:+74433120 | Msa1076030:intron |
| GTCGGAGTATATCAGCATGC+AGG | 0.579879 | 7_2:-74434857 | None:intergenic |
| TTGAGATTGGAGGGTTGGTG+TGG | 0.584151 | 7_2:-74430643 | None:intergenic |
| AGTGGAGAACCTGCTACTGC+GGG | 0.585138 | 7_2:-74430607 | None:intergenic |
| AACACATTTGATGGTTCCGA+AGG | 0.589714 | 7_2:+74431077 | Msa1076030:CDS |
| AAAAGCAGAAAAGGAACTCA+AGG | 0.594084 | 7_2:+74431282 | Msa1076030:CDS |
| GAATGTGCCCAGCAGCTCCA+AGG | 0.594202 | 7_2:+74433202 | Msa1076030:CDS |
| AGGGCACATTGAAGCTAGGC+CGG | 0.597091 | 7_2:+74432329 | Msa1076030:intron |
| CTTACAAAACTTCCAACAGT+AGG | 0.597306 | 7_2:+74434276 | Msa1076030:CDS |
| AATGTTAAACGGAGAGCCAA+AGG | 0.598690 | 7_2:+74432379 | Msa1076030:CDS |
| TTCTTGACACCATTCACAGT+CGG | 0.602537 | 7_2:-74434875 | None:intergenic |
| GTACAGGGCACATTGAAGCT+AGG | 0.604959 | 7_2:+74432325 | Msa1076030:intron |
| GTTGTCCACAAGTCATCCAC+AGG | 0.607084 | 7_2:+74431357 | Msa1076030:CDS |
| GAAGCTAGGCCGGTTAGCAA+AGG | 0.608408 | 7_2:+74432339 | Msa1076030:CDS |
| ACTGGGACCGATCTTTGGAC+TGG | 0.609653 | 7_2:+74431104 | Msa1076030:CDS |
| TGATCTTTATCACTGGACAA+AGG | 0.621272 | 7_2:+74431136 | Msa1076030:CDS |
| CTTGCCATATGTGATGACAT+TGG | 0.632886 | 7_2:+74434204 | Msa1076030:CDS |
| TTTCGTGTAGACAGTGAATG+TGG | 0.640512 | 7_2:+74434441 | Msa1076030:CDS |
| ATAGTTGGGTACCCTAATGT+GGG | 0.643817 | 7_2:+74433144 | Msa1076030:CDS |
| TGTGGCAGCGAGAGGTGAAG+TGG | 0.645729 | 7_2:-74430625 | None:intergenic |
| GAGAACCTGCTACTGCGGGT+GGG | 0.654778 | 7_2:-74430603 | None:intergenic |
| AACATCTGACTTCACCTAGG+TGG | 0.671078 | 7_2:-74434758 | None:intergenic |
| GCAAACATCTGACTTCACCT+AGG | 0.683711 | 7_2:-74434761 | None:intergenic |
| AGCACTAGCAGCAATAAACA+TGG | 0.690155 | 7_2:+74430476 | Msa1076030:exon |
| CTTCATTGGAGAGACCACCT+AGG | 0.694063 | 7_2:+74434744 | Msa1076030:CDS |
| TGGAGAGAGGTCTTATGATG+TGG | 0.703310 | 7_2:+74434224 | Msa1076030:CDS |
| TTATAGAGGTACGAGACGGG+CGG | 0.703873 | 7_2:+74431329 | Msa1076030:CDS |
| TATGTGATGACATTGGAGAG+AGG | 0.708423 | 7_2:+74434211 | Msa1076030:CDS |
| TGTGGATGACTTGTGGACAA+CGG | 0.717355 | 7_2:-74431355 | None:intergenic |
| GTTGTTATAGAGGTACGAGA+CGG | 0.721407 | 7_2:+74431325 | Msa1076030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATAAAATAAAATT+AGG | - | chr7_2:74434497-74434516 | None:intergenic | 0.0% |
| !!! | GTTTTTTGATATAAATTTAA+GGG | - | chr7_2:74430440-74430459 | None:intergenic | 10.0% |
| !!! | ATATTTTTTAAACATTGAAT+TGG | - | chr7_2:74431977-74431996 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATAATCACAAT+TGG | - | chr7_2:74432446-74432465 | None:intergenic | 10.0% |
| !!! | ATTTCTTATTTACAAAATAA+AGG | + | chr7_2:74432780-74432799 | Msa1076030:intron | 10.0% |
| !! | AATAAATAAAATACTAAAGA+TGG | - | chr7_2:74433730-74433749 | None:intergenic | 10.0% |
| !! | TATATAAAATAAAATTAGGA+AGG | - | chr7_2:74434493-74434512 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+TGG | - | chr7_2:74433442-74433461 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433442-74433461 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433442-74433461 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433442-74433461 | None:intergenic | 100.0% |
| !!! | CGTTTTTTGATATAAATTTA+AGG | - | chr7_2:74430441-74430460 | None:intergenic | 15.0% |
| !!! | AAGAAATAACTTATTTTTGT+AGG | + | chr7_2:74432551-74432570 | Msa1076030:intron | 15.0% |
| !!! | AGAAATAACTTATTTTTGTA+GGG | + | chr7_2:74432552-74432571 | Msa1076030:intron | 15.0% |
| !!! | AATGATTTGTAAACAATTAA+AGG | - | chr7_2:74433032-74433051 | None:intergenic | 15.0% |
| !! | AAAACATCAAAAAATTTGAA+TGG | + | chr7_2:74433485-74433504 | Msa1076030:intron | 15.0% |
| !! | TTGCAATTAATCAATTTATT+TGG | + | chr7_2:74433671-74433690 | Msa1076030:intron | 15.0% |
| !!! | GCTAGTATTTTTTTTATAAT+TGG | - | chr7_2:74433808-74433827 | None:intergenic | 15.0% |
| !!! | TTTTGAAAATTTAGTTTCTA+AGG | + | chr7_2:74433890-74433909 | Msa1076030:intron | 15.0% |
| !!! | TCTTATTTCATTAATATGAA+AGG | + | chr7_2:74434094-74434113 | Msa1076030:intron | 15.0% |
| !!! | CTTCAATCTAAAAGATTTTA+CGG | + | chr7_2:74430333-74430352 | Msa1076030:five_prime_UTR | 20.0% |
| !!! | AACACATGAAATTCAATTTT+GGG | - | chr7_2:74430688-74430707 | None:intergenic | 20.0% |
| !!! | ATAAAAAAGTTTTACACTGT+CGG | + | chr7_2:74430860-74430879 | Msa1076030:intron | 20.0% |
| !! | CAAAAAACAGAACTTAAATT+AGG | - | chr7_2:74430902-74430921 | None:intergenic | 20.0% |
| !!! | CTAATTTAAGTTCTGTTTTT+TGG | + | chr7_2:74430900-74430919 | Msa1076030:intron | 20.0% |
| !! | AAATAATAATATTACCGTGA+CGG | - | chr7_2:74430968-74430987 | None:intergenic | 20.0% |
| !! | TAACATTGCTAATAATCTAA+CGG | - | chr7_2:74431013-74431032 | None:intergenic | 20.0% |
| !! | ATGATAAACAATTGTTGAAT+AGG | - | chr7_2:74431763-74431782 | None:intergenic | 20.0% |
| !! | TACTTATGAAACAAATATTG+TGG | - | chr7_2:74431942-74431961 | None:intergenic | 20.0% |
| !! | CAACTTAATGAAAAATTAAG+AGG | - | chr7_2:74432058-74432077 | None:intergenic | 20.0% |
| !!! | TGGTAATAAAAAGAGAATTT+TGG | + | chr7_2:74432110-74432129 | Msa1076030:CDS | 20.0% |
| !! | TATTATCATAAAATTAGCAC+AGG | - | chr7_2:74432481-74432500 | None:intergenic | 20.0% |
| !!! | TGTGCTAATTTTATGATAAT+AGG | + | chr7_2:74432480-74432499 | Msa1076030:intron | 20.0% |
| !! | ACATTCATAAAACAATGTTA+AGG | - | chr7_2:74432692-74432711 | None:intergenic | 20.0% |
| !! | TTCAAAATCTAATATTAGCT+GGG | - | chr7_2:74432857-74432876 | None:intergenic | 20.0% |
| !! | ATTCAAAATCTAATATTAGC+TGG | - | chr7_2:74432858-74432877 | None:intergenic | 20.0% |
| !! | AACATTAACAAAATAACAGT+TGG | - | chr7_2:74432921-74432940 | None:intergenic | 20.0% |
| !!! | ATGTTCATTATTTTGTACTA+TGG | + | chr7_2:74432936-74432955 | Msa1076030:intron | 20.0% |
| !! | ATTTCATGATACTATTGTAT+AGG | + | chr7_2:74433110-74433129 | Msa1076030:intron | 20.0% |
| !! | TTTATTTCCTTAAATATCTC+CGG | + | chr7_2:74433261-74433280 | Msa1076030:intron | 20.0% |
| !!! | CATGTTTAAAACAAAAAACA+GGG | - | chr7_2:74433379-74433398 | None:intergenic | 20.0% |
| !! | TATTTCATTAATATGAAAGG+TGG | + | chr7_2:74434097-74434116 | Msa1076030:intron | 20.0% |
| !! | ATTTCATTAATATGAAAGGT+GGG | + | chr7_2:74434098-74434117 | Msa1076030:intron | 20.0% |
| !! | TAACTAAAATATGATTCCAA+GGG | - | chr7_2:74434324-74434343 | None:intergenic | 20.0% |
| !! | TTAACTAAAATATGATTCCA+AGG | - | chr7_2:74434325-74434344 | None:intergenic | 20.0% |
| !!! | ATTGCTTCAAATATTTTGTT+TGG | - | chr7_2:74434925-74434944 | None:intergenic | 20.0% |
| !!! | AGTACCATGTAATTATTTTT+TGG | + | chr7_2:74434962-74434981 | Msa1076030:three_prime_UTR | 20.0% |
| !! | ACACTATAATAATGTTAGTA+TGG | - | chr7_2:74435062-74435081 | None:intergenic | 20.0% |
| ! | AATTGTGGAGAAATTGAAAT+TGG | - | chr7_2:74430579-74430598 | None:intergenic | 25.0% |
| !! | GAACACATGAAATTCAATTT+TGG | - | chr7_2:74430689-74430708 | None:intergenic | 25.0% |
| !! | AAACAGGAAATGAACATTTT+TGG | - | chr7_2:74431393-74431412 | None:intergenic | 25.0% |
| !! | CATAGAATAAAGGTATAAAC+AGG | - | chr7_2:74431409-74431428 | None:intergenic | 25.0% |
| ! | AAAATGTACCAATCAGATAA+CGG | - | chr7_2:74431704-74431723 | None:intergenic | 25.0% |
| ! | TTATAGATAGCTTATGAAGA+TGG | - | chr7_2:74431831-74431850 | None:intergenic | 25.0% |
| ! | TTCGAAAAAACTTACAAAAG+TGG | - | chr7_2:74431855-74431874 | None:intergenic | 25.0% |
| !! | CTTTTCTATATCCAAGAATA+AGG | + | chr7_2:74432507-74432526 | Msa1076030:intron | 25.0% |
| ! | TAAGGAAACATATCGTTTAT+TGG | + | chr7_2:74432525-74432544 | Msa1076030:intron | 25.0% |
| !!! | CAACTCAATTTTGACTTAAA+AGG | + | chr7_2:74432590-74432609 | Msa1076030:intron | 25.0% |
| ! | ACATTCTTCTCTTTAACAAA+CGG | - | chr7_2:74433188-74433207 | None:intergenic | 25.0% |
| !! | ATTAGAAATGTTTTCGTTTC+CGG | - | chr7_2:74433283-74433302 | None:intergenic | 25.0% |
| !! | GCATGTTTAAAACAAAAAAC+AGG | - | chr7_2:74433380-74433399 | None:intergenic | 25.0% |
| ! | AAAACAAAATAAACCAGCAT+TGG | - | chr7_2:74433610-74433629 | None:intergenic | 25.0% |
| !!! | CTGGTTTATTTTGTTTTAAG+AGG | + | chr7_2:74433613-74433632 | Msa1076030:intron | 25.0% |
| ! | GAAAAATGTATAATCGAGTT+AGG | + | chr7_2:74433768-74433787 | Msa1076030:intron | 25.0% |
| !! | TAACTATGATAAACTTTTGC+AGG | - | chr7_2:74433992-74434011 | None:intergenic | 25.0% |
| ! | AAGACAATAAATCATGTACT+CGG | - | chr7_2:74434078-74434097 | None:intergenic | 25.0% |
| ! | ATAGATAGATTAAGAGACAT+TGG | - | chr7_2:74434580-74434599 | None:intergenic | 25.0% |
| ! | TTCTCTATGAATCTACAATT+AGG | - | chr7_2:74434638-74434657 | None:intergenic | 25.0% |
| ! | CAGACCAAAAAATAATTACA+TGG | - | chr7_2:74434969-74434988 | None:intergenic | 25.0% |
| !!! | TTCTATAACTTTTTGAGGAA+AGG | - | chr7_2:74435128-74435147 | None:intergenic | 25.0% |
| TTCTATTTGGTCTGAATTGT+GGG | - | chr7_2:74430765-74430784 | None:intergenic | 30.0% | |
| ! | ACATCATGGAGTCTTTTTAT+TGG | + | chr7_2:74430829-74430848 | Msa1076030:intron | 30.0% |
| AAATCTAATATACACCGTCA+CGG | + | chr7_2:74430951-74430970 | Msa1076030:intron | 30.0% | |
| CACTCAATGTTGTAGATTAT+TGG | + | chr7_2:74431050-74431069 | Msa1076030:intron | 30.0% | |
| TCATATTGCAAAAGCAGAAA+AGG | + | chr7_2:74431273-74431292 | Msa1076030:CDS | 30.0% | |
| TTTGAACAAACCGCTATTAT+CGG | - | chr7_2:74431457-74431476 | None:intergenic | 30.0% | |
| !! | CACAAAGTATTGTCAAATAG+TGG | - | chr7_2:74431510-74431529 | None:intergenic | 30.0% |
| ! | TAATTCCCTATCATTGCTTT+TGG | + | chr7_2:74431676-74431695 | Msa1076030:intron | 30.0% |
| ! | ATTGGTACATTTTATCATCC+AGG | + | chr7_2:74431711-74431730 | Msa1076030:intron | 30.0% |
| ! | TTGGTACATTTTATCATCCA+GGG | + | chr7_2:74431712-74431731 | Msa1076030:intron | 30.0% |
| !!! | TTGTAAGTTTTTTCGAACAC+CGG | + | chr7_2:74431858-74431877 | Msa1076030:intron | 30.0% |
| ! | TCTAATAACTAAGCTTTTGC+CGG | - | chr7_2:74431880-74431899 | None:intergenic | 30.0% |
| !! | AGATTTTTCAAACACTCCAT+CGG | + | chr7_2:74431902-74431921 | Msa1076030:intron | 30.0% |
| TGCTTCTTAATACAGTAGTT+AGG | + | chr7_2:74432012-74432031 | Msa1076030:intron | 30.0% | |
| AACAAAGGATCTTGAAAACA+CGG | - | chr7_2:74432280-74432299 | None:intergenic | 30.0% | |
| CAGCTGATGTAAATGTTAAA+CGG | + | chr7_2:74432368-74432387 | Msa1076030:CDS | 30.0% | |
| ATAAAATTAGCACAGGAAAG+CGG | - | chr7_2:74432474-74432493 | None:intergenic | 30.0% | |
| ACGATATGTTTCCTTATTCT+TGG | - | chr7_2:74432521-74432540 | None:intergenic | 30.0% | |
| GTAAATAAGAAATGCAAGAC+AGG | - | chr7_2:74432773-74432792 | None:intergenic | 30.0% | |
| GGTGTTCATGATAACATTAT+GGG | - | chr7_2:74433402-74433421 | None:intergenic | 30.0% | |
| !!! | GGCTTAGGGATTTTATTTTT+CGG | - | chr7_2:74433541-74433560 | None:intergenic | 30.0% |
| !! | AAGTTACATTTTTCGGCTTA+GGG | - | chr7_2:74433555-74433574 | None:intergenic | 30.0% |
| ! | ACCCTAGAAGTTACATTTTT+CGG | - | chr7_2:74433562-74433581 | None:intergenic | 30.0% |
| TGATTAATTGCAACTTACGT+TGG | - | chr7_2:74433664-74433683 | None:intergenic | 30.0% | |
| ! | GTTTTATGTATTCTCAACAG+AGG | + | chr7_2:74433912-74433931 | Msa1076030:intron | 30.0% |
| TCAACAGAGGAAGAATTTAA+CGG | + | chr7_2:74433925-74433944 | Msa1076030:intron | 30.0% | |
| ! | AGTTTTTGAACATTGAGATC+AGG | - | chr7_2:74434364-74434383 | None:intergenic | 30.0% |
| TAGGAAGGAAAAAAAATCAC+TGG | - | chr7_2:74434478-74434497 | None:intergenic | 30.0% | |
| !!! | TACCTTTTCTAAAATCTGAC+AGG | - | chr7_2:74434712-74434731 | None:intergenic | 30.0% |
| !! | TGTCAGATTTTAGAAAAGGT+AGG | + | chr7_2:74434711-74434730 | Msa1076030:CDS | 30.0% |
| !! | GATTTTAGAAAAGGTAGGTT+TGG | + | chr7_2:74434716-74434735 | Msa1076030:CDS | 30.0% |
| GAACTTTGTATGAAGATTTG+AGG | + | chr7_2:74434895-74434914 | Msa1076030:three_prime_UTR | 30.0% | |
| CATCATCATCATCTTGCTTA+TGG | + | chr7_2:74430532-74430551 | Msa1076030:CDS | 35.0% | |
| ATTGGTGGAGATAGAGAATT+TGG | - | chr7_2:74430561-74430580 | None:intergenic | 35.0% | |
| TGTGGAGAAATTGAAATTGG+TGG | - | chr7_2:74430576-74430595 | None:intergenic | 35.0% | |
| !!! | TCAATTTTGGGTTACCTGAA+TGG | - | chr7_2:74430676-74430695 | None:intergenic | 35.0% |
| CACGAATTACACAAGAATGA+AGG | - | chr7_2:74430711-74430730 | None:intergenic | 35.0% | |
| CTTCTATTTGGTCTGAATTG+TGG | - | chr7_2:74430766-74430785 | None:intergenic | 35.0% | |
| CTTACATCCATTGAACATCA+TGG | + | chr7_2:74430815-74430834 | Msa1076030:intron | 35.0% | |
| AAAGACTCCATGATGTTCAA+TGG | - | chr7_2:74430825-74430844 | None:intergenic | 35.0% | |
| ATTGGCAACAACACATTTGA+TGG | + | chr7_2:74431068-74431087 | Msa1076030:CDS | 35.0% | |
| TTGACACTGATCTTTATCAC+TGG | + | chr7_2:74431129-74431148 | Msa1076030:CDS | 35.0% | |
| TGATCTTTATCACTGGACAA+AGG | + | chr7_2:74431136-74431155 | Msa1076030:CDS | 35.0% | |
| TGTGCACTTTATGTGTGTAA+TGG | + | chr7_2:74431186-74431205 | Msa1076030:intron | 35.0% | |
| AAAAGCAGAAAAGGAACTCA+AGG | + | chr7_2:74431282-74431301 | Msa1076030:CDS | 35.0% | |
| !! | CAAGGAACAACTTAAGTTGA+TGG | + | chr7_2:74431300-74431319 | Msa1076030:CDS | 35.0% |
| ! | GTTGATGGATGTTGTTATAG+AGG | + | chr7_2:74431315-74431334 | Msa1076030:CDS | 35.0% |
| !!! | TTTTGGTGTTAACTTACCTG+TGG | - | chr7_2:74431376-74431395 | None:intergenic | 35.0% |
| AACGTCGGTACATAGAATAA+AGG | - | chr7_2:74431419-74431438 | None:intergenic | 35.0% | |
| CAATCCATTAAAGACAACGT+CGG | - | chr7_2:74431434-74431453 | None:intergenic | 35.0% | |
| !! | TAATGGATTGCCGATAATAG+CGG | + | chr7_2:74431444-74431463 | Msa1076030:intron | 35.0% |
| GTCAAATAGTGGCTATAGTA+GGG | - | chr7_2:74431499-74431518 | None:intergenic | 35.0% | |
| TGTCAAATAGTGGCTATAGT+AGG | - | chr7_2:74431500-74431519 | None:intergenic | 35.0% | |
| TTGTGCTAAATTGCGTATTG+TGG | + | chr7_2:74431525-74431544 | Msa1076030:intron | 35.0% | |
| !!! | TTTTGGTTCCGTTATCTGAT+TGG | + | chr7_2:74431693-74431712 | Msa1076030:intron | 35.0% |
| ! | TGGTACATTTTATCATCCAG+GGG | + | chr7_2:74431713-74431732 | Msa1076030:intron | 35.0% |
| ! | AGGTATTGTCGTAGTACAAA+AGG | - | chr7_2:74432038-74432057 | None:intergenic | 35.0% |
| ATAGATCCATCTACAAAAGC+AGG | - | chr7_2:74432086-74432105 | None:intergenic | 35.0% | |
| ! | TGCTTTTGTAGATGGATCTA+TGG | + | chr7_2:74432085-74432104 | Msa1076030:intron | 35.0% |
| ! | TTTTACTAGGCATGGAACAA+AGG | + | chr7_2:74432188-74432207 | Msa1076030:CDS | 35.0% |
| GGATCAGATATGTTGAACAA+AGG | - | chr7_2:74432295-74432314 | None:intergenic | 35.0% | |
| TGATCCTATGCTTTATGTAC+AGG | + | chr7_2:74432309-74432328 | Msa1076030:intron | 35.0% | |
| GATCCTATGCTTTATGTACA+GGG | + | chr7_2:74432310-74432329 | Msa1076030:intron | 35.0% | |
| !! | CTTTTCCATCTCTAGGAATA+AGG | + | chr7_2:74432617-74432636 | Msa1076030:intron | 35.0% |
| CATTTCCTTATTCCTAGAGA+TGG | - | chr7_2:74432625-74432644 | None:intergenic | 35.0% | |
| TTGTACTATGGAAGTAGATG+TGG | + | chr7_2:74432948-74432967 | Msa1076030:intron | 35.0% | |
| ! | GAGATGATTTTCCCACATTA+GGG | - | chr7_2:74433158-74433177 | None:intergenic | 35.0% |
| ! | AGAGATGATTTTCCCACATT+AGG | - | chr7_2:74433159-74433178 | None:intergenic | 35.0% |
| TTCGTTTCCGGAGATATTTA+AGG | - | chr7_2:74433271-74433290 | None:intergenic | 35.0% | |
| GGGTGTTCATGATAACATTA+TGG | - | chr7_2:74433403-74433422 | None:intergenic | 35.0% | |
| !!! | GGGATTTTATTTTTCGGCTT+AGG | - | chr7_2:74433535-74433554 | None:intergenic | 35.0% |
| !! | GAAGTTACATTTTTCGGCTT+AGG | - | chr7_2:74433556-74433575 | None:intergenic | 35.0% |
| AGCCGAAAAATGTAACTTCT+AGG | + | chr7_2:74433557-74433576 | Msa1076030:intron | 35.0% | |
| GCCGAAAAATGTAACTTCTA+GGG | + | chr7_2:74433558-74433577 | Msa1076030:intron | 35.0% | |
| ! | GTTTTTCTTGATCTCAACAG+AGG | + | chr7_2:74433580-74433599 | Msa1076030:intron | 35.0% |
| CATTTCCTGGAATGTTAACT+TGG | - | chr7_2:74433697-74433716 | None:intergenic | 35.0% | |
| TGGAAAACAACAACATTTCC+TGG | - | chr7_2:74433710-74433729 | None:intergenic | 35.0% | |
| ! | TTATTTGGATAGGGAAGCAT+AGG | - | chr7_2:74433855-74433874 | None:intergenic | 35.0% |
| GCTTCCCTATCCAAATAAAA+CGG | + | chr7_2:74433857-74433876 | Msa1076030:intron | 35.0% | |
| CTTACAAAACTTCCAACAGT+AGG | + | chr7_2:74434276-74434295 | Msa1076030:CDS | 35.0% | |
| TGATGATACATACCTACTGT+TGG | - | chr7_2:74434291-74434310 | None:intergenic | 35.0% | |
| !! | TTCTAAAATCTGACAGGACA+CGG | - | chr7_2:74434706-74434725 | None:intergenic | 35.0% |
| !! | GTCCTGTCAGATTTTAGAAA+AGG | + | chr7_2:74434707-74434726 | Msa1076030:CDS | 35.0% |
| ! | TTAGAAAAGGTAGGTTTGGT+TGG | + | chr7_2:74434720-74434739 | Msa1076030:CDS | 35.0% |
| AAATTACGCTAGAGAAATCC+AGG | + | chr7_2:74434814-74434833 | Msa1076030:three_prime_UTR | 35.0% | |
| ATGATGCATACAGAATCCTA+TGG | - | chr7_2:74435026-74435045 | None:intergenic | 35.0% | |
| AGCACTAGCAGCAATAAACA+TGG | + | chr7_2:74430476-74430495 | Msa1076030:exon | 40.0% | |
| !!! | TTTTGGGTTACCTGAATGGT+GGG | - | chr7_2:74430672-74430691 | None:intergenic | 40.0% |
| !!! | ATTTTGGGTTACCTGAATGG+TGG | - | chr7_2:74430673-74430692 | None:intergenic | 40.0% |
| TTGGTCTGAATTGTGGGTTT+GGG | - | chr7_2:74430759-74430778 | None:intergenic | 40.0% | |
| TTTGGTCTGAATTGTGGGTT+TGG | - | chr7_2:74430760-74430779 | None:intergenic | 40.0% | |
| CTGACAGTGCATCTTCTATT+TGG | - | chr7_2:74430778-74430797 | None:intergenic | 40.0% | |
| ! | AACACATTTGATGGTTCCGA+AGG | + | chr7_2:74431077-74431096 | Msa1076030:CDS | 40.0% |
| CACATACTAAATACCTGCAC+AGG | - | chr7_2:74431170-74431189 | None:intergenic | 40.0% | |
| !! | TTTGAGTGCTGATTACTCCT+TGG | + | chr7_2:74431229-74431248 | Msa1076030:intron | 40.0% |
| ! | TGCTGATTACTCCTTGGTAT+TGG | + | chr7_2:74431235-74431254 | Msa1076030:intron | 40.0% |
| !! | TCTGCTTTTGCAATATGACC+AGG | - | chr7_2:74431271-74431290 | None:intergenic | 40.0% |
| ! | GTTGTTATAGAGGTACGAGA+CGG | + | chr7_2:74431325-74431344 | Msa1076030:CDS | 40.0% |
| ! | TTGTTATAGAGGTACGAGAC+GGG | + | chr7_2:74431326-74431345 | Msa1076030:CDS | 40.0% |
| ! | TGTACCGACGTTGTCTTTAA+TGG | + | chr7_2:74431427-74431446 | Msa1076030:intron | 40.0% |
| CTGTGAAATAGCAGCATTTG+TGG | - | chr7_2:74431598-74431617 | None:intergenic | 40.0% | |
| CGGAACCAAAAGCAATGATA+GGG | - | chr7_2:74431684-74431703 | None:intergenic | 40.0% | |
| ACGGAACCAAAAGCAATGAT+AGG | - | chr7_2:74431685-74431704 | None:intergenic | 40.0% | |
| TTTATCATCCAGGGGATGTT+TGG | + | chr7_2:74431721-74431740 | Msa1076030:intron | 40.0% | |
| TTATCATCCAGGGGATGTTT+GGG | + | chr7_2:74431722-74431741 | Msa1076030:intron | 40.0% | |
| GGAAAATGACATAACACCGA+TGG | - | chr7_2:74431921-74431940 | None:intergenic | 40.0% | |
| !! | GTTACTCCTGCTTTTGTAGA+TGG | + | chr7_2:74432077-74432096 | Msa1076030:intron | 40.0% |
| TTGTAGATGGATCTATGGCT+TGG | + | chr7_2:74432090-74432109 | Msa1076030:intron | 40.0% | |
| AACTGCAGATCGAAATGCTT+GGG | + | chr7_2:74432158-74432177 | Msa1076030:CDS | 40.0% | |
| !! | CTTGGGCAGAGTATTTTACT+AGG | + | chr7_2:74432175-74432194 | Msa1076030:CDS | 40.0% |
| !! | GCAGAGTATTTTACTAGGCA+TGG | + | chr7_2:74432180-74432199 | Msa1076030:CDS | 40.0% |
| ACAAAGGTTGTCTTCTCCAA+TGG | + | chr7_2:74432204-74432223 | Msa1076030:CDS | 40.0% | |
| CAAAGGTTGTCTTCTCCAAT+GGG | + | chr7_2:74432205-74432224 | Msa1076030:CDS | 40.0% | |
| GGAGGAGAAAAGATCTTGTT+TGG | - | chr7_2:74432251-74432270 | None:intergenic | 40.0% | |
| CTGCTAATTCCTTTGCTAAC+CGG | - | chr7_2:74432351-74432370 | None:intergenic | 40.0% | |
| AATGTTAAACGGAGAGCCAA+AGG | + | chr7_2:74432379-74432398 | Msa1076030:CDS | 40.0% | |
| AATTGCTAGAAGCAACCTAC+CGG | - | chr7_2:74432418-74432437 | None:intergenic | 40.0% | |
| !! | AGGACTACTTTTCCATCTCT+AGG | + | chr7_2:74432610-74432629 | Msa1076030:intron | 40.0% |
| AAACAATGTTAAGGAGCTGC+AGG | - | chr7_2:74432683-74432702 | None:intergenic | 40.0% | |
| ACTATTGTATAGGTTCGAGC+TGG | + | chr7_2:74433120-74433139 | Msa1076030:intron | 40.0% | |
| AATAGTTGGGTACCCTAATG+TGG | + | chr7_2:74433143-74433162 | Msa1076030:CDS | 40.0% | |
| ATAGTTGGGTACCCTAATGT+GGG | + | chr7_2:74433144-74433163 | Msa1076030:CDS | 40.0% | |
| CTCAAATCTCTTGTAACTCC+TGG | - | chr7_2:74433228-74433247 | None:intergenic | 40.0% | |
| CAGGAGTTACAAGAGATTTG+AGG | + | chr7_2:74433226-74433245 | Msa1076030:CDS | 40.0% | |
| TTAGTTGTGTGTGTGTGTGT+GGG | - | chr7_2:74433467-74433486 | None:intergenic | 40.0% | |
| TTTAGTTGTGTGTGTGTGTG+TGG | - | chr7_2:74433468-74433487 | None:intergenic | 40.0% | |
| ! | AATGGACTTCCAAGTCCTAA+TGG | + | chr7_2:74433503-74433522 | Msa1076030:intron | 40.0% |
| TTTGGCCAAGTTAACATTCC+AGG | + | chr7_2:74433689-74433708 | Msa1076030:intron | 40.0% | |
| ! | CTAGCTGTTCATCAGCTTTT+CGG | + | chr7_2:74433823-74433842 | Msa1076030:intron | 40.0% |
| TCCCTATCCAAATAAAACGG+TGG | + | chr7_2:74433860-74433879 | Msa1076030:intron | 40.0% | |
| !!! | GCCACCGTTTTATTTGGATA+GGG | - | chr7_2:74433864-74433883 | None:intergenic | 40.0% |
| !!! | TGCCACCGTTTTATTTGGAT+AGG | - | chr7_2:74433865-74433884 | None:intergenic | 40.0% |
| !! | GAACTTGCCACCGTTTTATT+TGG | - | chr7_2:74433870-74433889 | None:intergenic | 40.0% |
| TGAGCTCAAGCAAGAAACAA+TGG | + | chr7_2:74434033-74434052 | Msa1076030:intron | 40.0% | |
| ! | TATGAAAGGTGGGTTCGATT+TGG | + | chr7_2:74434108-74434127 | Msa1076030:intron | 40.0% |
| ! | ATGAAAGGTGGGTTCGATTT+GGG | + | chr7_2:74434109-74434128 | Msa1076030:intron | 40.0% |
| !! | CAAGTTTTATAGCTGCTGAC+TGG | - | chr7_2:74434188-74434207 | None:intergenic | 40.0% |
| CTTGCCATATGTGATGACAT+TGG | + | chr7_2:74434204-74434223 | Msa1076030:CDS | 40.0% | |
| CTCTCCAATGTCATCACATA+TGG | - | chr7_2:74434211-74434230 | None:intergenic | 40.0% | |
| TATGTGATGACATTGGAGAG+AGG | + | chr7_2:74434211-74434230 | Msa1076030:CDS | 40.0% | |
| TTTCGTGTAGACAGTGAATG+TGG | + | chr7_2:74434441-74434460 | Msa1076030:CDS | 40.0% | |
| CTTGCGCTTCATTTGTTCAA+TGG | + | chr7_2:74434659-74434678 | Msa1076030:CDS | 40.0% | |
| ! | TAGGTTTGGTTGGACTTCAT+TGG | + | chr7_2:74434730-74434749 | Msa1076030:CDS | 40.0% |
| TGATATACTCCGACTGTGAA+TGG | + | chr7_2:74434866-74434885 | Msa1076030:three_prime_UTR | 40.0% | |
| TTCTTGACACCATTCACAGT+CGG | - | chr7_2:74434878-74434897 | None:intergenic | 40.0% | |
| ! | GTATACAAGTGTTGTGCCAT+AGG | + | chr7_2:74435007-74435026 | Msa1076030:intron | 40.0% |
| !! | ACTTTTTGAGGAAAGGCACA+AGG | - | chr7_2:74435121-74435140 | None:intergenic | 40.0% |
| ! | GAATGGTGGGAGATTGAGAT+TGG | - | chr7_2:74430659-74430678 | None:intergenic | 45.0% |
| ATCTCAATCTCCCACCATTC+AGG | + | chr7_2:74430659-74430678 | Msa1076030:CDS | 45.0% | |
| ! | ACATTTGATGGTTCCGAAGG+AGG | + | chr7_2:74431080-74431099 | Msa1076030:CDS | 45.0% |
| ! | CATTTGATGGTTCCGAAGGA+GGG | + | chr7_2:74431081-74431100 | Msa1076030:CDS | 45.0% |
| GTCAAGACCAGTCCAAAGAT+CGG | - | chr7_2:74431114-74431133 | None:intergenic | 45.0% | |
| ! | AAAGGTTTTACGACCTGTGC+AGG | + | chr7_2:74431154-74431173 | Msa1076030:CDS | 45.0% |
| ! | TACTCCTTGGTATTGGACAG+TGG | + | chr7_2:74431242-74431261 | Msa1076030:intron | 45.0% |
| GAAACCACTGTCCAATACCA+AGG | - | chr7_2:74431249-74431268 | None:intergenic | 45.0% | |
| ! | TGTGGATGACTTGTGGACAA+CGG | - | chr7_2:74431358-74431377 | None:intergenic | 45.0% |
| ACTTACCTGTGGATGACTTG+TGG | - | chr7_2:74431365-74431384 | None:intergenic | 45.0% | |
| ! | TTGATAACCCAAACATCCCC+TGG | - | chr7_2:74431732-74431751 | None:intergenic | 45.0% |
| CAACTGCAGATCGAAATGCT+TGG | + | chr7_2:74432157-74432176 | Msa1076030:CDS | 45.0% | |
| ATCTTGAAAACACGGAGAGG+TGG | - | chr7_2:74432272-74432291 | None:intergenic | 45.0% | |
| AGGATCTTGAAAACACGGAG+AGG | - | chr7_2:74432275-74432294 | None:intergenic | 45.0% | |
| GTGCCCTGTACATAAAGCAT+AGG | - | chr7_2:74432316-74432335 | None:intergenic | 45.0% | |
| TAGGTTCGAGCTGGAATAGT+TGG | + | chr7_2:74433129-74433148 | Msa1076030:intron | 45.0% | |
| AGGTTCGAGCTGGAATAGTT+GGG | + | chr7_2:74433130-74433149 | Msa1076030:intron | 45.0% | |
| TTGTTTCCTGACGCTAGTGT+TGG | + | chr7_2:74433334-74433353 | Msa1076030:intron | 45.0% | |
| TAGTTGTGTGTGTGTGTGTG+GGG | - | chr7_2:74433466-74433485 | None:intergenic | 45.0% | |
| GCTCAAGCAAGAAACAATGG+TGG | + | chr7_2:74434036-74434055 | Msa1076030:intron | 45.0% | |
| ! | TGGGAAAGATCTTGAGTTGC+TGG | + | chr7_2:74434128-74434147 | Msa1076030:CDS | 45.0% |
| !! | ATTCGCATTGGAAGTATCCC+AGG | - | chr7_2:74434159-74434178 | None:intergenic | 45.0% |
| ! | TGGAGAGAGGTCTTATGATG+TGG | + | chr7_2:74434224-74434243 | Msa1076030:CDS | 45.0% |
| TCATCATGACATGCATCCCT+TGG | + | chr7_2:74434305-74434324 | Msa1076030:intron | 45.0% | |
| TCTCAGCCTTTGTTCAATGC+AGG | + | chr7_2:74434390-74434409 | Msa1076030:intron | 45.0% | |
| TCTCGACCTGCATTGAACAA+AGG | - | chr7_2:74434399-74434418 | None:intergenic | 45.0% | |
| AACATCTGACTTCACCTAGG+TGG | - | chr7_2:74434761-74434780 | None:intergenic | 45.0% | |
| GCAAACATCTGACTTCACCT+AGG | - | chr7_2:74434764-74434783 | None:intergenic | 45.0% | |
| AGCTTCAGAGTCTTGCTTCT+TGG | - | chr7_2:74434786-74434805 | None:intergenic | 45.0% | |
| !!! | TTTAGTATTTTATTTATTTT+AGG | + | chr7_2:74433732-74433751 | Msa1076030:intron | 5.0% |
| CTGCGGGTGGGAATAAATTG+TGG | - | chr7_2:74430594-74430613 | None:intergenic | 50.0% | |
| AAGTGGAGAACCTGCTACTG+CGG | - | chr7_2:74430611-74430630 | None:intergenic | 50.0% | |
| !! | TTGAGATTGGAGGGTTGGTG+TGG | - | chr7_2:74430646-74430665 | None:intergenic | 50.0% |
| GGAGATTGAGATTGGAGGGT+TGG | - | chr7_2:74430651-74430670 | None:intergenic | 50.0% | |
| GGTGGGAGATTGAGATTGGA+GGG | - | chr7_2:74430655-74430674 | None:intergenic | 50.0% | |
| TGGTGGGAGATTGAGATTGG+AGG | - | chr7_2:74430656-74430675 | None:intergenic | 50.0% | |
| ! | GGTATTGGACAGTGGTTTCC+TGG | + | chr7_2:74431250-74431269 | Msa1076030:intron | 50.0% |
| ! | TTATAGAGGTACGAGACGGG+CGG | + | chr7_2:74431329-74431348 | Msa1076030:CDS | 50.0% |
| GTTGTCCACAAGTCATCCAC+AGG | + | chr7_2:74431357-74431376 | Msa1076030:CDS | 50.0% | |
| AACCATTCCAAGCTGCCCAT+TGG | - | chr7_2:74432223-74432242 | None:intergenic | 50.0% | |
| AATGGGCAGCTTGGAATGGT+TGG | + | chr7_2:74432222-74432241 | Msa1076030:intron | 50.0% | |
| TTGAAAACACGGAGAGGTGG+AGG | - | chr7_2:74432269-74432288 | None:intergenic | 50.0% | |
| GTACAGGGCACATTGAAGCT+AGG | + | chr7_2:74432325-74432344 | Msa1076030:intron | 50.0% | |
| CAAAGGACTACTTCCTCGTC+CGG | + | chr7_2:74432396-74432415 | Msa1076030:CDS | 50.0% | |
| AGGAGCTGCAGGAAAGTTGT+AGG | - | chr7_2:74432672-74432691 | None:intergenic | 50.0% | |
| TCTCTTGTAACTCCTGGCCT+TGG | - | chr7_2:74433222-74433241 | None:intergenic | 50.0% | |
| ACAGTACCAACACTAGCGTC+AGG | - | chr7_2:74433343-74433362 | None:intergenic | 50.0% | |
| AGTTGTGTGTGTGTGTGTGG+GGG | - | chr7_2:74433465-74433484 | None:intergenic | 50.0% | |
| AGGTTGCGTCCATTAGGACT+TGG | - | chr7_2:74433515-74433534 | None:intergenic | 50.0% | |
| CAACAGAGGAAAGCCAATGC+TGG | + | chr7_2:74433594-74433613 | Msa1076030:intron | 50.0% | |
| ! | TTGAGTTGCTGGACTCTCCT+GGG | + | chr7_2:74434139-74434158 | Msa1076030:CDS | 50.0% |
| !! | GACTGGTCACTGATTCGCAT+TGG | - | chr7_2:74434171-74434190 | None:intergenic | 50.0% |
| CTTCATTGGAGAGACCACCT+AGG | + | chr7_2:74434744-74434763 | Msa1076030:CDS | 50.0% | |
| TGAGTTCTGTAGTCTGCACC+TGG | - | chr7_2:74434835-74434854 | None:intergenic | 50.0% | |
| GTCGGAGTATATCAGCATGC+AGG | - | chr7_2:74434860-74434879 | None:intergenic | 50.0% | |
| TTATTCCCACCCGCAGTAGC+AGG | + | chr7_2:74430598-74430617 | Msa1076030:CDS | 55.0% | |
| AGTGGAGAACCTGCTACTGC+GGG | - | chr7_2:74430610-74430629 | None:intergenic | 55.0% | |
| ATGGTTCCGAAGGAGGGACT+GGG | + | chr7_2:74431087-74431106 | Msa1076030:CDS | 55.0% | |
| ACTGGGACCGATCTTTGGAC+TGG | + | chr7_2:74431104-74431123 | Msa1076030:CDS | 55.0% | |
| GTCTTCTCCAATGGGCAGCT+TGG | + | chr7_2:74432213-74432232 | Msa1076030:CDS | 55.0% | |
| CTCCAATGGGCAGCTTGGAA+TGG | + | chr7_2:74432218-74432237 | Msa1076030:CDS | 55.0% | |
| AGGGCACATTGAAGCTAGGC+CGG | + | chr7_2:74432329-74432348 | Msa1076030:intron | 55.0% | |
| GAAGCTAGGCCGGTTAGCAA+AGG | + | chr7_2:74432339-74432358 | Msa1076030:CDS | 55.0% | |
| CGGACGAGGAAGTAGTCCTT+TGG | - | chr7_2:74432398-74432417 | None:intergenic | 55.0% | |
| TAGAAGCAACCTACCGGACG+AGG | - | chr7_2:74432412-74432431 | None:intergenic | 55.0% | |
| TTGTGTGTGTGTGTGTGGGG+GGG | - | chr7_2:74433463-74433482 | None:intergenic | 55.0% | |
| GTTGTGTGTGTGTGTGTGGG+GGG | - | chr7_2:74433464-74433483 | None:intergenic | 55.0% | |
| ! | CGGCTTAGGTTGCGTCCATT+AGG | - | chr7_2:74433521-74433540 | None:intergenic | 55.0% |
| ! | CTTGAGTTGCTGGACTCTCC+TGG | + | chr7_2:74434138-74434157 | Msa1076030:CDS | 55.0% |
| GAGAACCTGCTACTGCGGGT+GGG | - | chr7_2:74430606-74430625 | None:intergenic | 60.0% | |
| TGTGGCAGCGAGAGGTGAAG+TGG | - | chr7_2:74430628-74430647 | None:intergenic | 60.0% | |
| GATGGTTCCGAAGGAGGGAC+TGG | + | chr7_2:74431086-74431105 | Msa1076030:CDS | 60.0% | |
| ATCGGTCCCAGTCCCTCCTT+CGG | - | chr7_2:74431096-74431115 | None:intergenic | 60.0% | |
| GAGGGACTGGGACCGATCTT+TGG | + | chr7_2:74431099-74431118 | Msa1076030:CDS | 60.0% | |
| GGACTACTTCCTCGTCCGGT+AGG | + | chr7_2:74432400-74432419 | Msa1076030:intron | 60.0% | |
| GAATGTGCCCAGCAGCTCCA+AGG | + | chr7_2:74433202-74433221 | Msa1076030:CDS | 60.0% | |
| TGTGTGTGTGTGTGTGGGGG+GGG | - | chr7_2:74433462-74433481 | None:intergenic | 60.0% | |
| GGAGAACCTGCTACTGCGGG+TGG | - | chr7_2:74430607-74430626 | None:intergenic | 65.0% | |
| !! | AGGGTTGGTGTGGCAGCGAG+AGG | - | chr7_2:74430636-74430655 | None:intergenic | 65.0% |
| !! | CTCCTGGCCTTGGAGCTGCT+GGG | - | chr7_2:74433212-74433231 | None:intergenic | 65.0% |
| !! | ACTCCTGGCCTTGGAGCTGC+TGG | - | chr7_2:74433213-74433232 | None:intergenic | 65.0% |
| TGTGTGTGTGTGTGGGGGGG+GGG | - | chr7_2:74433460-74433479 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | - | chr7_2:74433461-74433480 | None:intergenic | 65.0% | |
| TGCCCAGCAGCTCCAAGGCC+AGG | + | chr7_2:74433207-74433226 | Msa1076030:CDS | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | - | chr7_2:74433458-74433477 | None:intergenic | 70.0% | |
| GTGTGTGTGTGTGGGGGGGG+GGG | - | chr7_2:74433459-74433478 | None:intergenic | 70.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | - | chr7_2:74433456-74433475 | None:intergenic | 75.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | - | chr7_2:74433457-74433476 | None:intergenic | 75.0% | |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | - | chr7_2:74433454-74433473 | None:intergenic | 80.0% |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | - | chr7_2:74433455-74433474 | None:intergenic | 80.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433452-74433471 | None:intergenic | 85.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | - | chr7_2:74433453-74433472 | None:intergenic | 85.0% |
| ! | GTGGGGGGGGGGGGTGGGGG+GGG | - | chr7_2:74433423-74433442 | None:intergenic | 90.0% |
| ! | GGTGGGGGGGGGGGGTGGGG+GGG | - | chr7_2:74433424-74433443 | None:intergenic | 90.0% |
| ! | GGGTGGGGGGGGGGGGTGGG+GGG | - | chr7_2:74433425-74433444 | None:intergenic | 90.0% |
| ! | GGGGTGGGGGGGGGGGGTGG+GGG | - | chr7_2:74433426-74433445 | None:intergenic | 90.0% |
| ! | GGGGGTGGGGGGGGGGGGTG+GGG | - | chr7_2:74433427-74433446 | None:intergenic | 90.0% |
| ! | GGGGGGTGGGGGGGGGGGGT+GGG | - | chr7_2:74433428-74433447 | None:intergenic | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433450-74433469 | None:intergenic | 90.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433451-74433470 | None:intergenic | 90.0% |
| ! | GGGGGGGTGGGGGGGGGGGG+TGG | - | chr7_2:74433429-74433448 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGTGGGGGGGGG+GGG | - | chr7_2:74433432-74433451 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGTGGGGGGGG+GGG | - | chr7_2:74433420-74433439 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGTGGGGGGG+GGG | - | chr7_2:74433421-74433440 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGTGGGGGG+GGG | - | chr7_2:74433435-74433454 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGTGGGGG+GGG | - | chr7_2:74433436-74433455 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGGTGGGG+GGG | - | chr7_2:74433437-74433456 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGGGTGGG+GGG | - | chr7_2:74433438-74433457 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGGGGTGG+GGG | - | chr7_2:74433439-74433458 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGTG+GGG | - | chr7_2:74433440-74433459 | None:intergenic | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+GGG | - | chr7_2:74433441-74433460 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433448-74433467 | None:intergenic | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr7_2:74433449-74433468 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74430311 | 74435150 | 74430311 | ID=Msa1076030;Name=Msa1076030 |
| chr7_2 | mRNA | 74430311 | 74435150 | 74430311 | ID=Msa1076030-mRNA-1;Parent=Msa1076030;Name=Msa1076030-mRNA-1;_AED=0.36;_eAED=0.36;_QI=184|1|1|1|0.88|0.8|10|360|374 |
| chr7_2 | exon | 74430311 | 74430680 | 74430311 | ID=Msa1076030-mRNA-1:exon:17540;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74431065 | 74431175 | 74431065 | ID=Msa1076030-mRNA-1:exon:17541;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74431262 | 74431378 | 74431262 | ID=Msa1076030-mRNA-1:exon:17542;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74432096 | 74432239 | 74432096 | ID=Msa1076030-mRNA-1:exon:17543;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74432331 | 74432417 | 74432331 | ID=Msa1076030-mRNA-1:exon:17544;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74433132 | 74433247 | 74433132 | ID=Msa1076030-mRNA-1:exon:17545;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74434116 | 74434297 | 74434116 | ID=Msa1076030-mRNA-1:exon:17546;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74434412 | 74434469 | 74434412 | ID=Msa1076030-mRNA-1:exon:17547;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74434646 | 74435017 | 74434646 | ID=Msa1076030-mRNA-1:exon:17548;Parent=Msa1076030-mRNA-1 |
| chr7_2 | exon | 74435039 | 74435150 | 74435039 | ID=Msa1076030-mRNA-1:exon:17549;Parent=Msa1076030-mRNA-1 |
| chr7_2 | five_prime_UTR | 74430311 | 74430494 | 74430311 | ID=Msa1076030-mRNA-1:five_prime_utr;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74430495 | 74430680 | 74430495 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74431065 | 74431175 | 74431065 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74431262 | 74431378 | 74431262 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74432096 | 74432239 | 74432096 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74432331 | 74432417 | 74432331 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74433132 | 74433247 | 74433132 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74434116 | 74434297 | 74434116 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74434412 | 74434469 | 74434412 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | CDS | 74434646 | 74434769 | 74434646 | ID=Msa1076030-mRNA-1:cds;Parent=Msa1076030-mRNA-1 |
| chr7_2 | three_prime_UTR | 74434770 | 74435017 | 74434770 | ID=Msa1076030-mRNA-1:three_prime_utr;Parent=Msa1076030-mRNA-1 |
| chr7_2 | three_prime_UTR | 74435039 | 74435150 | 74435039 | ID=Msa1076030-mRNA-1:three_prime_utr;Parent=Msa1076030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
