AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143280 MtrunA17_Chr7g0266341 78.114 297 30 2 12 274 1 296 6.87e-163 453
Msa0143280 MtrunA17_Chr4g0008421 37.063 143 79 6 133 270 153 289 7.27e-19 84.3
Msa0143280 MtrunA17_Chr4g0008411 39.416 137 73 6 133 265 66 196 1.27e-17 80.1
Msa0143280 MtrunA17_Chr2g0306771 31.609 174 101 7 111 270 208 377 2.88e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143280 AT3G10130.1 55.805 267 83 2 41 272 41 307 2.61e-92 275
Msa0143280 AT2G37970.1 38.406 138 73 6 138 270 116 246 1.00e-16 77.8
Msa0143280 AT5G20140.1 30.000 190 84 6 111 270 203 373 9.00e-13 68.2
Msa0143280 AT5G20140.2 30.058 173 73 5 111 254 203 356 1.02e-11 65.1

Find 81 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATTACCATGTTTATTT+TGG 0.062441 1_4:-2171087 None:intergenic
TTTGAATTTCTGTTTGATTT+TGG 0.073218 1_4:-2171027 None:intergenic
CTTGGTTCATTGTTATTCTT+TGG 0.212487 1_4:-2171052 None:intergenic
GGATACTGGTGTGGTGGTTA+TGG 0.219699 1_4:-2171005 None:intergenic
TCAATCTGACGGGGTTAAAA+TGG 0.231954 1_4:+2172664 Msa0143280:CDS
GAAGGGACCAGTATGAAATT+AGG 0.242932 1_4:+2171614 Msa0143280:CDS
CCCGTCAGATTGATTCTTAC+TGG 0.247024 1_4:-2172654 None:intergenic
CGTTGAAATGGAAGAGAAAA+TGG 0.259478 1_4:-2174314 None:intergenic
TATTGATAAACAACAATATT+AGG 0.294362 1_4:-2174588 None:intergenic
ATAGATACAACTTTCTTGTT+AGG 0.296174 1_4:-2171161 None:intergenic
GAATACAACGGAGGAGAAAA+TGG 0.340380 1_4:+2172610 Msa0143280:intron
TTGGTTCATTGTTATTCTTT+GGG 0.344870 1_4:-2171051 None:intergenic
GTTTGTGTGTGTATTGAGTA+TGG 0.374915 1_4:+2174628 Msa0143280:three_prime_UTR
AAGGGACCAGTATGAAATTA+GGG 0.383324 1_4:+2171615 Msa0143280:CDS
AGTTCAAAGTTCTAACTAGA+AGG 0.388608 1_4:+2171596 Msa0143280:CDS
GGCTTGGACCCTAGACCTTA+AGG 0.393047 1_4:+2174668 Msa0143280:three_prime_UTR
AGTACCTCGAAACTGTATAT+TGG 0.398060 1_4:-2174392 None:intergenic
CAATTTCCCTAATTTCATAC+TGG 0.403074 1_4:-2171621 None:intergenic
ATCTCATTACGGCGTTGAAA+TGG 0.406251 1_4:-2174326 None:intergenic
ATGCTGACATGGTTCTTCGC+TGG 0.410084 1_4:-2171220 None:intergenic
TGCTGACATGGTTCTTCGCT+GGG 0.415232 1_4:-2171219 None:intergenic
ACTCGGATCCCTTAAGGTCT+AGG 0.430845 1_4:-2174677 None:intergenic
TAAATGATGAAGAAGTTAAG+AGG 0.439896 1_4:+2174102 Msa0143280:CDS
AATTGAACTCGGATCCCTTA+AGG 0.440720 1_4:-2174683 None:intergenic
CCTCCAATGCAATCTCATTA+CGG 0.447950 1_4:-2174337 None:intergenic
AATAATGTATCCACAGGGCT+TGG 0.453655 1_4:+2174652 Msa0143280:three_prime_UTR
AGGCAAGAGCACACCTGAAA+AGG 0.455534 1_4:-2173559 None:intergenic
TTTGTCATGCCTTCAAAGTA+CGG 0.455727 1_4:+2173462 Msa0143280:CDS
GCTTGGACCCTAGACCTTAA+GGG 0.467307 1_4:+2174669 Msa0143280:three_prime_UTR
CCGTAATGAGATTGCATTGG+AGG 0.470725 1_4:+2174337 Msa0143280:CDS
AACTTGACAGTCTCAAGGTC+CGG 0.485073 1_4:-2171577 None:intergenic
AAGTTAGCACCGTACTTTGA+AGG 0.490479 1_4:-2173471 None:intergenic
CAATCAACCTCGATTCATCA+TGG 0.498247 1_4:+2171134 Msa0143280:CDS
CCAGTAAGAATCAATCTGAC+GGG 0.498668 1_4:+2172654 Msa0143280:CDS
GTTGAAATGGAAGAGAAAAT+GGG 0.501128 1_4:-2174313 None:intergenic
TGAACGCTTCTTCGAGAGTA+CGG 0.505095 1_4:-2171459 None:intergenic
ATTGTCACAGAGGAATCTTT+AGG 0.506778 1_4:-2173501 None:intergenic
TTTGCCAATATACAGTTTCG+AGG 0.508866 1_4:+2174388 Msa0143280:three_prime_UTR
TATGGTAATAATGTATCCAC+AGG 0.509703 1_4:+2174646 Msa0143280:three_prime_UTR
CTCGAAGAAGCGTTCATGAC+AGG 0.512309 1_4:+2171466 Msa0143280:CDS
CTCGGATCCCTTAAGGTCTA+GGG 0.523163 1_4:-2174676 None:intergenic
CACTTGGACCGATGTAATGT+TGG 0.527159 1_4:+2174707 Msa0143280:three_prime_UTR
CGGACAGTTCAAAATTAAAG+AGG 0.529151 1_4:+2174160 Msa0143280:CDS
CAAACATCAACGTTGAGTAC+AGG 0.541578 1_4:-2174541 None:intergenic
ACGCCGTAATGAGATTGCAT+TGG 0.545636 1_4:+2174334 Msa0143280:CDS
GTTGCTAGAAGATGCAGAGT+TGG 0.547178 1_4:-2171186 None:intergenic
GTATGAAATTAGGGAAATTG+AGG 0.549915 1_4:+2171624 Msa0143280:CDS
GTTGATTGAAATGAAATACA+AGG 0.552830 1_4:-2171119 None:intergenic
TAATGAGATTGCATTGGAGG+TGG 0.555048 1_4:+2174340 Msa0143280:CDS
TGCAGTCTCAGTAACGGCAT+CGG 0.558896 1_4:-2171407 None:intergenic
TCGAGCTTCGAATGCTGACA+TGG 0.562557 1_4:-2171231 None:intergenic
GTTCAAAGTTCTAACTAGAA+GGG 0.562833 1_4:+2171597 Msa0143280:CDS
TTCCTCTGTGACAATTAAAG+AGG 0.565126 1_4:+2173509 Msa0143280:CDS
AATACCTTTGTTGTTAACAC+GGG 0.566075 1_4:-2172698 None:intergenic
AACTTCAGTAGAAATTGCAC+AGG 0.566109 1_4:+2174184 Msa0143280:CDS
ACCAGTAAGAATCAATCTGA+CGG 0.568080 1_4:+2172653 Msa0143280:CDS
ACAGAGGAATCTTTAGGCAG+TGG 0.575018 1_4:-2173495 None:intergenic
CTCTGTGACAATTAAAGAGG+TGG 0.579625 1_4:+2173512 Msa0143280:CDS
GATCCGAGTTCAATTCCACT+TGG 0.583037 1_4:+2174691 Msa0143280:three_prime_UTR
AGATTGCATTGGAGGTGGAG+TGG 0.593319 1_4:+2174345 Msa0143280:CDS
TTGATTGAAATGAAATACAA+GGG 0.593601 1_4:-2171118 None:intergenic
TAATACCTTTGTTGTTAACA+CGG 0.597561 1_4:-2172699 None:intergenic
TTGAAATGGAAGAGAAAATG+GGG 0.598136 1_4:-2174312 None:intergenic
CTTTGAACTTGACAGTCTCA+AGG 0.599106 1_4:-2171582 None:intergenic
CAACATTACATCGGTCCAAG+TGG 0.616072 1_4:-2174706 None:intergenic
GAAATACAAGGGTTGCAAAG+AGG 0.619038 1_4:-2171107 None:intergenic
GGACAGTTCAAAATTAAAGA+GGG 0.619400 1_4:+2174161 Msa0143280:CDS
TTTACGTCGCTGTGAGAGAG+AGG 0.620129 1_4:-2171288 None:intergenic
AACTCCCGTGTTAACAACAA+AGG 0.626293 1_4:+2172694 Msa0143280:CDS
GGTCCAAGTGGAATTGAACT+CGG 0.631461 1_4:-2174694 None:intergenic
GTACTTTGCAGTCTCAGTAA+CGG 0.640972 1_4:-2171413 None:intergenic
ACGTCGCTGTGAGAGAGAGG+TGG 0.646916 1_4:-2171285 None:intergenic
TTCAATTCCCAAAATAAACA+TGG 0.650735 1_4:+2171079 Msa0143280:CDS
AGACTGGAGATAAAGATGAG+TGG 0.658108 1_4:+2173430 Msa0143280:intron
CAGTAAGAATCAATCTGACG+GGG 0.666209 1_4:+2172655 Msa0143280:CDS
CACCTCTTTAATTGTCACAG+AGG 0.686016 1_4:-2173511 None:intergenic
TCTACAAACCAACATTACAT+CGG 0.689017 1_4:-2174715 None:intergenic
GGTCTAGGGTCCAAGCCCTG+TGG 0.693858 1_4:-2174662 None:intergenic
TGAAATGGAAGAGAAAATGG+GGG 0.710764 1_4:-2174311 None:intergenic
TTGATGGTAGAATACAACGG+AGG 0.744492 1_4:+2172601 Msa0143280:intron
ATGGTAATAATGTATCCACA+GGG 0.754060 1_4:+2174647 Msa0143280:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTATATTGTTAATTATTT+CGG + chr1_4:2171533-2171552 Msa0143280:intron 10.0%
!!! ACTATAATTATTCAATATTT+TGG + chr1_4:2171655-2171674 Msa0143280:intron 10.0%
!!! GATTTTTTTTCATAATAAAA+TGG + chr1_4:2172723-2172742 Msa0143280:intron 10.0%
!! ATATATATTAACATGTAATT+GGG - chr1_4:2173188-2173207 None:intergenic 10.0%
!! TATATATATTAACATGTAAT+TGG - chr1_4:2173189-2173208 None:intergenic 10.0%
!!! ATGTTAATATATATATTTTC+TGG + chr1_4:2173194-2173213 Msa0143280:intron 10.0%
!! GAAAAATACATAATTAATTT+AGG - chr1_4:2174056-2174075 None:intergenic 10.0%
!! AACTAATAAAAAACTCATAA+AGG - chr1_4:2171829-2171848 None:intergenic 15.0%
!! GAATCAAATGTTTATTTAAA+TGG + chr1_4:2172083-2172102 Msa0143280:intron 15.0%
!!! TGCATTTTTAAAATTTCATT+GGG + chr1_4:2172506-2172525 Msa0143280:intron 15.0%
!!! ATATATTGAAATAATTTTGC+TGG - chr1_4:2172799-2172818 None:intergenic 15.0%
!! TTATAAATTCCTTTCAATTA+TGG + chr1_4:2172836-2172855 Msa0143280:intron 15.0%
!! TGAAAAATAAATATTAGGTT+AGG - chr1_4:2172878-2172897 None:intergenic 15.0%
!!! TTTTTTTCTTTTTTGTGAAT+AGG + chr1_4:2174517-2174536 Msa0143280:intron 15.0%
!! TATTGATAAACAACAATATT+AGG - chr1_4:2174591-2174610 None:intergenic 15.0%
!! ATAAAAAATATAAACTGTGC+CGG + chr1_4:2170977-2170996 Msa0143280:five_prime_UTR 20.0%
!!! TTGAATTTCTGTTTGATTTT+GGG - chr1_4:2171029-2171048 None:intergenic 20.0%
!!! TTTGAATTTCTGTTTGATTT+TGG - chr1_4:2171030-2171049 None:intergenic 20.0%
!! TTGATTGAAATGAAATACAA+GGG - chr1_4:2171121-2171140 None:intergenic 20.0%
!!! ATTTTCTTTTTGTTCACAAA+AGG + chr1_4:2171723-2171742 Msa0143280:intron 20.0%
!! AATAAAAAACTCATAAAGGA+AGG - chr1_4:2171825-2171844 None:intergenic 20.0%
!!! GTTTTTTTATTTTGGAAACT+TGG - chr1_4:2172060-2172079 None:intergenic 20.0%
!!! GATTCTTCGTTTTTTTATTT+TGG - chr1_4:2172068-2172087 None:intergenic 20.0%
!! TGTTCTTATTGAAGTTATTT+AGG + chr1_4:2172207-2172226 Msa0143280:intron 20.0%
!! GTTCTTATTGAAGTTATTTA+GGG + chr1_4:2172208-2172227 Msa0143280:intron 20.0%
!!! CAATGAAATTTTAAAAATGC+AGG - chr1_4:2172507-2172526 None:intergenic 20.0%
!!! CTGCATTTTTAAAATTTCAT+TGG + chr1_4:2172505-2172524 Msa0143280:intron 20.0%
!!! AGTCCTTATTTATTTTCATA+TGG + chr1_4:2172769-2172788 Msa0143280:intron 20.0%
!! AAGCCATATGAAAATAAATA+AGG - chr1_4:2172775-2172794 None:intergenic 20.0%
!! ATTCATAGGTTCTTTAAATA+TGG + chr1_4:2173062-2173081 Msa0143280:intron 20.0%
!! TTGATATTGTTCTTTACTAT+AGG + chr1_4:2173145-2173164 Msa0143280:intron 20.0%
!!! TTTAGTTCTAGTATTCAATT+AGG + chr1_4:2173227-2173246 Msa0143280:intron 20.0%
!!! ATACAATATACAAAGCATTA+AGG - chr1_4:2173582-2173601 None:intergenic 20.0%
!! GTATTGGATTATGATTATAA+AGG + chr1_4:2173652-2173671 Msa0143280:intron 20.0%
!! ATGACTGAATATTTAACTAA+TGG + chr1_4:2173679-2173698 Msa0143280:intron 20.0%
!! TACTAGCAATACATTATAAT+TGG - chr1_4:2173890-2173909 None:intergenic 20.0%
!! CACTTATAATAAGTATTTAG+AGG - chr1_4:2174001-2174020 None:intergenic 20.0%
!! CTCTAAATACTTATTATAAG+TGG + chr1_4:2173999-2174018 Msa0143280:intron 20.0%
! TAAAAAATATAAACTGTGCC+GGG + chr1_4:2170978-2170997 Msa0143280:five_prime_UTR 25.0%
!! TTGGTTCATTGTTATTCTTT+GGG - chr1_4:2171054-2171073 None:intergenic 25.0%
! TTCAATTCCCAAAATAAACA+TGG + chr1_4:2171079-2171098 Msa0143280:CDS 25.0%
!!! GGAATTACCATGTTTATTTT+GGG - chr1_4:2171089-2171108 None:intergenic 25.0%
!! AGGAATTACCATGTTTATTT+TGG - chr1_4:2171090-2171109 None:intergenic 25.0%
! GTTGATTGAAATGAAATACA+AGG - chr1_4:2171122-2171141 None:intergenic 25.0%
! ATAGATACAACTTTCTTGTT+AGG - chr1_4:2171164-2171183 None:intergenic 25.0%
!!! AAGAGATAAGTAGGATTTTT+TGG - chr1_4:2171326-2171345 None:intergenic 25.0%
! AAAATGATGAAGAGATAAGT+AGG - chr1_4:2171335-2171354 None:intergenic 25.0%
! ATTTCTTCATGTTCTTACTT+GGG + chr1_4:2171754-2171773 Msa0143280:intron 25.0%
! TGGAAAAGCTTTCATTAATT+TGG + chr1_4:2172103-2172122 Msa0143280:intron 25.0%
!! AATTTGGAGCTAATTCAAAT+TGG + chr1_4:2172119-2172138 Msa0143280:intron 25.0%
! TGGAAAAACTTTCATTAACT+TGG + chr1_4:2172139-2172158 Msa0143280:intron 25.0%
! CTGGTATTATTACAAAACAT+GGG - chr1_4:2172305-2172324 None:intergenic 25.0%
! ACTGGTATTATTACAAAACA+TGG - chr1_4:2172306-2172325 None:intergenic 25.0%
!! TGTTTTGTAATAATACCAGT+TGG + chr1_4:2172306-2172325 Msa0143280:intron 25.0%
!!! TAATACCTTTGTTGTTAACA+CGG - chr1_4:2172702-2172721 None:intergenic 25.0%
!!! AACTTTAATTTGATTGAACC+TGG - chr1_4:2172954-2172973 None:intergenic 25.0%
!! ATGAATTCAAAAGACTTTTC+AGG - chr1_4:2173048-2173067 None:intergenic 25.0%
!! GAAAAGTCTTTTGAATTCAT+AGG + chr1_4:2173048-2173067 Msa0143280:intron 25.0%
! CTTGAACTTTACATATTACT+GGG - chr1_4:2173088-2173107 None:intergenic 25.0%
! CATGCAAATATACATATGAA+TGG - chr1_4:2173738-2173757 None:intergenic 25.0%
! ATTATTGAGTGTAATTCATG+TGG + chr1_4:2173798-2173817 Msa0143280:intron 25.0%
! TAAATGATGAAGAAGTTAAG+AGG + chr1_4:2174102-2174121 Msa0143280:CDS 25.0%
! CTTGGTTCATTGTTATTCTT+TGG - chr1_4:2171055-2171074 None:intergenic 30.0%
! AGTTCAAAGTTCTAACTAGA+AGG + chr1_4:2171596-2171615 Msa0143280:CDS 30.0%
! GTTCAAAGTTCTAACTAGAA+GGG + chr1_4:2171597-2171616 Msa0143280:CDS 30.0%
CAATTTCCCTAATTTCATAC+TGG - chr1_4:2171624-2171643 None:intergenic 30.0%
GTATGAAATTAGGGAAATTG+AGG + chr1_4:2171624-2171643 Msa0143280:CDS 30.0%
GATTTCTTCATGTTCTTACT+TGG + chr1_4:2171753-2171772 Msa0143280:intron 30.0%
AGACAAATGATCGATTAATC+CGG - chr1_4:2172032-2172051 None:intergenic 30.0%
ATGTTTCCTGCAAATAGAAA+AGG + chr1_4:2172165-2172184 Msa0143280:intron 30.0%
TGTTTCCTGCAAATAGAAAA+GGG + chr1_4:2172166-2172185 Msa0143280:intron 30.0%
!! TGAAGTTATTTAGGGTCTTT+TGG + chr1_4:2172216-2172235 Msa0143280:intron 30.0%
GTATTACTACCTTACCAAAA+AGG - chr1_4:2172463-2172482 None:intergenic 30.0%
AACTTCTCTCAAAAGTGAAA+GGG - chr1_4:2172562-2172581 None:intergenic 30.0%
TAACTTCTCTCAAAAGTGAA+AGG - chr1_4:2172563-2172582 None:intergenic 30.0%
!! CTTTTGATGGTAGAATACAA+CGG + chr1_4:2172598-2172617 Msa0143280:intron 30.0%
TGATTCTTACTGGTAAAAAC+AGG - chr1_4:2172647-2172666 None:intergenic 30.0%
!! AATACCTTTGTTGTTAACAC+GGG - chr1_4:2172701-2172720 None:intergenic 30.0%
GTTTAACTGCCATAATTGAA+AGG - chr1_4:2172848-2172867 None:intergenic 30.0%
CAATCAAATTAAAGTTCAGC+TGG + chr1_4:2172958-2172977 Msa0143280:intron 30.0%
TTAAACAACTTAAACTACCC+TGG + chr1_4:2172984-2173003 Msa0143280:intron 30.0%
GCTTGAACTTTACATATTAC+TGG - chr1_4:2173089-2173108 None:intergenic 30.0%
ATCGATGTATTATCTTAGAC+TGG + chr1_4:2173414-2173433 Msa0143280:intron 30.0%
CTACTAAATAACCAATGACA+GGG - chr1_4:2173630-2173649 None:intergenic 30.0%
!!! GTGTGTGTGTTTTATTTTTC+AGG + chr1_4:2173973-2173992 Msa0143280:intron 30.0%
GGACAGTTCAAAATTAAAGA+GGG + chr1_4:2174161-2174180 Msa0143280:CDS 30.0%
TTAAATCCTTAACGCAATCT+AGG + chr1_4:2174207-2174226 Msa0143280:intron 30.0%
TAAATCCTTAACGCAATCTA+GGG + chr1_4:2174208-2174227 Msa0143280:intron 30.0%
ACTACCATTTGAAGAAGAAA+GGG - chr1_4:2174264-2174283 None:intergenic 30.0%
AACTACCATTTGAAGAAGAA+AGG - chr1_4:2174265-2174284 None:intergenic 30.0%
TTGAAATGGAAGAGAAAATG+GGG - chr1_4:2174315-2174334 None:intergenic 30.0%
GTTGAAATGGAAGAGAAAAT+GGG - chr1_4:2174316-2174335 None:intergenic 30.0%
GAGTACAAAATATCTTGTAC+TGG - chr1_4:2174481-2174500 None:intergenic 30.0%
TATGGTAATAATGTATCCAC+AGG + chr1_4:2174646-2174665 Msa0143280:three_prime_UTR 30.0%
ATGGTAATAATGTATCCACA+GGG + chr1_4:2174647-2174666 Msa0143280:three_prime_UTR 30.0%
TCTACAAACCAACATTACAT+CGG - chr1_4:2174718-2174737 None:intergenic 30.0%
!!! TCTGTTTGATTTTGGGATAC+TGG - chr1_4:2171022-2171041 None:intergenic 35.0%
!! TTTTGGGAATTGAATGTGCT+TGG - chr1_4:2171073-2171092 None:intergenic 35.0%
! GTACGGCTTTCAAATCTTTT+TGG - chr1_4:2171445-2171464 None:intergenic 35.0%
TTTGAGCTTTCTTGTAGTTC+CGG + chr1_4:2171558-2171577 Msa0143280:intron 35.0%
AAGGGACCAGTATGAAATTA+GGG + chr1_4:2171615-2171634 Msa0143280:CDS 35.0%
ATCAAAAGTTTATAACCCCC+AGG + chr1_4:2171853-2171872 Msa0143280:intron 35.0%
TCAAAAGTTTATAACCCCCA+GGG + chr1_4:2171854-2171873 Msa0143280:intron 35.0%
TCCACATAGAGCTTTCAATT+GGG + chr1_4:2171977-2171996 Msa0143280:intron 35.0%
ACAAATGATCGATTAATCCG+GGG - chr1_4:2172030-2172049 None:intergenic 35.0%
GACAAATGATCGATTAATCC+GGG - chr1_4:2172031-2172050 None:intergenic 35.0%
GGATTAATCGATCATTTGTC+TGG + chr1_4:2172031-2172050 Msa0143280:intron 35.0%
! AATCTCCCTTTTCTATTTGC+AGG - chr1_4:2172174-2172193 None:intergenic 35.0%
ATAGAAAAGGGAGATTAGAG+AGG + chr1_4:2172178-2172197 Msa0143280:intron 35.0%
TAGAAAAGGGAGATTAGAGA+GGG + chr1_4:2172179-2172198 Msa0143280:intron 35.0%
AAACAGCAACACAACTTTGA+GGG - chr1_4:2172262-2172281 None:intergenic 35.0%
AAAACAGCAACACAACTTTG+AGG - chr1_4:2172263-2172282 None:intergenic 35.0%
!!! GTGTTGCTGTTTTATAATCG+AGG + chr1_4:2172270-2172289 Msa0143280:intron 35.0%
AAAGACAATCAAGTCAAGGT+AGG - chr1_4:2172347-2172366 None:intergenic 35.0%
!! TACCTTACCAAAAAGGTATC+CGG - chr1_4:2172456-2172475 None:intergenic 35.0%
AAAAATGCAGGAATGTAGCT+CGG - chr1_4:2172495-2172514 None:intergenic 35.0%
! AAATTTCATTGGGTTGCTGT+TGG + chr1_4:2172516-2172535 Msa0143280:intron 35.0%
ACTTCTCTCAAAAGTGAAAG+GGG - chr1_4:2172561-2172580 None:intergenic 35.0%
!! GATGTGTGTTGTTCTTTTGA+TGG + chr1_4:2172585-2172604 Msa0143280:intron 35.0%
ACCAGTAAGAATCAATCTGA+CGG + chr1_4:2172653-2172672 Msa0143280:CDS 35.0%
CAGCTTGACAAAATATTCCA+GGG - chr1_4:2173004-2173023 None:intergenic 35.0%
TCAGCTTGACAAAATATTCC+AGG - chr1_4:2173005-2173024 None:intergenic 35.0%
CATGTAATTGGGATAGAACA+TGG - chr1_4:2173177-2173196 None:intergenic 35.0%
TAGGAGATATTTCTTGAGCT+TGG + chr1_4:2173246-2173265 Msa0143280:intron 35.0%
TTTGTCATGCCTTCAAAGTA+CGG + chr1_4:2173462-2173481 Msa0143280:CDS 35.0%
ATTGTCACAGAGGAATCTTT+AGG - chr1_4:2173504-2173523 None:intergenic 35.0%
TTCCTCTGTGACAATTAAAG+AGG + chr1_4:2173509-2173528 Msa0143280:CDS 35.0%
!! AACCACAGCAACTATTTTTC+TGG - chr1_4:2173538-2173557 None:intergenic 35.0%
! TTTCATTTTGTCCCTGTCAT+TGG + chr1_4:2173616-2173635 Msa0143280:intron 35.0%
CCTACTAAATAACCAATGAC+AGG - chr1_4:2173631-2173650 None:intergenic 35.0%
! CCTGTCATTGGTTATTTAGT+AGG + chr1_4:2173628-2173647 Msa0143280:intron 35.0%
TGGTTATTTAGTAGGCGTAT+TGG + chr1_4:2173636-2173655 Msa0143280:intron 35.0%
TAATTGGACGAAGTTCATGT+GGG - chr1_4:2173874-2173893 None:intergenic 35.0%
ATAATTGGACGAAGTTCATG+TGG - chr1_4:2173875-2173894 None:intergenic 35.0%
AAAGACTCGATGAATCATGT+AGG - chr1_4:2173943-2173962 None:intergenic 35.0%
CAAAACCTGATTCAGTACAA+AGG - chr1_4:2174082-2174101 None:intergenic 35.0%
AGAGAAGCCATGAAAAATGA+CGG + chr1_4:2174140-2174159 Msa0143280:CDS 35.0%
CGGACAGTTCAAAATTAAAG+AGG + chr1_4:2174160-2174179 Msa0143280:CDS 35.0%
AACTTCAGTAGAAATTGCAC+AGG + chr1_4:2174184-2174203 Msa0143280:CDS 35.0%
AAATCCTTAACGCAATCTAG+GGG + chr1_4:2174209-2174228 Msa0143280:intron 35.0%
TGAAATGGAAGAGAAAATGG+GGG - chr1_4:2174314-2174333 None:intergenic 35.0%
CGTTGAAATGGAAGAGAAAA+TGG - chr1_4:2174317-2174336 None:intergenic 35.0%
TTTGCCAATATACAGTTTCG+AGG + chr1_4:2174388-2174407 Msa0143280:three_prime_UTR 35.0%
AGTACCTCGAAACTGTATAT+TGG - chr1_4:2174395-2174414 None:intergenic 35.0%
! TCTGATTCATGATAACGAAC+AGG - chr1_4:2174456-2174475 None:intergenic 35.0%
GTTTGTGTGTGTATTGAGTA+TGG + chr1_4:2174628-2174647 Msa0143280:three_prime_UTR 35.0%
!!! TTGATTTTGGGATACTGGTG+TGG - chr1_4:2171017-2171036 None:intergenic 40.0%
GAAATACAAGGGTTGCAAAG+AGG - chr1_4:2171110-2171129 None:intergenic 40.0%
CAATCAACCTCGATTCATCA+TGG + chr1_4:2171134-2171153 Msa0143280:CDS 40.0%
! AGGTTTTCCATGATGAATCG+AGG - chr1_4:2171144-2171163 None:intergenic 40.0%
GTACTTTGCAGTCTCAGTAA+CGG - chr1_4:2171416-2171435 None:intergenic 40.0%
CTTTGAACTTGACAGTCTCA+AGG - chr1_4:2171585-2171604 None:intergenic 40.0%
GAAGGGACCAGTATGAAATT+AGG + chr1_4:2171614-2171633 Msa0143280:CDS 40.0%
TTCATGTTCTTACTTGGGCT+TGG + chr1_4:2171759-2171778 Msa0143280:intron 40.0%
TCATGTTCTTACTTGGGCTT+GGG + chr1_4:2171760-2171779 Msa0143280:intron 40.0%
CAAAAGTTTATAACCCCCAG+GGG + chr1_4:2171855-2171874 Msa0143280:intron 40.0%
ATTGAAAGCTCTATGTGGAC+TGG - chr1_4:2171976-2171995 None:intergenic 40.0%
GTCCACATAGAGCTTTCAAT+TGG + chr1_4:2171976-2171995 Msa0143280:intron 40.0%
CAAATGATCGATTAATCCGG+GGG - chr1_4:2172029-2172048 None:intergenic 40.0%
AGAAAAGGGAGATTAGAGAG+GGG + chr1_4:2172180-2172199 Msa0143280:intron 40.0%
! TTAGGGTCTTTTGGCACATT+TGG + chr1_4:2172225-2172244 Msa0143280:intron 40.0%
! TCTTTTGGCACATTTGGATG+TGG + chr1_4:2172231-2172250 Msa0143280:intron 40.0%
! CTTTTGGCACATTTGGATGT+GGG + chr1_4:2172232-2172251 Msa0143280:intron 40.0%
TGAGATTGATAGGAACCAAC+TGG - chr1_4:2172324-2172343 None:intergenic 40.0%
TCAAGGTAGGTGAGATTGAT+AGG - chr1_4:2172334-2172353 None:intergenic 40.0%
CTGCAAAGACAATCAAGTCA+AGG - chr1_4:2172351-2172370 None:intergenic 40.0%
GTAGTCTCTGCTACAAAGTA+AGG - chr1_4:2172374-2172393 None:intergenic 40.0%
CAGTCATTTAATGTCCTTGC+CGG + chr1_4:2172434-2172453 Msa0143280:intron 40.0%
! TTGATGGTAGAATACAACGG+AGG + chr1_4:2172601-2172620 Msa0143280:intron 40.0%
GAATACAACGGAGGAGAAAA+TGG + chr1_4:2172610-2172629 Msa0143280:intron 40.0%
CCAGTAAGAATCAATCTGAC+GGG + chr1_4:2172654-2172673 Msa0143280:CDS 40.0%
CAGTAAGAATCAATCTGACG+GGG + chr1_4:2172655-2172674 Msa0143280:CDS 40.0%
TCAATCTGACGGGGTTAAAA+TGG + chr1_4:2172664-2172683 Msa0143280:CDS 40.0%
AACTCCCGTGTTAACAACAA+AGG + chr1_4:2172694-2172713 Msa0143280:CDS 40.0%
AAACCAAACTTCACGAATCC+AGG + chr1_4:2172933-2172952 Msa0143280:intron 40.0%
CCAAACTGCAAACTAATCTC+TGG - chr1_4:2173120-2173139 None:intergenic 40.0%
!! CCAGAGATTAGTTTGCAGTT+TGG + chr1_4:2173117-2173136 Msa0143280:intron 40.0%
!! TTTCTTGAGCTTGGTGATGT+TGG + chr1_4:2173255-2173274 Msa0143280:intron 40.0%
AGACTGGAGATAAAGATGAG+TGG + chr1_4:2173430-2173449 Msa0143280:intron 40.0%
AAGTTAGCACCGTACTTTGA+AGG - chr1_4:2173474-2173493 None:intergenic 40.0%
CACCTCTTTAATTGTCACAG+AGG - chr1_4:2173514-2173533 None:intergenic 40.0%
CTCTGTGACAATTAAAGAGG+TGG + chr1_4:2173512-2173531 Msa0143280:CDS 40.0%
AGCACAGATAACACACAGAT+TGG + chr1_4:2173706-2173725 Msa0143280:intron 40.0%
AATTGGACGAAGTTCATGTG+GGG - chr1_4:2173873-2173892 None:intergenic 40.0%
TCCTTCCTTTGTACTGAATC+AGG + chr1_4:2174074-2174093 Msa0143280:intron 40.0%
ACCTGATTCAGTACAAAGGA+AGG - chr1_4:2174078-2174097 None:intergenic 40.0%
!!! GAACTGTCCGTCATTTTTCA+TGG - chr1_4:2174150-2174169 None:intergenic 40.0%
TTAACCCCTAGATTGCGTTA+AGG - chr1_4:2174216-2174235 None:intergenic 40.0%
CGATCCCTTTCTTCTTCAAA+TGG + chr1_4:2174257-2174276 Msa0143280:intron 40.0%
! ATCTCATTACGGCGTTGAAA+TGG - chr1_4:2174329-2174348 None:intergenic 40.0%
CCTCCAATGCAATCTCATTA+CGG - chr1_4:2174340-2174359 None:intergenic 40.0%
TAATGAGATTGCATTGGAGG+TGG + chr1_4:2174340-2174359 Msa0143280:CDS 40.0%
CAAACATCAACGTTGAGTAC+AGG - chr1_4:2174544-2174563 None:intergenic 40.0%
AATAATGTATCCACAGGGCT+TGG + chr1_4:2174652-2174671 Msa0143280:three_prime_UTR 40.0%
AATTGAACTCGGATCCCTTA+AGG - chr1_4:2174686-2174705 None:intergenic 40.0%
! TGTGGTGGTTATGGTTTTCC+CGG - chr1_4:2170999-2171018 None:intergenic 45.0%
!!! ATTTTGGGATACTGGTGTGG+TGG - chr1_4:2171014-2171033 None:intergenic 45.0%
GTTGCTAGAAGATGCAGAGT+TGG - chr1_4:2171189-2171208 None:intergenic 45.0%
TGAACGCTTCTTCGAGAGTA+CGG - chr1_4:2171462-2171481 None:intergenic 45.0%
AACTTGACAGTCTCAAGGTC+CGG - chr1_4:2171580-2171599 None:intergenic 45.0%
TGTTACAGCCGTACACTTAC+AGG - chr1_4:2171792-2171811 None:intergenic 45.0%
GGGCCAATAAATCCTGCTTT+GGG + chr1_4:2171950-2171969 Msa0143280:intron 45.0%
TGGCCCAAAGCAGGATTTAT+TGG - chr1_4:2171956-2171975 None:intergenic 45.0%
GCCCAATTGAAAGCTCTATG+TGG - chr1_4:2171981-2172000 None:intergenic 45.0%
AAATCCCATCGTCTACTAGC+GGG - chr1_4:2172004-2172023 None:intergenic 45.0%
CAAATCCCATCGTCTACTAG+CGG - chr1_4:2172005-2172024 None:intergenic 45.0%
TAGCAGAGACTACAATGCCT+GGG + chr1_4:2172381-2172400 Msa0143280:intron 45.0%
! AAGAGTGGGTTCGATTTCAG+TGG + chr1_4:2172404-2172423 Msa0143280:intron 45.0%
!! TACCAAAAAGGTATCCGGCA+AGG - chr1_4:2172451-2172470 None:intergenic 45.0%
!! TGCCGGATACCTTTTTGGTA+AGG + chr1_4:2172451-2172470 Msa0143280:intron 45.0%
! CTGTTGGTTGCTGCATATCT+TGG + chr1_4:2172532-2172551 Msa0143280:intron 45.0%
! CCCGTCAGATTGATTCTTAC+TGG - chr1_4:2172657-2172676 None:intergenic 45.0%
GAACCTGGATTCGTGAAGTT+TGG - chr1_4:2172939-2172958 None:intergenic 45.0%
!! TGAGCTTGGTGATGTTGGTT+TGG + chr1_4:2173260-2173279 Msa0143280:intron 45.0%
!! GAGCTTGGTGATGTTGGTTT+GGG + chr1_4:2173261-2173280 Msa0143280:intron 45.0%
ATCAAACCTAAGACGCTGAG+AGG - chr1_4:2173302-2173321 None:intergenic 45.0%
GTCTTAGGTTTGATTCTCCC+CGG + chr1_4:2173308-2173327 Msa0143280:intron 45.0%
CCAAACTAGCCCATGGAAAT+TGG - chr1_4:2173336-2173355 None:intergenic 45.0%
!! CCAATTTCCATGGGCTAGTT+TGG + chr1_4:2173333-2173352 Msa0143280:intron 45.0%
TAAGAAGCCAAACTAGCCCA+TGG - chr1_4:2173343-2173362 None:intergenic 45.0%
ACAGAGGAATCTTTAGGCAG+TGG - chr1_4:2173498-2173517 None:intergenic 45.0%
GGCCAGAAAAATAGTTGCTG+TGG + chr1_4:2173533-2173552 Msa0143280:CDS 45.0%
! GTTGCTGTGGTTTCCTTTTC+AGG + chr1_4:2173546-2173565 Msa0143280:CDS 45.0%
AGGTCTCTCTTCCTATTTGG+AGG - chr1_4:2173835-2173854 None:intergenic 45.0%
TGCAGGTCTCTCTTCCTATT+TGG - chr1_4:2173838-2173857 None:intergenic 45.0%
CTAGGGGTTAAACGTCTGTA+AGG + chr1_4:2174225-2174244 Msa0143280:intron 45.0%
ACGCCGTAATGAGATTGCAT+TGG + chr1_4:2174334-2174353 Msa0143280:CDS 45.0%
CCGTAATGAGATTGCATTGG+AGG + chr1_4:2174337-2174356 Msa0143280:CDS 45.0%
GGTGGAGTGGAAAAACAAGT+AGG + chr1_4:2174358-2174377 Msa0143280:CDS 45.0%
GATCCGAGTTCAATTCCACT+TGG + chr1_4:2174691-2174710 Msa0143280:three_prime_UTR 45.0%
GGTCCAAGTGGAATTGAACT+CGG - chr1_4:2174697-2174716 None:intergenic 45.0%
CAACATTACATCGGTCCAAG+TGG - chr1_4:2174709-2174728 None:intergenic 45.0%
CACTTGGACCGATGTAATGT+TGG + chr1_4:2174707-2174726 Msa0143280:three_prime_UTR 45.0%
!! ATTATTGAAAAATAAATATT+AGG - chr1_4:2172883-2172902 None:intergenic 5.0%
GGATACTGGTGTGGTGGTTA+TGG - chr1_4:2171008-2171027 None:intergenic 50.0%
TGCTGACATGGTTCTTCGCT+GGG - chr1_4:2171222-2171241 None:intergenic 50.0%
ATGCTGACATGGTTCTTCGC+TGG - chr1_4:2171223-2171242 None:intergenic 50.0%
TCGAGCTTCGAATGCTGACA+TGG - chr1_4:2171234-2171253 None:intergenic 50.0%
TTTACGTCGCTGTGAGAGAG+AGG - chr1_4:2171291-2171310 None:intergenic 50.0%
TGCAGTCTCAGTAACGGCAT+CGG - chr1_4:2171410-2171429 None:intergenic 50.0%
!! CTCGAAGAAGCGTTCATGAC+AGG + chr1_4:2171466-2171485 Msa0143280:CDS 50.0%
GGCATGTGCCTGTAAGTGTA+CGG + chr1_4:2171781-2171800 Msa0143280:intron 50.0%
GTTTATAACCCCCAGGGGTT+TGG + chr1_4:2171860-2171879 Msa0143280:intron 50.0%
GGTCTCAAGTCTTCACCACA+AGG - chr1_4:2171894-2171913 None:intergenic 50.0%
GTGGTGAAGACTTGAGACCT+AGG + chr1_4:2171895-2171914 Msa0143280:intron 50.0%
CTGAGACATGAGCACTTCCT+AGG - chr1_4:2171915-2171934 None:intergenic 50.0%
!! CTAGGAAGTGCTCATGTCTC+AGG + chr1_4:2171913-2171932 Msa0143280:intron 50.0%
TCTCAGGTTCGAATCTCCCA+GGG + chr1_4:2171929-2171948 Msa0143280:intron 50.0%
AGCAGGATTTATTGGCCCCT+GGG - chr1_4:2171948-2171967 None:intergenic 50.0%
AAGCAGGATTTATTGGCCCC+TGG - chr1_4:2171949-2171968 None:intergenic 50.0%
GGGGCCAATAAATCCTGCTT+TGG + chr1_4:2171949-2171968 Msa0143280:intron 50.0%
AATCCCATCGTCTACTAGCG+GGG - chr1_4:2172003-2172022 None:intergenic 50.0%
GTAGCAGAGACTACAATGCC+TGG + chr1_4:2172380-2172399 Msa0143280:intron 50.0%
ACTACAATGCCTGGGAAGAG+TGG + chr1_4:2172389-2172408 Msa0143280:intron 50.0%
CTACAATGCCTGGGAAGAGT+GGG + chr1_4:2172390-2172409 Msa0143280:intron 50.0%
AAATCGAACCCACTCTTCCC+AGG - chr1_4:2172401-2172420 None:intergenic 50.0%
! GTCCTTGCCGGATACCTTTT+TGG + chr1_4:2172446-2172465 Msa0143280:intron 50.0%
TAGCCCATGGAAATTGGCAC+CGG - chr1_4:2173330-2173349 None:intergenic 50.0%
! AGGCAAGAGCACACCTGAAA+AGG - chr1_4:2173562-2173581 None:intergenic 50.0%
CCTATTTGGAGGTTCGCACA+TGG - chr1_4:2173824-2173843 None:intergenic 50.0%
CCATGTGCGAACCTCCAAAT+AGG + chr1_4:2173821-2173840 Msa0143280:intron 50.0%
AGATTGCATTGGAGGTGGAG+TGG + chr1_4:2174345-2174364 Msa0143280:CDS 50.0%
GCTTGGACCCTAGACCTTAA+GGG + chr1_4:2174669-2174688 Msa0143280:three_prime_UTR 50.0%
CTCGGATCCCTTAAGGTCTA+GGG - chr1_4:2174679-2174698 None:intergenic 50.0%
ACTCGGATCCCTTAAGGTCT+AGG - chr1_4:2174680-2174699 None:intergenic 50.0%
! ATAACCCCCAGGGGTTTGGT+TGG + chr1_4:2171864-2171883 Msa0143280:intron 55.0%
!! GGTTTGGTTGGTTGGCCTTG+TGG + chr1_4:2171876-2171895 Msa0143280:intron 55.0%
GTCTCAGGTTCGAATCTCCC+AGG + chr1_4:2171928-2171947 Msa0143280:intron 55.0%
CTCAGGTTCGAATCTCCCAG+GGG + chr1_4:2171930-2171949 Msa0143280:intron 55.0%
!! TATGTGGACTGGCCCAAAGC+AGG - chr1_4:2171965-2171984 None:intergenic 55.0%
AGACGATGGGATTTGTCCCC+CGG + chr1_4:2172010-2172029 Msa0143280:intron 55.0%
! TCCCCGGTGCCAATTTCCAT+GGG + chr1_4:2173324-2173343 Msa0143280:intron 55.0%
AGCCCATGGAAATTGGCACC+GGG - chr1_4:2173329-2173348 None:intergenic 55.0%
TGGGGCTCACTGAATCATGC+AGG - chr1_4:2173855-2173874 None:intergenic 55.0%
GGCTTGGACCCTAGACCTTA+AGG + chr1_4:2174668-2174687 Msa0143280:three_prime_UTR 55.0%
ACGTCGCTGTGAGAGAGAGG+TGG - chr1_4:2171288-2171307 None:intergenic 60.0%
CCAACCAACCAAACCCCTGG+GGG - chr1_4:2171871-2171890 None:intergenic 60.0%
GCCAACCAACCAAACCCCTG+GGG - chr1_4:2171872-2171891 None:intergenic 60.0%
GGCCAACCAACCAAACCCCT+GGG - chr1_4:2171873-2171892 None:intergenic 60.0%
AGGCCAACCAACCAAACCCC+TGG - chr1_4:2171874-2171893 None:intergenic 60.0%
TGCGCTCCTCTCAGCGTCTT+AGG + chr1_4:2173293-2173312 Msa0143280:intron 60.0%
! CTCCCCGGTGCCAATTTCCA+TGG + chr1_4:2173323-2173342 Msa0143280:intron 60.0%
GCCCATGGAAATTGGCACCG+GGG - chr1_4:2173328-2173347 None:intergenic 60.0%
! CCCCCAGGGGTTTGGTTGGT+TGG + chr1_4:2171868-2171887 Msa0143280:intron 65.0%
TGGGCCCCGCTAGTAGACGA+TGG + chr1_4:2171996-2172015 Msa0143280:intron 65.0%
GGGCCCCGCTAGTAGACGAT+GGG + chr1_4:2171997-2172016 Msa0143280:intron 65.0%
! GCTGAGAGGAGCGCACTGCA+AGG - chr1_4:2173288-2173307 None:intergenic 65.0%
! GGTCTAGGGTCCAAGCCCTG+TGG - chr1_4:2174665-2174684 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 2170963 2174788 2170963 ID=Msa0143280;Name=Msa0143280
chr1_4 mRNA 2170963 2174788 2170963 ID=Msa0143280-mRNA-1;Parent=Msa0143280;Name=Msa0143280-mRNA-1;_AED=0.17;_eAED=0.17;_QI=102|0.85|1|1|0.85|0.75|8|280|274
chr1_4 exon 2170963 2171305 2170963 ID=Msa0143280-mRNA-1:exon:837;Parent=Msa0143280-mRNA-1
chr1_4 exon 2171401 2171487 2171401 ID=Msa0143280-mRNA-1:exon:838;Parent=Msa0143280-mRNA-1
chr1_4 exon 2171575 2171645 2171575 ID=Msa0143280-mRNA-1:exon:839;Parent=Msa0143280-mRNA-1
chr1_4 exon 2172611 2172715 2172611 ID=Msa0143280-mRNA-1:exon:840;Parent=Msa0143280-mRNA-1
chr1_4 exon 2173432 2173567 2173432 ID=Msa0143280-mRNA-1:exon:841;Parent=Msa0143280-mRNA-1
chr1_4 exon 2174096 2174205 2174096 ID=Msa0143280-mRNA-1:exon:842;Parent=Msa0143280-mRNA-1
chr1_4 exon 2174305 2174409 2174305 ID=Msa0143280-mRNA-1:exon:843;Parent=Msa0143280-mRNA-1
chr1_4 exon 2174539 2174788 2174539 ID=Msa0143280-mRNA-1:exon:844;Parent=Msa0143280-mRNA-1
chr1_4 five_prime_UTR 2170963 2171064 2170963 ID=Msa0143280-mRNA-1:five_prime_utr;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2171065 2171305 2171065 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2171401 2171487 2171401 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2171575 2171645 2171575 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2172611 2172715 2172611 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2173432 2173567 2173432 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2174096 2174205 2174096 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 CDS 2174305 2174379 2174305 ID=Msa0143280-mRNA-1:cds;Parent=Msa0143280-mRNA-1
chr1_4 three_prime_UTR 2174380 2174409 2174380 ID=Msa0143280-mRNA-1:three_prime_utr;Parent=Msa0143280-mRNA-1
chr1_4 three_prime_UTR 2174539 2174788 2174539 ID=Msa0143280-mRNA-1:three_prime_utr;Parent=Msa0143280-mRNA-1
Gene Sequence

>Msa0143280

ATGAACCAAGCACATTCAATTCCCAAAATAAACATGGTAATTCCTCTTTGCAACCCTTGTATTTCATTTCAATCAACCTCGATTCATCATGGAAAACCTAACAAGAAAGTTGTATCTATTACCAACTCTGCATCTTCTAGCAACAGAGTAAGCACCCAGCGAAGAACCATGTCAGCATTCGAAGCTCGAATCTCACTCATTTTCGCTCTCGCTTCTCAATCCACCTCTCTCTCACAGCGACTTGTTGCCGATGCCGTTACTGAGACTGCAAAGTACTTGTTTCCAAAAAGATTTGAAAGCCGTACTCTCGAAGAAGCGTTCATGACAGTTCCGGACCTTGAGACTGTCAAGTTCAAAGTTCTAACTAGAAGGGACCAGTATGAAATTAGGGAAATTGAGAATACAACGGAGGAGAAAATGGAGATGACTACACCTGTTTTTACCAGTAAGAATCAATCTGACGGGGTTAAAATGGATATGACAACTCCCGTGTTAACAACAAAGACTGGAGATAAAGATGAGTGGAAAATGTCTTTTGTCATGCCTTCAAAGTACGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGACAATTAAAGAGGTGGCCAGAAAAATAGTTGCTGTGGTTTCCTTTTCAGGTTTTGTAAATGATGAAGAAGTTAAGAGGCGTGAATCGAAACTAAGAGAAGCCATGAAAAATGACGGACAGTTCAAAATTAAAGAGGGAACTTCAGTAGAAATTGCACAGTATAATCCCCCATTTTCTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAGTGGAAAAACAAGTAG

Protein sequence

>Msa0143280

MNQAHSIPKINMVIPLCNPCISFQSTSIHHGKPNKKVVSITNSASSSNRVSTQRRTMSAFEARISLIFALASQSTSLSQRLVADAVTETAKYLFPKRFESRTLEEAFMTVPDLETVKFKVLTRRDQYEIREIENTTEEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKTGDKDEWKMSFVMPSKYGANLPLPKDSSVTIKEVARKIVAVVSFSGFVNDEEVKRRESKLREAMKNDGQFKIKEGTSVEIAQYNPPFSLPFQRRNEIALEVEWKNK*