Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549900 | XP_013456380.2 | 92.641 | 462 | 9 | 1 | 1 | 462 | 1 | 437 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549900 | sp|Q9LN62|RRA3_ARATH | 69.264 | 462 | 107 | 4 | 1 | 461 | 1 | 428 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549900 | A0A396IC16 | 92.641 | 462 | 9 | 1 | 1 | 462 | 1 | 437 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0549900 | 0.801418 | 9.090821e-49 | -8.615850e-47 |
| Msa0011010 | Msa0549900 | 0.801675 | 8.050344e-49 | -8.615850e-47 |
| Msa0011040 | Msa0549900 | 0.808291 | 3.329441e-50 | -8.615850e-47 |
| Msa0013270 | Msa0549900 | 0.866237 | 3.302628e-65 | -8.615850e-47 |
| Msa0017710 | Msa0549900 | 0.844447 | 7.518270e-59 | -8.615850e-47 |
| Msa0024650 | Msa0549900 | 0.815850 | 7.484487e-52 | -8.615850e-47 |
| Msa0025570 | Msa0549900 | 0.857929 | 1.167164e-62 | -8.615850e-47 |
| Msa0027030 | Msa0549900 | -0.800149 | 1.650097e-48 | -8.615850e-47 |
| Msa0034330 | Msa0549900 | -0.807141 | 5.842147e-50 | -8.615850e-47 |
| Msa0036810 | Msa0549900 | 0.809438 | 1.892172e-50 | -8.615850e-47 |
| Msa0038750 | Msa0549900 | -0.803843 | 2.872237e-49 | -8.615850e-47 |
| Msa0039750 | Msa0549900 | 0.852082 | 5.829665e-61 | -8.615850e-47 |
| Msa0040930 | Msa0549900 | 0.812365 | 4.398639e-51 | -8.615850e-47 |
| Msa0042240 | Msa0549900 | -0.800314 | 1.527229e-48 | -8.615850e-47 |
| Msa0044530 | Msa0549900 | -0.822189 | 2.706579e-53 | -8.615850e-47 |
| Msa0047560 | Msa0549900 | -0.820224 | 7.679993e-53 | -8.615850e-47 |
| Msa0047660 | Msa0549900 | -0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0048380 | Msa0549900 | 0.803276 | 3.766725e-49 | -8.615850e-47 |
| Msa0051910 | Msa0549900 | 0.802237 | 6.172545e-49 | -8.615850e-47 |
| Msa0060410 | Msa0549900 | 0.830413 | 2.977740e-55 | -8.615850e-47 |
| Msa0062190 | Msa0549900 | 0.828011 | 1.139406e-54 | -8.615850e-47 |
| Msa0065520 | Msa0549900 | -0.811537 | 6.661377e-51 | -8.615850e-47 |
| Msa0073110 | Msa0549900 | 0.854912 | 8.971600e-62 | -8.615850e-47 |
| Msa0078160 | Msa0549900 | -0.813603 | 2.354442e-51 | -8.615850e-47 |
| Msa0081120 | Msa0549900 | -0.809724 | 1.642766e-50 | -8.615850e-47 |
| Msa0081790 | Msa0549900 | -0.801770 | 7.696433e-49 | -8.615850e-47 |
| Msa0084190 | Msa0549900 | 0.804086 | 2.557007e-49 | -8.615850e-47 |
| Msa0085690 | Msa0549900 | -0.821167 | 4.662137e-53 | -8.615850e-47 |
| Msa0086620 | Msa0549900 | -0.817257 | 3.622706e-52 | -8.615850e-47 |
| Msa0091220 | Msa0549900 | -0.815354 | 9.653231e-52 | -8.615850e-47 |
| Msa0091240 | Msa0549900 | -0.820980 | 5.150036e-53 | -8.615850e-47 |
| Msa0095890 | Msa0549900 | -0.824636 | 7.251149e-54 | -8.615850e-47 |
| Msa0105590 | Msa0549900 | -0.808998 | 2.350949e-50 | -8.615850e-47 |
| Msa0106540 | Msa0549900 | 0.838724 | 2.425990e-57 | -8.615850e-47 |
| Msa0111780 | Msa0549900 | 0.804301 | 2.306510e-49 | -8.615850e-47 |
| Msa0115700 | Msa0549900 | 0.800156 | 1.645108e-48 | -8.615850e-47 |
| Msa0120450 | Msa0549900 | 0.800140 | 1.656898e-48 | -8.615850e-47 |
| Msa0121320 | Msa0549900 | 0.851600 | 7.986041e-61 | -8.615850e-47 |
| Msa0122170 | Msa0549900 | -0.818825 | 1.601683e-52 | -8.615850e-47 |
| Msa0127350 | Msa0549900 | -0.816507 | 5.336191e-52 | -8.615850e-47 |
| Msa0132080 | Msa0549900 | -0.828577 | 8.323368e-55 | -8.615850e-47 |
| Msa0132250 | Msa0549900 | 0.813036 | 3.135855e-51 | -8.615850e-47 |
| Msa0136090 | Msa0549900 | 0.811516 | 6.733801e-51 | -8.615850e-47 |
| Msa0136180 | Msa0549900 | -0.818711 | 1.699476e-52 | -8.615850e-47 |
| Msa0137010 | Msa0549900 | -0.816918 | 4.316892e-52 | -8.615850e-47 |
| Msa0145050 | Msa0549900 | 0.808249 | 3.399037e-50 | -8.615850e-47 |
| Msa0163690 | Msa0549900 | 0.819959 | 8.829349e-53 | -8.615850e-47 |
| Msa0166180 | Msa0549900 | 0.858416 | 8.361851e-63 | -8.615850e-47 |
| Msa0169970 | Msa0549900 | 0.815615 | 8.442529e-52 | -8.615850e-47 |
| Msa0173600 | Msa0549900 | -0.834694 | 2.584920e-56 | -8.615850e-47 |
| Msa0186510 | Msa0549900 | -0.801639 | 8.187774e-49 | -8.615850e-47 |
| Msa0193680 | Msa0549900 | 0.832736 | 7.972088e-56 | -8.615850e-47 |
| Msa0196260 | Msa0549900 | 0.801717 | 7.893590e-49 | -8.615850e-47 |
| Msa0206370 | Msa0549900 | 0.817077 | 3.975613e-52 | -8.615850e-47 |
| Msa0207250 | Msa0549900 | -0.814867 | 1.237708e-51 | -8.615850e-47 |
| Msa0211460 | Msa0549900 | 0.809925 | 1.486712e-50 | -8.615850e-47 |
| Msa0212950 | Msa0549900 | -0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0213590 | Msa0549900 | -0.813162 | 2.942837e-51 | -8.615850e-47 |
| Msa0221460 | Msa0549900 | -0.808743 | 2.666201e-50 | -8.615850e-47 |
| Msa0224870 | Msa0549900 | 0.811875 | 5.624903e-51 | -8.615850e-47 |
| Msa0225070 | Msa0549900 | -0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0229350 | Msa0549900 | -0.810183 | 1.308164e-50 | -8.615850e-47 |
| Msa0234150 | Msa0549900 | 0.812717 | 3.682968e-51 | -8.615850e-47 |
| Msa0238110 | Msa0549900 | 0.803549 | 3.305785e-49 | -8.615850e-47 |
| Msa0364910 | Msa0549900 | -0.813826 | 2.103241e-51 | -8.615850e-47 |
| Msa0370620 | Msa0549900 | 0.820040 | 8.460764e-53 | -8.615850e-47 |
| Msa0379480 | Msa0549900 | 0.830894 | 2.270380e-55 | -8.615850e-47 |
| Msa0382020 | Msa0549900 | -0.817800 | 2.733091e-52 | -8.615850e-47 |
| Msa0382050 | Msa0549900 | -0.807755 | 4.328481e-50 | -8.615850e-47 |
| Msa0386880 | Msa0549900 | 0.808330 | 3.266510e-50 | -8.615850e-47 |
| Msa0388210 | Msa0549900 | 0.811398 | 7.143850e-51 | -8.615850e-47 |
| Msa0403740 | Msa0549900 | -0.822321 | 2.522318e-53 | -8.615850e-47 |
| Msa0409500 | Msa0549900 | 0.810282 | 1.245806e-50 | -8.615850e-47 |
| Msa0412580 | Msa0549900 | -0.830196 | 3.365221e-55 | -8.615850e-47 |
| Msa0424220 | Msa0549900 | -0.802212 | 6.243321e-49 | -8.615850e-47 |
| Msa0428300 | Msa0549900 | -0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa0428720 | Msa0549900 | -0.804718 | 1.888228e-49 | -8.615850e-47 |
| Msa0430040 | Msa0549900 | -0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0431270 | Msa0549900 | -0.821073 | 4.901726e-53 | -8.615850e-47 |
| Msa0436810 | Msa0549900 | 0.800501 | 1.399063e-48 | -8.615850e-47 |
| Msa0444770 | Msa0549900 | -0.809972 | 1.452764e-50 | -8.615850e-47 |
| Msa0454160 | Msa0549900 | 0.809283 | 2.043113e-50 | -8.615850e-47 |
| Msa0456450 | Msa0549900 | -0.824812 | 6.588048e-54 | -8.615850e-47 |
| Msa0457070 | Msa0549900 | -0.833831 | 4.254665e-56 | -8.615850e-47 |
| Msa0467170 | Msa0549900 | 0.818542 | 1.856163e-52 | -8.615850e-47 |
| Msa0467330 | Msa0549900 | 0.818362 | 2.039073e-52 | -8.615850e-47 |
| Msa0471130 | Msa0549900 | -0.817098 | 3.932520e-52 | -8.615850e-47 |
| Msa0471390 | Msa0549900 | 0.800275 | 1.555340e-48 | -8.615850e-47 |
| Msa0241750 | Msa0549900 | 0.809458 | 1.873908e-50 | -8.615850e-47 |
| Msa0244820 | Msa0549900 | -0.808436 | 3.100734e-50 | -8.615850e-47 |
| Msa0253230 | Msa0549900 | -0.812629 | 3.850240e-51 | -8.615850e-47 |
| Msa0258910 | Msa0549900 | 0.807265 | 5.499852e-50 | -8.615850e-47 |
| Msa0264710 | Msa0549900 | 0.803494 | 3.393350e-49 | -8.615850e-47 |
| Msa0266140 | Msa0549900 | -0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa0267450 | Msa0549900 | -0.815347 | 9.684406e-52 | -8.615850e-47 |
| Msa0267510 | Msa0549900 | -0.817908 | 2.583783e-52 | -8.615850e-47 |
| Msa0274570 | Msa0549900 | 0.821344 | 4.243942e-53 | -8.615850e-47 |
| Msa0276800 | Msa0549900 | -0.807979 | 3.878498e-50 | -8.615850e-47 |
| Msa0279000 | Msa0549900 | 0.800600 | 1.335521e-48 | -8.615850e-47 |
| Msa0279810 | Msa0549900 | 0.849652 | 2.819057e-60 | -8.615850e-47 |
| Msa0287480 | Msa0549900 | 0.817095 | 3.939232e-52 | -8.615850e-47 |
| Msa0299130 | Msa0549900 | -0.803920 | 2.768585e-49 | -8.615850e-47 |
| Msa0300670 | Msa0549900 | -0.812753 | 3.618088e-51 | -8.615850e-47 |
| Msa0304060 | Msa0549900 | -0.814969 | 1.174878e-51 | -8.615850e-47 |
| Msa0307630 | Msa0549900 | 0.839289 | 1.731757e-57 | -8.615850e-47 |
| Msa0314020 | Msa0549900 | 0.810098 | 1.364410e-50 | -8.615850e-47 |
| Msa0316000 | Msa0549900 | 0.805612 | 1.227406e-49 | -8.615850e-47 |
| Msa0316720 | Msa0549900 | -0.804385 | 2.215887e-49 | -8.615850e-47 |
| Msa0319220 | Msa0549900 | 0.841003 | 6.181916e-58 | -8.615850e-47 |
| Msa0331070 | Msa0549900 | -0.814535 | 1.466436e-51 | -8.615850e-47 |
| Msa0333770 | Msa0549900 | 0.800741 | 1.250315e-48 | -8.615850e-47 |
| Msa0336520 | Msa0549900 | 0.804251 | 2.363071e-49 | -8.615850e-47 |
| Msa0337760 | Msa0549900 | -0.802940 | 4.418906e-49 | -8.615850e-47 |
| Msa0339530 | Msa0549900 | 0.803845 | 2.870026e-49 | -8.615850e-47 |
| Msa0364030 | Msa0549900 | -0.822581 | 2.194398e-53 | -8.615850e-47 |
| Msa0484210 | Msa0549900 | -0.800312 | 1.529034e-48 | -8.615850e-47 |
| Msa0484590 | Msa0549900 | -0.817588 | 3.050987e-52 | -8.615850e-47 |
| Msa0491780 | Msa0549900 | 0.812774 | 3.579187e-51 | -8.615850e-47 |
| Msa0492330 | Msa0549900 | -0.820145 | 8.008226e-53 | -8.615850e-47 |
| Msa0506750 | Msa0549900 | 0.835970 | 1.230779e-56 | -8.615850e-47 |
| Msa0519070 | Msa0549900 | -0.805832 | 1.103408e-49 | -8.615850e-47 |
| Msa0525180 | Msa0549900 | -0.820530 | 6.534568e-53 | -8.615850e-47 |
| Msa0548260 | Msa0549900 | -0.803701 | 3.074477e-49 | -8.615850e-47 |
| Msa0548420 | Msa0549900 | 0.803288 | 3.745084e-49 | -8.615850e-47 |
| Msa0549900 | Msa0565700 | 0.811758 | 5.965262e-51 | -8.615850e-47 |
| Msa0549900 | Msa0567330 | 0.832191 | 1.088082e-55 | -8.615850e-47 |
| Msa0549900 | Msa0567570 | 0.841667 | 4.134317e-58 | -8.615850e-47 |
| Msa0549900 | Msa0575380 | 0.821137 | 4.737518e-53 | -8.615850e-47 |
| Msa0549900 | Msa0576180 | 0.819633 | 1.048079e-52 | -8.615850e-47 |
| Msa0549900 | Msa0576320 | 0.829810 | 4.180405e-55 | -8.615850e-47 |
| Msa0549900 | Msa0576500 | -0.836395 | 9.598003e-57 | -8.615850e-47 |
| Msa0549900 | Msa0580410 | -0.809017 | 2.328879e-50 | -8.615850e-47 |
| Msa0549900 | Msa0580890 | -0.809222 | 2.105206e-50 | -8.615850e-47 |
| Msa0549900 | Msa0582270 | -0.815580 | 8.596258e-52 | -8.615850e-47 |
| Msa0549900 | Msa0587730 | 0.814923 | 1.202778e-51 | -8.615850e-47 |
| Msa0549900 | Msa0603180 | -0.813913 | 2.012201e-51 | -8.615850e-47 |
| Msa0549900 | Msa0605380 | 0.843177 | 1.644400e-58 | -8.615850e-47 |
| Msa0549900 | Msa0606600 | 0.800339 | 1.510019e-48 | -8.615850e-47 |
| Msa0549900 | Msa0606820 | 0.817364 | 3.427314e-52 | -8.615850e-47 |
| Msa0549900 | Msa0610190 | 0.832273 | 1.038647e-55 | -8.615850e-47 |
| Msa0549900 | Msa0614960 | 0.831895 | 1.287524e-55 | -8.615850e-47 |
| Msa0549900 | Msa0616890 | -0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa0549900 | Msa0629160 | 0.807300 | 5.406750e-50 | -8.615850e-47 |
| Msa0549900 | Msa0638300 | -0.800421 | 1.452597e-48 | -8.615850e-47 |
| Msa0549900 | Msa0644220 | -0.817327 | 3.492713e-52 | -8.615850e-47 |
| Msa0549900 | Msa0647300 | 0.832450 | 9.388370e-56 | -8.615850e-47 |
| Msa0549900 | Msa0655370 | 0.801366 | 9.315327e-49 | -8.615850e-47 |
| Msa0549900 | Msa0659020 | -0.803759 | 2.990505e-49 | -8.615850e-47 |
| Msa0549900 | Msa0661480 | 0.842156 | 3.071109e-58 | -8.615850e-47 |
| Msa0549900 | Msa0676570 | -0.808238 | 3.417297e-50 | -8.615850e-47 |
| Msa0549900 | Msa0677130 | 0.801219 | 9.983297e-49 | -8.615850e-47 |
| Msa0549900 | Msa0680460 | 0.800720 | 1.262708e-48 | -8.615850e-47 |
| Msa0549900 | Msa0684030 | -0.835908 | 1.275945e-56 | -8.615850e-47 |
| Msa0549900 | Msa0686830 | 0.832360 | 9.882845e-56 | -8.615850e-47 |
| Msa0549900 | Msa0687220 | 0.811235 | 7.748976e-51 | -8.615850e-47 |
| Msa0549900 | Msa0689840 | 0.817248 | 3.639044e-52 | -8.615850e-47 |
| Msa0549900 | Msa0698110 | 0.804753 | 1.856917e-49 | -8.615850e-47 |
| Msa0549900 | Msa0699170 | 0.832390 | 9.713007e-56 | -8.615850e-47 |
| Msa0549900 | Msa0701800 | -0.802219 | 6.224967e-49 | -8.615850e-47 |
| Msa0549900 | Msa0705210 | 0.816015 | 6.875507e-52 | -8.615850e-47 |
| Msa0549900 | Msa0707330 | 0.823912 | 1.072519e-53 | -8.615850e-47 |
| Msa0549900 | Msa0707880 | -0.817741 | 2.818017e-52 | -8.615850e-47 |
| Msa0549900 | Msa0732970 | 0.819389 | 1.191760e-52 | -8.615850e-47 |
| Msa0549900 | Msa0738460 | -0.818612 | 1.789505e-52 | -8.615850e-47 |
| Msa0549900 | Msa0738680 | 0.828951 | 6.756600e-55 | -8.615850e-47 |
| Msa0549900 | Msa0741040 | 0.820009 | 8.602297e-53 | -8.615850e-47 |
| Msa0549900 | Msa0742090 | -0.803196 | 3.913000e-49 | -8.615850e-47 |
| Msa0549900 | Msa0750200 | -0.811930 | 5.471024e-51 | -8.615850e-47 |
| Msa0549900 | Msa0753590 | -0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0549900 | Msa0758780 | -0.814537 | 1.464555e-51 | -8.615850e-47 |
| Msa0549900 | Msa0758810 | -0.813971 | 1.953881e-51 | -8.615850e-47 |
| Msa0549900 | Msa0758880 | -0.800491 | 1.406022e-48 | -8.615850e-47 |
| Msa0549900 | Msa0761830 | 0.821047 | 4.969940e-53 | -8.615850e-47 |
| Msa0549900 | Msa0773960 | 0.817002 | 4.132589e-52 | -8.615850e-47 |
| Msa0549900 | Msa0774660 | 0.803051 | 4.191411e-49 | -8.615850e-47 |
| Msa0549900 | Msa0790650 | -0.813784 | 2.147726e-51 | -8.615850e-47 |
| Msa0549900 | Msa0792410 | 0.842526 | 2.449790e-58 | -8.615850e-47 |
| Msa0549900 | Msa0794900 | -0.810484 | 1.126323e-50 | -8.615850e-47 |
| Msa0549900 | Msa0795910 | -0.810236 | 1.274258e-50 | -8.615850e-47 |
| Msa0549900 | Msa0800120 | 0.803217 | 3.873265e-49 | -8.615850e-47 |
| Msa0549900 | Msa0801920 | -0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0549900 | Msa0804170 | 0.807248 | 5.546327e-50 | -8.615850e-47 |
| Msa0549900 | Msa0819150 | 0.830648 | 2.609193e-55 | -8.615850e-47 |
| Msa0549900 | Msa0821530 | 0.801808 | 7.560195e-49 | -8.615850e-47 |
| Msa0549900 | Msa0823310 | -0.809102 | 2.233921e-50 | -8.615850e-47 |
| Msa0549900 | Msa0823480 | -0.816967 | 4.208646e-52 | -8.615850e-47 |
| Msa0549900 | Msa0829250 | -0.814075 | 1.852846e-51 | -8.615850e-47 |
| Msa0549900 | Msa0831890 | 0.803218 | 3.872497e-49 | -8.615850e-47 |
| Msa0549900 | Msa0833200 | -0.827995 | 1.149767e-54 | -8.615850e-47 |
| Msa0549900 | Msa0833360 | -0.803770 | 2.974309e-49 | -8.615850e-47 |
| Msa0549900 | Msa0838120 | -0.804238 | 2.378154e-49 | -8.615850e-47 |
| Msa0549900 | Msa0838210 | 0.825326 | 4.982185e-54 | -8.615850e-47 |
| Msa0549900 | Msa0838620 | -0.816894 | 4.370620e-52 | -8.615850e-47 |
| Msa0549900 | Msa0842180 | 0.808031 | 3.781049e-50 | -8.615850e-47 |
| Msa0549900 | Msa0847140 | 0.811415 | 7.082421e-51 | -8.615850e-47 |
| Msa0549900 | Msa0851760 | 0.830923 | 2.233691e-55 | -8.615850e-47 |
| Msa0549900 | Msa0853200 | -0.827925 | 1.194754e-54 | -8.615850e-47 |
| Msa0549900 | Msa0853590 | 0.820248 | 7.584128e-53 | -8.615850e-47 |
| Msa0549900 | Msa0859270 | 0.823055 | 1.701780e-53 | -8.615850e-47 |
| Msa0549900 | Msa0871420 | 0.819017 | 1.448354e-52 | -8.615850e-47 |
| Msa0549900 | Msa0880850 | 0.822970 | 1.780965e-53 | -8.615850e-47 |
| Msa0549900 | Msa0880910 | 0.811750 | 5.989644e-51 | -8.615850e-47 |
| Msa0549900 | Msa0882780 | 0.805111 | 1.563196e-49 | -8.615850e-47 |
| Msa0549900 | Msa0892820 | -0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0549900 | Msa0898830 | -0.821284 | 4.381066e-53 | -8.615850e-47 |
| Msa0549900 | Msa0903590 | -0.804699 | 1.906051e-49 | -8.615850e-47 |
| Msa0549900 | Msa0928060 | -0.830069 | 3.613932e-55 | -8.615850e-47 |
| Msa0549900 | Msa0935840 | -0.808843 | 2.537174e-50 | -8.615850e-47 |
| Msa0549900 | Msa0938150 | -0.801060 | 1.076114e-48 | -8.615850e-47 |
| Msa0549900 | Msa0964400 | -0.823558 | 1.298675e-53 | -8.615850e-47 |
| Msa0549900 | Msa0967780 | 0.803044 | 4.205789e-49 | -8.615850e-47 |
| Msa0549900 | Msa0973010 | -0.817124 | 3.879460e-52 | -8.615850e-47 |
| Msa0549900 | Msa0973080 | -0.818607 | 1.794563e-52 | -8.615850e-47 |
| Msa0549900 | Msa0973770 | 0.812119 | 4.976786e-51 | -8.615850e-47 |
| Msa0549900 | Msa0998660 | -0.822697 | 2.061626e-53 | -8.615850e-47 |
| Msa0549900 | Msa1001930 | -0.800156 | 1.645108e-48 | -8.615850e-47 |
| Msa0549900 | Msa1002550 | -0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa0549900 | Msa1002820 | 0.826253 | 3.002115e-54 | -8.615850e-47 |
| Msa0549900 | Msa1002970 | -0.819108 | 1.380868e-52 | -8.615850e-47 |
| Msa0549900 | Msa1016580 | -0.810908 | 9.121418e-51 | -8.615850e-47 |
| Msa0549900 | Msa1029820 | 0.802684 | 4.992766e-49 | -8.615850e-47 |
| Msa0549900 | Msa1029860 | 0.836701 | 8.018797e-57 | -8.615850e-47 |
| Msa0549900 | Msa1036260 | -0.807919 | 3.994490e-50 | -8.615850e-47 |
| Msa0549900 | Msa1041060 | 0.829526 | 4.899988e-55 | -8.615850e-47 |
| Msa0549900 | Msa1056890 | 0.814138 | 1.794705e-51 | -8.615850e-47 |
| Msa0549900 | Msa1058550 | -0.800444 | 1.437023e-48 | -8.615850e-47 |
| Msa0549900 | Msa1068010 | -0.801827 | 7.492971e-49 | -8.615850e-47 |
| Msa0549900 | Msa1068730 | 0.804591 | 2.007555e-49 | -8.615850e-47 |
| Msa0549900 | Msa1068780 | 0.831364 | 1.741020e-55 | -8.615850e-47 |
| Msa0549900 | Msa1068950 | 0.834677 | 2.609775e-56 | -8.615850e-47 |
| Msa0549900 | Msa1075090 | 0.800221 | 1.595340e-48 | -8.615850e-47 |
| Msa0549900 | Msa1078120 | -0.808560 | 2.917132e-50 | -8.615850e-47 |
| Msa0549900 | Msa1078590 | -0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa0549900 | Msa1094810 | 0.815181 | 1.054688e-51 | -8.615850e-47 |
| Msa0549900 | Msa1103450 | 0.808425 | 3.116294e-50 | -8.615850e-47 |
| Msa0549900 | Msa1106730 | -0.823571 | 1.289018e-53 | -8.615850e-47 |
| Msa0549900 | Msa1108560 | 0.812502 | 4.104176e-51 | -8.615850e-47 |
| Msa0549900 | Msa1111910 | 0.809680 | 1.679002e-50 | -8.615850e-47 |
| Msa0549900 | Msa1115600 | 0.816528 | 5.278687e-52 | -8.615850e-47 |
| Msa0549900 | Msa1118170 | 0.807545 | 4.797384e-50 | -8.615850e-47 |
| Msa0549900 | Msa1120960 | 0.810564 | 1.082446e-50 | -8.615850e-47 |
| Msa0549900 | Msa1122710 | -0.819421 | 1.171800e-52 | -8.615850e-47 |
| Msa0549900 | Msa1124220 | 0.836473 | 9.167116e-57 | -8.615850e-47 |
| Msa0549900 | Msa1127200 | 0.810234 | 1.275654e-50 | -8.615850e-47 |
| Msa0549900 | Msa1130150 | -0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0549900 | Msa1132880 | -0.812374 | 4.378786e-51 | -8.615850e-47 |
| Msa0549900 | Msa1133440 | -0.806945 | 6.427212e-50 | -8.615850e-47 |
| Msa0549900 | Msa1146010 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0549900 | Msa1149910 | 0.814490 | 1.500125e-51 | -8.615850e-47 |
| Msa0549900 | Msa1155610 | 0.803787 | 2.951105e-49 | -8.615850e-47 |
| Msa0549900 | Msa1156430 | -0.811512 | 6.747418e-51 | -8.615850e-47 |
| Msa0549900 | Msa1156720 | 0.827037 | 1.951936e-54 | -8.615850e-47 |
| Msa0549900 | Msa1156730 | 0.817464 | 3.252596e-52 | -8.615850e-47 |
| Msa0549900 | Msa1156740 | 0.851790 | 7.052894e-61 | -8.615850e-47 |
| Msa0549900 | Msa1162430 | 0.814190 | 1.748010e-51 | -8.615850e-47 |
| Msa0549900 | Msa1165460 | 0.817979 | 2.489790e-52 | -8.615850e-47 |
| Msa0549900 | Msa1169600 | -0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa0549900 | Msa1185270 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa0549900 | Msa1191530 | -0.827551 | 1.469651e-54 | -8.615850e-47 |
| Msa0549900 | Msa1192360 | 0.827218 | 1.766748e-54 | -8.615850e-47 |
| Msa0549900 | Msa1193940 | 0.806458 | 8.147216e-50 | -8.615850e-47 |
| Msa0549900 | Msa1197720 | 0.826627 | 2.445137e-54 | -8.615850e-47 |
| Msa0549900 | Msa1203650 | 0.822628 | 2.139616e-53 | -8.615850e-47 |
| Msa0549900 | Msa1204870 | -0.828184 | 1.035410e-54 | -8.615850e-47 |
| Msa0549900 | Msa1204900 | -0.822898 | 1.851751e-53 | -8.615850e-47 |
| Msa0549900 | Msa1205120 | 0.801681 | 8.029264e-49 | -8.615850e-47 |
| Msa0549900 | Msa1205270 | -0.818910 | 1.531504e-52 | -8.615850e-47 |
| Msa0549900 | Msa1209990 | -0.811144 | 8.107944e-51 | -8.615850e-47 |
| Msa0549900 | Msa1215220 | -0.810036 | 1.407224e-50 | -8.615850e-47 |
| Msa0549900 | Msa1215540 | -0.822231 | 2.645373e-53 | -8.615850e-47 |
| Msa0549900 | Msa1217890 | 0.810447 | 1.147735e-50 | -8.615850e-47 |
| Msa0549900 | Msa1220720 | 0.808883 | 2.488496e-50 | -8.615850e-47 |
| Msa0549900 | Msa1223540 | 0.831185 | 1.925854e-55 | -8.615850e-47 |
| Msa0549900 | Msa1223620 | 0.823954 | 1.048900e-53 | -8.615850e-47 |
| Msa0549900 | Msa1223710 | 0.801060 | 1.075890e-48 | -8.615850e-47 |
| Msa0549900 | Msa1223960 | 0.834920 | 2.267801e-56 | -8.615850e-47 |
| Msa0549900 | Msa1223990 | 0.831566 | 1.552401e-55 | -8.615850e-47 |
| Msa0549900 | Msa1225560 | 0.801764 | 7.720162e-49 | -8.615850e-47 |
| Msa0549900 | Msa1231440 | 0.801277 | 9.712436e-49 | -8.615850e-47 |
| Msa0549900 | Msa1246830 | 0.814837 | 1.256954e-51 | -8.615850e-47 |
| Msa0549900 | Msa1255030 | -0.830307 | 3.161303e-55 | -8.615850e-47 |
| Msa0549900 | Msa1255710 | 0.809300 | 2.025595e-50 | -8.615850e-47 |
| Msa0549900 | Msa1255740 | 0.834533 | 2.836352e-56 | -8.615850e-47 |
| Msa0549900 | Msa1256490 | -0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0549900 | Msa1263110 | 0.830804 | 2.389474e-55 | -8.615850e-47 |
| Msa0549900 | Msa1263120 | 0.804558 | 2.039693e-49 | -8.615850e-47 |
| Msa0549900 | Msa1263520 | 0.831687 | 1.449029e-55 | -8.615850e-47 |
| Msa0549900 | Msa1265570 | 0.814762 | 1.305926e-51 | -8.615850e-47 |
| Msa0549900 | Msa1266120 | -0.815406 | 9.395245e-52 | -8.615850e-47 |
| Msa0549900 | Msa1268360 | 0.805203 | 1.494793e-49 | -8.615850e-47 |
| Msa0549900 | Msa1269200 | 0.800747 | 1.246736e-48 | -8.615850e-47 |
| Msa0549900 | Msa1269500 | 0.805171 | 1.518449e-49 | -8.615850e-47 |
| Msa0549900 | Msa1273320 | 0.861500 | 9.821596e-64 | -8.615850e-47 |
| Msa0549900 | Msa1286860 | -0.807667 | 4.519190e-50 | -8.615850e-47 |
| Msa0549900 | Msa1287100 | -0.827320 | 1.669994e-54 | -8.615850e-47 |
| Msa0549900 | Msa1288070 | 0.825274 | 5.124879e-54 | -8.615850e-47 |
| Msa0549900 | Msa1291070 | -0.807191 | 5.702191e-50 | -8.615850e-47 |
| Msa0549900 | Msa1295210 | -0.824275 | 8.818523e-54 | -8.615850e-47 |
| Msa0549900 | Msa1296810 | -0.812576 | 3.954183e-51 | -8.615850e-47 |
| Msa0549900 | Msa1297220 | -0.809399 | 1.929152e-50 | -8.615850e-47 |
| Msa0549900 | Msa1298480 | -0.813574 | 2.389289e-51 | -8.615850e-47 |
| Msa0549900 | Msa1323260 | -0.817942 | 2.538485e-52 | -8.615850e-47 |
| Msa0549900 | Msa1334670 | 0.816822 | 4.535446e-52 | -8.615850e-47 |
| Msa0549900 | Msa1341710 | -0.804873 | 1.752690e-49 | -8.615850e-47 |
| Msa0549900 | Msa1342360 | -0.824039 | 1.001735e-53 | -8.615850e-47 |
| Msa0549900 | Msa1342760 | 0.822773 | 1.980021e-53 | -8.615850e-47 |
| Msa0549900 | Msa1343450 | -0.823175 | 1.595768e-53 | -8.615850e-47 |
| Msa0549900 | Msa1352600 | -0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0549900 | Msa1352630 | -0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0549900 | Msa1355250 | 0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0549900 | Msa1355540 | 0.801065 | 1.073386e-48 | -8.615850e-47 |
| Msa0549900 | Msa1357840 | 0.800554 | 1.364747e-48 | -8.615850e-47 |
| Msa0549900 | Msa1361980 | 0.833316 | 5.718314e-56 | -8.615850e-47 |
| Msa0549900 | Msa1365230 | 0.813464 | 2.526642e-51 | -8.615850e-47 |
| Msa0549900 | Msa1379270 | -0.815229 | 1.028857e-51 | -8.615850e-47 |
| Msa0549900 | Msa1395380 | -0.807860 | 4.112580e-50 | -8.615850e-47 |
| Msa0549900 | Msa1400290 | -0.813786 | 2.146354e-51 | -8.615850e-47 |
| Msa0549900 | Msa1404810 | -0.816375 | 5.712595e-52 | -8.615850e-47 |
| Msa0549900 | Msa1405040 | -0.803326 | 3.677717e-49 | -8.615850e-47 |
| Msa0549900 | Msa1405830 | 0.839294 | 1.726772e-57 | -8.615850e-47 |
| Msa0549900 | Msa1407810 | 0.835315 | 1.802822e-56 | -8.615850e-47 |
| Msa0549900 | Msa1408230 | -0.810349 | 1.204712e-50 | -8.615850e-47 |
| Msa0549900 | Msa1412330 | -0.825247 | 5.202793e-54 | -8.615850e-47 |
| Msa0549900 | Msa1413020 | 0.807203 | 5.668590e-50 | -8.615850e-47 |
| Msa0549900 | Msa1413130 | 0.806180 | 9.321844e-50 | -8.615850e-47 |
| Msa0549900 | Msa1416190 | 0.813744 | 2.192073e-51 | -8.615850e-47 |
| Msa0549900 | Msa1429810 | 0.800871 | 1.175870e-48 | -8.615850e-47 |
| Msa0549900 | Msa1433360 | 0.813857 | 2.070395e-51 | -8.615850e-47 |
| Msa0549900 | Msa1437780 | 0.834750 | 2.501437e-56 | -8.615850e-47 |
| Msa0549900 | Msa1438510 | 0.801711 | 7.916791e-49 | -8.615850e-47 |
| Msa0549900 | Msa1441450 | 0.821636 | 3.634244e-53 | -8.615850e-47 |
| Msa0549900 | Msa1450630 | -0.806066 | 9.850929e-50 | -8.615850e-47 |
| Msa0549900 | Msa1454300 | -0.807322 | 5.349191e-50 | -8.615850e-47 |
| Msa0549900 | Msa1458270 | 0.804271 | 2.340576e-49 | -8.615850e-47 |
| Msa0549900 | Msa1461660 | 0.809125 | 2.208572e-50 | -8.615850e-47 |
| Msa0549900 | Msa1461770 | 0.815381 | 9.519473e-52 | -8.615850e-47 |
| Msa0549900 | Msa1462610 | 0.838955 | 2.114110e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549900 | MtrunA17_Chr4g0034611 | 92.641 | 462 | 9 | 1 | 1 | 462 | 1 | 437 | 0.0 | 880 |
| Msa0549900 | MtrunA17_Chr4g0034621 | 79.482 | 463 | 69 | 2 | 1 | 462 | 1 | 438 | 0.0 | 753 |
| Msa0549900 | MtrunA17_Chr4g0034641 | 76.139 | 461 | 79 | 3 | 1 | 460 | 1 | 431 | 0.0 | 715 |
| Msa0549900 | MtrunA17_Chr4g0034631 | 76.573 | 461 | 75 | 3 | 1 | 460 | 1 | 429 | 0.0 | 711 |
| Msa0549900 | MtrunA17_Chr4g0034651 | 75.000 | 460 | 82 | 2 | 1 | 460 | 34 | 460 | 0.0 | 689 |
| Msa0549900 | MtrunA17_Chr4g0034661 | 75.652 | 460 | 72 | 3 | 1 | 460 | 1 | 420 | 0.0 | 679 |
| Msa0549900 | MtrunA17_Chr1g0154701 | 70.065 | 461 | 105 | 3 | 1 | 461 | 1 | 428 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549900 | AT1G19360.1 | 69.264 | 462 | 107 | 4 | 1 | 461 | 1 | 428 | 0.0 | 650 |
| Msa0549900 | AT1G19360.2 | 69.264 | 462 | 107 | 4 | 1 | 461 | 1 | 428 | 0.0 | 650 |
| Msa0549900 | AT1G75110.1 | 68.251 | 463 | 110 | 4 | 1 | 461 | 1 | 428 | 0.0 | 644 |
| Msa0549900 | AT1G75120.1 | 58.043 | 460 | 135 | 4 | 1 | 460 | 1 | 402 | 0.0 | 532 |
| Msa0549900 | AT1G70630.5 | 28.169 | 213 | 122 | 6 | 173 | 379 | 231 | 418 | 2.00e-13 | 72.8 |
| Msa0549900 | AT1G70630.2 | 28.169 | 213 | 122 | 6 | 173 | 379 | 262 | 449 | 2.47e-13 | 72.4 |
| Msa0549900 | AT1G70630.1 | 28.169 | 213 | 122 | 6 | 173 | 379 | 262 | 449 | 2.47e-13 | 72.4 |
| Msa0549900 | AT1G70630.6 | 28.169 | 213 | 122 | 6 | 173 | 379 | 468 | 655 | 3.59e-13 | 72.4 |
| Msa0549900 | AT1G70630.7 | 28.169 | 213 | 122 | 6 | 173 | 379 | 399 | 586 | 3.60e-13 | 72.4 |
| Msa0549900 | AT1G70630.4 | 28.169 | 213 | 122 | 6 | 173 | 379 | 447 | 634 | 3.69e-13 | 72.4 |
| Msa0549900 | AT1G70630.3 | 28.169 | 213 | 122 | 6 | 173 | 379 | 478 | 665 | 4.05e-13 | 72.0 |
Find 120 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCTTCAATTGAACTTT+TGG | 0.197156 | 4_1:-45154103 | Msa0549900:CDS |
| TTTATGAGCAATTTGAATTA+TGG | 0.204726 | 4_1:-45153674 | Msa0549900:three_prime_UTR |
| ATGAGGATTGTTTCGCATTA+AGG | 0.231351 | 4_1:+45156349 | None:intergenic |
| TCCAATATCTTTGCCAGTCT+TGG | 0.235716 | 4_1:+45154624 | None:intergenic |
| TGAAAATAAAACCTGGGTTT+TGG | 0.240774 | 4_1:+45156190 | None:intergenic |
| TTCATTCGCGGAAGCTTATC+AGG | 0.249563 | 4_1:+45153859 | None:intergenic |
| AACAACTAAGCATGGAAATA+AGG | 0.258713 | 4_1:+45153763 | None:intergenic |
| AGATGGTAGTGTTGTTCTTC+TGG | 0.271544 | 4_1:+45156431 | None:intergenic |
| AATTTGATATCAAGAATATT+TGG | 0.299533 | 4_1:-45156480 | Msa0549900:five_prime_UTR |
| TATACCAACTCTCTTGATAT+TGG | 0.305862 | 4_1:+45154524 | None:intergenic |
| CGTAAGCTGTCATGTTATTA+TGG | 0.320845 | 4_1:+45154229 | None:intergenic |
| AGGATATGGGTTTACAATTC+CGG | 0.324078 | 4_1:-45154147 | Msa0549900:CDS |
| GTTGTGATTGGAGTTCTTAT+TGG | 0.330486 | 4_1:-45156296 | Msa0549900:CDS |
| AGAGATTTGATCATCGGATT+TGG | 0.333126 | 4_1:+45155308 | None:intergenic |
| CTCTGCAAGCCGAAGCCTTT+CGG | 0.335447 | 4_1:+45154770 | None:intergenic |
| ACGCTCATACCATGAGGATA+TGG | 0.335819 | 4_1:-45154161 | Msa0549900:CDS |
| CCCAAGACTGGCAAAGATAT+TGG | 0.338770 | 4_1:-45154625 | Msa0549900:CDS |
| CCAATATCTTTGCCAGTCTT+GGG | 0.362824 | 4_1:+45154625 | None:intergenic |
| TAATTCACGTGAACAATTAC+CGG | 0.366362 | 4_1:+45153886 | None:intergenic |
| AAAATAAATAAAGAGGGAAA+AGG | 0.386345 | 4_1:+45153619 | None:intergenic |
| TCATGCTGCTAGAAGAACTA+TGG | 0.394162 | 4_1:-45153983 | Msa0549900:CDS |
| CGACGAACCTGCGATGGGTT+GGG | 0.394380 | 4_1:-45154190 | Msa0549900:CDS |
| TGAGGATTGTTTCGCATTAA+GGG | 0.394783 | 4_1:+45156350 | None:intergenic |
| CCATCTCAATTCAGTGTTTG+AGG | 0.397352 | 4_1:-45156414 | Msa0549900:five_prime_UTR |
| GATGATGGTATTGACACTAT+TGG | 0.398863 | 4_1:-45154417 | Msa0549900:CDS |
| GGAGGGAACCATGCTGTCTC+CGG | 0.406427 | 4_1:-45154387 | Msa0549900:CDS |
| GTTGTTGAATATTATGTCAA+TGG | 0.415566 | 4_1:-45153832 | Msa0549900:CDS |
| AAGAGACATAGTGGCGCAAT+TGG | 0.431150 | 4_1:-45155331 | Msa0549900:CDS |
| CAATTCAGTGTTTGAGGTGG+TGG | 0.433911 | 4_1:-45156408 | Msa0549900:five_prime_UTR |
| TCGACGAACCTGCGATGGGT+TGG | 0.436451 | 4_1:-45154191 | Msa0549900:CDS |
| GGGAGTTGACCGAAAGGCTT+CGG | 0.438259 | 4_1:-45154779 | Msa0549900:CDS |
| GGTTACCAATCTGAGCCATC+AGG | 0.443252 | 4_1:+45153784 | None:intergenic |
| ATAGTGTCAATACCATCATC+TGG | 0.444142 | 4_1:+45154420 | None:intergenic |
| ATACAATGTCAACGTCTGAT+AGG | 0.444574 | 4_1:+45154313 | None:intergenic |
| CCGTCACACCCTGGTTATGA+AGG | 0.446141 | 4_1:-45154009 | Msa0549900:CDS |
| ATTGTTACCGCTGTTGTGAT+TGG | 0.448923 | 4_1:-45156308 | Msa0549900:CDS |
| AATCGTCGCATCCATGTTGT+TGG | 0.454605 | 4_1:-45156215 | Msa0549900:CDS |
| GTTATTATGGCCATCGCTCA+TGG | 0.461921 | 4_1:+45154242 | None:intergenic |
| CATAATAACATGACAGCTTA+CGG | 0.462428 | 4_1:-45154228 | Msa0549900:CDS |
| AAATAAATAAAGAGGGAAAA+GGG | 0.465933 | 4_1:+45153620 | None:intergenic |
| CTCATTCTCTACGCAAATCA+AGG | 0.468828 | 4_1:-45156331 | Msa0549900:CDS |
| CAAAAGTTCAATTGAAGGAA+TGG | 0.471345 | 4_1:+45154104 | None:intergenic |
| CATGTTAAAATCAGAGTTTG+TGG | 0.477132 | 4_1:-45154841 | Msa0549900:CDS |
| TTGTTGAATATTATGTCAAT+GGG | 0.480177 | 4_1:-45153831 | Msa0549900:CDS |
| AAAGAGTTCCTCGTTGAAAA+CGG | 0.480750 | 4_1:+45154035 | None:intergenic |
| CTTTCCCTGATGGCTCAGAT+TGG | 0.480932 | 4_1:-45153789 | Msa0549900:CDS |
| CTTGATTTGCGTAGAGAATG+AGG | 0.482124 | 4_1:+45156332 | None:intergenic |
| TAAAGGAGATGCTCGAGGTC+TGG | 0.483638 | 4_1:-45154551 | Msa0549900:CDS |
| TCAACAACTGCTTTCATTCG+CGG | 0.485251 | 4_1:+45153847 | None:intergenic |
| TTGGTCCCATGCGACCTCCT+TGG | 0.491130 | 4_1:+45154059 | None:intergenic |
| CGCTCATACCATGAGGATAT+GGG | 0.494439 | 4_1:-45154160 | Msa0549900:CDS |
| TGGTCTGATATAGAAGAAAC+CGG | 0.496586 | 4_1:+45154128 | None:intergenic |
| TACAAAAGAGACCCAGATGA+TGG | 0.498054 | 4_1:-45154432 | Msa0549900:CDS |
| TTGAGAAACGAAGAAGCCAT+TGG | 0.498194 | 4_1:+45156250 | None:intergenic |
| TGAGAAACGAAGAAGCCATT+GGG | 0.499912 | 4_1:+45156251 | None:intergenic |
| ACTTGCAAATTCCAATGTAA+AGG | 0.500585 | 4_1:-45154568 | Msa0549900:CDS |
| ATCGGGAACAACAGTAGGAT+TGG | 0.505029 | 4_1:+45154659 | None:intergenic |
| TCACGGTATAGATGATCAAA+AGG | 0.505121 | 4_1:+45154279 | None:intergenic |
| AGTTCAATTGAAGGAATGGT+TGG | 0.506067 | 4_1:+45154108 | None:intergenic |
| TGGTGGTAGCTACAATGATT+GGG | 0.510224 | 4_1:-45156391 | Msa0549900:exon |
| TCTTGGGTTCACAGATTCAT+CGG | 0.511020 | 4_1:+45154641 | None:intergenic |
| AACAGGAGAGATTTGATCAT+CGG | 0.511844 | 4_1:+45155302 | None:intergenic |
| AGGCTTCGGCTTGCAGAGCA+AGG | 0.512498 | 4_1:-45154765 | Msa0549900:CDS |
| CACAGAGAAAATAAATAAAG+AGG | 0.512601 | 4_1:+45153612 | None:intergenic |
| GGCTTTCCAAGGAGGTCGCA+TGG | 0.512608 | 4_1:-45154065 | Msa0549900:CDS |
| CTTGGGTTCACAGATTCATC+GGG | 0.514137 | 4_1:+45154642 | None:intergenic |
| TAACCTCAGTAAATTGAAAC+CGG | 0.514324 | 4_1:-45153905 | Msa0549900:CDS |
| CGGTCCAAAAGTTCAATTGA+AGG | 0.515275 | 4_1:+45154099 | None:intergenic |
| GAGGGAACCATGCTGTCTCC+GGG | 0.515651 | 4_1:-45154386 | Msa0549900:CDS |
| CTCGAGCATCTCCTTTACAT+TGG | 0.523884 | 4_1:+45154557 | None:intergenic |
| GCATGAAGCCCTTCATAACC+AGG | 0.525971 | 4_1:+45154000 | None:intergenic |
| GTGGTGGTAGCTACAATGAT+TGG | 0.527281 | 4_1:-45156392 | Msa0549900:exon |
| CTTGACAGTACCAAAAGGTC+CGG | 0.528458 | 4_1:+45154692 | None:intergenic |
| AAACTTGCAGTCTCAAAATG+AGG | 0.531707 | 4_1:+45153645 | None:intergenic |
| CAATCTGAGCCATCAGGGAA+AGG | 0.542774 | 4_1:+45153790 | None:intergenic |
| TGTCTTCGACGAACCTGCGA+TGG | 0.554872 | 4_1:-45154196 | Msa0549900:CDS |
| TGAATCTGTGAACCCAAGAC+TGG | 0.555469 | 4_1:-45154637 | Msa0549900:CDS |
| GTCTTCGACGAACCTGCGAT+GGG | 0.565135 | 4_1:-45154195 | Msa0549900:CDS |
| TATCGAGCCCAACCCATCGC+AGG | 0.565521 | 4_1:+45154183 | None:intergenic |
| GCTTTCCAAGGAGGTCGCAT+GGG | 0.571535 | 4_1:-45154064 | Msa0549900:CDS |
| TTTCATTAGTGATAATGCAT+AGG | 0.571913 | 4_1:-45153720 | Msa0549900:three_prime_UTR |
| TAGAATACGAAATTTAAGCC+CGG | 0.575223 | 4_1:+45154368 | None:intergenic |
| AATCCCTTGACAGTACCAAA+AGG | 0.575926 | 4_1:+45154687 | None:intergenic |
| GTTCCTCGTTGAAAACGGCT+TGG | 0.577634 | 4_1:+45154040 | None:intergenic |
| TAACATGTTGACTCTATCTG+AGG | 0.578577 | 4_1:+45154857 | None:intergenic |
| TAGTGATAATGCATAGGTGT+AGG | 0.579128 | 4_1:-45153714 | Msa0549900:three_prime_UTR |
| TGTAGCAACACGGCTTTCCA+AGG | 0.581666 | 4_1:-45154076 | Msa0549900:CDS |
| TGGAAAGCCGTGTTGCTACA+CGG | 0.587855 | 4_1:+45154079 | None:intergenic |
| GATTCATCGGGAACAACAGT+AGG | 0.588765 | 4_1:+45154654 | None:intergenic |
| ACAGAGAAAATAAATAAAGA+GGG | 0.592227 | 4_1:+45153613 | None:intergenic |
| GCTCTCAAACCTTTCCCTGA+TGG | 0.593787 | 4_1:-45153799 | Msa0549900:CDS |
| TTCACCAATATCAAGAGAGT+TGG | 0.596908 | 4_1:-45154528 | Msa0549900:CDS |
| TCATTCGCGGAAGCTTATCA+GGG | 0.598350 | 4_1:+45153860 | None:intergenic |
| CCTTCATAACCAGGGTGTGA+CGG | 0.602424 | 4_1:+45154009 | None:intergenic |
| TAGTGTCAATACCATCATCT+GGG | 0.602710 | 4_1:+45154421 | None:intergenic |
| ATTGTAAACCCATATCCTCA+TGG | 0.612377 | 4_1:+45154152 | None:intergenic |
| CGTCACACCCTGGTTATGAA+GGG | 0.614212 | 4_1:-45154008 | Msa0549900:CDS |
| GTTACCAATCTGAGCCATCA+GGG | 0.614642 | 4_1:+45153785 | None:intergenic |
| ATTTAAGCCCGGAGACAGCA+TGG | 0.617136 | 4_1:+45154379 | None:intergenic |
| AACTTGCAGTCTCAAAATGA+GGG | 0.619293 | 4_1:+45153646 | None:intergenic |
| CCTCAAACACTGAATTGAGA+TGG | 0.625860 | 4_1:+45156414 | None:intergenic |
| GATGTTGAGTCCATGAGCGA+TGG | 0.626600 | 4_1:-45154252 | Msa0549900:CDS |
| TGTTGTTGGATCCAAAACCC+AGG | 0.631167 | 4_1:-45156201 | Msa0549900:intron |
| GACACTATTGGAAAACAAGG+AGG | 0.637402 | 4_1:-45154405 | Msa0549900:CDS |
| GGCTTCGGCTTGCAGAGCAA+GGG | 0.638726 | 4_1:-45154764 | Msa0549900:CDS |
| TATGCAATCAAGAGACATAG+TGG | 0.643061 | 4_1:-45155340 | Msa0549900:CDS |
| ATTGGGCGCAGAGAAAGAGA+AGG | 0.643934 | 4_1:-45156374 | Msa0549900:CDS |
| ATTGACACTATTGGAAAACA+AGG | 0.644166 | 4_1:-45154408 | Msa0549900:CDS |
| TGGACTCAACATCTGAATCA+CGG | 0.646362 | 4_1:+45154262 | None:intergenic |
| ACACTATTGGAAAACAAGGA+GGG | 0.646374 | 4_1:-45154404 | Msa0549900:CDS |
| TGCAGAGCAAGGGAAAGACC+AGG | 0.647246 | 4_1:-45154754 | Msa0549900:CDS |
| AGGTGAGGGAGTTGACCGAA+AGG | 0.647633 | 4_1:-45154785 | Msa0549900:CDS |
| TCTCAATTCAGTGTTTGAGG+TGG | 0.654279 | 4_1:-45156411 | Msa0549900:five_prime_UTR |
| TTACCGGTTTCAATTTACTG+AGG | 0.679795 | 4_1:+45153902 | None:intergenic |
| CTCGATACGCTCATACCATG+AGG | 0.687908 | 4_1:-45154167 | Msa0549900:CDS |
| CATGAAGCCCTTCATAACCA+GGG | 0.689336 | 4_1:+45154001 | None:intergenic |
| TTCGCGGAAGCTTATCAGGG+TGG | 0.692799 | 4_1:+45153863 | None:intergenic |
| CAATGTAAAGGAGATGCTCG+AGG | 0.695514 | 4_1:-45154556 | Msa0549900:CDS |
| AGCAACACGGCTTTCCAAGG+AGG | 0.700999 | 4_1:-45154073 | Msa0549900:CDS |
| AAGAACTCCAATCACAACAG+CGG | 0.710718 | 4_1:+45156301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATATCAAGAATATT+TGG | - | chr4_1:45153516-45153535 | Msa0549900:three_prime_UTR | 15.0% |
| !!! | TTTCTTTCATTTTTGAATTT+TGG | - | chr4_1:45153852-45153871 | Msa0549900:CDS | 15.0% |
| !!! | TTCTTTCATTTTTGAATTTT+GGG | - | chr4_1:45153853-45153872 | Msa0549900:CDS | 15.0% |
| !! | AAAAAATGAAAACAAATAAC+AGG | + | chr4_1:45154714-45154733 | None:intergenic | 15.0% |
| !!! | CTATTTTCTCAAATTATTAT+TGG | - | chr4_1:45154866-45154885 | Msa0549900:CDS | 15.0% |
| !!! | TTGATGCTTTTAATAATTGT+GGG | - | chr4_1:45153995-45154014 | Msa0549900:CDS | 20.0% |
| !!! | TTTCAGAATTTTAGAATTGT+GGG | - | chr4_1:45154091-45154110 | Msa0549900:CDS | 20.0% |
| !! | ATTTGTTTATATTGGAGATT+TGG | - | chr4_1:45154167-45154186 | Msa0549900:CDS | 20.0% |
| !! | TTTGTTTATATTGGAGATTT+GGG | - | chr4_1:45154168-45154187 | Msa0549900:CDS | 20.0% |
| !! | TTCATAGTTTATTGATAAGT+GGG | - | chr4_1:45154532-45154551 | Msa0549900:CDS | 20.0% |
| !!! | TTTTCTCAAATTATTATTGG+TGG | - | chr4_1:45154869-45154888 | Msa0549900:CDS | 20.0% |
| !! | TTGTTGAATATTATGTCAAT+GGG | - | chr4_1:45156165-45156184 | Msa0549900:intron | 20.0% |
| !! | TTTATGAGCAATTTGAATTA+TGG | - | chr4_1:45156322-45156341 | Msa0549900:CDS | 20.0% |
| !! | AAATAAATAAAGAGGGAAAA+GGG | + | chr4_1:45156379-45156398 | None:intergenic | 20.0% |
| !! | AAAATAAATAAAGAGGGAAA+AGG | + | chr4_1:45156380-45156399 | None:intergenic | 20.0% |
| !! | ACAGAGAAAATAAATAAAGA+GGG | + | chr4_1:45156386-45156405 | None:intergenic | 20.0% |
| ! | CTTTGATGAAAATAAAACCT+GGG | + | chr4_1:45153815-45153834 | None:intergenic | 25.0% |
| ! | TCTTTGATGAAAATAAAACC+TGG | + | chr4_1:45153816-45153835 | None:intergenic | 25.0% |
| !!! | CACAATTATTAAAAGCATCA+AGG | + | chr4_1:45153996-45154015 | None:intergenic | 25.0% |
| !! | CTTGATGCTTTTAATAATTG+TGG | - | chr4_1:45153994-45154013 | Msa0549900:CDS | 25.0% |
| !!! | GTTTCAGAATTTTAGAATTG+TGG | - | chr4_1:45154090-45154109 | Msa0549900:CDS | 25.0% |
| ! | TTTGAATCTATAGTTCAATG+TGG | - | chr4_1:45154131-45154150 | Msa0549900:CDS | 25.0% |
| ! | ATAAACAAATGTAGGCAAAA+TGG | + | chr4_1:45154157-45154176 | None:intergenic | 25.0% |
| ! | TTGCCTACATTTGTTTATAT+TGG | - | chr4_1:45154159-45154178 | Msa0549900:CDS | 25.0% |
| ! | TCTCCAATATAAACAAATGT+AGG | + | chr4_1:45154165-45154184 | None:intergenic | 25.0% |
| ! | GTTCATAGTTTATTGATAAG+TGG | - | chr4_1:45154531-45154550 | Msa0549900:CDS | 25.0% |
| !!! | ATACCTGTTTTCTTTTGAAA+TGG | - | chr4_1:45154810-45154829 | Msa0549900:CDS | 25.0% |
| !!! | TACCTGTTTTCTTTTGAAAT+GGG | - | chr4_1:45154811-45154830 | Msa0549900:CDS | 25.0% |
| !!! | AACATTTGTTTTTGTTTCAC+TGG | - | chr4_1:45155014-45155033 | Msa0549900:intron | 25.0% |
| !!! | TATCATGATTTTTTTTTGCC+AGG | - | chr4_1:45155095-45155114 | Msa0549900:intron | 25.0% |
| ! | GTTGTTGAATATTATGTCAA+TGG | - | chr4_1:45156164-45156183 | Msa0549900:intron | 25.0% |
| !! | TTTCATTAGTGATAATGCAT+AGG | - | chr4_1:45156276-45156295 | Msa0549900:CDS | 25.0% |
| ! | CACAGAGAAAATAAATAAAG+AGG | + | chr4_1:45156387-45156406 | None:intergenic | 25.0% |
| !!! | CTCTTTATTTATTTTCTCTG+TGG | - | chr4_1:45156385-45156404 | Msa0549900:exon | 25.0% |
| !! | TTATTTTCTCTGTGGTTTTT+TGG | - | chr4_1:45156393-45156412 | Msa0549900:exon | 25.0% |
| !!! | TTAGCTTTCTTTTTTCCCAA+TGG | - | chr4_1:45153730-45153749 | Msa0549900:three_prime_UTR | 30.0% |
| ! | TGAAAATAAAACCTGGGTTT+TGG | + | chr4_1:45153809-45153828 | None:intergenic | 30.0% |
| TTAATAATTGTGGGTCATTG+TGG | - | chr4_1:45154004-45154023 | Msa0549900:CDS | 30.0% | |
| TCACAAATGCTTAAGTTTAG+AGG | - | chr4_1:45154221-45154240 | Msa0549900:CDS | 30.0% | |
| GCTTAAGTTTAGAGGTTTAT+AGG | - | chr4_1:45154229-45154248 | Msa0549900:CDS | 30.0% | |
| ! | AACCATTTTGTGACAACTTT+TGG | - | chr4_1:45154304-45154323 | Msa0549900:CDS | 30.0% |
| ! | ACCATTTTGTGACAACTTTT+GGG | - | chr4_1:45154305-45154324 | Msa0549900:CDS | 30.0% |
| CCATAAAAGAGAGAAGAATA+AGG | + | chr4_1:45154335-45154354 | None:intergenic | 30.0% | |
| ! | CCTTATTCTTCTCTCTTTTA+TGG | - | chr4_1:45154332-45154351 | Msa0549900:CDS | 30.0% |
| GATATTTGTACAACCATTCT+GGG | + | chr4_1:45154451-45154470 | None:intergenic | 30.0% | |
| TGATATTTGTACAACCATTC+TGG | + | chr4_1:45154452-45154471 | None:intergenic | 30.0% | |
| TAGTTTATTGATAAGTGGGT+AGG | - | chr4_1:45154536-45154555 | Msa0549900:CDS | 30.0% | |
| AGCATAGGGTTTAAATACTA+AGG | + | chr4_1:45154609-45154628 | None:intergenic | 30.0% | |
| CTTTCTATCATTCAAGCATA+GGG | + | chr4_1:45154623-45154642 | None:intergenic | 30.0% | |
| !!! | ACCTGTTTTCTTTTGAAATG+GGG | - | chr4_1:45154812-45154831 | Msa0549900:CDS | 30.0% |
| ATGTTTGTCTATACAAGTCA+AGG | + | chr4_1:45154999-45155018 | None:intergenic | 30.0% | |
| !!! | GTTTTTGTTTCACTGGTTTT+TGG | - | chr4_1:45155021-45155040 | Msa0549900:intron | 30.0% |
| !!! | TGGTTTTTGGTTTACAAGAT+GGG | - | chr4_1:45155034-45155053 | Msa0549900:intron | 30.0% |
| ! | TGTCTGTTATTCATCTTTTC+TGG | + | chr4_1:45155068-45155087 | None:intergenic | 30.0% |
| CATGTTAAAATCAGAGTTTG+TGG | - | chr4_1:45155155-45155174 | Msa0549900:intron | 30.0% | |
| CAAAAACAGTTTCTTGCATT+AGG | - | chr4_1:45155267-45155286 | Msa0549900:intron | 30.0% | |
| TTAGGTAAACAAGAAAAAGC+CGG | - | chr4_1:45155285-45155304 | Msa0549900:intron | 30.0% | |
| ACTTGCAAATTCCAATGTAA+AGG | - | chr4_1:45155428-45155447 | Msa0549900:intron | 30.0% | |
| TATACCAACTCTCTTGATAT+TGG | + | chr4_1:45155475-45155494 | None:intergenic | 30.0% | |
| ATTGACACTATTGGAAAACA+AGG | - | chr4_1:45155588-45155607 | Msa0549900:intron | 30.0% | |
| TAGAATACGAAATTTAAGCC+CGG | + | chr4_1:45155631-45155650 | None:intergenic | 30.0% | |
| ! | TCTAAGAGAATTTTTGCAGT+TGG | - | chr4_1:45155647-45155666 | Msa0549900:intron | 30.0% |
| ! | CTAAGAGAATTTTTGCAGTT+GGG | - | chr4_1:45155648-45155667 | Msa0549900:intron | 30.0% |
| CATAATAACATGACAGCTTA+CGG | - | chr4_1:45155768-45155787 | Msa0549900:intron | 30.0% | |
| CAAAAGTTCAATTGAAGGAA+TGG | + | chr4_1:45155895-45155914 | None:intergenic | 30.0% | |
| ! | CATTCCTTCAATTGAACTTT+TGG | - | chr4_1:45155893-45155912 | Msa0549900:intron | 30.0% |
| TAACCTCAGTAAATTGAAAC+CGG | - | chr4_1:45156091-45156110 | Msa0549900:intron | 30.0% | |
| TAATTCACGTGAACAATTAC+CGG | + | chr4_1:45156113-45156132 | None:intergenic | 30.0% | |
| AACAACTAAGCATGGAAATA+AGG | + | chr4_1:45156236-45156255 | None:intergenic | 30.0% | |
| TGAGGATTGTTTCGCATTAA+GGG | + | chr4_1:45153649-45153668 | None:intergenic | 35.0% | |
| ATGAGGATTGTTTCGCATTA+AGG | + | chr4_1:45153650-45153669 | None:intergenic | 35.0% | |
| GTTGTGATTGGAGTTCTTAT+TGG | - | chr4_1:45153700-45153719 | Msa0549900:three_prime_UTR | 35.0% | |
| TCCCAAAAGTTGTCACAAAA+TGG | + | chr4_1:45154309-45154328 | None:intergenic | 35.0% | |
| ACTTGTGGTTACATGTTGTT+GGG | - | chr4_1:45154504-45154523 | Msa0549900:CDS | 35.0% | |
| CCTTTCTATCATTCAAGCAT+AGG | + | chr4_1:45154624-45154643 | None:intergenic | 35.0% | |
| CCTATGCTTGAATGATAGAA+AGG | - | chr4_1:45154621-45154640 | Msa0549900:CDS | 35.0% | |
| TATGCAATCAAGAGACATAG+TGG | - | chr4_1:45154656-45154675 | Msa0549900:CDS | 35.0% | |
| AGAGATTTGATCATCGGATT+TGG | + | chr4_1:45154691-45154710 | None:intergenic | 35.0% | |
| AACAGGAGAGATTTGATCAT+CGG | + | chr4_1:45154697-45154716 | None:intergenic | 35.0% | |
| ACCCCATTTCAAAAGAAAAC+AGG | + | chr4_1:45154816-45154835 | None:intergenic | 35.0% | |
| !! | CAAATTATTATTGGTGGCGT+TGG | - | chr4_1:45154875-45154894 | Msa0549900:CDS | 35.0% |
| TTGAGCACTAACACAAACAT+TGG | + | chr4_1:45154928-45154947 | None:intergenic | 35.0% | |
| AGTGCTCAATAGTTTATGAG+CGG | - | chr4_1:45154939-45154958 | Msa0549900:intron | 35.0% | |
| !!! | CTGGTTTTTGGTTTACAAGA+TGG | - | chr4_1:45155033-45155052 | Msa0549900:intron | 35.0% |
| !!! | GGTTTTTGGTTTACAAGATG+GGG | - | chr4_1:45155035-45155054 | Msa0549900:intron | 35.0% |
| !! | TAACATGTTGACTCTATCTG+AGG | + | chr4_1:45155142-45155161 | None:intergenic | 35.0% |
| AAATGCTGAGCTGAAAAAAC+AGG | - | chr4_1:45155191-45155210 | Msa0549900:intron | 35.0% | |
| TTCACCAATATCAAGAGAGT+TGG | - | chr4_1:45155468-45155487 | Msa0549900:intron | 35.0% | |
| ! | CTGGGTCTCTTTTGTAAAAT+GGG | + | chr4_1:45155560-45155579 | None:intergenic | 35.0% |
| ! | TCTGGGTCTCTTTTGTAAAA+TGG | + | chr4_1:45155561-45155580 | None:intergenic | 35.0% |
| TAGTGTCAATACCATCATCT+GGG | + | chr4_1:45155578-45155597 | None:intergenic | 35.0% | |
| ATAGTGTCAATACCATCATC+TGG | + | chr4_1:45155579-45155598 | None:intergenic | 35.0% | |
| !! | GATGATGGTATTGACACTAT+TGG | - | chr4_1:45155579-45155598 | Msa0549900:intron | 35.0% |
| ACACTATTGGAAAACAAGGA+GGG | - | chr4_1:45155592-45155611 | Msa0549900:intron | 35.0% | |
| ATACAATGTCAACGTCTGAT+AGG | + | chr4_1:45155686-45155705 | None:intergenic | 35.0% | |
| TCACGGTATAGATGATCAAA+AGG | + | chr4_1:45155720-45155739 | None:intergenic | 35.0% | |
| CGTAAGCTGTCATGTTATTA+TGG | + | chr4_1:45155770-45155789 | None:intergenic | 35.0% | |
| ATTGTAAACCCATATCCTCA+TGG | + | chr4_1:45155847-45155866 | None:intergenic | 35.0% | |
| AGGATATGGGTTTACAATTC+CGG | - | chr4_1:45155849-45155868 | Msa0549900:intron | 35.0% | |
| TGGTCTGATATAGAAGAAAC+CGG | + | chr4_1:45155871-45155890 | None:intergenic | 35.0% | |
| AGTTCAATTGAAGGAATGGT+TGG | + | chr4_1:45155891-45155910 | None:intergenic | 35.0% | |
| AAAGAGTTCCTCGTTGAAAA+CGG | + | chr4_1:45155964-45155983 | None:intergenic | 35.0% | |
| !! | AAGTTCTTTTCAAGACAGTG+AGG | - | chr4_1:45156060-45156079 | Msa0549900:intron | 35.0% |
| !! | TTACCGGTTTCAATTTACTG+AGG | + | chr4_1:45156097-45156116 | None:intergenic | 35.0% |
| !! | CTGTTTTGAACAACTAAGCA+TGG | + | chr4_1:45156244-45156263 | None:intergenic | 35.0% |
| ! | TAGTGATAATGCATAGGTGT+AGG | - | chr4_1:45156282-45156301 | Msa0549900:CDS | 35.0% |
| AACTTGCAGTCTCAAAATGA+GGG | + | chr4_1:45156353-45156372 | None:intergenic | 35.0% | |
| AAACTTGCAGTCTCAAAATG+AGG | + | chr4_1:45156354-45156373 | None:intergenic | 35.0% | |
| ! | AGATGGTAGTGTTGTTCTTC+TGG | + | chr4_1:45153568-45153587 | None:intergenic | 40.0% |
| CCTCAAACACTGAATTGAGA+TGG | + | chr4_1:45153585-45153604 | None:intergenic | 40.0% | |
| CCATCTCAATTCAGTGTTTG+AGG | - | chr4_1:45153582-45153601 | Msa0549900:three_prime_UTR | 40.0% | |
| TCTCAATTCAGTGTTTGAGG+TGG | - | chr4_1:45153585-45153604 | Msa0549900:three_prime_UTR | 40.0% | |
| TGGTGGTAGCTACAATGATT+GGG | - | chr4_1:45153605-45153624 | Msa0549900:three_prime_UTR | 40.0% | |
| !! | CTTGATTTGCGTAGAGAATG+AGG | + | chr4_1:45153667-45153686 | None:intergenic | 40.0% |
| CTCATTCTCTACGCAAATCA+AGG | - | chr4_1:45153665-45153684 | Msa0549900:three_prime_UTR | 40.0% | |
| ATTGTTACCGCTGTTGTGAT+TGG | - | chr4_1:45153688-45153707 | Msa0549900:three_prime_UTR | 40.0% | |
| AAGAACTCCAATCACAACAG+CGG | + | chr4_1:45153698-45153717 | None:intergenic | 40.0% | |
| TGAGAAACGAAGAAGCCATT+GGG | + | chr4_1:45153748-45153767 | None:intergenic | 40.0% | |
| TTGAGAAACGAAGAAGCCAT+TGG | + | chr4_1:45153749-45153768 | None:intergenic | 40.0% | |
| !! | GAGATTTGGGTTGTTAGATG+TGG | - | chr4_1:45154181-45154200 | Msa0549900:CDS | 40.0% |
| !! | AACCATTCTGGGACAACTTT+CGG | + | chr4_1:45154440-45154459 | None:intergenic | 40.0% |
| TCTCAAAAGTTTGCGAGTGT+CGG | - | chr4_1:45154474-45154493 | Msa0549900:CDS | 40.0% | |
| GACTTGTGGTTACATGTTGT+TGG | - | chr4_1:45154503-45154522 | Msa0549900:CDS | 40.0% | |
| TGGTTACATGTTGTTGGGTA+TGG | - | chr4_1:45154509-45154528 | Msa0549900:CDS | 40.0% | |
| TGAGCTGAAAAAACAGGTGA+GGG | - | chr4_1:45155197-45155216 | Msa0549900:intron | 40.0% | |
| !!! | CAAGAAACTGTTTTTGAGCC+TGG | + | chr4_1:45155263-45155282 | None:intergenic | 40.0% |
| AATCCCTTGACAGTACCAAA+AGG | + | chr4_1:45155312-45155331 | None:intergenic | 40.0% | |
| TCTTGGGTTCACAGATTCAT+CGG | + | chr4_1:45155358-45155377 | None:intergenic | 40.0% | |
| CCAATATCTTTGCCAGTCTT+GGG | + | chr4_1:45155374-45155393 | None:intergenic | 40.0% | |
| TCCAATATCTTTGCCAGTCT+TGG | + | chr4_1:45155375-45155394 | None:intergenic | 40.0% | |
| TACAAAAGAGACCCAGATGA+TGG | - | chr4_1:45155564-45155583 | Msa0549900:intron | 40.0% | |
| GACACTATTGGAAAACAAGG+AGG | - | chr4_1:45155591-45155610 | Msa0549900:intron | 40.0% | |
| TGGACTCAACATCTGAATCA+CGG | + | chr4_1:45155737-45155756 | None:intergenic | 40.0% | |
| CGGTCCAAAAGTTCAATTGA+AGG | + | chr4_1:45155900-45155919 | None:intergenic | 40.0% | |
| TCATGCTGCTAGAAGAACTA+TGG | - | chr4_1:45156013-45156032 | Msa0549900:intron | 40.0% | |
| TCAACAACTGCTTTCATTCG+CGG | + | chr4_1:45156152-45156171 | None:intergenic | 40.0% | |
| !! | TTTTGGTACTTGCTCTAAGC+TGG | - | chr4_1:45156410-45156429 | Msa0549900:five_prime_UTR | 40.0% |
| ! | CAATTCAGTGTTTGAGGTGG+TGG | - | chr4_1:45153588-45153607 | Msa0549900:three_prime_UTR | 45.0% |
| GTGGTGGTAGCTACAATGAT+TGG | - | chr4_1:45153604-45153623 | Msa0549900:three_prime_UTR | 45.0% | |
| AATCGTCGCATCCATGTTGT+TGG | - | chr4_1:45153781-45153800 | Msa0549900:exon | 45.0% | |
| !!! | GGGTTTTGGATCCAACAACA+TGG | + | chr4_1:45153795-45153814 | None:intergenic | 45.0% |
| TGTTGTTGGATCCAAAACCC+AGG | - | chr4_1:45153795-45153814 | Msa0549900:CDS | 45.0% | |
| ! | AGTGTCGGATACTTGACTTG+TGG | - | chr4_1:45154489-45154508 | Msa0549900:CDS | 45.0% |
| AAGAGACATAGTGGCGCAAT+TGG | - | chr4_1:45154665-45154684 | Msa0549900:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4_1:45154762-45154781 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4_1:45154763-45154782 | None:intergenic | 45.0% |
| !! | TTGGTGCTACCTGTGAAAGT+CGG | - | chr4_1:45154894-45154913 | Msa0549900:intron | 45.0% |
| CTGAGCTGAAAAAACAGGTG+AGG | - | chr4_1:45155196-45155215 | Msa0549900:intron | 45.0% | |
| ! | CAAGAAAAAGCCGGACCTTT+TGG | - | chr4_1:45155294-45155313 | Msa0549900:intron | 45.0% |
| CTTGACAGTACCAAAAGGTC+CGG | + | chr4_1:45155307-45155326 | None:intergenic | 45.0% | |
| ! | GGACCTTTTGGTACTGTCAA+GGG | - | chr4_1:45155306-45155325 | Msa0549900:CDS | 45.0% |
| ATCGGGAACAACAGTAGGAT+TGG | + | chr4_1:45155340-45155359 | None:intergenic | 45.0% | |
| GATTCATCGGGAACAACAGT+AGG | + | chr4_1:45155345-45155364 | None:intergenic | 45.0% | |
| CTTGGGTTCACAGATTCATC+GGG | + | chr4_1:45155357-45155376 | None:intergenic | 45.0% | |
| TGAATCTGTGAACCCAAGAC+TGG | - | chr4_1:45155359-45155378 | Msa0549900:CDS | 45.0% | |
| CCCAAGACTGGCAAAGATAT+TGG | - | chr4_1:45155371-45155390 | Msa0549900:intron | 45.0% | |
| CTCGAGCATCTCCTTTACAT+TGG | + | chr4_1:45155442-45155461 | None:intergenic | 45.0% | |
| CAATGTAAAGGAGATGCTCG+AGG | - | chr4_1:45155440-45155459 | Msa0549900:intron | 45.0% | |
| GTTATTATGGCCATCGCTCA+TGG | + | chr4_1:45155757-45155776 | None:intergenic | 45.0% | |
| ACGCTCATACCATGAGGATA+TGG | - | chr4_1:45155835-45155854 | Msa0549900:intron | 45.0% | |
| CGCTCATACCATGAGGATAT+GGG | - | chr4_1:45155836-45155855 | Msa0549900:intron | 45.0% | |
| ! | TTTTGGACCGTGTAGCAACA+CGG | - | chr4_1:45155910-45155929 | Msa0549900:intron | 45.0% |
| CATGAAGCCCTTCATAACCA+GGG | + | chr4_1:45155998-45156017 | None:intergenic | 45.0% | |
| TCATTCGCGGAAGCTTATCA+GGG | + | chr4_1:45156139-45156158 | None:intergenic | 45.0% | |
| TTCATTCGCGGAAGCTTATC+AGG | + | chr4_1:45156140-45156159 | None:intergenic | 45.0% | |
| GTTACCAATCTGAGCCATCA+GGG | + | chr4_1:45156214-45156233 | None:intergenic | 45.0% | |
| ATTGGGCGCAGAGAAAGAGA+AGG | - | chr4_1:45153622-45153641 | Msa0549900:three_prime_UTR | 50.0% | |
| GTCCGAAAGTTGTCCCAGAA+TGG | - | chr4_1:45154435-45154454 | Msa0549900:CDS | 50.0% | |
| TTTGAACCGACCCCACTTAG+TGG | - | chr4_1:45154749-45154768 | Msa0549900:CDS | 50.0% | |
| TTGAACCGACCCCACTTAGT+GGG | - | chr4_1:45154750-45154769 | Msa0549900:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4_1:45154758-45154777 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4_1:45154764-45154783 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4_1:45154761-45154780 | Msa0549900:CDS | 50.0% | |
| !! | GACACAGTACCGACTTTCAC+AGG | + | chr4_1:45154906-45154925 | None:intergenic | 50.0% |
| CACATTCAGCTGAGTTTGCC+TGG | + | chr4_1:45155116-45155135 | None:intergenic | 50.0% | |
| ! | CGGACCTTTTGGTACTGTCA+AGG | - | chr4_1:45155305-45155324 | Msa0549900:CDS | 50.0% |
| TAAAGGAGATGCTCGAGGTC+TGG | - | chr4_1:45155445-45155464 | Msa0549900:intron | 50.0% | |
| ATTTAAGCCCGGAGACAGCA+TGG | + | chr4_1:45155620-45155639 | None:intergenic | 50.0% | |
| GATGTTGAGTCCATGAGCGA+TGG | - | chr4_1:45155744-45155763 | Msa0549900:intron | 50.0% | |
| CTCGATACGCTCATACCATG+AGG | - | chr4_1:45155829-45155848 | Msa0549900:intron | 50.0% | |
| ! | TGGAAAGCCGTGTTGCTACA+CGG | + | chr4_1:45155920-45155939 | None:intergenic | 50.0% |
| TGTAGCAACACGGCTTTCCA+AGG | - | chr4_1:45155920-45155939 | Msa0549900:intron | 50.0% | |
| GTTCCTCGTTGAAAACGGCT+TGG | + | chr4_1:45155959-45155978 | None:intergenic | 50.0% | |
| ! | CTCTTTTATCCGTCACACCC+TGG | - | chr4_1:45155978-45155997 | Msa0549900:intron | 50.0% |
| CCTTCATAACCAGGGTGTGA+CGG | + | chr4_1:45155990-45156009 | None:intergenic | 50.0% | |
| CGTCACACCCTGGTTATGAA+GGG | - | chr4_1:45155988-45156007 | Msa0549900:intron | 50.0% | |
| GCATGAAGCCCTTCATAACC+AGG | + | chr4_1:45155999-45156018 | None:intergenic | 50.0% | |
| GCTCTCAAACCTTTCCCTGA+TGG | - | chr4_1:45156197-45156216 | Msa0549900:intron | 50.0% | |
| CAATCTGAGCCATCAGGGAA+AGG | + | chr4_1:45156209-45156228 | None:intergenic | 50.0% | |
| CTTTCCCTGATGGCTCAGAT+TGG | - | chr4_1:45156207-45156226 | Msa0549900:CDS | 50.0% | |
| GGTTACCAATCTGAGCCATC+AGG | + | chr4_1:45156215-45156234 | None:intergenic | 50.0% | |
| AAGTGGGTAGGTCACTCGAG+CGG | - | chr4_1:45154548-45154567 | Msa0549900:CDS | 55.0% | |
| AGCGGGTGGGTATGGTTCAT+AGG | - | chr4_1:45154566-45154585 | Msa0549900:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4_1:45154756-45154775 | Msa0549900:CDS | 55.0% | |
| AGGTGAGGGAGTTGACCGAA+AGG | - | chr4_1:45155211-45155230 | Msa0549900:intron | 55.0% | |
| GGGAGTTGACCGAAAGGCTT+CGG | - | chr4_1:45155217-45155236 | Msa0549900:intron | 55.0% | |
| CTCTGCAAGCCGAAGCCTTT+CGG | + | chr4_1:45155229-45155248 | None:intergenic | 55.0% | |
| TGCAGAGCAAGGGAAAGACC+AGG | - | chr4_1:45155242-45155261 | Msa0549900:intron | 55.0% | |
| TGTCTTCGACGAACCTGCGA+TGG | - | chr4_1:45155800-45155819 | Msa0549900:intron | 55.0% | |
| GTCTTCGACGAACCTGCGAT+GGG | - | chr4_1:45155801-45155820 | Msa0549900:intron | 55.0% | |
| AGCAACACGGCTTTCCAAGG+AGG | - | chr4_1:45155923-45155942 | Msa0549900:intron | 55.0% | |
| GCTTTCCAAGGAGGTCGCAT+GGG | - | chr4_1:45155932-45155951 | Msa0549900:intron | 55.0% | |
| !! | GGACCAAGCCGTTTTCAACG+AGG | - | chr4_1:45155953-45155972 | Msa0549900:intron | 55.0% |
| CCGTCACACCCTGGTTATGA+AGG | - | chr4_1:45155987-45156006 | Msa0549900:intron | 55.0% | |
| TTCGCGGAAGCTTATCAGGG+TGG | + | chr4_1:45156136-45156155 | None:intergenic | 55.0% | |
| AGTGGGTAGGTCACTCGAGC+GGG | - | chr4_1:45154549-45154568 | Msa0549900:CDS | 60.0% | |
| ! | AGGCTTCGGCTTGCAGAGCA+AGG | - | chr4_1:45155231-45155250 | Msa0549900:intron | 60.0% |
| ! | GGCTTCGGCTTGCAGAGCAA+GGG | - | chr4_1:45155232-45155251 | Msa0549900:intron | 60.0% |
| GGAGGGAACCATGCTGTCTC+CGG | - | chr4_1:45155609-45155628 | Msa0549900:intron | 60.0% | |
| GAGGGAACCATGCTGTCTCC+GGG | - | chr4_1:45155610-45155629 | Msa0549900:intron | 60.0% | |
| TCGACGAACCTGCGATGGGT+TGG | - | chr4_1:45155805-45155824 | Msa0549900:intron | 60.0% | |
| ! | CGACGAACCTGCGATGGGTT+GGG | - | chr4_1:45155806-45155825 | Msa0549900:intron | 60.0% |
| TATCGAGCCCAACCCATCGC+AGG | + | chr4_1:45155816-45155835 | None:intergenic | 60.0% | |
| GGCTTTCCAAGGAGGTCGCA+TGG | - | chr4_1:45155931-45155950 | Msa0549900:intron | 60.0% | |
| TTGGTCCCATGCGACCTCCT+TGG | + | chr4_1:45155940-45155959 | None:intergenic | 60.0% | |
| GGTAGGTCACTCGAGCGGGT+GGG | - | chr4_1:45154553-45154572 | Msa0549900:CDS | 65.0% | |
| GTCACTCGAGCGGGTGGGTA+TGG | - | chr4_1:45154558-45154577 | Msa0549900:CDS | 65.0% | |
| GGGTAGGTCACTCGAGCGGG+TGG | - | chr4_1:45154552-45154571 | Msa0549900:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 45153513 | 45156505 | 45153513 | ID=Msa0549900;Name=Msa0549900 |
| chr4_1 | mRNA | 45153513 | 45156505 | 45153513 | ID=Msa0549900-mRNA-1;Parent=Msa0549900;Name=Msa0549900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=106|0|0.66|0.66|1|1|3|273|462 |
| chr4_1 | exon | 45153513 | 45154901 | 45153513 | ID=Msa0549900-mRNA-1:exon:11837;Parent=Msa0549900-mRNA-1 |
| chr4_1 | exon | 45155305 | 45155379 | 45155305 | ID=Msa0549900-mRNA-1:exon:11836;Parent=Msa0549900-mRNA-1 |
| chr4_1 | exon | 45156202 | 45156505 | 45156202 | ID=Msa0549900-mRNA-1:exon:11835;Parent=Msa0549900-mRNA-1 |
| chr4_1 | five_prime_UTR | 45156400 | 45156505 | 45156400 | ID=Msa0549900-mRNA-1:five_prime_utr;Parent=Msa0549900-mRNA-1 |
| chr4_1 | CDS | 45156202 | 45156399 | 45156202 | ID=Msa0549900-mRNA-1:cds;Parent=Msa0549900-mRNA-1 |
| chr4_1 | CDS | 45155305 | 45155379 | 45155305 | ID=Msa0549900-mRNA-1:cds;Parent=Msa0549900-mRNA-1 |
| chr4_1 | CDS | 45153786 | 45154901 | 45153786 | ID=Msa0549900-mRNA-1:cds;Parent=Msa0549900-mRNA-1 |
| chr4_1 | three_prime_UTR | 45153513 | 45153785 | 45153513 | ID=Msa0549900-mRNA-1:three_prime_utr;Parent=Msa0549900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
