Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0047280 | 0.804803 | 1.812339e-49 | -8.615850e-47 |
| Msa0014710 | Msa0047280 | 0.804953 | 1.686432e-49 | -8.615850e-47 |
| Msa0015140 | Msa0047280 | 0.808352 | 3.230186e-50 | -8.615850e-47 |
| Msa0015680 | Msa0047280 | 0.815828 | 7.567928e-52 | -8.615850e-47 |
| Msa0026150 | Msa0047280 | 0.817269 | 3.598633e-52 | -8.615850e-47 |
| Msa0030280 | Msa0047280 | 0.807100 | 5.960692e-50 | -8.615850e-47 |
| Msa0043500 | Msa0047280 | 0.807659 | 4.536200e-50 | -8.615850e-47 |
| Msa0043650 | Msa0047280 | 0.804866 | 1.758612e-49 | -8.615850e-47 |
| Msa0047280 | Msa0053700 | 0.827475 | 1.532936e-54 | -8.615850e-47 |
| Msa0047280 | Msa0065010 | 0.833537 | 5.039139e-56 | -8.615850e-47 |
| Msa0047280 | Msa0070170 | 0.808243 | 3.408779e-50 | -8.615850e-47 |
| Msa0047280 | Msa0070960 | 0.852511 | 4.399821e-61 | -8.615850e-47 |
| Msa0047280 | Msa0100800 | 0.820616 | 6.242333e-53 | -8.615850e-47 |
| Msa0047280 | Msa0108870 | 0.832696 | 8.158331e-56 | -8.615850e-47 |
| Msa0047280 | Msa0126770 | 0.807249 | 5.543587e-50 | -8.615850e-47 |
| Msa0047280 | Msa0139990 | 0.977385 | 1.125065e-143 | -8.615850e-47 |
| Msa0047280 | Msa0140960 | 0.810139 | 1.336890e-50 | -8.615850e-47 |
| Msa0047280 | Msa0150260 | 0.800805 | 1.213033e-48 | -8.615850e-47 |
| Msa0047280 | Msa0155330 | 0.802141 | 6.457375e-49 | -8.615850e-47 |
| Msa0047280 | Msa0161410 | 0.801040 | 1.086041e-48 | -8.615850e-47 |
| Msa0047280 | Msa0164370 | 0.820530 | 6.532114e-53 | -8.615850e-47 |
| Msa0047280 | Msa0170410 | 0.806212 | 9.177259e-50 | -8.615850e-47 |
| Msa0047280 | Msa0171140 | 0.800348 | 1.503057e-48 | -8.615850e-47 |
| Msa0047280 | Msa0171850 | 0.810376 | 1.188631e-50 | -8.615850e-47 |
| Msa0047280 | Msa0173170 | 0.801561 | 8.497072e-49 | -8.615850e-47 |
| Msa0047280 | Msa0183460 | 0.803461 | 3.447955e-49 | -8.615850e-47 |
| Msa0047280 | Msa0193600 | 0.811386 | 7.183799e-51 | -8.615850e-47 |
| Msa0047280 | Msa0226460 | 0.805176 | 1.514408e-49 | -8.615850e-47 |
| Msa0047280 | Msa0251770 | 0.806921 | 6.503277e-50 | -8.615850e-47 |
| Msa0047280 | Msa0259160 | 0.802202 | 6.273306e-49 | -8.615850e-47 |
| Msa0047280 | Msa0271860 | 0.804857 | 1.766278e-49 | -8.615850e-47 |
| Msa0047280 | Msa0273650 | 0.809686 | 1.673845e-50 | -8.615850e-47 |
| Msa0047280 | Msa0279780 | 0.802429 | 5.634437e-49 | -8.615850e-47 |
| Msa0047280 | Msa0291520 | 0.814674 | 1.365762e-51 | -8.615850e-47 |
| Msa0047280 | Msa0306710 | 0.810263 | 1.257406e-50 | -8.615850e-47 |
| Msa0047280 | Msa0310830 | 0.807143 | 5.836043e-50 | -8.615850e-47 |
| Msa0047280 | Msa0311060 | 0.825595 | 4.303508e-54 | -8.615850e-47 |
| Msa0047280 | Msa0322590 | 0.805962 | 1.036042e-49 | -8.615850e-47 |
| Msa0047280 | Msa0337510 | 0.834636 | 2.672608e-56 | -8.615850e-47 |
| Msa0047280 | Msa0341170 | 0.801027 | 1.092980e-48 | -8.615850e-47 |
| Msa0047280 | Msa0358510 | 0.805622 | 1.221302e-49 | -8.615850e-47 |
| Msa0047280 | Msa0364990 | 0.800972 | 1.121592e-48 | -8.615850e-47 |
| Msa0047280 | Msa0394690 | 0.810352 | 1.203168e-50 | -8.615850e-47 |
| Msa0047280 | Msa0414020 | 0.837906 | 3.942187e-57 | -8.615850e-47 |
| Msa0047280 | Msa0431770 | 0.859712 | 3.420558e-63 | -8.615850e-47 |
| Msa0047280 | Msa0436200 | 0.808250 | 3.396844e-50 | -8.615850e-47 |
| Msa0047280 | Msa0439890 | 0.800274 | 1.556288e-48 | -8.615850e-47 |
| Msa0047280 | Msa0466250 | 0.804560 | 2.037415e-49 | -8.615850e-47 |
| Msa0047280 | Msa0515640 | 0.842149 | 3.083668e-58 | -8.615850e-47 |
| Msa0047280 | Msa0539050 | 0.815439 | 9.241649e-52 | -8.615850e-47 |
| Msa0047280 | Msa0539060 | 0.828510 | 8.638271e-55 | -8.615850e-47 |
| Msa0047280 | Msa0542160 | 0.814857 | 1.244026e-51 | -8.615850e-47 |
| Msa0047280 | Msa0547700 | 0.805092 | 1.576931e-49 | -8.615850e-47 |
| Msa0047280 | Msa0549590 | 0.811761 | 5.956779e-51 | -8.615850e-47 |
| Msa0047280 | Msa0550570 | 0.801472 | 8.858845e-49 | -8.615850e-47 |
| Msa0047280 | Msa0556010 | 0.801339 | 9.433023e-49 | -8.615850e-47 |
| Msa0047280 | Msa0567240 | 0.802820 | 4.678502e-49 | -8.615850e-47 |
| Msa0047280 | Msa0594710 | 0.809939 | 1.476903e-50 | -8.615850e-47 |
| Msa0047280 | Msa0609000 | 0.801950 | 7.070913e-49 | -8.615850e-47 |
| Msa0047280 | Msa0619180 | 0.806841 | 6.762720e-50 | -8.615850e-47 |
| Msa0047280 | Msa0619920 | 0.837553 | 4.857099e-57 | -8.615850e-47 |
| Msa0047280 | Msa0638350 | 0.800540 | 1.373899e-48 | -8.615850e-47 |
| Msa0047280 | Msa0643700 | 0.826024 | 3.404462e-54 | -8.615850e-47 |
| Msa0047280 | Msa0644660 | 0.822803 | 1.948369e-53 | -8.615850e-47 |
| Msa0047280 | Msa0646130 | 0.809748 | 1.623133e-50 | -8.615850e-47 |
| Msa0047280 | Msa0647430 | 0.813137 | 2.980056e-51 | -8.615850e-47 |
| Msa0047280 | Msa0652300 | 0.801825 | 7.501409e-49 | -8.615850e-47 |
| Msa0047280 | Msa0659990 | 0.802910 | 4.484053e-49 | -8.615850e-47 |
| Msa0047280 | Msa0691690 | 0.801869 | 7.345423e-49 | -8.615850e-47 |
| Msa0047280 | Msa0704800 | 0.814479 | 1.509001e-51 | -8.615850e-47 |
| Msa0047280 | Msa0706390 | 0.804646 | 1.954378e-49 | -8.615850e-47 |
| Msa0047280 | Msa0733890 | 0.803496 | 3.391595e-49 | -8.615850e-47 |
| Msa0047280 | Msa0758230 | 0.813258 | 2.802923e-51 | -8.615850e-47 |
| Msa0047280 | Msa0764690 | 0.807040 | 6.138213e-50 | -8.615850e-47 |
| Msa0047280 | Msa0794050 | 0.810533 | 1.099545e-50 | -8.615850e-47 |
| Msa0047280 | Msa0795660 | 0.821457 | 3.996386e-53 | -8.615850e-47 |
| Msa0047280 | Msa0814250 | 0.800059 | 1.721635e-48 | -8.615850e-47 |
| Msa0047280 | Msa0818170 | 0.808432 | 3.105548e-50 | -8.615850e-47 |
| Msa0047280 | Msa0818770 | 0.801498 | 8.752751e-49 | -8.615850e-47 |
| Msa0047280 | Msa0821680 | 0.818650 | 1.754849e-52 | -8.615850e-47 |
| Msa0047280 | Msa0822170 | 0.806793 | 6.923440e-50 | -8.615850e-47 |
| Msa0047280 | Msa0832040 | 0.806241 | 9.049360e-50 | -8.615850e-47 |
| Msa0047280 | Msa0832050 | 0.821305 | 4.334309e-53 | -8.615850e-47 |
| Msa0047280 | Msa0869010 | 0.809437 | 1.892840e-50 | -8.615850e-47 |
| Msa0047280 | Msa0885880 | 0.814234 | 1.709286e-51 | -8.615850e-47 |
| Msa0047280 | Msa0888940 | 0.829080 | 6.287493e-55 | -8.615850e-47 |
| Msa0047280 | Msa0888990 | 0.804978 | 1.666689e-49 | -8.615850e-47 |
| Msa0047280 | Msa0894920 | 0.828005 | 1.143512e-54 | -8.615850e-47 |
| Msa0047280 | Msa0895310 | 0.800676 | 1.288790e-48 | -8.615850e-47 |
| Msa0047280 | Msa0898760 | 0.801299 | 9.614091e-49 | -8.615850e-47 |
| Msa0047280 | Msa0898890 | 0.818383 | 2.017270e-52 | -8.615850e-47 |
| Msa0047280 | Msa0928120 | 0.814563 | 1.445324e-51 | -8.615850e-47 |
| Msa0047280 | Msa0943170 | 0.805482 | 1.306708e-49 | -8.615850e-47 |
| Msa0047280 | Msa0944200 | 0.802060 | 6.710897e-49 | -8.615850e-47 |
| Msa0047280 | Msa0944610 | 0.806619 | 7.534331e-50 | -8.615850e-47 |
| Msa0047280 | Msa0944660 | 0.809140 | 2.192349e-50 | -8.615850e-47 |
| Msa0047280 | Msa0970320 | 0.802871 | 4.566600e-49 | -8.615850e-47 |
| Msa0047280 | Msa0973320 | 0.817672 | 2.920245e-52 | -8.615850e-47 |
| Msa0047280 | Msa0976330 | 0.830904 | 2.258651e-55 | -8.615850e-47 |
| Msa0047280 | Msa0980940 | 0.801760 | 7.732304e-49 | -8.615850e-47 |
| Msa0047280 | Msa1000930 | 0.815855 | 7.465205e-52 | -8.615850e-47 |
| Msa0047280 | Msa1004420 | 0.821489 | 3.929192e-53 | -8.615850e-47 |
| Msa0047280 | Msa1030930 | 0.814426 | 1.550210e-51 | -8.615850e-47 |
| Msa0047280 | Msa1050420 | 0.820713 | 5.929766e-53 | -8.615850e-47 |
| Msa0047280 | Msa1051600 | 0.800016 | 1.756570e-48 | -8.615850e-47 |
| Msa0047280 | Msa1070050 | 0.805326 | 1.408840e-49 | -8.615850e-47 |
| Msa0047280 | Msa1070390 | 0.800145 | 1.653692e-48 | -8.615850e-47 |
| Msa0047280 | Msa1071530 | 0.975117 | 2.279599e-139 | -8.615850e-47 |
| Msa0047280 | Msa1080310 | 0.838397 | 2.946266e-57 | -8.615850e-47 |
| Msa0047280 | Msa1093330 | 0.802294 | 6.007435e-49 | -8.615850e-47 |
| Msa0047280 | Msa1113590 | 0.815996 | 6.941714e-52 | -8.615850e-47 |
| Msa0047280 | Msa1126850 | 0.806393 | 8.408437e-50 | -8.615850e-47 |
| Msa0047280 | Msa1163540 | 0.805049 | 1.610038e-49 | -8.615850e-47 |
| Msa0047280 | Msa1173900 | 0.811727 | 6.058747e-51 | -8.615850e-47 |
| Msa0047280 | Msa1186530 | 0.800014 | 1.757993e-48 | -8.615850e-47 |
| Msa0047280 | Msa1199290 | 0.801465 | 8.890504e-49 | -8.615850e-47 |
| Msa0047280 | Msa1211050 | -0.802145 | 6.447271e-49 | -8.615850e-47 |
| Msa0047280 | Msa1213770 | 0.810491 | 1.122934e-50 | -8.615850e-47 |
| Msa0047280 | Msa1223330 | 0.807164 | 5.777202e-50 | -8.615850e-47 |
| Msa0047280 | Msa1253810 | 0.851468 | 8.703834e-61 | -8.615850e-47 |
| Msa0047280 | Msa1271580 | 0.809892 | 1.511790e-50 | -8.615850e-47 |
| Msa0047280 | Msa1286510 | 0.800057 | 1.722761e-48 | -8.615850e-47 |
| Msa0047280 | Msa1286550 | 0.801743 | 7.795378e-49 | -8.615850e-47 |
| Msa0047280 | Msa1289300 | 0.814799 | 1.281399e-51 | -8.615850e-47 |
| Msa0047280 | Msa1297600 | 0.817352 | 3.447516e-52 | -8.615850e-47 |
| Msa0047280 | Msa1306760 | 0.810833 | 9.468077e-51 | -8.615850e-47 |
| Msa0047280 | Msa1307600 | 0.804534 | 2.062870e-49 | -8.615850e-47 |
| Msa0047280 | Msa1323990 | 0.955579 | 2.189678e-113 | -8.615850e-47 |
| Msa0047280 | Msa1329450 | 0.813766 | 2.167940e-51 | -8.615850e-47 |
| Msa0047280 | Msa1372310 | 0.805645 | 1.207965e-49 | -8.615850e-47 |
| Msa0047280 | Msa1396940 | 0.802090 | 6.616276e-49 | -8.615850e-47 |
| Msa0047280 | Msa1397940 | 0.824435 | 8.084474e-54 | -8.615850e-47 |
| Msa0047280 | Msa1421620 | 0.877536 | 5.808314e-69 | -8.615850e-47 |
| Msa0047280 | Msa1437270 | 0.804102 | 2.538197e-49 | -8.615850e-47 |
| Msa0047280 | Msa1454450 | 0.803674 | 3.114546e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGTGATAATTTGTATTA+TGG | 0.130227 | 1_1:-80063664 | None:intergenic |
| GGTTCCTCCTTCAAGAATTC+TGG | 0.172529 | 1_1:+80064093 | Msa0047280:three_prime_UTR |
| TTCCCTCATGTAGTATTTAA+AGG | 0.173459 | 1_1:-80064394 | None:intergenic |
| TTACAATGATAATGTGTATT+TGG | 0.176865 | 1_1:-80061917 | None:intergenic |
| ATTAAACTTGGAAATGAATT+AGG | 0.210390 | 1_1:+80061118 | Msa0047280:five_prime_UTR |
| TAATTCATTTCCAAGTTTAA+TGG | 0.234342 | 1_1:-80061116 | None:intergenic |
| CAGAATTTGCAGTGCAGCGC+AGG | 0.294148 | 1_1:-80064485 | None:intergenic |
| TAATTATAAATATAATTGTT+AGG | 0.307154 | 1_1:+80063980 | Msa0047280:three_prime_UTR |
| AGATAAGATTATAAAAGTTC+AGG | 0.343347 | 1_1:+80061032 | Msa0047280:five_prime_UTR |
| ACAGTGATAATTTGTATTAT+GGG | 0.354259 | 1_1:-80063663 | None:intergenic |
| GACTCTGCATAAGACAATAA+TGG | 0.355828 | 1_1:+80063947 | Msa0047280:three_prime_UTR |
| AGACAATTCCGCAAAGCGTT+TGG | 0.379036 | 1_1:-80063577 | None:intergenic |
| CAAAATGATGCCATTAAACT+TGG | 0.402093 | 1_1:+80061106 | Msa0047280:five_prime_UTR |
| TAGTACAAAACAGAGGTATA+TGG | 0.414342 | 1_1:-80063903 | None:intergenic |
| CGAAAGAGCCTTGGAGAGAA+AGG | 0.423381 | 1_1:+80064418 | Msa0047280:three_prime_UTR |
| AGAAAGAGCCTTGGAGAGAA+AGG | 0.426750 | 1_1:+80064461 | Msa0047280:three_prime_UTR |
| ACTCTGCATAAGACAATAAT+GGG | 0.428670 | 1_1:+80063948 | Msa0047280:three_prime_UTR |
| GCCAGATTGTATGTCAGATA+TGG | 0.437535 | 1_1:-80060875 | None:intergenic |
| GCCTTCATACTGCTTTCTGC+TGG | 0.438656 | 1_1:+80064067 | Msa0047280:three_prime_UTR |
| AATTATAAATATAATTGTTA+GGG | 0.440124 | 1_1:+80063981 | Msa0047280:three_prime_UTR |
| GTTCCTCCTTCAAGAATTCT+GGG | 0.442364 | 1_1:+80064094 | Msa0047280:three_prime_UTR |
| AAATACAGCTATAGCAGAAA+AGG | 0.446789 | 1_1:-80060843 | None:intergenic |
| TTGTCTCCCAGAATTCTTGA+AGG | 0.447191 | 1_1:-80064100 | None:intergenic |
| GCTGCTATCCAAACGCTTTG+CGG | 0.447265 | 1_1:+80063569 | Msa0047280:CDS |
| CTCAAGCTTGTTGCATATGT+TGG | 0.452344 | 1_1:+80062852 | Msa0047280:CDS |
| CAACTAAGAGCTTATCTCAT+TGG | 0.455962 | 1_1:-80064217 | None:intergenic |
| CAGGAGAGCACGTGTCTTTG+TGG | 0.456160 | 1_1:+80061051 | Msa0047280:five_prime_UTR |
| TTGGAGAGAAAGGAAGGGCT+TGG | 0.464845 | 1_1:+80064428 | Msa0047280:three_prime_UTR |
| GGCTACTCTTCCTTCCTGCC+AGG | 0.465761 | 1_1:-80061081 | None:intergenic |
| AAAGAGCTACCGTGTAGGTC+AGG | 0.490343 | 1_1:-80060796 | None:intergenic |
| AAGCCCTTCCTTTCTCTCCA+AGG | 0.495149 | 1_1:-80064426 | None:intergenic |
| TTTGCGGAATTGTCTGATGA+AGG | 0.504707 | 1_1:+80063585 | Msa0047280:CDS |
| CTTCATCTCATAGTTTCTCA+AGG | 0.506698 | 1_1:-80061842 | None:intergenic |
| TGAGGGAAGCGAAAGAGCCT+TGG | 0.511561 | 1_1:+80064409 | Msa0047280:three_prime_UTR |
| GCCATATCTGACATACAATC+TGG | 0.513874 | 1_1:+80060874 | Msa0047280:five_prime_UTR |
| CGTTTGGATAGCAGCCAAGC+AGG | 0.516208 | 1_1:-80063561 | None:intergenic |
| CTTGAGAAACTATGAGATGA+AGG | 0.518610 | 1_1:+80061843 | Msa0047280:exon |
| GCGCAGGGCCTTTCTCTCCA+AGG | 0.526608 | 1_1:-80064469 | None:intergenic |
| TGTCTTTGTGGAAGTAGTCC+TGG | 0.529821 | 1_1:+80061063 | Msa0047280:five_prime_UTR |
| TTGCCTTTAAATACTACATG+AGG | 0.534140 | 1_1:+80064391 | Msa0047280:three_prime_UTR |
| GCGTGAGAGAGAAAGAGCCT+TGG | 0.539498 | 1_1:+80064452 | Msa0047280:three_prime_UTR |
| GCAGAAAAGGCCTTAAAATG+TGG | 0.539910 | 1_1:-80060830 | None:intergenic |
| AGAGCCTTGGAGAGAAAGGA+AGG | 0.541262 | 1_1:+80064422 | Msa0047280:three_prime_UTR |
| GCCAGCAGAAAGCAGTATGA+AGG | 0.568670 | 1_1:-80064068 | None:intergenic |
| AGAATTTGCAGTGCAGCGCA+GGG | 0.576307 | 1_1:-80064484 | None:intergenic |
| CAGAAAAGGCCTTAAAATGT+GGG | 0.578792 | 1_1:-80060829 | None:intergenic |
| CATACTGCTTTCTGCTGGCG+TGG | 0.581915 | 1_1:+80064072 | Msa0047280:three_prime_UTR |
| TTTGTGGAAGTAGTCCTGGC+AGG | 0.584999 | 1_1:+80061067 | Msa0047280:five_prime_UTR |
| CAAAATGTGATGGCAAGGCA+AGG | 0.585482 | 1_1:+80064365 | Msa0047280:three_prime_UTR |
| AGAGGCATAAAGTTGCATGA+TGG | 0.590712 | 1_1:+80064126 | Msa0047280:three_prime_UTR |
| TCTCCCAGAATTCTTGAAGG+AGG | 0.595273 | 1_1:-80064097 | None:intergenic |
| TGGAAGTAGTCCTGGCAGGA+AGG | 0.600387 | 1_1:+80061071 | Msa0047280:five_prime_UTR |
| CTTTATATTCCTGACCTACA+CGG | 0.609660 | 1_1:+80060787 | Msa0047280:five_prime_UTR |
| TGCCTTTAAATACTACATGA+GGG | 0.610711 | 1_1:+80064392 | Msa0047280:three_prime_UTR |
| GCTTGCAAAATGTGATGGCA+AGG | 0.615832 | 1_1:+80064360 | Msa0047280:three_prime_UTR |
| ATCACATCTGCAGATTTGTG+TGG | 0.619954 | 1_1:-80063610 | None:intergenic |
| ACAAATCTGCAGATGTGATG+AGG | 0.630753 | 1_1:+80063614 | Msa0047280:CDS |
| GAGCCTTGGAGAGAAAGGAA+GGG | 0.646139 | 1_1:+80064423 | Msa0047280:three_prime_UTR |
| AGCTGTCAAAGCTACTGATG+AGG | 0.663227 | 1_1:+80061866 | Msa0047280:CDS |
| AAAACAAAGAGCTACCGTGT+AGG | 0.675010 | 1_1:-80060801 | None:intergenic |
| AATTCTGGGAGACAAAGAAG+AGG | 0.676675 | 1_1:+80064108 | Msa0047280:three_prime_UTR |
| ACATTCTTAGTACAAAACAG+AGG | 0.764301 | 1_1:-80063910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTTAAATTATTTAAT+TGG | + | chr1_1:80063058-80063077 | Msa0047280:intron | 0.0% |
| !!! | ATTAATTTTATTAATTTTAT+TGG | + | chr1_1:80063425-80063444 | Msa0047280:intron | 0.0% |
| !!! | ATTGGTAAAATTATAATTTT+TGG | + | chr1_1:80062250-80062269 | Msa0047280:intron | 10.0% |
| !! | GAAATAAAATGAAAAAAATT+TGG | - | chr1_1:80062418-80062437 | None:intergenic | 10.0% |
| !! | AAACATAGTTTGAAAAAAAA+GGG | - | chr1_1:80060900-80060919 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATCTGTTTTTTG+TGG | + | chr1_1:80061172-80061191 | Msa0047280:intron | 15.0% |
| !! | TATTTCAATTGTTAAATGAA+AGG | - | chr1_1:80061683-80061702 | None:intergenic | 15.0% |
| !! | TGAAGCAAAAATTAATAAAA+TGG | + | chr1_1:80061736-80061755 | Msa0047280:intron | 15.0% |
| !!! | ATTTAATTTAAATATGTGTG+TGG | - | chr1_1:80063044-80063063 | None:intergenic | 15.0% |
| !! | ATTGGTAAAATTATAATTTC+TGG | + | chr1_1:80063466-80063485 | Msa0047280:intron | 15.0% |
| !!! | TATTATTTTTAACTTGCAAT+TGG | + | chr1_1:80063796-80063815 | Msa0047280:three_prime_UTR | 15.0% |
| !! | CAAACATAGTTTGAAAAAAA+AGG | - | chr1_1:80060901-80060920 | None:intergenic | 20.0% |
| !!! | TTTGTAACATTTTTTAGCTA+TGG | - | chr1_1:80060927-80060946 | None:intergenic | 20.0% |
| !! | AGATAAGATTATAAAAGTTC+AGG | + | chr1_1:80061032-80061051 | Msa0047280:five_prime_UTR | 20.0% |
| !! | TAATTCATTTCCAAGTTTAA+TGG | - | chr1_1:80061119-80061138 | None:intergenic | 20.0% |
| !! | ATTAAACTTGGAAATGAATT+AGG | + | chr1_1:80061118-80061137 | Msa0047280:five_prime_UTR | 20.0% |
| !!! | TTACAATGATAATGTGTATT+TGG | - | chr1_1:80061920-80061939 | None:intergenic | 20.0% |
| !!! | TATTATTTTTAGCTTGCAAT+TGG | + | chr1_1:80062087-80062106 | Msa0047280:intron | 20.0% |
| !!! | AAAAATGGGTAATGTTTTTT+CGG | + | chr1_1:80062295-80062314 | Msa0047280:intron | 20.0% |
| !! | ATTCAATTGATGAAATGAAA+AGG | - | chr1_1:80062576-80062595 | None:intergenic | 20.0% |
| !! | AGAAGTTTGAACAAATAAAT+CGG | - | chr1_1:80063014-80063033 | None:intergenic | 20.0% |
| !! | AACATGATTAACCATTATAA+TGG | + | chr1_1:80063192-80063211 | Msa0047280:intron | 20.0% |
| !! | TTATATGTAAGGAAAATATG+AGG | - | chr1_1:80063309-80063328 | None:intergenic | 20.0% |
| !! | TCATTCAATCATTATATGTA+AGG | - | chr1_1:80063320-80063339 | None:intergenic | 20.0% |
| !!! | ACAGTGATAATTTGTATTAT+GGG | - | chr1_1:80063666-80063685 | None:intergenic | 20.0% |
| !!! | TACAGTGATAATTTGTATTA+TGG | - | chr1_1:80063667-80063686 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCCCACATTTTA+AGG | + | chr1_1:80060820-80060839 | Msa0047280:five_prime_UTR | 25.0% |
| !! | CAAAACTCAAAGTATTAACA+AGG | - | chr1_1:80061362-80061381 | None:intergenic | 25.0% |
| !! | AGAATTTGAGTTAAAGTCAA+AGG | - | chr1_1:80061451-80061470 | None:intergenic | 25.0% |
| ! | TTTGTTACACAAAGTTTCAT+GGG | - | chr1_1:80061494-80061513 | None:intergenic | 25.0% |
| !! | AAGTTTTCAAAAGATGGTTA+TGG | + | chr1_1:80061550-80061569 | Msa0047280:intron | 25.0% |
| !! | ATAAGATATTAGCTTCAACA+AGG | - | chr1_1:80061779-80061798 | None:intergenic | 25.0% |
| ! | TTGTTGAAGCTAATATCTTA+TGG | + | chr1_1:80061778-80061797 | Msa0047280:intron | 25.0% |
| ! | TACTAGGAGAGTTTATTATA+AGG | - | chr1_1:80062153-80062172 | None:intergenic | 25.0% |
| !!! | TAATTTTTGGAGACATCTTA+TGG | + | chr1_1:80062263-80062282 | Msa0047280:intron | 25.0% |
| !!! | TTATGGATTAGACAGAAAAA+TGG | + | chr1_1:80062280-80062299 | Msa0047280:intron | 25.0% |
| !!! | TATGGATTAGACAGAAAAAT+GGG | + | chr1_1:80062281-80062300 | Msa0047280:intron | 25.0% |
| !! | AAAAATTTGGATACCCATTT+TGG | - | chr1_1:80062405-80062424 | None:intergenic | 25.0% |
| ! | TATTCATCGTTATCAAAAGA+AGG | - | chr1_1:80062459-80062478 | None:intergenic | 25.0% |
| !!! | TTAATACATTGTTTTGCCTT+TGG | + | chr1_1:80062709-80062728 | Msa0047280:intron | 25.0% |
| ! | AGAAAATAAACTCAAAGTGA+AGG | - | chr1_1:80062764-80062783 | None:intergenic | 25.0% |
| !!! | AAGTTTTCAAATGTTGGTTA+TGG | + | chr1_1:80063137-80063156 | Msa0047280:intron | 25.0% |
| !! | TACTATGAGAGTTTTCTATA+AGG | - | chr1_1:80063247-80063266 | None:intergenic | 25.0% |
| ! | CAATTGTAGAGTATGAAAAA+TGG | + | chr1_1:80064269-80064288 | Msa0047280:three_prime_UTR | 25.0% |
| !!! | GTAAAAAGAAGCATAGATTT+TGG | + | chr1_1:80064338-80064357 | Msa0047280:three_prime_UTR | 25.0% |
| AAATACAGCTATAGCAGAAA+AGG | - | chr1_1:80060846-80060865 | None:intergenic | 30.0% | |
| AGACGATTTACAAATAGTCT+TGG | - | chr1_1:80060956-80060975 | None:intergenic | 30.0% | |
| ! | ATCGTCTTTTGTGAAACTTT+TGG | + | chr1_1:80060969-80060988 | Msa0047280:intron | 30.0% |
| ! | GTTTAATGGCATCATTTTGA+TGG | - | chr1_1:80061105-80061124 | None:intergenic | 30.0% |
| CAAAATGATGCCATTAAACT+TGG | + | chr1_1:80061106-80061125 | Msa0047280:five_prime_UTR | 30.0% | |
| !!! | TTATCTGTTTTTTGTGGAAG+AGG | + | chr1_1:80061178-80061197 | Msa0047280:intron | 30.0% |
| TTCAGAAGCAATGTTGTAAA+GGG | - | chr1_1:80061414-80061433 | None:intergenic | 30.0% | |
| ATTCAGAAGCAATGTTGTAA+AGG | - | chr1_1:80061415-80061434 | None:intergenic | 30.0% | |
| ! | GTTTGTTACACAAAGTTTCA+TGG | - | chr1_1:80061495-80061514 | None:intergenic | 30.0% |
| !! | CCATCTTTTGAAAACTTTTG+TGG | - | chr1_1:80061547-80061566 | None:intergenic | 30.0% |
| ! | CCACAAAAGTTTTCAAAAGA+TGG | + | chr1_1:80061544-80061563 | Msa0047280:intron | 30.0% |
| TTTAATCTACACAAATCTGC+AGG | + | chr1_1:80061814-80061833 | Msa0047280:intron | 30.0% | |
| AATGAGAAAGAACACAAAAG+TGG | - | chr1_1:80062018-80062037 | None:intergenic | 30.0% | |
| !!! | TTTTAGCTTGCAATTGGTTA+TGG | + | chr1_1:80062093-80062112 | Msa0047280:intron | 30.0% |
| TCTTACAATAGACACATGTT+TGG | + | chr1_1:80062223-80062242 | Msa0047280:intron | 30.0% | |
| ! | TAACGATGAATACCTTTTTC+CGG | + | chr1_1:80062467-80062486 | Msa0047280:intron | 30.0% |
| CAGTTATGAAAAAGGAATAC+CGG | - | chr1_1:80062489-80062508 | None:intergenic | 30.0% | |
| CACAAATTCCACATAATCAA+GGG | - | chr1_1:80062633-80062652 | None:intergenic | 30.0% | |
| TAAAAGCAATACAAAGCCAA+AGG | - | chr1_1:80062728-80062747 | None:intergenic | 30.0% | |
| AGTGTTGTAAAGGGAAAATT+TGG | - | chr1_1:80062946-80062965 | None:intergenic | 30.0% | |
| TTTGGAAGTAGTGTTGTAAA+GGG | - | chr1_1:80062955-80062974 | None:intergenic | 30.0% | |
| ATTTGGAAGTAGTGTTGTAA+AGG | - | chr1_1:80062956-80062975 | None:intergenic | 30.0% | |
| TACAACACTACTTCCAAATT+TGG | + | chr1_1:80062957-80062976 | Msa0047280:intron | 30.0% | |
| AAGGAAACAACAACCAAATT+TGG | - | chr1_1:80062973-80062992 | None:intergenic | 30.0% | |
| !! | TAAATCGGATTTTGAGTCAT+AGG | - | chr1_1:80062999-80063018 | None:intergenic | 30.0% |
| ! | GAAAACTTTTGAGCATATGT+TGG | - | chr1_1:80063125-80063144 | None:intergenic | 30.0% |
| ! | GCTCAAAAGTTTTCAAATGT+TGG | + | chr1_1:80063131-80063150 | Msa0047280:intron | 30.0% |
| AGGTATGGCAAAAGAAAAAT+TGG | - | chr1_1:80063227-80063246 | None:intergenic | 30.0% | |
| ! | TGAGAGTTTTCTATAAGGTA+TGG | - | chr1_1:80063242-80063261 | None:intergenic | 30.0% |
| GAAAATATGAGGAATCCAAA+AGG | - | chr1_1:80063298-80063317 | None:intergenic | 30.0% | |
| AGACACATGTTTAGTAACAT+TGG | + | chr1_1:80063448-80063467 | Msa0047280:intron | 30.0% | |
| !! | TTGATTGTTTTGTGCAGAAT+AGG | + | chr1_1:80063822-80063841 | Msa0047280:three_prime_UTR | 30.0% |
| !! | TGATTGTTTTGTGCAGAATA+GGG | + | chr1_1:80063823-80063842 | Msa0047280:three_prime_UTR | 30.0% |
| ! | TAGTACAAAACAGAGGTATA+TGG | - | chr1_1:80063906-80063925 | None:intergenic | 30.0% |
| ACATTCTTAGTACAAAACAG+AGG | - | chr1_1:80063913-80063932 | None:intergenic | 30.0% | |
| ACTCTGCATAAGACAATAAT+GGG | + | chr1_1:80063948-80063967 | Msa0047280:three_prime_UTR | 30.0% | |
| TTGCCTTTAAATACTACATG+AGG | + | chr1_1:80064391-80064410 | Msa0047280:three_prime_UTR | 30.0% | |
| TGCCTTTAAATACTACATGA+GGG | + | chr1_1:80064392-80064411 | Msa0047280:three_prime_UTR | 30.0% | |
| TTCCCTCATGTAGTATTTAA+AGG | - | chr1_1:80064397-80064416 | None:intergenic | 30.0% | |
| CTTTATATTCCTGACCTACA+CGG | + | chr1_1:80060787-80060806 | Msa0047280:five_prime_UTR | 35.0% | |
| CAGAAAAGGCCTTAAAATGT+GGG | - | chr1_1:80060832-80060851 | None:intergenic | 35.0% | |
| AATTCGTTGCAAACTTCAGT+TGG | + | chr1_1:80061243-80061262 | Msa0047280:intron | 35.0% | |
| ATTCGTTGCAAACTTCAGTT+GGG | + | chr1_1:80061244-80061263 | Msa0047280:intron | 35.0% | |
| TACAACATTGCTTCTGAATC+TGG | + | chr1_1:80061416-80061435 | Msa0047280:intron | 35.0% | |
| GACTAAGAGAGTCGATTAAA+AGG | - | chr1_1:80061610-80061629 | None:intergenic | 35.0% | |
| CTTCATCTCATAGTTTCTCA+AGG | - | chr1_1:80061845-80061864 | None:intergenic | 35.0% | |
| CTTGAGAAACTATGAGATGA+AGG | + | chr1_1:80061843-80061862 | Msa0047280:exon | 35.0% | |
| AGAAAGAACACAAAAGTGGA+AGG | - | chr1_1:80062014-80062033 | None:intergenic | 35.0% | |
| ! | TTCACGTTCACACTTTTACT+AGG | - | chr1_1:80062169-80062188 | None:intergenic | 35.0% |
| AAAAATATGCAGAGTCCAAG+AGG | - | chr1_1:80062204-80062223 | None:intergenic | 35.0% | |
| ! | AGACACATGTTTGGTAACAT+TGG | + | chr1_1:80062232-80062251 | Msa0047280:intron | 35.0% |
| !!! | ATTTTGGTTCGATTCTTGCA+TGG | - | chr1_1:80062389-80062408 | None:intergenic | 35.0% |
| ATGCAAGAATCGAACCAAAA+TGG | + | chr1_1:80062388-80062407 | Msa0047280:intron | 35.0% | |
| TGCAAGAATCGAACCAAAAT+GGG | + | chr1_1:80062389-80062408 | Msa0047280:intron | 35.0% | |
| GAAAAAGGAATACCGGAAAA+AGG | - | chr1_1:80062482-80062501 | None:intergenic | 35.0% | |
| CTATGCAGCAGTTATGAAAA+AGG | - | chr1_1:80062497-80062516 | None:intergenic | 35.0% | |
| CTTAATCATTATGATGCCCT+TGG | - | chr1_1:80062541-80062560 | None:intergenic | 35.0% | |
| ACGTTATTCCCTTGATTATG+TGG | + | chr1_1:80062622-80062641 | Msa0047280:intron | 35.0% | |
| CCACAAATTCCACATAATCA+AGG | - | chr1_1:80062634-80062653 | None:intergenic | 35.0% | |
| CCTTGATTATGTGGAATTTG+TGG | + | chr1_1:80062631-80062650 | Msa0047280:intron | 35.0% | |
| ! | TTTCTTTTGATCAGGTGGTT+AGG | + | chr1_1:80062828-80062847 | Msa0047280:intron | 35.0% |
| TGTTAGTGTTGCAAAGTTAG+AGG | + | chr1_1:80062918-80062937 | Msa0047280:intron | 35.0% | |
| !! | GATTTTGAGTCATAGGTCAA+AGG | - | chr1_1:80062992-80063011 | None:intergenic | 35.0% |
| ! | TAATTTCTGGAGACGTCTTA+TGG | + | chr1_1:80063479-80063498 | Msa0047280:intron | 35.0% |
| GACTCTGCATAAGACAATAA+TGG | + | chr1_1:80063947-80063966 | Msa0047280:three_prime_UTR | 35.0% | |
| CAACTAAGAGCTTATCTCAT+TGG | - | chr1_1:80064220-80064239 | None:intergenic | 35.0% | |
| !!! | TTTTGGCTTGCAAAATGTGA+TGG | + | chr1_1:80064355-80064374 | Msa0047280:three_prime_UTR | 35.0% |
| AAAACAAAGAGCTACCGTGT+AGG | - | chr1_1:80060804-80060823 | None:intergenic | 40.0% | |
| GCAGAAAAGGCCTTAAAATG+TGG | - | chr1_1:80060833-80060852 | None:intergenic | 40.0% | |
| GCCATATCTGACATACAATC+TGG | + | chr1_1:80060874-80060893 | Msa0047280:five_prime_UTR | 40.0% | |
| GCCAGATTGTATGTCAGATA+TGG | - | chr1_1:80060878-80060897 | None:intergenic | 40.0% | |
| ! | GAAACTTTTGGCATGTTTGC+AGG | + | chr1_1:80060981-80061000 | Msa0047280:intron | 40.0% |
| !!! | TCTGTTTTTTGTGGAAGAGG+TGG | + | chr1_1:80061181-80061200 | Msa0047280:intron | 40.0% |
| ! | TTTTGTGGAAGAGGTGGAAA+TGG | + | chr1_1:80061187-80061206 | Msa0047280:intron | 40.0% |
| TTCGTTGCAAACTTCAGTTG+GGG | + | chr1_1:80061245-80061264 | Msa0047280:intron | 40.0% | |
| ! | TTGATGCATCGTTTTGCCTT+TGG | + | chr1_1:80061298-80061317 | Msa0047280:intron | 40.0% |
| GAGCAGAAACACAAATCCAA+AGG | - | chr1_1:80061317-80061336 | None:intergenic | 40.0% | |
| !! | AAGGGATAATTTGCTACCTC+TGG | - | chr1_1:80061396-80061415 | None:intergenic | 40.0% |
| AGAGAGTCGATTAAAAGGCA+TGG | - | chr1_1:80061605-80061624 | None:intergenic | 40.0% | |
| GAATTCCATTGCATGCTTCT+AGG | + | chr1_1:80061643-80061662 | Msa0047280:intron | 40.0% | |
| GAATTCCATTGTATGCCTCT+TGG | + | chr1_1:80062186-80062205 | Msa0047280:intron | 40.0% | |
| ! | CTGCTGCATAGATCTTTTTG+TGG | + | chr1_1:80062506-80062525 | Msa0047280:intron | 40.0% |
| ! | TTTTGTGGCAGCTAAATCCA+AGG | + | chr1_1:80062521-80062540 | Msa0047280:intron | 40.0% |
| TTTGTGGCAGCTAAATCCAA+GGG | + | chr1_1:80062522-80062541 | Msa0047280:intron | 40.0% | |
| TCTCGCAACAGTATAAGAGA+CGG | + | chr1_1:80062801-80062820 | Msa0047280:intron | 40.0% | |
| !! | CTCAAGCTTGTTGCATATGT+TGG | + | chr1_1:80062852-80062871 | Msa0047280:CDS | 40.0% |
| GGCTTGCAAGTCCATTATAA+TGG | - | chr1_1:80063206-80063225 | None:intergenic | 40.0% | |
| ! | GAATTCCATTGTACGCCTTT+TGG | + | chr1_1:80063280-80063299 | Msa0047280:intron | 40.0% |
| ! | TTTTTGTCGACATACCTGCT+TGG | + | chr1_1:80063547-80063566 | Msa0047280:CDS | 40.0% |
| TTTGCGGAATTGTCTGATGA+AGG | + | chr1_1:80063585-80063604 | Msa0047280:CDS | 40.0% | |
| ATCACATCTGCAGATTTGTG+TGG | - | chr1_1:80063613-80063632 | None:intergenic | 40.0% | |
| ACAAATCTGCAGATGTGATG+AGG | + | chr1_1:80063614-80063633 | Msa0047280:CDS | 40.0% | |
| GTTCCTCCTTCAAGAATTCT+GGG | + | chr1_1:80064094-80064113 | Msa0047280:three_prime_UTR | 40.0% | |
| TTGTCTCCCAGAATTCTTGA+AGG | - | chr1_1:80064103-80064122 | None:intergenic | 40.0% | |
| ! | AATTCTGGGAGACAAAGAAG+AGG | + | chr1_1:80064108-80064127 | Msa0047280:three_prime_UTR | 40.0% |
| ! | AGAGGCATAAAGTTGCATGA+TGG | + | chr1_1:80064126-80064145 | Msa0047280:three_prime_UTR | 40.0% |
| TGTCTTTGTGGAAGTAGTCC+TGG | + | chr1_1:80061063-80061082 | Msa0047280:five_prime_UTR | 45.0% | |
| TCGTTGCAAACTTCAGTTGG+GGG | + | chr1_1:80061246-80061265 | Msa0047280:intron | 45.0% | |
| ! | TTTTGCTAGTGCAAAGCCAG+AGG | + | chr1_1:80061377-80061396 | Msa0047280:intron | 45.0% |
| ! | CAAGTCCTAGAAGCATGCAA+TGG | - | chr1_1:80061651-80061670 | None:intergenic | 45.0% |
| AGCTGTCAAAGCTACTGATG+AGG | + | chr1_1:80061866-80061885 | Msa0047280:CDS | 45.0% | |
| ! | AGAGTCCAAGAGGCATACAA+TGG | - | chr1_1:80062194-80062213 | None:intergenic | 45.0% |
| !!! | ACGGCTGGTTTCTTTTGATC+AGG | + | chr1_1:80062820-80062839 | Msa0047280:intron | 45.0% |
| !! | GCTGGTTTCTTTTGATCAGG+TGG | + | chr1_1:80062823-80062842 | Msa0047280:intron | 45.0% |
| ! | GGAATCCAAAAGGCGTACAA+TGG | - | chr1_1:80063288-80063307 | None:intergenic | 45.0% |
| ! | AGACAATTCCGCAAAGCGTT+TGG | - | chr1_1:80063580-80063599 | None:intergenic | 45.0% |
| GGTTCCTCCTTCAAGAATTC+TGG | + | chr1_1:80064093-80064112 | Msa0047280:three_prime_UTR | 45.0% | |
| TCTCCCAGAATTCTTGAAGG+AGG | - | chr1_1:80064100-80064119 | None:intergenic | 45.0% | |
| GCTTGCAAAATGTGATGGCA+AGG | + | chr1_1:80064360-80064379 | Msa0047280:three_prime_UTR | 45.0% | |
| CAAAATGTGATGGCAAGGCA+AGG | + | chr1_1:80064365-80064384 | Msa0047280:three_prime_UTR | 45.0% | |
| AGAAAGAGCCTTGGAGAGAA+AGG | + | chr1_1:80064461-80064480 | Msa0047280:three_prime_UTR | 45.0% | |
| !!! | TAAGATTTTTTTTTTTAAAA+GGG | - | chr1_1:80061278-80061297 | None:intergenic | 5.0% |
| !!! | ATAAGATTTTTTTTTTTAAA+AGG | - | chr1_1:80061279-80061298 | None:intergenic | 5.0% |
| !! | AATAATAACAATAATAATAT+AGG | + | chr1_1:80063348-80063367 | Msa0047280:intron | 5.0% |
| !! | TAATTATAAATATAATTGTT+AGG | + | chr1_1:80063980-80063999 | Msa0047280:three_prime_UTR | 5.0% |
| !! | AATTATAAATATAATTGTTA+GGG | + | chr1_1:80063981-80064000 | Msa0047280:three_prime_UTR | 5.0% |
| AAAGAGCTACCGTGTAGGTC+AGG | - | chr1_1:80060799-80060818 | None:intergenic | 50.0% | |
| TTTGTGGAAGTAGTCCTGGC+AGG | + | chr1_1:80061067-80061086 | Msa0047280:five_prime_UTR | 50.0% | |
| CGTTGCAAACTTCAGTTGGG+GGG | + | chr1_1:80061247-80061266 | Msa0047280:intron | 50.0% | |
| GCAACAGTATAAGAGACGGC+TGG | + | chr1_1:80062805-80062824 | Msa0047280:intron | 50.0% | |
| GCTGCTATCCAAACGCTTTG+CGG | + | chr1_1:80063569-80063588 | Msa0047280:CDS | 50.0% | |
| GCCTTCATACTGCTTTCTGC+TGG | + | chr1_1:80064067-80064086 | Msa0047280:three_prime_UTR | 50.0% | |
| GCCAGCAGAAAGCAGTATGA+AGG | - | chr1_1:80064071-80064090 | None:intergenic | 50.0% | |
| CGAAAGAGCCTTGGAGAGAA+AGG | + | chr1_1:80064418-80064437 | Msa0047280:three_prime_UTR | 50.0% | |
| AGAGCCTTGGAGAGAAAGGA+AGG | + | chr1_1:80064422-80064441 | Msa0047280:three_prime_UTR | 50.0% | |
| GAGCCTTGGAGAGAAAGGAA+GGG | + | chr1_1:80064423-80064442 | Msa0047280:three_prime_UTR | 50.0% | |
| AAGCCCTTCCTTTCTCTCCA+AGG | - | chr1_1:80064429-80064448 | None:intergenic | 50.0% | |
| TTGGAGAGAAAGGAAGGGCT+TGG | + | chr1_1:80064428-80064447 | Msa0047280:three_prime_UTR | 50.0% | |
| AGAATTTGCAGTGCAGCGCA+GGG | - | chr1_1:80064487-80064506 | None:intergenic | 50.0% | |
| ! | CAGGAGAGCACGTGTCTTTG+TGG | + | chr1_1:80061051-80061070 | Msa0047280:five_prime_UTR | 55.0% |
| TGGAAGTAGTCCTGGCAGGA+AGG | + | chr1_1:80061071-80061090 | Msa0047280:five_prime_UTR | 55.0% | |
| CGTTTGGATAGCAGCCAAGC+AGG | - | chr1_1:80063564-80063583 | None:intergenic | 55.0% | |
| CATACTGCTTTCTGCTGGCG+TGG | + | chr1_1:80064072-80064091 | Msa0047280:three_prime_UTR | 55.0% | |
| TGAGGGAAGCGAAAGAGCCT+TGG | + | chr1_1:80064409-80064428 | Msa0047280:three_prime_UTR | 55.0% | |
| GCGTGAGAGAGAAAGAGCCT+TGG | + | chr1_1:80064452-80064471 | Msa0047280:three_prime_UTR | 55.0% | |
| CAGAATTTGCAGTGCAGCGC+AGG | - | chr1_1:80064488-80064507 | None:intergenic | 55.0% | |
| GGCTACTCTTCCTTCCTGCC+AGG | - | chr1_1:80061084-80061103 | None:intergenic | 60.0% | |
| GCGCAGGGCCTTTCTCTCCA+AGG | - | chr1_1:80064472-80064491 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 80060785 | 80064519 | 80060785 | ID=Msa0047280;Name=Msa0047280 |
| chr1_1 | mRNA | 80060785 | 80064519 | 80060785 | ID=Msa0047280-mRNA-1;Parent=Msa0047280;Name=Msa0047280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=287|0.75|0.8|1|0|0|5|806|108 |
| chr1_1 | exon | 80060785 | 80060911 | 80060785 | ID=Msa0047280-mRNA-1:exon:27628;Parent=Msa0047280-mRNA-1 |
| chr1_1 | exon | 80061003 | 80061139 | 80061003 | ID=Msa0047280-mRNA-1:exon:27629;Parent=Msa0047280-mRNA-1 |
| chr1_1 | exon | 80061836 | 80061935 | 80061836 | ID=Msa0047280-mRNA-1:exon:27630;Parent=Msa0047280-mRNA-1 |
| chr1_1 | exon | 80062842 | 80062918 | 80062842 | ID=Msa0047280-mRNA-1:exon:27631;Parent=Msa0047280-mRNA-1 |
| chr1_1 | exon | 80063541 | 80064519 | 80063541 | ID=Msa0047280-mRNA-1:exon:27632;Parent=Msa0047280-mRNA-1 |
| chr1_1 | five_prime_UTR | 80060785 | 80060911 | 80060785 | ID=Msa0047280-mRNA-1:five_prime_utr;Parent=Msa0047280-mRNA-1 |
| chr1_1 | five_prime_UTR | 80061003 | 80061139 | 80061003 | ID=Msa0047280-mRNA-1:five_prime_utr;Parent=Msa0047280-mRNA-1 |
| chr1_1 | five_prime_UTR | 80061836 | 80061858 | 80061836 | ID=Msa0047280-mRNA-1:five_prime_utr;Parent=Msa0047280-mRNA-1 |
| chr1_1 | CDS | 80061859 | 80061935 | 80061859 | ID=Msa0047280-mRNA-1:cds;Parent=Msa0047280-mRNA-1 |
| chr1_1 | CDS | 80062842 | 80062918 | 80062842 | ID=Msa0047280-mRNA-1:cds;Parent=Msa0047280-mRNA-1 |
| chr1_1 | CDS | 80063541 | 80063713 | 80063541 | ID=Msa0047280-mRNA-1:cds;Parent=Msa0047280-mRNA-1 |
| chr1_1 | three_prime_UTR | 80063714 | 80064519 | 80063714 | ID=Msa0047280-mRNA-1:three_prime_utr;Parent=Msa0047280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
