AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454450 MtrunA17_Chr6g0461441 86.585 82 11 0 9 90 19 100 1.77e-48 149
Msa1454450 MtrunA17_Chr5g0448111 83.333 84 14 0 1 84 1 84 3.52e-48 147
Msa1454450 MtrunA17_Chr7g0253291 61.798 89 31 2 1 88 1 87 6.96e-35 114
Msa1454450 MtrunA17_Chr5g0448171 47.368 76 37 1 1 76 1 73 1.42e-20 77.8
Msa1454450 MtrunA17_Chr3g0107031 46.341 82 38 1 1 76 1 82 1.15e-19 75.9
Msa1454450 MtrunA17_Chr5g0432481 42.697 89 42 2 1 80 1 89 2.64e-19 75.1
Msa1454450 MtrunA17_Chr3g0078131 44.444 81 40 1 1 76 1 81 4.69e-19 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454450 AT5G18150.1 62.821 78 21 2 1 78 1 70 8.66e-31 103
Msa1454450 AT5G14602.1 57.143 84 32 2 1 84 1 80 4.96e-30 102
Msa1454450 AT5G58375.1 44.048 84 42 2 1 81 1 82 1.07e-16 68.6

Find 32 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTATTTGTGACTTTA+TGG 0.036151 tig0035192:-16998 Msa1454450:intergenic
AGATGATTCAAAATGGATTT+TGG 0.097169 tig0035192:+17874 Msa1454450:intron
AGAGAGAGATGTGTCCTTTA+AGG 0.173917 tig0035192:+17192 Msa1454450:exon
ATTGAAATCCTCTAAGAATT+AGG 0.190751 tig0035192:+17965 Msa1454450:CDS
ATTGAGTCCCTAATTCTTAG+AGG 0.300143 tig0035192:-17973 Msa1454450:intergenic
AACACCAAGATGAACCTTAA+AGG 0.300317 tig0035192:-17206 Msa1454450:intergenic
GGTGTTCTTCTCTGCGGTTC+TGG 0.325709 tig0035192:+17223 Msa1454450:CDS
CTGTCTCAATATGCAAATAA+TGG 0.348611 tig0035192:+16902 Msa1454450:five_prime_UTR
ATCTTCACCAAAGATTGATT+TGG 0.357200 tig0035192:+17274 Msa1454450:CDS
TTGAAATCCTCTAAGAATTA+GGG 0.358948 tig0035192:+17966 Msa1454450:CDS
TAAAATTTGTACAAGAATGT+TGG 0.359414 tig0035192:-17099 Msa1454450:intergenic
TCACAAGCCAAATCAATCTT+TGG 0.382003 tig0035192:-17281 Msa1454450:intergenic
AAAATAGTAATTTAGACATA+AGG 0.388030 tig0035192:-18097 Msa1454450:intergenic
TTCTGGCAGGTTACTTTGCA+TGG 0.389470 tig0035192:+17240 Msa1454450:CDS
AAAATTTGTACAAGAATGTT+GGG 0.392593 tig0035192:-17098 Msa1454450:intergenic
TGGCTAGTGGAAGGTATCTA+TGG 0.397595 tig0035192:+17910 Msa1454450:CDS
GTAATTTAGACATAAGGCTT+TGG 0.399452 tig0035192:-18091 Msa1454450:intergenic
GTGGGTTCAAGAATAATCTT+TGG 0.400788 tig0035192:+18019 Msa1454450:three_prime_UTR
TTCTTCTCTGCGGTTCTGGC+AGG 0.404540 tig0035192:+17227 Msa1454450:CDS
GTGTCATAAATCCTTGTTTG+TGG 0.445301 tig0035192:+18000 Msa1454450:three_prime_UTR
TTTGTACAAGAATGTTGGGT+TGG 0.456163 tig0035192:-17094 Msa1454450:intergenic
GTGTCCTTTAAGGTTCATCT+TGG 0.474313 tig0035192:+17202 Msa1454450:CDS
TGTCATAAATCCTTGTTTGT+GGG 0.513684 tig0035192:+18001 Msa1454450:three_prime_UTR
GGTATCTATGGAGAAATTTG+AGG 0.538445 tig0035192:+17922 Msa1454450:CDS
TTTGTTAGCATTGAATTGAG+AGG 0.552114 tig0035192:-18136 Msa1454450:intergenic
GGCTTGTGATGATTCAATTG+AGG 0.570775 tig0035192:+17295 Msa1454450:CDS
AGGTTACTTTGCATGGAGAA+CGG 0.580884 tig0035192:+17247 Msa1454450:CDS
GTATTCGTTGACATGGCTAG+TGG 0.585469 tig0035192:+17897 Msa1454450:CDS
TATTCTTGAACCCACAAACA+AGG 0.585639 tig0035192:-18011 Msa1454450:intergenic
TGCAAATAATGGCATGCAGT+TGG 0.587358 tig0035192:+16913 Msa1454450:five_prime_UTR
CATCTTGGTGTTCTTCTCTG+CGG 0.597461 tig0035192:+17217 Msa1454450:CDS
TCGTTGACATGGCTAGTGGA+AGG 0.632760 tig0035192:+17901 Msa1454450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTGATATTTT+TGG - tig0035192:17070-17089 Msa1454450:intergenic 10.0%
!!! ATTTTTTATATAATTGATCT+TGG + tig0035192:17385-17404 Msa1454450:intron 10.0%
!!! TTATTTTTAATTTTTGTGTT+TGG + tig0035192:17807-17826 Msa1454450:intron 10.0%
!!! TATTTTTTTTGAAAGAAATT+CGG + tig0035192:18166-18185 Msa1454450:three_prime_UTR 10.0%
!!! TTTTTTTTTGTTGATATTTT+TGG - tig0035192:17070-17089 Msa1454450:intergenic 10.0%
!!! ATTTTTTATATAATTGATCT+TGG + tig0035192:17385-17404 Msa1454450:intron 10.0%
!!! TTATTTTTAATTTTTGTGTT+TGG + tig0035192:17807-17826 Msa1454450:intron 10.0%
!!! TATTTTTTTTGAAAGAAATT+CGG + tig0035192:18166-18185 Msa1454450:three_prime_UTR 10.0%
!!! ACATAACTTTAAAAAGATAA+AGG - tig0035192:17413-17432 Msa1454450:intergenic 15.0%
!! AAAATTAAAATTCCAAGATT+TGG - tig0035192:17468-17487 Msa1454450:intergenic 15.0%
!! AATTAATAACTAATGTTGAT+TGG + tig0035192:17530-17549 Msa1454450:intron 15.0%
!!! ATTAATAACTAATGTTGATT+GGG + tig0035192:17531-17550 Msa1454450:intron 15.0%
!! AAAATAGTAATTTAGACATA+AGG - tig0035192:18100-18119 Msa1454450:intergenic 15.0%
!!! ACATAACTTTAAAAAGATAA+AGG - tig0035192:17413-17432 Msa1454450:intergenic 15.0%
!! AAAATTAAAATTCCAAGATT+TGG - tig0035192:17468-17487 Msa1454450:intergenic 15.0%
!! AATTAATAACTAATGTTGAT+TGG + tig0035192:17530-17549 Msa1454450:intron 15.0%
!!! ATTAATAACTAATGTTGATT+GGG + tig0035192:17531-17550 Msa1454450:intron 15.0%
!! AAAATAGTAATTTAGACATA+AGG - tig0035192:18100-18119 Msa1454450:intergenic 15.0%
!!! TTTTTGTTTACAATGTCAAA+AGG - tig0035192:16947-16966 Msa1454450:intergenic 20.0%
!!! TTGATATTTTTGGTTTTATG+AGG - tig0035192:17060-17079 Msa1454450:intergenic 20.0%
!! AAAATTTGTACAAGAATGTT+GGG - tig0035192:17101-17120 Msa1454450:intergenic 20.0%
!! TAAAATTTGTACAAGAATGT+TGG - tig0035192:17102-17121 Msa1454450:intergenic 20.0%
!!! TTGTACAAATTTTAATTCGT+GGG + tig0035192:17108-17127 Msa1454450:five_prime_UTR 20.0%
!!! AAAAATCACATTGTTGTTTA+AGG + tig0035192:17156-17175 Msa1454450:five_prime_UTR 20.0%
!!! TAGATGATGTTTTATTGTTA+AGG + tig0035192:17558-17577 Msa1454450:intron 20.0%
!!! ATGTTTTATTGTTAAGGTTT+GGG + tig0035192:17564-17583 Msa1454450:intron 20.0%
!!! TGTTTTGGTTTTTTAATCAT+GGG + tig0035192:17613-17632 Msa1454450:intron 20.0%
!!! ATGATATGCTAATTGATTTT+GGG + tig0035192:17656-17675 Msa1454450:intron 20.0%
!!! TTAAATCTTGGAATTTTCTT+TGG + tig0035192:17748-17767 Msa1454450:intron 20.0%
!!! TAAATCTTGGAATTTTCTTT+GGG + tig0035192:17749-17768 Msa1454450:intron 20.0%
!!! TTTTTGTTTACAATGTCAAA+AGG - tig0035192:16947-16966 Msa1454450:intergenic 20.0%
!!! TTGATATTTTTGGTTTTATG+AGG - tig0035192:17060-17079 Msa1454450:intergenic 20.0%
!! AAAATTTGTACAAGAATGTT+GGG - tig0035192:17101-17120 Msa1454450:intergenic 20.0%
!! TAAAATTTGTACAAGAATGT+TGG - tig0035192:17102-17121 Msa1454450:intergenic 20.0%
!!! TTGTACAAATTTTAATTCGT+GGG + tig0035192:17108-17127 Msa1454450:five_prime_UTR 20.0%
!!! AAAAATCACATTGTTGTTTA+AGG + tig0035192:17156-17175 Msa1454450:five_prime_UTR 20.0%
!!! TAGATGATGTTTTATTGTTA+AGG + tig0035192:17558-17577 Msa1454450:intron 20.0%
!!! ATGTTTTATTGTTAAGGTTT+GGG + tig0035192:17564-17583 Msa1454450:intron 20.0%
!!! TGTTTTGGTTTTTTAATCAT+GGG + tig0035192:17613-17632 Msa1454450:intron 20.0%
!!! ATGATATGCTAATTGATTTT+GGG + tig0035192:17656-17675 Msa1454450:intron 20.0%
!!! TTAAATCTTGGAATTTTCTT+TGG + tig0035192:17748-17767 Msa1454450:intron 20.0%
!!! TAAATCTTGGAATTTTCTTT+GGG + tig0035192:17749-17768 Msa1454450:intron 20.0%
! AACAACTATTTGTGACTTTA+TGG - tig0035192:17001-17020 Msa1454450:intergenic 25.0%
!!! CTTGTACAAATTTTAATTCG+TGG + tig0035192:17107-17126 Msa1454450:five_prime_UTR 25.0%
!! CAACAATGTGATTTTTATGA+AGG - tig0035192:17152-17171 Msa1454450:intergenic 25.0%
! AGAAAAATCATCTTTCAAGA+AGG + tig0035192:17319-17338 Msa1454450:CDS 25.0%
!!! GGAAGATTTTGATTTCAAAA+AGG + tig0035192:17340-17359 Msa1454450:CDS 25.0%
!!! GATGTTTTATTGTTAAGGTT+TGG + tig0035192:17563-17582 Msa1454450:intron 25.0%
!!! GTGTTTTGGTTTTTTAATCA+TGG + tig0035192:17612-17631 Msa1454450:intron 25.0%
! TTAATCATGGGAATAATGAT+TGG + tig0035192:17625-17644 Msa1454450:intron 25.0%
!!! GATGATATGCTAATTGATTT+TGG + tig0035192:17655-17674 Msa1454450:intron 25.0%
! ATTCACCAAAATATGTTGAT+TGG + tig0035192:17703-17722 Msa1454450:intron 25.0%
!! TTCACCAAAATATGTTGATT+GGG + tig0035192:17704-17723 Msa1454450:intron 25.0%
!! TAAACCCAATCAACATATTT+TGG - tig0035192:17711-17730 Msa1454450:intergenic 25.0%
!! AACTCATCAAAATGTTGATT+GGG + tig0035192:17846-17865 Msa1454450:intron 25.0%
!!! AGATGATTCAAAATGGATTT+TGG + tig0035192:17874-17893 Msa1454450:intron 25.0%
!!! GATGATTCAAAATGGATTTT+GGG + tig0035192:17875-17894 Msa1454450:intron 25.0%
!! ATTGAAATCCTCTAAGAATT+AGG + tig0035192:17965-17984 Msa1454450:CDS 25.0%
!! TTGAAATCCTCTAAGAATTA+GGG + tig0035192:17966-17985 Msa1454450:CDS 25.0%
! AACAACTATTTGTGACTTTA+TGG - tig0035192:17001-17020 Msa1454450:intergenic 25.0%
!!! CTTGTACAAATTTTAATTCG+TGG + tig0035192:17107-17126 Msa1454450:five_prime_UTR 25.0%
!! CAACAATGTGATTTTTATGA+AGG - tig0035192:17152-17171 Msa1454450:intergenic 25.0%
! AGAAAAATCATCTTTCAAGA+AGG + tig0035192:17319-17338 Msa1454450:CDS 25.0%
!!! GGAAGATTTTGATTTCAAAA+AGG + tig0035192:17340-17359 Msa1454450:CDS 25.0%
!!! GATGTTTTATTGTTAAGGTT+TGG + tig0035192:17563-17582 Msa1454450:intron 25.0%
!!! GTGTTTTGGTTTTTTAATCA+TGG + tig0035192:17612-17631 Msa1454450:intron 25.0%
! TTAATCATGGGAATAATGAT+TGG + tig0035192:17625-17644 Msa1454450:intron 25.0%
!!! GATGATATGCTAATTGATTT+TGG + tig0035192:17655-17674 Msa1454450:intron 25.0%
! ATTCACCAAAATATGTTGAT+TGG + tig0035192:17703-17722 Msa1454450:intron 25.0%
!! TTCACCAAAATATGTTGATT+GGG + tig0035192:17704-17723 Msa1454450:intron 25.0%
!! TAAACCCAATCAACATATTT+TGG - tig0035192:17711-17730 Msa1454450:intergenic 25.0%
!! AACTCATCAAAATGTTGATT+GGG + tig0035192:17846-17865 Msa1454450:intron 25.0%
!!! AGATGATTCAAAATGGATTT+TGG + tig0035192:17874-17893 Msa1454450:intron 25.0%
!!! GATGATTCAAAATGGATTTT+GGG + tig0035192:17875-17894 Msa1454450:intron 25.0%
!! ATTGAAATCCTCTAAGAATT+AGG + tig0035192:17965-17984 Msa1454450:CDS 25.0%
!! TTGAAATCCTCTAAGAATTA+GGG + tig0035192:17966-17985 Msa1454450:CDS 25.0%
CTGTCTCAATATGCAAATAA+TGG + tig0035192:16902-16921 Msa1454450:five_prime_UTR 30.0%
!!! ATTTTTGGTTTTATGAGGAG+AGG - tig0035192:17055-17074 Msa1454450:intergenic 30.0%
ATCTTCACCAAAGATTGATT+TGG + tig0035192:17274-17293 Msa1454450:CDS 30.0%
! CTTTGTGTTTGATTGTGTTT+TGG + tig0035192:17598-17617 Msa1454450:intron 30.0%
! GAGGTTTTCATGTTAAATCT+TGG + tig0035192:17736-17755 Msa1454450:intron 30.0%
GAACTCATCAAAATGTTGAT+TGG + tig0035192:17845-17864 Msa1454450:intron 30.0%
! GGTTTTCAGATGATTCAAAA+TGG + tig0035192:17867-17886 Msa1454450:intron 30.0%
! TGTCATAAATCCTTGTTTGT+GGG + tig0035192:18001-18020 Msa1454450:three_prime_UTR 30.0%
GTAATTTAGACATAAGGCTT+TGG - tig0035192:18094-18113 Msa1454450:intergenic 30.0%
! TTTGTTAGCATTGAATTGAG+AGG - tig0035192:18139-18158 Msa1454450:intergenic 30.0%
CTGTCTCAATATGCAAATAA+TGG + tig0035192:16902-16921 Msa1454450:five_prime_UTR 30.0%
!!! ATTTTTGGTTTTATGAGGAG+AGG - tig0035192:17055-17074 Msa1454450:intergenic 30.0%
ATCTTCACCAAAGATTGATT+TGG + tig0035192:17274-17293 Msa1454450:CDS 30.0%
! CTTTGTGTTTGATTGTGTTT+TGG + tig0035192:17598-17617 Msa1454450:intron 30.0%
! GAGGTTTTCATGTTAAATCT+TGG + tig0035192:17736-17755 Msa1454450:intron 30.0%
GAACTCATCAAAATGTTGAT+TGG + tig0035192:17845-17864 Msa1454450:intron 30.0%
! GGTTTTCAGATGATTCAAAA+TGG + tig0035192:17867-17886 Msa1454450:intron 30.0%
! TGTCATAAATCCTTGTTTGT+GGG + tig0035192:18001-18020 Msa1454450:three_prime_UTR 30.0%
GTAATTTAGACATAAGGCTT+TGG - tig0035192:18094-18113 Msa1454450:intergenic 30.0%
! TTTGTTAGCATTGAATTGAG+AGG - tig0035192:18139-18158 Msa1454450:intergenic 30.0%
TTTGTACAAGAATGTTGGGT+TGG - tig0035192:17097-17116 Msa1454450:intergenic 35.0%
AACACCAAGATGAACCTTAA+AGG - tig0035192:17209-17228 Msa1454450:intergenic 35.0%
TCACAAGCCAAATCAATCTT+TGG - tig0035192:17284-17303 Msa1454450:intergenic 35.0%
TAGTCTACGAATCCAAATCT+TGG + tig0035192:17453-17472 Msa1454450:intron 35.0%
GTTGATTGGGTTTATAGATG+AGG + tig0035192:17717-17736 Msa1454450:intron 35.0%
!! CTTGGAATTTTCTTTGGGTT+TGG + tig0035192:17754-17773 Msa1454450:intron 35.0%
!! ATTTTGGGTATTCGTTGACA+TGG + tig0035192:17890-17909 Msa1454450:CDS 35.0%
GGTATCTATGGAGAAATTTG+AGG + tig0035192:17922-17941 Msa1454450:CDS 35.0%
ATTGAGTCCCTAATTCTTAG+AGG - tig0035192:17976-17995 Msa1454450:intergenic 35.0%
! GTGTCATAAATCCTTGTTTG+TGG + tig0035192:18000-18019 Msa1454450:three_prime_UTR 35.0%
TATTCTTGAACCCACAAACA+AGG - tig0035192:18014-18033 Msa1454450:intergenic 35.0%
GTGGGTTCAAGAATAATCTT+TGG + tig0035192:18019-18038 Msa1454450:three_prime_UTR 35.0%
TTTGTACAAGAATGTTGGGT+TGG - tig0035192:17097-17116 Msa1454450:intergenic 35.0%
AACACCAAGATGAACCTTAA+AGG - tig0035192:17209-17228 Msa1454450:intergenic 35.0%
TCACAAGCCAAATCAATCTT+TGG - tig0035192:17284-17303 Msa1454450:intergenic 35.0%
TAGTCTACGAATCCAAATCT+TGG + tig0035192:17453-17472 Msa1454450:intron 35.0%
GTTGATTGGGTTTATAGATG+AGG + tig0035192:17717-17736 Msa1454450:intron 35.0%
!! CTTGGAATTTTCTTTGGGTT+TGG + tig0035192:17754-17773 Msa1454450:intron 35.0%
!! ATTTTGGGTATTCGTTGACA+TGG + tig0035192:17890-17909 Msa1454450:CDS 35.0%
GGTATCTATGGAGAAATTTG+AGG + tig0035192:17922-17941 Msa1454450:CDS 35.0%
ATTGAGTCCCTAATTCTTAG+AGG - tig0035192:17976-17995 Msa1454450:intergenic 35.0%
! GTGTCATAAATCCTTGTTTG+TGG + tig0035192:18000-18019 Msa1454450:three_prime_UTR 35.0%
TATTCTTGAACCCACAAACA+AGG - tig0035192:18014-18033 Msa1454450:intergenic 35.0%
GTGGGTTCAAGAATAATCTT+TGG + tig0035192:18019-18038 Msa1454450:three_prime_UTR 35.0%
TGCAAATAATGGCATGCAGT+TGG + tig0035192:16913-16932 Msa1454450:five_prime_UTR 40.0%
!!! TGGTTTTATGAGGAGAGGAA+AGG - tig0035192:17050-17069 Msa1454450:intergenic 40.0%
AGAGAGAGATGTGTCCTTTA+AGG + tig0035192:17192-17211 Msa1454450:exon 40.0%
!! GTGTCCTTTAAGGTTCATCT+TGG + tig0035192:17202-17221 Msa1454450:CDS 40.0%
! AGGTTACTTTGCATGGAGAA+CGG + tig0035192:17247-17266 Msa1454450:CDS 40.0%
GGCTTGTGATGATTCAATTG+AGG + tig0035192:17295-17314 Msa1454450:CDS 40.0%
TGCAAATAATGGCATGCAGT+TGG + tig0035192:16913-16932 Msa1454450:five_prime_UTR 40.0%
!!! TGGTTTTATGAGGAGAGGAA+AGG - tig0035192:17050-17069 Msa1454450:intergenic 40.0%
AGAGAGAGATGTGTCCTTTA+AGG + tig0035192:17192-17211 Msa1454450:exon 40.0%
!! GTGTCCTTTAAGGTTCATCT+TGG + tig0035192:17202-17221 Msa1454450:CDS 40.0%
! AGGTTACTTTGCATGGAGAA+CGG + tig0035192:17247-17266 Msa1454450:CDS 40.0%
GGCTTGTGATGATTCAATTG+AGG + tig0035192:17295-17314 Msa1454450:CDS 40.0%
!! CATCTTGGTGTTCTTCTCTG+CGG + tig0035192:17217-17236 Msa1454450:CDS 45.0%
! TTCTGGCAGGTTACTTTGCA+TGG + tig0035192:17240-17259 Msa1454450:CDS 45.0%
GTATTCGTTGACATGGCTAG+TGG + tig0035192:17897-17916 Msa1454450:CDS 45.0%
!! TGGCTAGTGGAAGGTATCTA+TGG + tig0035192:17910-17929 Msa1454450:CDS 45.0%
!! CATCTTGGTGTTCTTCTCTG+CGG + tig0035192:17217-17236 Msa1454450:CDS 45.0%
! TTCTGGCAGGTTACTTTGCA+TGG + tig0035192:17240-17259 Msa1454450:CDS 45.0%
GTATTCGTTGACATGGCTAG+TGG + tig0035192:17897-17916 Msa1454450:CDS 45.0%
!! TGGCTAGTGGAAGGTATCTA+TGG + tig0035192:17910-17929 Msa1454450:CDS 45.0%
!!! AAAATAATAATTTTTTTGAA+GGG - tig0035192:17370-17389 Msa1454450:intergenic 5.0%
!!! AAAAATAATAATTTTTTTGA+AGG - tig0035192:17371-17390 Msa1454450:intergenic 5.0%
!!! AAAATAATAATTTTTTTGAA+GGG - tig0035192:17370-17389 Msa1454450:intergenic 5.0%
!!! AAAAATAATAATTTTTTTGA+AGG - tig0035192:17371-17390 Msa1454450:intergenic 5.0%
TCGTTGACATGGCTAGTGGA+AGG + tig0035192:17901-17920 Msa1454450:CDS 50.0%
TCGTTGACATGGCTAGTGGA+AGG + tig0035192:17901-17920 Msa1454450:CDS 50.0%
GGTGTTCTTCTCTGCGGTTC+TGG + tig0035192:17223-17242 Msa1454450:CDS 55.0%
! TTCTTCTCTGCGGTTCTGGC+AGG + tig0035192:17227-17246 Msa1454450:CDS 55.0%
GGTGTTCTTCTCTGCGGTTC+TGG + tig0035192:17223-17242 Msa1454450:CDS 55.0%
! TTCTTCTCTGCGGTTCTGGC+AGG + tig0035192:17227-17246 Msa1454450:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0035192 gene 16895 18197 16895 ID=Msa1454450;Name=Msa1454450
tig0035192 mRNA 16895 18197 16895 ID=Msa1454450-mRNA-1;Parent=Msa1454450;Name=Msa1454450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=305|1|1|1|1|1|2|211|90
tig0035192 exon 16895 17361 16895 ID=Msa1454450-mRNA-1:exon:19741;Parent=Msa1454450-mRNA-1
tig0035192 exon 17876 18197 17876 ID=Msa1454450-mRNA-1:exon:19742;Parent=Msa1454450-mRNA-1
tig0035192 five_prime_UTR 16895 17199 16895 ID=Msa1454450-mRNA-1:five_prime_utr;Parent=Msa1454450-mRNA-1
tig0035192 CDS 17200 17361 17200 ID=Msa1454450-mRNA-1:cds;Parent=Msa1454450-mRNA-1
tig0035192 CDS 17876 17986 17876 ID=Msa1454450-mRNA-1:cds;Parent=Msa1454450-mRNA-1
tig0035192 three_prime_UTR 17987 18197 17987 ID=Msa1454450-mRNA-1:three_prime_utr;Parent=Msa1454450-mRNA-1
Gene Sequence

>Msa1454450

ATGTGTCCTTTAAGGTTCATCTTGGTGTTCTTCTCTGCGGTTCTGGCAGGTTACTTTGCATGGAGAACGGTTAGATCTTCACCAAAGATTGATTTGGCTTGTGATGATTCAATTGAGGAAGAAAAATCATCTTTCAAGAAGGAAGATTTTGATTTCAAAAAGATGATTCAAAATGGATTTTGGGTATTCGTTGACATGGCTAGTGGAAGGTATCTATGGAGAAATTTGAGGCAAACAAACAAAGATGAAGAATTGAAATCCTCTAAGAATTAG

Protein sequence

>Msa1454450

MCPLRFILVFFSAVLAGYFAWRTVRSSPKIDLACDDSIEEEKSSFKKEDFDFKKMIQNGFWVFVDMASGRYLWRNLRQTNKDEELKSSKN*