AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0661480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661480 MtrunA17_Chr3g0144221 94.953 634 14 2 1 633 1 617 0.0 1226
Msa0661480 MtrunA17_Chr1g0199651 52.183 481 210 3 4 483 8 469 1.16e-167 487
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661480 AT1G76400.1 66.502 609 186 2 25 633 24 614 0.0 833
Msa0661480 AT1G76400.2 65.996 547 168 2 25 571 24 552 0.0 741
Msa0661480 AT2G01720.1 51.158 475 205 5 14 482 10 463 3.62e-161 470

Find 161 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGACTTCTGCATCTTATT+TGG 0.144569 4_3:-72995441 Msa0661480:CDS
CATCGTTGCGTGATCTTTCT+AGG 0.176304 4_3:-72995245 Msa0661480:CDS
CTGGAAATGGTTGCAATATA+TGG 0.199405 4_3:+72999613 None:intergenic
ACTGTCTAGAAGTATGTTTC+TGG 0.210627 4_3:+72994515 None:intergenic
CGCTTCCTTAATATCTCTTT+TGG 0.225268 4_3:-72998812 Msa0661480:CDS
GAGCCGTTAATGTTGATTTC+TGG 0.228415 4_3:-72995521 Msa0661480:CDS
CAAGTAAAACAAGGTCAAAA+TGG 0.248950 4_3:+72994756 None:intergenic
GTCAATCACCAAATCATTAA+TGG 0.250801 4_3:+72998784 None:intergenic
CCACTTCAGGACTTCTTGTT+TGG 0.252717 4_3:-72998848 Msa0661480:CDS
ACAAGAGATTTATGATCTTA+TGG 0.256694 4_3:-72994834 Msa0661480:CDS
TCGCCCTTCCCAAGGCCTTT+AGG 0.289486 4_3:+72999669 None:intergenic
TACTCTTGCGCCTGTATTGC+AGG 0.289724 4_3:-72995579 Msa0661480:CDS
AAGGAAGAGGGAATATCTTT+AGG 0.294373 4_3:+72999714 None:intergenic
TGTCTTTCTTTCACAGGAAA+TGG 0.294905 4_3:+72998384 None:intergenic
CTGCTGCAGACTTGACTATC+AGG 0.298525 4_3:-72999165 Msa0661480:intron
AAGTGCTTTACATGGTTATC+AGG 0.308889 4_3:+72999822 None:intergenic
TGGATATGGGTTGCCACTTC+AGG 0.311465 4_3:-72998861 Msa0661480:CDS
GCTGGAAAATACAAAACTTC+AGG 0.319386 4_3:-72999460 Msa0661480:CDS
GGGAACCAAAAGAGATATTA+AGG 0.322733 4_3:+72998807 None:intergenic
TGCTAAGGAGAGAGATTTGC+AGG 0.327633 4_3:-72994969 Msa0661480:CDS
TCAATCACCAAATCATTAAT+GGG 0.328904 4_3:+72998785 None:intergenic
TTTAGGGCGGACAACTTCAT+AGG 0.340630 4_3:+72999731 None:intergenic
TGCAAATCTGCTGCAATTAC+CGG 0.340964 4_3:-73000807 Msa0661480:five_prime_UTR
AGGGCTGATTATTCTCAAAA+TGG 0.345796 4_3:+72999373 None:intergenic
CATATATATACACTAGAATA+AGG 0.350488 4_3:-72994618 Msa0661480:three_prime_UTR
TATTTCCACTTCTAGTTTGT+GGG 0.353054 4_3:-72999045 Msa0661480:CDS
GATTGTTATGAGAAGAAGTT+AGG 0.359037 4_3:-72994914 Msa0661480:CDS
ATATTTCCACTTCTAGTTTG+TGG 0.370550 4_3:-72999046 Msa0661480:CDS
GAGCATTATAATCTTGTTCA+TGG 0.371780 4_3:-72999285 Msa0661480:CDS
TTCTCAAAATGGATAACAAT+TGG 0.382836 4_3:+72999384 None:intergenic
CAGGGTGGTTTGACTTTAGT+AGG 0.384720 4_3:-72995611 Msa0661480:CDS
GTAACTTTACCTAAAGGCCT+TGG 0.391130 4_3:-72999678 Msa0661480:CDS
CAGGGATCTGAATTGAAATA+TGG 0.392730 4_3:-72999441 Msa0661480:CDS
CTGGTTCAGTGAGAGCGTTT+TGG 0.397574 4_3:-73000779 Msa0661480:five_prime_UTR
AGATTTGCAGGAGAAGCTTA+TGG 0.399523 4_3:-72994957 Msa0661480:CDS
TAAGAGGTGCATCTGCCTTT+AGG 0.408931 4_3:-72999130 Msa0661480:CDS
AGGAAGAGGGAATATCTTTA+GGG 0.416520 4_3:+72999715 None:intergenic
GGAAAGGCGAAATCATCTTC+TGG 0.418481 4_3:-72999765 Msa0661480:CDS
GAGCTCATTCTGTTTACTAC+AGG 0.418845 4_3:-72999082 Msa0661480:CDS
ATTTATTAAATTTATTGAAA+GGG 0.424505 4_3:-73000886 None:intergenic
GATTGGACCTTCACGGGATA+AGG 0.432111 4_3:+72999528 None:intergenic
GAGGAAGGGAAATTGAAAAT+CGG 0.432426 4_3:-72994892 Msa0661480:CDS
ATGAGAAGAAGTTAGGAGGA+AGG 0.433364 4_3:-72994907 Msa0661480:CDS
AAGCCAGAAATCAACATTAA+CGG 0.434432 4_3:+72995518 None:intergenic
GGATGAGATCGGAGAGGACC+TGG 0.435073 4_3:+73000653 None:intergenic
AATTTATTAAATTTATTGAA+AGG 0.438737 4_3:-73000887 None:intergenic
CCGCACCACTACCACTCTTA+AGG 0.447901 4_3:-73000439 Msa0661480:intron
GTAATTTAACATTGAGCGAT+TGG 0.448219 4_3:+72999511 None:intergenic
ACCTCATGTCTTTCTTTCAC+AGG 0.448961 4_3:+72998378 None:intergenic
GACTTCTTGTTTGGAGTCGA+TGG 0.451851 4_3:-72998839 Msa0661480:CDS
TAACTTTACCTAAAGGCCTT+GGG 0.455605 4_3:-72999677 Msa0661480:CDS
TTATAATAGACCTGCAATAC+AGG 0.458777 4_3:+72995569 None:intergenic
GGTTCAAGCAACTATTCATC+AGG 0.459505 4_3:-72995316 Msa0661480:CDS
GTTTACTACAGGGATGAAAT+CGG 0.459929 4_3:-72999071 Msa0661480:CDS
TATTCTGTAACTTTACCTAA+AGG 0.460646 4_3:-72999684 Msa0661480:CDS
TTCTTCTCTAGCACGACAAC+AGG 0.460738 4_3:+72998227 None:intergenic
TCAACCGTCTTTCTATGCTC+AGG 0.463333 4_3:-72995544 Msa0661480:CDS
GGAGATTGAGATATCCCATT+GGG 0.465275 4_3:-72999325 Msa0661480:CDS
AGCAACGACTAATGATACTA+TGG 0.470319 4_3:+72995292 None:intergenic
TAAAGATATTCCCTCTTCCT+TGG 0.470995 4_3:-72999712 Msa0661480:CDS
TCTAGGACAGGTGATATTCA+AGG 0.471596 4_3:-72995228 Msa0661480:CDS
TGGAAATGGTTGCAATATAT+GGG 0.474469 4_3:+72999614 None:intergenic
TGAGAAGAAGTTAGGAGGAA+GGG 0.475108 4_3:-72994906 Msa0661480:CDS
CTGGAAAATACAAAACTTCA+GGG 0.476503 4_3:-72999459 Msa0661480:CDS
AAGTAAAACAAGGTCAAAAT+GGG 0.479563 4_3:+72994757 None:intergenic
AATGGAGGAAGATTCTCATA+TGG 0.481992 4_3:+72999417 None:intergenic
GCGAAATCATCTTCTGGTGT+TGG 0.483362 4_3:-72999759 Msa0661480:CDS
GCAGATGCACCTCTTACATA+TGG 0.485700 4_3:+72999137 None:intergenic
GCTGCAATTACCGGGATCTC+TGG 0.488390 4_3:-73000798 Msa0661480:five_prime_UTR
GGTAATATTTGAGCGGCTTG+TGG 0.494892 4_3:+72995117 None:intergenic
ACTTACACGACGGTCAACTT+TGG 0.499801 4_3:+73000627 None:intergenic
CTTATTTGGCAAAGATCCAA+TGG 0.502030 4_3:-72995427 Msa0661480:CDS
CTTGGCAGTAAGACGCCTAA+AGG 0.502523 4_3:+72999115 None:intergenic
TTGCGTGATCTTTCTAGGAC+AGG 0.503122 4_3:-72995240 Msa0661480:CDS
CAAATAAGATGCAGAAGTCT+TGG 0.505500 4_3:+72995442 None:intergenic
GAGCACCTTAAGAGTGGTAG+TGG 0.506326 4_3:+73000434 None:intergenic
ATTGAGCGATTGGACCTTCA+CGG 0.508824 4_3:+72999521 None:intergenic
AGTTGATTACCTCTTCCCAT+TGG 0.512116 4_3:+72995411 None:intergenic
AATAGAGTCCTACACAAAGC+TGG 0.512238 4_3:-72999478 Msa0661480:CDS
AGAATAAGTTGCCAAGGAAG+AGG 0.516063 4_3:+72999701 None:intergenic
TGCACCTCTTACATATGGCC+TGG 0.517740 4_3:+72999142 None:intergenic
TTGAGCGATTGGACCTTCAC+GGG 0.522891 4_3:+72999522 None:intergenic
TAGGACTCTATTCTTGCCTC+AGG 0.522970 4_3:+72999489 None:intergenic
GAGGACCTGGGAGGATAGAA+TGG 0.523253 4_3:+73000666 None:intergenic
CAAAATGGATAACAATTGGC+AGG 0.524969 4_3:+72999388 None:intergenic
ATGAGCTCTTGGTGGCAGCT+TGG 0.525565 4_3:+72999097 None:intergenic
GAATAAGTTGCCAAGGAAGA+GGG 0.531898 4_3:+72999702 None:intergenic
TTCACAGGAAATGGAACAGA+TGG 0.535738 4_3:+72998393 None:intergenic
TAGTAAACAGAATGAGCTCT+TGG 0.535990 4_3:+72999086 None:intergenic
CTTTCAGGTTGTCTTGCCAG+AGG 0.536714 4_3:-72998433 Msa0661480:intron
ACAATTGGCAGGTATGAGAA+TGG 0.537574 4_3:+72999399 None:intergenic
TTTCAGGTTGTCTTGCCAGA+GGG 0.540711 4_3:-72998432 Msa0661480:intron
AACTCTTTAGCAACGGCGAA+GGG 0.542494 4_3:+72999354 None:intergenic
TGATCTGTACATTGCCCCAA+TGG 0.542650 4_3:+72999310 None:intergenic
TGAAAATGCTCATTATGCTC+AGG 0.547728 4_3:+72998194 None:intergenic
TGTTATGAGAAGAAGTTAGG+AGG 0.549117 4_3:-72994911 Msa0661480:CDS
CAGGCCAGGCCATATGTAAG+AGG 0.549205 4_3:-72999146 Msa0661480:CDS
CACGACGGTCAACTTTGGTA+AGG 0.549384 4_3:+73000632 None:intergenic
CTAGGACAGGTGATATTCAA+GGG 0.554420 4_3:-72995227 Msa0661480:CDS
CTTCGCCGTTGCTAAAGAGT+TGG 0.554612 4_3:-72999352 Msa0661480:CDS
TATTGAAAGGGTGCAAAGCA+TGG 0.554839 4_3:-73000874 Msa0661480:five_prime_UTR
CAACCGTCTTTCTATGCTCA+GGG 0.556453 4_3:-72995543 Msa0661480:CDS
TTACCTAAAGGCCTTGGGAA+GGG 0.556651 4_3:-72999672 Msa0661480:CDS
GCAAATCTGCTGCAATTACC+GGG 0.557395 4_3:-73000806 Msa0661480:five_prime_UTR
TCAAACTTTCGCCCTTCCCA+AGG 0.557699 4_3:+72999661 None:intergenic
GTCACCCCACAAACTAGAAG+TGG 0.557838 4_3:+72999040 None:intergenic
TTATTTGGCAAAGATCCAAT+GGG 0.565258 4_3:-72995426 Msa0661480:CDS
CTTTACATGGTTATCAGGAA+AGG 0.566975 4_3:+72999827 None:intergenic
AGCAACACTTAACGAAGGAA+AGG 0.568080 4_3:-72999787 Msa0661480:CDS
TGTATGCTAAGTGCTTTACA+TGG 0.568391 4_3:+72999814 None:intergenic
ATTTCCACTTCTAGTTTGTG+GGG 0.568670 4_3:-72999044 Msa0661480:CDS
GGCAAAGATCCAATGGGAAG+AGG 0.571287 4_3:-72995420 Msa0661480:intron
TTAGGGCGGACAACTTCATA+GGG 0.576553 4_3:+72999732 None:intergenic
GCAGACTTGACTATCAGGCC+AGG 0.579305 4_3:-72999160 Msa0661480:intron
GCAACACTTAACGAAGGAAA+GGG 0.580045 4_3:-72999786 Msa0661480:CDS
GAAGGGCGAAAGTTTGACGT+TGG 0.580960 4_3:-72999655 Msa0661480:CDS
GTGTCGCAGGTAGAGAATGC+AGG 0.581081 4_3:-72999879 Msa0661480:intron
TCTTTCTCCTTATCCCGTGA+AGG 0.581200 4_3:-72999535 Msa0661480:CDS
TTTACCTAAAGGCCTTGGGA+AGG 0.581516 4_3:-72999673 Msa0661480:CDS
CAATCACCAAATCATTAATG+GGG 0.584647 4_3:+72998786 None:intergenic
GACCTTGGGTAATATTTGAG+CGG 0.585756 4_3:+72995110 None:intergenic
AGTTACAGAATAAGTTGCCA+AGG 0.586321 4_3:+72999695 None:intergenic
TAAACAGAATGAGCTCTTGG+TGG 0.587661 4_3:+72999089 None:intergenic
CCAAACAAGAAGTCCTGAAG+TGG 0.588215 4_3:+72998848 None:intergenic
ATTTACCATTCTATCCTCCC+AGG 0.591306 4_3:-73000671 Msa0661480:CDS
TCTCACTGAACCAGAGATCC+CGG 0.591331 4_3:+73000788 None:intergenic
AACTTTGAGCACCTTAAGAG+TGG 0.594308 4_3:+73000428 None:intergenic
CCGTTGCTAAAGAGTTGGTG+AGG 0.595956 4_3:-72999347 Msa0661480:CDS
CAACTCTTTAGCAACGGCGA+AGG 0.602379 4_3:+72999353 None:intergenic
AACTTTGGTAAGGATGAGAT+CGG 0.602673 4_3:+73000642 None:intergenic
CATGGCGGTGCTCAGAGCAA+AGG 0.603405 4_3:-72999267 Msa0661480:CDS
GATGAGATCGGAGAGGACCT+GGG 0.604322 4_3:+73000654 None:intergenic
AGCTCATTCTGTTTACTACA+GGG 0.610364 4_3:-72999081 Msa0661480:CDS
GTCTGCATGCATGTAGACAA+TGG 0.610818 4_3:+72995475 None:intergenic
AACATTCGAACAAGAAACAA+AGG 0.611122 4_3:-73000850 Msa0661480:five_prime_UTR
GATTGACACTCTTGTTGTGA+AGG 0.615337 4_3:-72998768 Msa0661480:intron
GGTGGAGGAAGTAATTGCTA+AGG 0.617368 4_3:-72994984 Msa0661480:CDS
GATCTGTACATTGCCCCAAT+GGG 0.625357 4_3:+72999311 None:intergenic
ATTTCATGATGACGATGATG+AGG 0.626481 4_3:-73000723 Msa0661480:exon
AAGTGGCAACCCATATCCAA+TGG 0.630677 4_3:+72998865 None:intergenic
GGGAGATTGAGATATCCCAT+TGG 0.633387 4_3:-72999326 Msa0661480:CDS
AGCCGCTCAAATATTACCCA+AGG 0.639940 4_3:-72995112 Msa0661480:intron
CGTTGCTAAAGAGTTGGTGA+GGG 0.643300 4_3:-72999346 Msa0661480:CDS
ACTTAACGAAGGAAAGGGAA+AGG 0.652066 4_3:-72999781 Msa0661480:CDS
TCCTGTGAAAGAAAGACATG+AGG 0.667785 4_3:-72998379 Msa0661480:intron
GCTCCCTGAGCATAGAAAGA+CGG 0.670119 4_3:+72995540 None:intergenic
GCTCAATGTTAAATTACCTG+AGG 0.670175 4_3:-72999505 Msa0661480:CDS
AATCACCAAATCATTAATGG+GGG 0.672170 4_3:+72998787 None:intergenic
CCTCACCAACTCTTTAGCAA+CGG 0.676013 4_3:+72999347 None:intergenic
CCTTAAGAGTGGTAGTGGTG+CGG 0.677361 4_3:+73000439 None:intergenic
GAACTAAATCAAGTAAAACA+AGG 0.678884 4_3:+72994747 None:intergenic
ATTGGCAGGTATGAGAATGG+AGG 0.680768 4_3:+72999402 None:intergenic
AAGAGGGAATATCTTTAGGG+CGG 0.682262 4_3:+72999718 None:intergenic
ATGTCAGCAACACTTAACGA+AGG 0.697211 4_3:-72999792 Msa0661480:CDS
CTCGTTGAAAGAGCTCACAA+AGG 0.716021 4_3:-72995175 Msa0661480:CDS
CATTATAATCTTGTTCATGG+CGG 0.724346 4_3:-72999282 Msa0661480:CDS
CAGAACTTGAGATCGAACCT+CGG 0.724721 4_3:-72998922 Msa0661480:CDS
GAGATTGAGATATCCCATTG+GGG 0.726808 4_3:-72999324 Msa0661480:CDS
TGGTAAGGATGAGATCGGAG+AGG 0.732813 4_3:+73000647 None:intergenic
GAGATCGGAGAGGACCTGGG+AGG 0.742940 4_3:+73000657 None:intergenic
TGCATGCATGTAGACAATGG+AGG 0.747749 4_3:+72995478 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTGTG+TGG - chr4_3:72994980-72994999 Msa0661480:CDS 10.0%
!!! TTTTTTTTTTTTTTTTGTGT+GGG - chr4_3:72994981-72995000 Msa0661480:CDS 10.0%
!!! AAAAATTCATTTTATATTGT+TGG + chr4_3:72997259-72997278 None:intergenic 10.0%
!!! AAATTATTTTCCATTTTTTA+TGG + chr4_3:72998437-72998456 None:intergenic 10.0%
!!! TTATTTTATTTTTGTTTTTC+AGG - chr4_3:73000363-73000382 Msa0661480:intron 10.0%
!!! AAAGTTAAATTACAAAGTTT+TGG + chr4_3:72995031-72995050 None:intergenic 15.0%
!! AAGAATAATAAATGTTGTAT+TGG - chr4_3:72997498-72997517 Msa0661480:intron 15.0%
!!! AAATAATTTGAAATTTTTGC+TGG - chr4_3:72998448-72998467 Msa0661480:intron 15.0%
!!! ATATGATATTTGAAGTATTT+TGG + chr4_3:72998052-72998071 None:intergenic 15.0%
!!! TTCAAGATACTTTTTTTTTT+TGG - chr4_3:72998762-72998781 Msa0661480:intron 15.0%
!!! ACAATTAGGTTATTTTATAT+CGG + chr4_3:72999589-72999608 None:intergenic 15.0%
!!! TTTTTTTTGTACAAACAATT+AGG + chr4_3:72999603-72999622 None:intergenic 15.0%
!! AGAATTGAAAAATCTTAGAT+CGG + chr4_3:72994809-72994828 None:intergenic 20.0%
!!! TGAACTTTAGTTTAAAAACT+TGG - chr4_3:72995285-72995304 Msa0661480:CDS 20.0%
!! AAGAAAGTAAAATTATGTGT+TGG + chr4_3:72996648-72996667 None:intergenic 20.0%
!!! AATTCATTTTATATTGTTGG+TGG + chr4_3:72997256-72997275 None:intergenic 20.0%
!! TCTTAAAAATAAGATGTTTG+TGG + chr4_3:72997295-72997314 None:intergenic 20.0%
!! CCACTAACTATAATTAATAA+GGG + chr4_3:72997431-72997450 None:intergenic 20.0%
!! TCCACTAACTATAATTAATA+AGG + chr4_3:72997432-72997451 None:intergenic 20.0%
!! TGATTGAAATGCAATAAATA+AGG - chr4_3:72997461-72997480 Msa0661480:intron 20.0%
!! GATTGAAATGCAATAAATAA+GGG - chr4_3:72997462-72997481 Msa0661480:intron 20.0%
!!! AATAAATAAGGGTATGTTAA+TGG - chr4_3:72997473-72997492 Msa0661480:intron 20.0%
!!! TACTGGTTTTATTATTGAAT+TGG - chr4_3:72997647-72997666 Msa0661480:intron 20.0%
!!! ACTGGTTTTATTATTGAATT+GGG - chr4_3:72997648-72997667 Msa0661480:intron 20.0%
!! AGCTTGAAAATAGTTTATAA+TGG - chr4_3:72997749-72997768 Msa0661480:intron 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG + chr4_3:72998134-72998153 None:intergenic 20.0%
!! CAAAACTATTGAATACAAAA+TGG - chr4_3:72998304-72998323 Msa0661480:intron 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG + chr4_3:72998134-72998153 None:intergenic 20.0%
!! TTGTAACATTCCAATTAAAT+TGG + chr4_3:72999155-72999174 None:intergenic 20.0%
!!! AAAAACCCTTTTTTTTACAT+GGG + chr4_3:72999257-72999276 None:intergenic 20.0%
!!! AAAAAACCCTTTTTTTTACA+TGG + chr4_3:72999258-72999277 None:intergenic 20.0%
!!! CAATTAGGTTATTTTATATC+GGG + chr4_3:72999588-72999607 None:intergenic 20.0%
!!! CTTTTAAAATGTGAACAATT+AGG + chr4_3:72999629-72999648 None:intergenic 20.0%
!!! ATTTGATTACTTTTTGTACA+GGG - chr4_3:72999739-72999758 Msa0661480:CDS 20.0%
!!! TTTTATTTTTGTTTTTCAGG+TGG - chr4_3:73000366-73000385 Msa0661480:intron 20.0%
!!! TTTAGTTCAGAAATTTTTAG+CGG - chr4_3:73000636-73000655 Msa0661480:CDS 20.0%
!! CATATATATACACTAGAATA+AGG - chr4_3:73000750-73000769 Msa0661480:five_prime_UTR 20.0%
!! AAGTCTTCATTTCATCTTTT+AGG - chr4_3:72994760-72994779 Msa0661480:three_prime_UTR 25.0%
!! AGTCTTCATTTCATCTTTTA+GGG - chr4_3:72994761-72994780 Msa0661480:three_prime_UTR 25.0%
! TAATTAGTATTTATCGATGC+TGG - chr4_3:72994828-72994847 Msa0661480:CDS 25.0%
!!! TTTTTTTTTTTTTGTGTGGG+TGG - chr4_3:72994984-72995003 Msa0661480:CDS 25.0%
!!! TTTTTTTTTTTTGTGTGGGT+GGG - chr4_3:72994985-72995004 Msa0661480:CDS 25.0%
!! TGTCATTGTATTTTATCATG+TGG + chr4_3:72995221-72995240 None:intergenic 25.0%
! ACATGATAAAATACAATGAC+AGG - chr4_3:72995220-72995239 Msa0661480:CDS 25.0%
! CATGATAAAATACAATGACA+GGG - chr4_3:72995221-72995240 Msa0661480:CDS 25.0%
! TATTCTGTAACTTTACCTAA+AGG - chr4_3:72995684-72995703 Msa0661480:intron 25.0%
! TTCTCAAAATGGATAACAAT+TGG + chr4_3:72995987-72996006 None:intergenic 25.0%
! TCAATCACCAAATCATTAAT+GGG + chr4_3:72996586-72996605 None:intergenic 25.0%
!!! TCATTATTTTGTTGCAAACT+TGG - chr4_3:72996676-72996695 Msa0661480:intron 25.0%
!!! TTTACCTGTATATTTTTCAG+AGG - chr4_3:72996747-72996766 Msa0661480:intron 25.0%
! ACATAGATATCTATCATCTA+TGG + chr4_3:72997042-72997061 None:intergenic 25.0%
!!! TATTACTGTTGCATCTTTTT+TGG - chr4_3:72997199-72997218 Msa0661480:intron 25.0%
! CCCTTATTAATTATAGTTAG+TGG - chr4_3:72997428-72997447 Msa0661480:intron 25.0%
!! TGTTGTATTGGTATTGTAAA+AGG - chr4_3:72997510-72997529 Msa0661480:intron 25.0%
!! GTTGTATTGGTATTGTAAAA+GGG - chr4_3:72997511-72997530 Msa0661480:intron 25.0%
!! TTTGCAGTTTTCTTTTCTAT+TGG - chr4_3:72997693-72997712 Msa0661480:intron 25.0%
!! CTCTTTTCATTATGAAACTT+AGG + chr4_3:72997725-72997744 None:intergenic 25.0%
!!! CCAGATTAGATTTTTTACAT+TGG + chr4_3:72997818-72997837 None:intergenic 25.0%
! CCAATGTAAAAAATCTAATC+TGG - chr4_3:72997815-72997834 Msa0661480:intron 25.0%
! TTGTAACCTACCATTTAATT+TGG + chr4_3:72998282-72998301 None:intergenic 25.0%
! TTGTAGGATACTAGATTTAT+TGG - chr4_3:72998521-72998540 Msa0661480:intron 25.0%
! TGTAGGATACTAGATTTATT+GGG - chr4_3:72998522-72998541 Msa0661480:intron 25.0%
! ACATTGCATTATTATATGCA+GGG + chr4_3:72998859-72998878 None:intergenic 25.0%
! AAACATAACTCCAAATTCTA+AGG - chr4_3:72998985-72999004 Msa0661480:intron 25.0%
! AACATAACTCCAAATTCTAA+GGG - chr4_3:72998986-72999005 Msa0661480:intron 25.0%
! GTAAGATACTAGATTGAATT+GGG - chr4_3:72999337-72999356 Msa0661480:CDS 25.0%
!! GCTCTTTATAAACTATTTTC+AGG + chr4_3:72999520-72999539 None:intergenic 25.0%
!!! GATTTGATTACTTTTTGTAC+AGG - chr4_3:72999738-72999757 Msa0661480:CDS 25.0%
! TCTTTACTTGCAAATGATTA+TGG - chr4_3:72999996-73000015 Msa0661480:intron 25.0%
! TATGGAACTATAAATCAAGA+GGG + chr4_3:73000342-73000361 None:intergenic 25.0%
! TTATGGAACTATAAATCAAG+AGG + chr4_3:73000343-73000362 None:intergenic 25.0%
! ACAAGAGATTTATGATCTTA+TGG - chr4_3:73000534-73000553 Msa0661480:intron 25.0%
! AAGTAAAACAAGGTCAAAAT+GGG + chr4_3:73000614-73000633 None:intergenic 25.0%
! GAACTAAATCAAGTAAAACA+AGG + chr4_3:73000624-73000643 None:intergenic 25.0%
!!! CAAAGTTTTTAAGAAATGAG+GGG + chr4_3:73000826-73000845 None:intergenic 25.0%
!!! GCAAAGTTTTTAAGAAATGA+GGG + chr4_3:73000827-73000846 None:intergenic 25.0%
!!! AGCAAAGTTTTTAAGAAATG+AGG + chr4_3:73000828-73000847 None:intergenic 25.0%
AACATTCGAACAAGAAACAA+AGG - chr4_3:72994518-72994537 Msa0661480:three_prime_UTR 30.0%
AGATCAATCTGCAAACAATA+GGG + chr4_3:72994894-72994913 None:intergenic 30.0%
GCATCAAAGGAAATAAGATA+AGG + chr4_3:72995433-72995452 None:intergenic 30.0%
TGGAAATGGTTGCAATATAT+GGG + chr4_3:72995757-72995776 None:intergenic 30.0%
GTAATTTAACATTGAGCGAT+TGG + chr4_3:72995860-72995879 None:intergenic 30.0%
CTGGAAAATACAAAACTTCA+GGG - chr4_3:72995909-72995928 Msa0661480:intron 30.0%
GAGCATTATAATCTTGTTCA+TGG - chr4_3:72996083-72996102 Msa0661480:intron 30.0%
CATTATAATCTTGTTCATGG+CGG - chr4_3:72996086-72996105 Msa0661480:intron 30.0%
AATTCAGAATCACAGAAACA+AGG + chr4_3:72996143-72996162 None:intergenic 30.0%
!! ATATTTCCACTTCTAGTTTG+TGG - chr4_3:72996322-72996341 Msa0661480:intron 30.0%
!! TATTTCCACTTCTAGTTTGT+GGG - chr4_3:72996323-72996342 Msa0661480:intron 30.0%
AATCACCAAATCATTAATGG+GGG + chr4_3:72996584-72996603 None:intergenic 30.0%
CAATCACCAAATCATTAATG+GGG + chr4_3:72996585-72996604 None:intergenic 30.0%
GTCAATCACCAAATCATTAA+TGG + chr4_3:72996587-72996606 None:intergenic 30.0%
! AGTTCCTCTGAAAAATATAC+AGG + chr4_3:72996754-72996773 None:intergenic 30.0%
!!! TTTTTCCTGCTTTTTGTCAT+TGG - chr4_3:72996850-72996869 Msa0661480:intron 30.0%
GTCATTGTAGTATATTGTGT+AGG - chr4_3:72996878-72996897 Msa0661480:intron 30.0%
AGATATCTATCATCTATGGT+TGG + chr4_3:72997038-72997057 None:intergenic 30.0%
ATCTATGTCATTCCATTGTT+TGG - chr4_3:72997054-72997073 Msa0661480:intron 30.0%
TCTATGTCATTCCATTGTTT+GGG - chr4_3:72997055-72997074 Msa0661480:intron 30.0%
CTTTGTCTGCAACAATTATA+TGG + chr4_3:72997094-72997113 None:intergenic 30.0%
ATATCCTGAATTTCATGTAC+TGG - chr4_3:72997630-72997649 Msa0661480:intron 30.0%
AAAACCAGTACATGAAATTC+AGG + chr4_3:72997637-72997656 None:intergenic 30.0%
TGAAAGTTGAAAATAAGCCT+AGG + chr4_3:72997912-72997931 None:intergenic 30.0%
TTGTAACCAACCAGTTAATT+TGG + chr4_3:72998247-72998266 None:intergenic 30.0%
CAAAACAGCTCCAAATTAAA+TGG - chr4_3:72998269-72998288 Msa0661480:intron 30.0%
TTCAAATGTCACAGTATTGT+AGG - chr4_3:72998505-72998524 Msa0661480:intron 30.0%
TGATACACGATTCAAAAAAG+TGG + chr4_3:72998662-72998681 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr4_3:72998810-72998829 Msa0661480:CDS 30.0%
CATTGCATTATTATATGCAG+GGG + chr4_3:72998858-72998877 None:intergenic 30.0%
GACATTGCATTATTATATGC+AGG + chr4_3:72998860-72998879 None:intergenic 30.0%
GGGAATAGTTCCAATTTAAT+TGG - chr4_3:72999142-72999161 Msa0661480:CDS 30.0%
GTTGACCCTATAATATTTGA+CGG - chr4_3:72999199-72999218 Msa0661480:intron 30.0%
TTGACCCTATAATATTTGAC+GGG - chr4_3:72999200-72999219 Msa0661480:intron 30.0%
!!! AAAAAAAGGGTTTTTTCTGC+CGG - chr4_3:72999262-72999281 Msa0661480:CDS 30.0%
CGTAAGATACTAGATTGAAT+TGG - chr4_3:72999336-72999355 Msa0661480:CDS 30.0%
TAGATTGAATTGGGATACAT+GGG - chr4_3:72999346-72999365 Msa0661480:CDS 30.0%
TCTAACCTTCATACTTAGAT+GGG + chr4_3:72999680-72999699 None:intergenic 30.0%
ATCTAACCTTCATACTTAGA+TGG + chr4_3:72999681-72999700 None:intergenic 30.0%
TTATAATAGACCTGCAATAC+AGG + chr4_3:72999802-72999821 None:intergenic 30.0%
AAGCCAGAAATCAACATTAA+CGG + chr4_3:72999853-72999872 None:intergenic 30.0%
TTATTTGGCAAAGATCCAAT+GGG - chr4_3:72999942-72999961 Msa0661480:intron 30.0%
!! ACACTTTTGTTTCATCATTC+AGG - chr4_3:73000031-73000050 Msa0661480:intron 30.0%
! AATATTACCCAAGGTCATTT+TGG - chr4_3:73000265-73000284 Msa0661480:intron 30.0%
! ATCAAGAGGGAAATTTTATG+TGG + chr4_3:73000329-73000348 None:intergenic 30.0%
!!! TATTTTTGTTTTTCAGGTGG+AGG - chr4_3:73000369-73000388 Msa0661480:intron 30.0%
GATTGTTATGAGAAGAAGTT+AGG - chr4_3:73000454-73000473 Msa0661480:CDS 30.0%
CAAGTAAAACAAGGTCAAAA+TGG + chr4_3:73000615-73000634 None:intergenic 30.0%
! ATTTCATGATGACGATGATG+AGG - chr4_3:72994645-72994664 Msa0661480:three_prime_UTR 35.0%
AACTTTGGTAAGGATGAGAT+CGG + chr4_3:72994729-72994748 None:intergenic 35.0%
TGAAATGAAGACTTACACGA+CGG + chr4_3:72994754-72994773 None:intergenic 35.0%
TGCAAACAATAGGGAAACAA+TGG + chr4_3:72994885-72994904 None:intergenic 35.0%
CAGATCAATCTGCAAACAAT+AGG + chr4_3:72994895-72994914 None:intergenic 35.0%
AAGTTCTGTAGACAACAACA+TGG + chr4_3:72995177-72995196 None:intergenic 35.0%
TTCATACTTGTGCAAATGAG+AGG - chr4_3:72995341-72995360 Msa0661480:intron 35.0%
GAGCAATTACATTTAGCAAG+TGG + chr4_3:72995402-72995421 None:intergenic 35.0%
AAAGTAAATCGCAGCATCAA+AGG + chr4_3:72995446-72995465 None:intergenic 35.0%
CTTTACATGGTTATCAGGAA+AGG + chr4_3:72995544-72995563 None:intergenic 35.0%
AAGTGCTTTACATGGTTATC+AGG + chr4_3:72995549-72995568 None:intergenic 35.0%
TGTATGCTAAGTGCTTTACA+TGG + chr4_3:72995557-72995576 None:intergenic 35.0%
AGGAAGAGGGAATATCTTTA+GGG + chr4_3:72995656-72995675 None:intergenic 35.0%
AAGGAAGAGGGAATATCTTT+AGG + chr4_3:72995657-72995676 None:intergenic 35.0%
TAAAGATATTCCCTCTTCCT+TGG - chr4_3:72995656-72995675 Msa0661480:intron 35.0%
AGTTACAGAATAAGTTGCCA+AGG + chr4_3:72995676-72995695 None:intergenic 35.0%
TAACTTTACCTAAAGGCCTT+GGG - chr4_3:72995691-72995710 Msa0661480:intron 35.0%
CTGGAAATGGTTGCAATATA+TGG + chr4_3:72995758-72995777 None:intergenic 35.0%
!! TGCGTAATTTTCTCTGGAAA+TGG + chr4_3:72995771-72995790 None:intergenic 35.0%
GCTCAATGTTAAATTACCTG+AGG - chr4_3:72995863-72995882 Msa0661480:intron 35.0%
!! TGTATTTTCCAGCTTTGTGT+AGG + chr4_3:72995901-72995920 None:intergenic 35.0%
GCTGGAAAATACAAAACTTC+AGG - chr4_3:72995908-72995927 Msa0661480:intron 35.0%
CAGGGATCTGAATTGAAATA+TGG - chr4_3:72995927-72995946 Msa0661480:intron 35.0%
AATGGAGGAAGATTCTCATA+TGG + chr4_3:72995954-72995973 None:intergenic 35.0%
CAAAATGGATAACAATTGGC+AGG + chr4_3:72995983-72996002 None:intergenic 35.0%
AGGGCTGATTATTCTCAAAA+TGG + chr4_3:72995998-72996017 None:intergenic 35.0%
TAGTAAACAGAATGAGCTCT+TGG + chr4_3:72996285-72996304 None:intergenic 35.0%
AGCTCATTCTGTTTACTACA+GGG - chr4_3:72996287-72996306 Msa0661480:intron 35.0%
GTTTACTACAGGGATGAAAT+CGG - chr4_3:72996297-72996316 Msa0661480:intron 35.0%
!! ATTTCCACTTCTAGTTTGTG+GGG - chr4_3:72996324-72996343 Msa0661480:intron 35.0%
!! TGGAAAACTGCTTTTACCAT+TGG - chr4_3:72996487-72996506 Msa0661480:intron 35.0%
!! ACTGCTTTTACCATTGGATA+TGG - chr4_3:72996493-72996512 Msa0661480:intron 35.0%
!! CTGCTTTTACCATTGGATAT+GGG - chr4_3:72996494-72996513 Msa0661480:intron 35.0%
! CGCTTCCTTAATATCTCTTT+TGG - chr4_3:72996556-72996575 Msa0661480:intron 35.0%
GGGAACCAAAAGAGATATTA+AGG + chr4_3:72996564-72996583 None:intergenic 35.0%
CAAACTTGGAATGCAATCTT+TGG - chr4_3:72996690-72996709 Msa0661480:intron 35.0%
! AGGAACTAGAAGTATAGTAC+AGG - chr4_3:72996767-72996786 Msa0661480:intron 35.0%
AACAACCAATGACAAAAAGC+AGG + chr4_3:72996858-72996877 None:intergenic 35.0%
TGACTTACTAATACATCTGC+CGG - chr4_3:72996903-72996922 Msa0661480:intron 35.0%
! GAAATATCTTTTGAACCCTC+TGG + chr4_3:72996954-72996973 None:intergenic 35.0%
TGTCTTTCTTTCACAGGAAA+TGG + chr4_3:72996987-72997006 None:intergenic 35.0%
GGACTATAAAACCCAAACAA+TGG + chr4_3:72997069-72997088 None:intergenic 35.0%
GTCTGCAACAATTATATGGA+TGG + chr4_3:72997090-72997109 None:intergenic 35.0%
! TTTTCACACTTGGATATTGC+TGG - chr4_3:72997114-72997133 Msa0661480:intron 35.0%
TGAAAATGCTCATTATGCTC+AGG + chr4_3:72997177-72997196 None:intergenic 35.0%
! TGAGCATAATGAGCATTTTC+AGG - chr4_3:72997176-72997195 Msa0661480:intron 35.0%
!!! TACTGTTGCATCTTTTTTGG+AGG - chr4_3:72997202-72997221 Msa0661480:intron 35.0%
!!! CATTTTATATTGTTGGTGGC+TGG + chr4_3:72997252-72997271 None:intergenic 35.0%
!!! TGTCCCTTTTGAGTTTTACA+CGG - chr4_3:72997342-72997361 Msa0661480:intron 35.0%
TACCCGTGTAAAACTCAAAA+GGG + chr4_3:72997348-72997367 None:intergenic 35.0%
ATACCCGTGTAAAACTCAAA+AGG + chr4_3:72997349-72997368 None:intergenic 35.0%
GTTAGTGTCCTGAATTTGTA+AGG - chr4_3:72997596-72997615 Msa0661480:intron 35.0%
ATTTCCCTCCTTACAAATTC+AGG + chr4_3:72997607-72997626 None:intergenic 35.0%
TGTGATCATGGTAGTCAAAT+TGG - chr4_3:72997960-72997979 Msa0661480:intron 35.0%
GTGATCATGGTAGTCAAATT+GGG - chr4_3:72997961-72997980 Msa0661480:intron 35.0%
ACTCACCTTCTATTCCTTTA+CGG + chr4_3:72998207-72998226 None:intergenic 35.0%
ATAGCTCCAAATTAACTGGT+TGG - chr4_3:72998238-72998257 Msa0661480:CDS 35.0%
ACAGCTCCAAATTAAATGGT+AGG - chr4_3:72998273-72998292 Msa0661480:intron 35.0%
!!! CATTTTTTATGGAACAGTCC+TGG + chr4_3:72998426-72998445 None:intergenic 35.0%
CAGGACTGTTCCATAAAAAA+TGG - chr4_3:72998424-72998443 Msa0661480:CDS 35.0%
ATTTATTGGGATATGCATCG+TGG - chr4_3:72998535-72998554 Msa0661480:intron 35.0%
TTTATTGGGATATGCATCGT+GGG - chr4_3:72998536-72998555 Msa0661480:intron 35.0%
AAAAAGTGGTTGAACGATAC+AGG + chr4_3:72998648-72998667 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG - chr4_3:72998798-72998817 Msa0661480:CDS 35.0%
CACCTTATAAGGTGAATAAG+TGG - chr4_3:72998809-72998828 Msa0661480:CDS 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr4_3:72998811-72998830 Msa0661480:CDS 35.0%
! ACTTCCTCTTTTTCTCTCTA+CGG + chr4_3:72999084-72999103 None:intergenic 35.0%
GTGACCCGTCAAATATTATA+GGG + chr4_3:72999207-72999226 None:intergenic 35.0%
TGTGACCCGTCAAATATTAT+AGG + chr4_3:72999208-72999227 None:intergenic 35.0%
TACCGACCCATGTAAAAAAA+AGG - chr4_3:72999248-72999267 Msa0661480:intron 35.0%
ACCGACCCATGTAAAAAAAA+GGG - chr4_3:72999249-72999268 Msa0661480:intron 35.0%
!!! ACCCTTTTTTTTACATGGGT+CGG + chr4_3:72999253-72999272 None:intergenic 35.0%
CTAGATTGAATTGGGATACA+TGG - chr4_3:72999345-72999364 Msa0661480:CDS 35.0%
TACGATATGAAAACAGCCAT+GGG + chr4_3:72999423-72999442 None:intergenic 35.0%
ATACGATATGAAAACAGCCA+TGG + chr4_3:72999424-72999443 None:intergenic 35.0%
!! TGGCTGTTTTCATATCGTAT+CGG - chr4_3:72999424-72999443 Msa0661480:CDS 35.0%
!!! TGATTACTTTTTGTACAGGG+TGG - chr4_3:72999742-72999761 Msa0661480:CDS 35.0%
CAAATAAGATGCAGAAGTCT+TGG + chr4_3:72999929-72999948 None:intergenic 35.0%
CAAGACTTCTGCATCTTATT+TGG - chr4_3:72999927-72999946 Msa0661480:intron 35.0%
CTTATTTGGCAAAGATCCAA+TGG - chr4_3:72999941-72999960 Msa0661480:intron 35.0%
AGCAACGACTAATGATACTA+TGG + chr4_3:73000079-73000098 None:intergenic 35.0%
TGTTATGAGAAGAAGTTAGG+AGG - chr4_3:73000457-73000476 Msa0661480:CDS 35.0%
GAGGAAGGGAAATTGAAAAT+CGG - chr4_3:73000476-73000495 Msa0661480:intron 35.0%
! ACTGTCTAGAAGTATGTTTC+TGG + chr4_3:73000856-73000875 None:intergenic 35.0%
! TATTGAAAGGGTGCAAAGCA+TGG - chr4_3:72994494-72994513 Msa0661480:three_prime_UTR 40.0%
TGCAAATCTGCTGCAATTAC+CGG - chr4_3:72994561-72994580 Msa0661480:three_prime_UTR 40.0%
ATTTACCATTCTATCCTCCC+AGG - chr4_3:72994697-72994716 Msa0661480:three_prime_UTR 40.0%
GGGAAACAATGGTCAGAAAA+AGG + chr4_3:72994874-72994893 None:intergenic 40.0%
AACTTTGAGCACCTTAAGAG+TGG + chr4_3:72994943-72994962 None:intergenic 40.0%
ATTTGAACAAAGGCTTACGG+AGG + chr4_3:72995064-72995083 None:intergenic 40.0%
TCCGTAAGCCTTTGTTCAAA+TGG - chr4_3:72995063-72995082 Msa0661480:intron 40.0%
GCCATTTGAACAAAGGCTTA+CGG + chr4_3:72995067-72995086 None:intergenic 40.0%
! CACAGTTGTCTGTGAGTTTT+AGG - chr4_3:72995142-72995161 Msa0661480:CDS 40.0%
GGTTAAGTAGTTGCGAACAT+AGG - chr4_3:72995242-72995261 Msa0661480:CDS 40.0%
TATTATCTTCCTTGTGTCGC+AGG - chr4_3:72995476-72995495 Msa0661480:CDS 40.0%
ATGTCAGCAACACTTAACGA+AGG - chr4_3:72995576-72995595 Msa0661480:CDS 40.0%
AGCAACACTTAACGAAGGAA+AGG - chr4_3:72995581-72995600 Msa0661480:CDS 40.0%
GCAACACTTAACGAAGGAAA+GGG - chr4_3:72995582-72995601 Msa0661480:CDS 40.0%
ACTTAACGAAGGAAAGGGAA+AGG - chr4_3:72995587-72995606 Msa0661480:CDS 40.0%
! AAGAGGGAATATCTTTAGGG+CGG + chr4_3:72995653-72995672 None:intergenic 40.0%
GAATAAGTTGCCAAGGAAGA+GGG + chr4_3:72995669-72995688 None:intergenic 40.0%
AGAATAAGTTGCCAAGGAAG+AGG + chr4_3:72995670-72995689 None:intergenic 40.0%
GTAACTTTACCTAAAGGCCT+TGG - chr4_3:72995690-72995709 Msa0661480:intron 40.0%
! TCAGCTTGCGTAATTTTCTC+TGG + chr4_3:72995777-72995796 None:intergenic 40.0%
AATAGAGTCCTACACAAAGC+TGG - chr4_3:72995890-72995909 Msa0661480:intron 40.0%
ACAATTGGCAGGTATGAGAA+TGG + chr4_3:72995972-72995991 None:intergenic 40.0%
GGAGATTGAGATATCCCATT+GGG - chr4_3:72996043-72996062 Msa0661480:intron 40.0%
GAGATTGAGATATCCCATTG+GGG - chr4_3:72996044-72996063 Msa0661480:intron 40.0%
! AGAGCAAAGGAGAATTTTCC+AGG - chr4_3:72996114-72996133 Msa0661480:intron 40.0%
ATCACAGAAACAAGGTAACC+TGG + chr4_3:72996135-72996154 None:intergenic 40.0%
TAAACAGAATGAGCTCTTGG+TGG + chr4_3:72996282-72996301 None:intergenic 40.0%
GAGCTCATTCTGTTTACTAC+AGG - chr4_3:72996286-72996305 Msa0661480:intron 40.0%
TTTGTGGGGTGACTCAAAAA+AGG - chr4_3:72996338-72996357 Msa0661480:intron 40.0%
! TTTTCCAGCCACCAAAAAGT+GGG + chr4_3:72996474-72996493 None:intergenic 40.0%
TGGTTCCCCCATTAATGATT+TGG - chr4_3:72996576-72996595 Msa0661480:intron 40.0%
! GATTGACACTCTTGTTGTGA+AGG - chr4_3:72996600-72996619 Msa0661480:intron 40.0%
TTCACAGGAAATGGAACAGA+TGG + chr4_3:72996978-72996997 None:intergenic 40.0%
TCCTGTGAAAGAAAGACATG+AGG - chr4_3:72996989-72997008 Msa0661480:intron 40.0%
ACCTCATGTCTTTCTTTCAC+AGG + chr4_3:72996993-72997012 None:intergenic 40.0%
! GCAGACAAAGTTTTCACACT+TGG - chr4_3:72997104-72997123 Msa0661480:intron 40.0%
TACTCCCTCCATCTCATATT+AGG - chr4_3:72997319-72997338 Msa0661480:intron 40.0%
GACACCTAATATGAGATGGA+GGG + chr4_3:72997326-72997345 None:intergenic 40.0%
AAGGGACACCTAATATGAGA+TGG + chr4_3:72997330-72997349 None:intergenic 40.0%
!!! GTCCCTTTTGAGTTTTACAC+GGG - chr4_3:72997343-72997362 Msa0661480:intron 40.0%
!!! GACGACACCTATTTTTGAGA+CGG - chr4_3:72997566-72997585 Msa0661480:intron 40.0%
!!! ACACCTATTTTTGAGACGGA+GGG - chr4_3:72997570-72997589 Msa0661480:intron 40.0%
AGTGTCCTGAATTTGTAAGG+AGG - chr4_3:72997599-72997618 Msa0661480:intron 40.0%
GTGTCCTGAATTTGTAAGGA+GGG - chr4_3:72997600-72997619 Msa0661480:intron 40.0%
ACTAGCTGGATTTGTAAGGA+TGG - chr4_3:72997785-72997804 Msa0661480:intron 40.0%
TGGATTTGTAAGGATGGTGT+AGG - chr4_3:72997791-72997810 Msa0661480:intron 40.0%
AGACCTACTAGTTGTGATCA+TGG - chr4_3:72997948-72997967 Msa0661480:intron 40.0%
CTACCATGATCACAACTAGT+AGG + chr4_3:72997954-72997973 None:intergenic 40.0%
GAAACAGATCGTGTATGTGT+TGG - chr4_3:72998178-72998197 Msa0661480:intron 40.0%
GTAAAGGAATAGAAGGTGAG+TGG - chr4_3:72998206-72998225 Msa0661480:CDS 40.0%
! AATAGAAGGTGAGTGGCTTT+TGG - chr4_3:72998213-72998232 Msa0661480:CDS 40.0%
! ATAGAAGGTGAGTGGCTTTT+GGG - chr4_3:72998214-72998233 Msa0661480:CDS 40.0%
GGGAATAGCTCCAAATTAAC+TGG - chr4_3:72998234-72998253 Msa0661480:CDS 40.0%
TATACTGGGTGTGATACTGA+TGG - chr4_3:72998576-72998595 Msa0661480:intron 40.0%
ATACTGGGTGTGATACTGAT+GGG - chr4_3:72998577-72998596 Msa0661480:intron 40.0%
GCATTGAGAAAACTCAAGCA+TGG - chr4_3:72998601-72998620 Msa0661480:intron 40.0%
CTCAAGCATGGTAGTCAAAT+CGG - chr4_3:72998613-72998632 Msa0661480:intron 40.0%
TCAAGCATGGTAGTCAAATC+GGG - chr4_3:72998614-72998633 Msa0661480:intron 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr4_3:72998778-72998797 Msa0661480:CDS 40.0%
TAAGGTGAATTCTAGCCACT+AGG + chr4_3:72998796-72998815 None:intergenic 40.0%
CCCCACTTATTCACCTTATA+AGG + chr4_3:72998814-72998833 None:intergenic 40.0%
TCTCTGCTCATTCACTAATG+GGG + chr4_3:72999017-72999036 None:intergenic 40.0%
CTCTCTGCTCATTCACTAAT+GGG + chr4_3:72999018-72999037 None:intergenic 40.0%
TCTCTCTGCTCATTCACTAA+TGG + chr4_3:72999019-72999038 None:intergenic 40.0%
TAGACCGTAGAGAGAAAAAG+AGG - chr4_3:72999077-72999096 Msa0661480:CDS 40.0%
AGAGAGAAAAAGAGGAAGTG+TGG - chr4_3:72999085-72999104 Msa0661480:CDS 40.0%
! GAGAGAAAAAGAGGAAGTGT+GGG - chr4_3:72999086-72999105 Msa0661480:CDS 40.0%
CAAAACCCTAGAACAGAAAG+CGG - chr4_3:72999177-72999196 Msa0661480:intron 40.0%
GTGTTTCACTTGCAGAAACT+GGG + chr4_3:72999302-72999321 None:intergenic 40.0%
CCTGCTATACATGGTCATTT+GGG - chr4_3:72999374-72999393 Msa0661480:CDS 40.0%
!! GGCTGTTTTCATATCGTATC+GGG - chr4_3:72999425-72999444 Msa0661480:CDS 40.0%
ATACGTATCGTGGGATACAT+GGG - chr4_3:72999448-72999467 Msa0661480:CDS 40.0%
AAAATCGACGTGTAAGGTGA+GGG + chr4_3:72999549-72999568 None:intergenic 40.0%
CCTTACAAAATCGACGTGTA+AGG + chr4_3:72999555-72999574 None:intergenic 40.0%
!!! CCTTACACGTCGATTTTGTA+AGG - chr4_3:72999552-72999571 Msa0661480:CDS 40.0%
!! TCATACTTAGATGGGCTGAT+GGG + chr4_3:72999672-72999691 None:intergenic 40.0%
!! TTCATACTTAGATGGGCTGA+TGG + chr4_3:72999673-72999692 None:intergenic 40.0%
ATCAGCCCATCTAAGTATGA+AGG - chr4_3:72999672-72999691 Msa0661480:CDS 40.0%
AGACACGACAACTAGAGAAA+AGG - chr4_3:72999707-72999726 Msa0661480:CDS 40.0%
GACACGACAACTAGAGAAAA+GGG - chr4_3:72999708-72999727 Msa0661480:CDS 40.0%
!! GAGCCGTTAATGTTGATTTC+TGG - chr4_3:72999847-72999866 Msa0661480:CDS 40.0%
AGTTGATTACCTCTTCCCAT+TGG + chr4_3:72999960-72999979 None:intergenic 40.0%
GGTTCAAGCAACTATTCATC+AGG - chr4_3:73000052-73000071 Msa0661480:intron 40.0%
! TCTAGGACAGGTGATATTCA+AGG - chr4_3:73000140-73000159 Msa0661480:intron 40.0%
CTAGGACAGGTGATATTCAA+GGG - chr4_3:73000141-73000160 Msa0661480:intron 40.0%
!! CGAGCTATCAACTGATTTTC+TGG + chr4_3:73000177-73000196 None:intergenic 40.0%
GAAGACTGCAAAAATGTCAC+AGG + chr4_3:73000230-73000249 None:intergenic 40.0%
GACCTTGGGTAATATTTGAG+CGG + chr4_3:73000261-73000280 None:intergenic 40.0%
!! TACCCAAGGTCATTTTGGAA+TGG - chr4_3:73000270-73000289 Msa0661480:intron 40.0%
AGCCATTCCAAAATGACCTT+GGG + chr4_3:73000275-73000294 None:intergenic 40.0%
AAGCCATTCCAAAATGACCT+TGG + chr4_3:73000276-73000295 None:intergenic 40.0%
AGATTTGCAGGAGAAGCTTA+TGG - chr4_3:73000411-73000430 Msa0661480:intron 40.0%
ATGAGAAGAAGTTAGGAGGA+AGG - chr4_3:73000461-73000480 Msa0661480:CDS 40.0%
TGAGAAGAAGTTAGGAGGAA+GGG - chr4_3:73000462-73000481 Msa0661480:CDS 40.0%
!!! TTAGCGATACTTGTTTTGCG+TGG - chr4_3:73000678-73000697 Msa0661480:CDS 40.0%
!!! TAGCGATACTTGTTTTGCGT+GGG - chr4_3:73000679-73000698 Msa0661480:CDS 40.0%
GCAAATCTGCTGCAATTACC+GGG - chr4_3:72994562-72994581 Msa0661480:three_prime_UTR 45.0%
!!! TCAGTGAGAGCGTTTTGGTT+TGG - chr4_3:72994594-72994613 Msa0661480:three_prime_UTR 45.0%
ACTTACACGACGGTCAACTT+TGG + chr4_3:72994744-72994763 None:intergenic 45.0%
! GGGCATTGCCATTTGAACAA+AGG + chr4_3:72995074-72995093 None:intergenic 45.0%
TGTGTCCAGCCTAGCAATAT+GGG + chr4_3:72995096-72995115 None:intergenic 45.0%
ATGTGTCCAGCCTAGCAATA+TGG + chr4_3:72995097-72995116 None:intergenic 45.0%
TGAAGTTCCAGGTTTGAACC+CGG + chr4_3:72995124-72995143 None:intergenic 45.0%
ACAGACAACTGTGAAGTTCC+AGG + chr4_3:72995135-72995154 None:intergenic 45.0%
AGTTGCGAACATAGGCTTAG+AGG - chr4_3:72995250-72995269 Msa0661480:CDS 45.0%
GGAAAGGCGAAATCATCTTC+TGG - chr4_3:72995603-72995622 Msa0661480:CDS 45.0%
GCGAAATCATCTTCTGGTGT+TGG - chr4_3:72995609-72995628 Msa0661480:CDS 45.0%
TTAGGGCGGACAACTTCATA+GGG + chr4_3:72995639-72995658 None:intergenic 45.0%
! TTTAGGGCGGACAACTTCAT+AGG + chr4_3:72995640-72995659 None:intergenic 45.0%
TTTACCTAAAGGCCTTGGGA+AGG - chr4_3:72995695-72995714 Msa0661480:intron 45.0%
TTACCTAAAGGCCTTGGGAA+GGG - chr4_3:72995696-72995715 Msa0661480:intron 45.0%
TCTTTCTCCTTATCCCGTGA+AGG - chr4_3:72995833-72995852 Msa0661480:intron 45.0%
ATTGAGCGATTGGACCTTCA+CGG + chr4_3:72995850-72995869 None:intergenic 45.0%
TAGGACTCTATTCTTGCCTC+AGG + chr4_3:72995882-72995901 None:intergenic 45.0%
ATTGGCAGGTATGAGAATGG+AGG + chr4_3:72995969-72995988 None:intergenic 45.0%
AACTCTTTAGCAACGGCGAA+GGG + chr4_3:72996017-72996036 None:intergenic 45.0%
CCTCACCAACTCTTTAGCAA+CGG + chr4_3:72996024-72996043 None:intergenic 45.0%
!! CGTTGCTAAAGAGTTGGTGA+GGG - chr4_3:72996022-72996041 Msa0661480:intron 45.0%
GGGAGATTGAGATATCCCAT+TGG - chr4_3:72996042-72996061 Msa0661480:intron 45.0%
GATCTGTACATTGCCCCAAT+GGG + chr4_3:72996060-72996079 None:intergenic 45.0%
TGATCTGTACATTGCCCCAA+TGG + chr4_3:72996061-72996080 None:intergenic 45.0%
GCAGATGCACCTCTTACATA+TGG + chr4_3:72996234-72996253 None:intergenic 45.0%
! TAAGAGGTGCATCTGCCTTT+AGG - chr4_3:72996238-72996257 Msa0661480:intron 45.0%
CAGAACTTGAGATCGAACCT+CGG - chr4_3:72996446-72996465 Msa0661480:intron 45.0%
! GTTTTCCAGCCACCAAAAAG+TGG + chr4_3:72996475-72996494 None:intergenic 45.0%
AAGTGGCAACCCATATCCAA+TGG + chr4_3:72996506-72996525 None:intergenic 45.0%
CCAAACAAGAAGTCCTGAAG+TGG + chr4_3:72996523-72996542 None:intergenic 45.0%
CCACTTCAGGACTTCTTGTT+TGG - chr4_3:72996520-72996539 Msa0661480:intron 45.0%
! GACTTCTTGTTTGGAGTCGA+TGG - chr4_3:72996529-72996548 Msa0661480:intron 45.0%
AACCTGAAAGTTGCAAGCAC+CGG + chr4_3:72996925-72996944 None:intergenic 45.0%
!! TTTCAGGTTGTCTTGCCAGA+GGG - chr4_3:72996936-72996955 Msa0661480:intron 45.0%
TTCTTCTCTAGCACGACAAC+AGG + chr4_3:72997144-72997163 None:intergenic 45.0%
GGACACCTAATATGAGATGG+AGG + chr4_3:72997327-72997346 None:intergenic 45.0%
!!! GACACCTATTTTTGAGACGG+AGG - chr4_3:72997569-72997588 Msa0661480:intron 45.0%
ACTCCCTCCGTCTCAAAAAT+AGG + chr4_3:72997576-72997595 None:intergenic 45.0%
AAATCCAGCTAGTGCGTTGA+GGG + chr4_3:72997778-72997797 None:intergenic 45.0%
ACGCACTAGCTGGATTTGTA+AGG - chr4_3:72997781-72997800 Msa0661480:intron 45.0%
TAGGCTAGTACTACTGGGTT+GGG + chr4_3:72997893-72997912 None:intergenic 45.0%
AAGCCTAGGCTAGTACTACT+GGG + chr4_3:72997898-72997917 None:intergenic 45.0%
TAAGCCTAGGCTAGTACTAC+TGG + chr4_3:72997899-72997918 None:intergenic 45.0%
GTATGTGTTGGAAGCCGTAA+AGG - chr4_3:72998190-72998209 Msa0661480:intron 45.0%
GGAAGCCGTAAAGGAATAGA+AGG - chr4_3:72998199-72998218 Msa0661480:CDS 45.0%
TGTAACCCATCAGCTATTGC+AGG + chr4_3:72998334-72998353 None:intergenic 45.0%
! CAAACACCCACGGTTTTCTT+GGG + chr4_3:72998366-72998385 None:intergenic 45.0%
CAAGAAAACCGTGGGTGTTT+GGG - chr4_3:72998365-72998384 Msa0661480:intron 45.0%
AAGAAAACCGTGGGTGTTTG+GGG - chr4_3:72998366-72998385 Msa0661480:intron 45.0%
TTATGGAACAGTCCTGGAAC+CGG + chr4_3:72998420-72998439 None:intergenic 45.0%
AGGGGGGATACTAACTATAC+TGG - chr4_3:72998561-72998580 Msa0661480:intron 45.0%
GGGGGGATACTAACTATACT+GGG - chr4_3:72998562-72998581 Msa0661480:intron 45.0%
ATTATTATATGCAGGGGCCG+GGG + chr4_3:72998852-72998871 None:intergenic 45.0%
CATTATTATATGCAGGGGCC+GGG + chr4_3:72998853-72998872 None:intergenic 45.0%
GCATTATTATATGCAGGGGC+CGG + chr4_3:72998854-72998873 None:intergenic 45.0%
! ACAAGAACGTGTGCAGCTTT+TGG - chr4_3:72999121-72999140 Msa0661480:CDS 45.0%
! CAAGAACGTGTGCAGCTTTT+GGG - chr4_3:72999122-72999141 Msa0661480:CDS 45.0%
GTCAACCGCTTTCTGTTCTA+GGG + chr4_3:72999185-72999204 None:intergenic 45.0%
ACATGGGTCGGTACTAGAAA+CGG + chr4_3:72999241-72999260 None:intergenic 45.0%
CGTGTTTCACTTGCAGAAAC+TGG + chr4_3:72999303-72999322 None:intergenic 45.0%
GCCTGCTATACATGGTCATT+TGG - chr4_3:72999373-72999392 Msa0661480:CDS 45.0%
CCCAAATGACCATGTATAGC+AGG + chr4_3:72999377-72999396 None:intergenic 45.0%
CCATGGGCAAATACGTATCA+GGG + chr4_3:72999407-72999426 None:intergenic 45.0%
GATACGTATCGTGGGATACA+TGG - chr4_3:72999447-72999466 Msa0661480:CDS 45.0%
TACGTATCGTGGGATACATG+GGG - chr4_3:72999449-72999468 Msa0661480:CDS 45.0%
AAATCGACGTGTAAGGTGAG+GGG + chr4_3:72999548-72999567 None:intergenic 45.0%
CAAAATCGACGTGTAAGGTG+AGG + chr4_3:72999550-72999569 None:intergenic 45.0%
!! CATACTTAGATGGGCTGATG+GGG + chr4_3:72999671-72999690 None:intergenic 45.0%
! CAGGGTGGTTTGACTTTAGT+AGG - chr4_3:72999757-72999776 Msa0661480:CDS 45.0%
TCAACCGTCTTTCTATGCTC+AGG - chr4_3:72999824-72999843 Msa0661480:CDS 45.0%
CAACCGTCTTTCTATGCTCA+GGG - chr4_3:72999825-72999844 Msa0661480:CDS 45.0%
TGCATGCATGTAGACAATGG+AGG + chr4_3:72999893-72999912 None:intergenic 45.0%
GTCTGCATGCATGTAGACAA+TGG + chr4_3:72999896-72999915 None:intergenic 45.0%
CATCGTTGCGTGATCTTTCT+AGG - chr4_3:73000123-73000142 Msa0661480:intron 45.0%
!! TTGCGTGATCTTTCTAGGAC+AGG - chr4_3:73000128-73000147 Msa0661480:intron 45.0%
CTCGTTGAAAGAGCTCACAA+AGG - chr4_3:73000193-73000212 Msa0661480:intron 45.0%
GGTAATATTTGAGCGGCTTG+TGG + chr4_3:73000254-73000273 None:intergenic 45.0%
AGCCGCTCAAATATTACCCA+AGG - chr4_3:73000256-73000275 Msa0661480:intron 45.0%
GGTGGAGGAAGTAATTGCTA+AGG - chr4_3:73000384-73000403 Msa0661480:intron 45.0%
TGCTAAGGAGAGAGATTTGC+AGG - chr4_3:73000399-73000418 Msa0661480:intron 45.0%
!! AAACAAAAATAAAATAATTA+TGG + chr4_3:73000360-73000379 None:intergenic 5.0%
TCTCACTGAACCAGAGATCC+CGG + chr4_3:72994583-72994602 None:intergenic 50.0%
!!! CTGGTTCAGTGAGAGCGTTT+TGG - chr4_3:72994589-72994608 Msa0661480:three_prime_UTR 50.0%
TGGTAAGGATGAGATCGGAG+AGG + chr4_3:72994724-72994743 None:intergenic 50.0%
CACGACGGTCAACTTTGGTA+AGG + chr4_3:72994739-72994758 None:intergenic 50.0%
!! CCTTAAGAGTGGTAGTGGTG+CGG + chr4_3:72994932-72994951 None:intergenic 50.0%
GAGCACCTTAAGAGTGGTAG+TGG + chr4_3:72994937-72994956 None:intergenic 50.0%
TGTCCAGCCTAGCAATATGG+GGG + chr4_3:72995094-72995113 None:intergenic 50.0%
GTGTCCAGCCTAGCAATATG+GGG + chr4_3:72995095-72995114 None:intergenic 50.0%
CTAGGCTGGACACATTCATC+CGG - chr4_3:72995102-72995121 Msa0661480:intron 50.0%
TAGGCTGGACACATTCATCC+GGG - chr4_3:72995103-72995122 Msa0661480:intron 50.0%
CATTCATCCGGGTTCAAACC+TGG - chr4_3:72995114-72995133 Msa0661480:CDS 50.0%
CATTCTCTACCTGCGACACA+AGG + chr4_3:72995488-72995507 None:intergenic 50.0%
TCAAACTTTCGCCCTTCCCA+AGG + chr4_3:72995710-72995729 None:intergenic 50.0%
GAAGGGCGAAAGTTTGACGT+TGG - chr4_3:72995713-72995732 Msa0661480:intron 50.0%
GATTGGACCTTCACGGGATA+AGG + chr4_3:72995843-72995862 None:intergenic 50.0%
TTGAGCGATTGGACCTTCAC+GGG + chr4_3:72995849-72995868 None:intergenic 50.0%
CAACTCTTTAGCAACGGCGA+AGG + chr4_3:72996018-72996037 None:intergenic 50.0%
CTTCGCCGTTGCTAAAGAGT+TGG - chr4_3:72996016-72996035 Msa0661480:intron 50.0%
!! CCGTTGCTAAAGAGTTGGTG+AGG - chr4_3:72996021-72996040 Msa0661480:intron 50.0%
CTGCTGCAGACTTGACTATC+AGG - chr4_3:72996203-72996222 Msa0661480:intron 50.0%
TGCACCTCTTACATATGGCC+TGG + chr4_3:72996229-72996248 None:intergenic 50.0%
CTTGGCAGTAAGACGCCTAA+AGG + chr4_3:72996256-72996275 None:intergenic 50.0%
GTCACCCCACAAACTAGAAG+TGG + chr4_3:72996331-72996350 None:intergenic 50.0%
GTGGGGTGACTCAAAAAAGG+TGG - chr4_3:72996341-72996360 Msa0661480:intron 50.0%
!! GAACCTCGGTACCCACTTTT+TGG - chr4_3:72996460-72996479 Msa0661480:intron 50.0%
! TGGATATGGGTTGCCACTTC+AGG - chr4_3:72996507-72996526 Msa0661480:intron 50.0%
!! CTTTCAGGTTGTCTTGCCAG+AGG - chr4_3:72996935-72996954 Msa0661480:intron 50.0%
CAAATCCAGCTAGTGCGTTG+AGG + chr4_3:72997779-72997798 None:intergenic 50.0%
!! CTTTTGGTGGGTGACTCGAA+TGG + chr4_3:72997861-72997880 None:intergenic 50.0%
CATTCGAGTCACCCACCAAA+AGG - chr4_3:72997859-72997878 Msa0661480:intron 50.0%
CTAGGCTAGTACTACTGGGT+TGG + chr4_3:72997894-72997913 None:intergenic 50.0%
! CAACCCAGTAGTACTAGCCT+AGG - chr4_3:72997892-72997911 Msa0661480:intron 50.0%
GTTCGCCTGCAATAGCTGAT+GGG - chr4_3:72998326-72998345 Msa0661480:intron 50.0%
AACCTGACCCAAGAAAACCG+TGG - chr4_3:72998356-72998375 Msa0661480:intron 50.0%
ACCTGACCCAAGAAAACCGT+GGG - chr4_3:72998357-72998376 Msa0661480:intron 50.0%
! CCAAACACCCACGGTTTTCT+TGG + chr4_3:72998367-72998386 None:intergenic 50.0%
CCAAGAAAACCGTGGGTGTT+TGG - chr4_3:72998364-72998383 Msa0661480:intron 50.0%
CAGAAAACCCCAAACACCCA+CGG + chr4_3:72998376-72998395 None:intergenic 50.0%
!! GGTGTTTGGGGTTTTCTGGA+GGG - chr4_3:72998378-72998397 Msa0661480:intron 50.0%
TATGGAACAGTCCTGGAACC+GGG + chr4_3:72998419-72998438 None:intergenic 50.0%
TGGGATATGCATCGTGGGAT+AGG - chr4_3:72998541-72998560 Msa0661480:intron 50.0%
GGGATATGCATCGTGGGATA+GGG - chr4_3:72998542-72998561 Msa0661480:intron 50.0%
GGATATGCATCGTGGGATAG+GGG - chr4_3:72998543-72998562 Msa0661480:intron 50.0%
GATATGCATCGTGGGATAGG+GGG - chr4_3:72998544-72998563 Msa0661480:intron 50.0%
ATATGCATCGTGGGATAGGG+GGG - chr4_3:72998545-72998564 Msa0661480:intron 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG - chr4_3:72998818-72998837 Msa0661480:CDS 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + chr4_3:72998882-72998901 None:intergenic 50.0%
GGGGCAGAACCCTTAGAATT+TGG + chr4_3:72998998-72999017 None:intergenic 50.0%
GAGCAGAGAGAAACAGAGCA+TGG - chr4_3:72999028-72999047 Msa0661480:intron 50.0%
GGTCAACCGCTTTCTGTTCT+AGG + chr4_3:72999186-72999205 None:intergenic 50.0%
! TTTGACGGGTCACACAATCC+CGG - chr4_3:72999214-72999233 Msa0661480:intron 50.0%
CATGGGTCGGTACTAGAAAC+GGG + chr4_3:72999240-72999259 None:intergenic 50.0%
TCACTTGCAGAAACTGGGTC+AGG + chr4_3:72999297-72999316 None:intergenic 50.0%
TGGGATACGCCTGCTATACA+TGG - chr4_3:72999365-72999384 Msa0661480:CDS 50.0%
CCCTGATACGTATTTGCCCA+TGG - chr4_3:72999404-72999423 Msa0661480:CDS 50.0%
GCCATGGGCAAATACGTATC+AGG + chr4_3:72999408-72999427 None:intergenic 50.0%
TCGTATCGGGATACGTATCG+TGG - chr4_3:72999438-72999457 Msa0661480:CDS 50.0%
CGTATCGGGATACGTATCGT+GGG - chr4_3:72999439-72999458 Msa0661480:CDS 50.0%
TACTCTTGCGCCTGTATTGC+AGG - chr4_3:72999789-72999808 Msa0661480:CDS 50.0%
GCTCCCTGAGCATAGAAAGA+CGG + chr4_3:72999831-72999850 None:intergenic 50.0%
GGCAAAGATCCAATGGGAAG+AGG - chr4_3:72999948-72999967 Msa0661480:intron 50.0%
GCTGCAATTACCGGGATCTC+TGG - chr4_3:72994570-72994589 Msa0661480:three_prime_UTR 55.0%
GAGGACCTGGGAGGATAGAA+TGG + chr4_3:72994705-72994724 None:intergenic 55.0%
GATGAGATCGGAGAGGACCT+GGG + chr4_3:72994717-72994736 None:intergenic 55.0%
CCGCACCACTACCACTCTTA+AGG - chr4_3:72994929-72994948 Msa0661480:CDS 55.0%
GGCAATGCCCCCATATTGCT+AGG - chr4_3:72995084-72995103 Msa0661480:intron 55.0%
ATGCCCCCATATTGCTAGGC+TGG - chr4_3:72995088-72995107 Msa0661480:intron 55.0%
GTGTCGCAGGTAGAGAATGC+AGG - chr4_3:72995489-72995508 Msa0661480:CDS 55.0%
GCAGACTTGACTATCAGGCC+AGG - chr4_3:72996208-72996227 Msa0661480:intron 55.0%
CAGGCCAGGCCATATGTAAG+AGG - chr4_3:72996222-72996241 Msa0661480:intron 55.0%
! ATGAGCTCTTGGTGGCAGCT+TGG + chr4_3:72996274-72996293 None:intergenic 55.0%
! CCACCAAAAAGTGGGTACCG+AGG + chr4_3:72996466-72996485 None:intergenic 55.0%
!!! CCTCGGTACCCACTTTTTGG+TGG - chr4_3:72996463-72996482 Msa0661480:intron 55.0%
!!! GGTACCCACTTTTTGGTGGC+TGG - chr4_3:72996467-72996486 Msa0661480:intron 55.0%
TGCCGGTGCTTGCAACTTTC+AGG - chr4_3:72996920-72996939 Msa0661480:intron 55.0%
! GGGTGCATGGACCTTTTGGT+GGG + chr4_3:72997873-72997892 None:intergenic 55.0%
! TGGGTGCATGGACCTTTTGG+TGG + chr4_3:72997874-72997893 None:intergenic 55.0%
! GGTTGGGTGCATGGACCTTT+TGG + chr4_3:72997877-72997896 None:intergenic 55.0%
! GTACTACTGGGTTGGGTGCA+TGG + chr4_3:72997886-72997905 None:intergenic 55.0%
GGTTCGCCTGCAATAGCTGA+TGG - chr4_3:72998325-72998344 Msa0661480:intron 55.0%
! ACCCACGGTTTTCTTGGGTC+AGG + chr4_3:72998361-72998380 None:intergenic 55.0%
!! CGTGGGTGTTTGGGGTTTTC+TGG - chr4_3:72998374-72998393 Msa0661480:intron 55.0%
!! GGGTGTTTGGGGTTTTCTGG+AGG - chr4_3:72998377-72998396 Msa0661480:intron 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG - chr4_3:72998819-72998838 Msa0661480:CDS 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG - chr4_3:72998820-72998839 Msa0661480:CDS 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + chr4_3:72998883-72998902 None:intergenic 55.0%
CCTCGTGAGCATAGCTCAGT+TGG + chr4_3:72998887-72998906 None:intergenic 55.0%
CCAACTGAGCTATGCTCACG+AGG - chr4_3:72998884-72998903 Msa0661480:CDS 55.0%
! AGAAACTGGGTCAGGTTGCG+CGG + chr4_3:72999289-72999308 None:intergenic 55.0%
!! CTTAGATGGGCTGATGGGGT+TGG + chr4_3:72999667-72999686 None:intergenic 55.0%
GGATGAGATCGGAGAGGACC+TGG + chr4_3:72994718-72994737 None:intergenic 60.0%
TCGCCCTTCCCAAGGCCTTT+AGG + chr4_3:72995702-72995721 None:intergenic 60.0%
CATGGCGGTGCTCAGAGCAA+AGG - chr4_3:72996101-72996120 Msa0661480:intron 60.0%
GCATCCCTCAACGCACTAGC+TGG - chr4_3:72997771-72997790 Msa0661480:intron 60.0%
GGTGGGTGACTCGAATGGAC+AGG + chr4_3:72997856-72997875 None:intergenic 60.0%
GGGTCATGCAAAACCCGACC+CGG - chr4_3:72998398-72998417 Msa0661480:CDS 60.0%
AACAGTCCTGGAACCGGGTC+GGG + chr4_3:72998414-72998433 None:intergenic 60.0%
GAACAGTCCTGGAACCGGGT+CGG + chr4_3:72998415-72998434 None:intergenic 60.0%
GTCGGTACTAGAAACGGGCC+GGG + chr4_3:72999235-72999254 None:intergenic 60.0%
GGTCGGTACTAGAAACGGGC+CGG + chr4_3:72999236-72999255 None:intergenic 60.0%
GAGATCGGAGAGGACCTGGG+AGG + chr4_3:72994714-72994733 None:intergenic 65.0%
GCAAAACCCGACCCGGTTCC+AGG - chr4_3:72998405-72998424 Msa0661480:CDS 65.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr4_3:72998832-72998851 Msa0661480:CDS 70.0%
! CTGGGTCAGGTTGCGCGGTC+CGG + chr4_3:72999284-72999303 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr4_3:72998840-72998859 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 72994489 73000901 72994489 ID=Msa0661480;Name=Msa0661480
chr4_3 mRNA 72994489 73000901 72994489 ID=Msa0661480-mRNA-1;Parent=Msa0661480;Name=Msa0661480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=161|0.88|0.9|1|1|1|10|325|633
chr4_3 exon 72994489 72995005 72994489 ID=Msa0661480-mRNA-1:exon:21931;Parent=Msa0661480-mRNA-1
chr4_3 exon 72995113 72995337 72995113 ID=Msa0661480-mRNA-1:exon:21930;Parent=Msa0661480-mRNA-1
chr4_3 exon 72995421 72995630 72995421 ID=Msa0661480-mRNA-1:exon:21929;Parent=Msa0661480-mRNA-1
chr4_3 exon 72998193 72998282 72998193 ID=Msa0661480-mRNA-1:exon:21928;Parent=Msa0661480-mRNA-1
chr4_3 exon 72998380 72998448 72998380 ID=Msa0661480-mRNA-1:exon:21927;Parent=Msa0661480-mRNA-1
chr4_3 exon 72998769 72998945 72998769 ID=Msa0661480-mRNA-1:exon:21926;Parent=Msa0661480-mRNA-1
chr4_3 exon 72999031 72999178 72999031 ID=Msa0661480-mRNA-1:exon:21925;Parent=Msa0661480-mRNA-1
chr4_3 exon 72999255 72999892 72999255 ID=Msa0661480-mRNA-1:exon:21924;Parent=Msa0661480-mRNA-1
chr4_3 exon 73000440 73000484 73000440 ID=Msa0661480-mRNA-1:exon:21923;Parent=Msa0661480-mRNA-1
chr4_3 exon 73000633 73000901 73000633 ID=Msa0661480-mRNA-1:exon:21922;Parent=Msa0661480-mRNA-1
chr4_3 five_prime_UTR 73000741 73000901 73000741 ID=Msa0661480-mRNA-1:five_prime_utr;Parent=Msa0661480-mRNA-1
chr4_3 CDS 73000633 73000740 73000633 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 73000440 73000484 73000440 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72999255 72999892 72999255 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72999031 72999178 72999031 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72998769 72998945 72998769 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72998380 72998448 72998380 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72998193 72998282 72998193 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72995421 72995630 72995421 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72995113 72995337 72995113 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 CDS 72994814 72995005 72994814 ID=Msa0661480-mRNA-1:cds;Parent=Msa0661480-mRNA-1
chr4_3 three_prime_UTR 72994489 72994813 72994489 ID=Msa0661480-mRNA-1:three_prime_utr;Parent=Msa0661480-mRNA-1
Gene Sequence

>Msa0661480

ATGATGACGATGATGAGGTTGAATCTGCTTCTTTCGTTTGTATTCACATTTACCATTCTATCCTCCCAGGTCCTCTCCGATCTCATCCTTACCAAAGTTGACCGTCGTATTGATCTGTCATCACAAATTGTCCGCACCACTACCACTCTTAAGGTAGAGAATGCAGGATCTGATGTTGTTTCAGAAATCTTGTTGACCTTTCCTGATAACCATGTAAAGCACTTAGCATACATGTCAGCAACACTTAACGAAGGAAAGGGAAAGGCGAAATCATCTTCTGGTGTTGGTTTACCCTATGAAGTTGTCCGCCCTAAAGATATTCCCTCTTCCTTGGCAACTTATTCTGTAACTTTACCTAAAGGCCTTGGGAAGGGCGAAAGTTTGACGTTGGACATCTTGACAGTTTTTACCCATATATTGCAACCATTTCCAGAGAAAATTACGCAAGCTGACATTCAACTTCTGCTGTTTCAAGATAGTGCACAATATCTTTCTCCTTATCCCGTGAAGGTCCAATCGCTCAATGTTAAATTACCTGAGGCAAGAATAGAGTCCTACACAAAGCTGGAAAATACAAAACTTCAGGGATCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCATTCTCATACCTGCCAATTGTTATCCATTTTGAGAATAATCAGCCCTTCGCCGTTGCTAAAGAGTTGGTGAGGGAGATTGAGATATCCCATTGGGGCAATGTACAGATCACAGAGCATTATAATCTTGTTCATGGCGGTGCTCAGAGCAAAGGAGAATTTTCCAGACTTGACTATCAGGCCAGGCCATATGTAAGAGGTGCATCTGCCTTTAGGCGTCTTACTGCCAAGCTGCCACCAAGAGCTCATTCTGTTTACTACAGGGATGAAATCGGCAATATTTCCACTTCTAGTTTGTGGGGTGACTCAAAAAAGACAGAACTTGAGATCGAACCTCGGTACCCACTTTTTGGTGGCTGGAAAACTGCTTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGAGTCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGATTTGGTGATTGACACTCTTGTTGTGAAGGTTGTCTTGCCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAAGAAAGACATGAGACAAAGTTTTCACACTTGGATATTGCTGGTAGACCTGTTGTCGTGCTAGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGGGTGGTTTGACTTTAGTAGGTCTACTGATTACTCTTGCGCCTGTATTGCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCGTTAATGTTGATTTCTGGCTTTTTCTTTCTATTTCTTGCCTCCATTGTCTACATGCATGCAGACTTATCGATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCATCAGGTCCATAGTATCATTAGTCGTTGCTTAACAACACACGACAAGCTAGAAGCATCGTTGCGTGATCTTTCTAGGACAGGTGATATTCAAGGGTGTAAAGCAACCAGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACAAAGGAGTTGAAATCACCTGTGACATTTTTGCAGTCTTCTCCACAAGCCGCTCAAATATTACCCAAGGTGGAGGAAGTAATTGCTAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACACTACTGTTGTTGATTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAAAATCGGATTGCTTCACATCAGCAGAAAATTACATCTCTGAAACAAGAGATTTATGATCTTATGGACTTGATCGATGAGATATGA
Protein sequence

>Msa0661480

MMTMMRLNLLLSFVFTFTILSSQVLSDLILTKVDRRIDLSSQIVRTTTTLKVENAGSDVVSEILLTFPDNHVKHLAYMSATLNEGKGKAKSSSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKGESLTLDILTVFTHILQPFPEKITQADIQLLLFQDSAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFGGWKTAFTIGYGLPLQDFLFGVDGKRFLNISFGSPINDLVIDTLVVKVVLPEGSKDISPSVPFPVKERHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQGGLTLVGLLITLAPVLQVYYKFNRLSMLREPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHSIISRCLTTHDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVTFLQSSPQAAQILPKVEEVIAKERDLQEKLMAKHTTVVDCYEKKLGGREIENRIASHQQKITSLKQEIYDLMDLIDEI*