Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881510 | XP_003593237.1 | 97.403 | 539 | 14 | 0 | 2 | 540 | 3 | 541 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881510 | sp|P47924|RIBA1_ARATH | 75.000 | 504 | 112 | 4 | 20 | 521 | 38 | 529 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881510 | G7IPL5 | 97.403 | 539 | 14 | 0 | 2 | 540 | 3 | 541 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0881510 | 0.825777 | 3.895926e-54 | -8.615850e-47 |
| Msa0026420 | Msa0881510 | 0.815188 | 1.050496e-51 | -8.615850e-47 |
| Msa0030800 | Msa0881510 | 0.850309 | 1.846245e-60 | -8.615850e-47 |
| Msa0037280 | Msa0881510 | 0.813109 | 3.023508e-51 | -8.615850e-47 |
| Msa0051480 | Msa0881510 | 0.808476 | 3.040317e-50 | -8.615850e-47 |
| Msa0051730 | Msa0881510 | 0.808506 | 2.995488e-50 | -8.615850e-47 |
| Msa0054610 | Msa0881510 | 0.824803 | 6.620200e-54 | -8.615850e-47 |
| Msa0078210 | Msa0881510 | 0.844589 | 6.883493e-59 | -8.615850e-47 |
| Msa0087550 | Msa0881510 | 0.804687 | 1.916297e-49 | -8.615850e-47 |
| Msa0087900 | Msa0881510 | 0.805644 | 1.208268e-49 | -8.615850e-47 |
| Msa0092970 | Msa0881510 | 0.823247 | 1.535399e-53 | -8.615850e-47 |
| Msa0101380 | Msa0881510 | 0.804248 | 2.366153e-49 | -8.615850e-47 |
| Msa0614290 | Msa0881510 | 0.833420 | 5.389216e-56 | -8.615850e-47 |
| Msa0638810 | Msa0881510 | 0.830128 | 3.495428e-55 | -8.615850e-47 |
| Msa0638820 | Msa0881510 | 0.841108 | 5.802027e-58 | -8.615850e-47 |
| Msa0652590 | Msa0881510 | 0.803944 | 2.737029e-49 | -8.615850e-47 |
| Msa0652600 | Msa0881510 | 0.809402 | 1.925782e-50 | -8.615850e-47 |
| Msa0657340 | Msa0881510 | 0.827706 | 1.349029e-54 | -8.615850e-47 |
| Msa0660650 | Msa0881510 | 0.822358 | 2.472828e-53 | -8.615850e-47 |
| Msa0672090 | Msa0881510 | 0.816447 | 5.504211e-52 | -8.615850e-47 |
| Msa0675620 | Msa0881510 | 0.804350 | 2.253196e-49 | -8.615850e-47 |
| Msa0697510 | Msa0881510 | 0.830811 | 2.379253e-55 | -8.615850e-47 |
| Msa0697520 | Msa0881510 | 0.832212 | 1.075286e-55 | -8.615850e-47 |
| Msa0701430 | Msa0881510 | 0.810470 | 1.134712e-50 | -8.615850e-47 |
| Msa0704560 | Msa0881510 | 0.809207 | 2.120354e-50 | -8.615850e-47 |
| Msa0713060 | Msa0881510 | 0.829196 | 5.891572e-55 | -8.615850e-47 |
| Msa0716620 | Msa0881510 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0727230 | Msa0881510 | 0.822497 | 2.295271e-53 | -8.615850e-47 |
| Msa0731580 | Msa0881510 | 0.825078 | 5.701253e-54 | -8.615850e-47 |
| Msa0744550 | Msa0881510 | 0.827097 | 1.887748e-54 | -8.615850e-47 |
| Msa0744560 | Msa0881510 | 0.836341 | 9.906125e-57 | -8.615850e-47 |
| Msa0771810 | Msa0881510 | 0.800514 | 1.390991e-48 | -8.615850e-47 |
| Msa0793270 | Msa0881510 | 0.807881 | 4.069229e-50 | -8.615850e-47 |
| Msa0795320 | Msa0881510 | 0.824834 | 6.510419e-54 | -8.615850e-47 |
| Msa0806910 | Msa0881510 | 0.824747 | 6.826139e-54 | -8.615850e-47 |
| Msa0809920 | Msa0881510 | 0.810229 | 1.278456e-50 | -8.615850e-47 |
| Msa0810340 | Msa0881510 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa0816630 | Msa0881510 | 0.827662 | 1.382303e-54 | -8.615850e-47 |
| Msa0826360 | Msa0881510 | 0.834462 | 2.955816e-56 | -8.615850e-47 |
| Msa0826370 | Msa0881510 | 0.815605 | 8.485314e-52 | -8.615850e-47 |
| Msa0826380 | Msa0881510 | 0.836462 | 9.225309e-57 | -8.615850e-47 |
| Msa0826450 | Msa0881510 | 0.838190 | 3.330767e-57 | -8.615850e-47 |
| Msa0829050 | Msa0881510 | 0.803633 | 3.176472e-49 | -8.615850e-47 |
| Msa0829990 | Msa0881510 | 0.826568 | 2.526301e-54 | -8.615850e-47 |
| Msa0831880 | Msa0881510 | 0.802158 | 6.407927e-49 | -8.615850e-47 |
| Msa0129640 | Msa0881510 | 0.816009 | 6.895998e-52 | -8.615850e-47 |
| Msa0134270 | Msa0881510 | 0.806771 | 6.998146e-50 | -8.615850e-47 |
| Msa0143640 | Msa0881510 | 0.832189 | 1.089238e-55 | -8.615850e-47 |
| Msa0145640 | Msa0881510 | 0.825545 | 4.421976e-54 | -8.615850e-47 |
| Msa0146200 | Msa0881510 | 0.811420 | 7.063329e-51 | -8.615850e-47 |
| Msa0178000 | Msa0881510 | 0.805324 | 1.410370e-49 | -8.615850e-47 |
| Msa0185100 | Msa0881510 | 0.814269 | 1.678869e-51 | -8.615850e-47 |
| Msa0186240 | Msa0881510 | 0.827735 | 1.327348e-54 | -8.615850e-47 |
| Msa0189890 | Msa0881510 | 0.908216 | 2.178721e-81 | -8.615850e-47 |
| Msa0193190 | Msa0881510 | 0.800997 | 1.108333e-48 | -8.615850e-47 |
| Msa0203090 | Msa0881510 | 0.815871 | 7.401739e-52 | -8.615850e-47 |
| Msa0224210 | Msa0881510 | 0.815130 | 1.082246e-51 | -8.615850e-47 |
| Msa0368620 | Msa0881510 | 0.818321 | 2.083556e-52 | -8.615850e-47 |
| Msa0378320 | Msa0881510 | 0.821098 | 4.835664e-53 | -8.615850e-47 |
| Msa0382020 | Msa0881510 | -0.803983 | 2.686062e-49 | -8.615850e-47 |
| Msa0383900 | Msa0881510 | 0.805710 | 1.170625e-49 | -8.615850e-47 |
| Msa0385320 | Msa0881510 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0389710 | Msa0881510 | 0.825811 | 3.823537e-54 | -8.615850e-47 |
| Msa0390790 | Msa0881510 | 0.816312 | 5.900231e-52 | -8.615850e-47 |
| Msa0393100 | Msa0881510 | 0.843304 | 1.521233e-58 | -8.615850e-47 |
| Msa0397180 | Msa0881510 | 0.801586 | 8.395363e-49 | -8.615850e-47 |
| Msa0402800 | Msa0881510 | 0.809946 | 1.471738e-50 | -8.615850e-47 |
| Msa0405200 | Msa0881510 | 0.855927 | 4.541671e-62 | -8.615850e-47 |
| Msa0405210 | Msa0881510 | 0.814333 | 1.625347e-51 | -8.615850e-47 |
| Msa0423220 | Msa0881510 | 0.809852 | 1.541860e-50 | -8.615850e-47 |
| Msa0427560 | Msa0881510 | 0.830258 | 3.250255e-55 | -8.615850e-47 |
| Msa0427660 | Msa0881510 | 0.826036 | 3.380503e-54 | -8.615850e-47 |
| Msa0434300 | Msa0881510 | 0.828719 | 7.687199e-55 | -8.615850e-47 |
| Msa0434400 | Msa0881510 | 0.824416 | 8.168277e-54 | -8.615850e-47 |
| Msa0438070 | Msa0881510 | 0.804229 | 2.388226e-49 | -8.615850e-47 |
| Msa0447160 | Msa0881510 | 0.804400 | 2.200365e-49 | -8.615850e-47 |
| Msa0449500 | Msa0881510 | 0.838699 | 2.462636e-57 | -8.615850e-47 |
| Msa0476770 | Msa0881510 | 0.820803 | 5.654405e-53 | -8.615850e-47 |
| Msa0478080 | Msa0881510 | 0.806166 | 9.387461e-50 | -8.615850e-47 |
| Msa0480260 | Msa0881510 | 0.815871 | 7.404817e-52 | -8.615850e-47 |
| Msa0480540 | Msa0881510 | 0.821889 | 3.175160e-53 | -8.615850e-47 |
| Msa0480550 | Msa0881510 | 0.837285 | 5.687336e-57 | -8.615850e-47 |
| Msa0481770 | Msa0881510 | 0.857764 | 1.306398e-62 | -8.615850e-47 |
| Msa0246140 | Msa0881510 | 0.862553 | 4.671388e-64 | -8.615850e-47 |
| Msa0254640 | Msa0881510 | 0.822353 | 2.478800e-53 | -8.615850e-47 |
| Msa0262360 | Msa0881510 | 0.800077 | 1.706814e-48 | -8.615850e-47 |
| Msa0265480 | Msa0881510 | 0.816234 | 6.143264e-52 | -8.615850e-47 |
| Msa0266220 | Msa0881510 | 0.816207 | 6.229142e-52 | -8.615850e-47 |
| Msa0267700 | Msa0881510 | 0.836454 | 9.267686e-57 | -8.615850e-47 |
| Msa0267900 | Msa0881510 | 0.839501 | 1.525840e-57 | -8.615850e-47 |
| Msa0269710 | Msa0881510 | 0.826963 | 2.032693e-54 | -8.615850e-47 |
| Msa0273070 | Msa0881510 | 0.811775 | 5.915229e-51 | -8.615850e-47 |
| Msa0284730 | Msa0881510 | 0.847857 | 8.868865e-60 | -8.615850e-47 |
| Msa0287680 | Msa0881510 | 0.812756 | 3.612814e-51 | -8.615850e-47 |
| Msa0306310 | Msa0881510 | 0.811544 | 6.638285e-51 | -8.615850e-47 |
| Msa0315120 | Msa0881510 | 0.912271 | 2.357354e-83 | -8.615850e-47 |
| Msa0319680 | Msa0881510 | 0.836804 | 7.551463e-57 | -8.615850e-47 |
| Msa0324810 | Msa0881510 | 0.820418 | 6.933515e-53 | -8.615850e-47 |
| Msa0340370 | Msa0881510 | 0.836699 | 8.029681e-57 | -8.615850e-47 |
| Msa0345050 | Msa0881510 | 0.812944 | 3.285100e-51 | -8.615850e-47 |
| Msa0345890 | Msa0881510 | 0.821427 | 4.060430e-53 | -8.615850e-47 |
| Msa0345980 | Msa0881510 | 0.837779 | 4.250052e-57 | -8.615850e-47 |
| Msa0488580 | Msa0881510 | 0.837794 | 4.211332e-57 | -8.615850e-47 |
| Msa0489070 | Msa0881510 | 0.802331 | 5.902605e-49 | -8.615850e-47 |
| Msa0490100 | Msa0881510 | 0.821517 | 3.872208e-53 | -8.615850e-47 |
| Msa0493870 | Msa0881510 | 0.824541 | 7.632725e-54 | -8.615850e-47 |
| Msa0497680 | Msa0881510 | 0.852321 | 4.984062e-61 | -8.615850e-47 |
| Msa0497690 | Msa0881510 | 0.834393 | 3.075639e-56 | -8.615850e-47 |
| Msa0497860 | Msa0881510 | 0.817221 | 3.689125e-52 | -8.615850e-47 |
| Msa0508160 | Msa0881510 | 0.828389 | 9.240278e-55 | -8.615850e-47 |
| Msa0518190 | Msa0881510 | 0.813203 | 2.882015e-51 | -8.615850e-47 |
| Msa0518490 | Msa0881510 | 0.824934 | 6.165623e-54 | -8.615850e-47 |
| Msa0522140 | Msa0881510 | 0.826193 | 3.102471e-54 | -8.615850e-47 |
| Msa0522170 | Msa0881510 | 0.830693 | 2.543152e-55 | -8.615850e-47 |
| Msa0524260 | Msa0881510 | 0.802189 | 6.312398e-49 | -8.615850e-47 |
| Msa0524370 | Msa0881510 | 0.807815 | 4.203549e-50 | -8.615850e-47 |
| Msa0556270 | Msa0881510 | 0.810565 | 1.082017e-50 | -8.615850e-47 |
| Msa0560280 | Msa0881510 | 0.836977 | 6.819688e-57 | -8.615850e-47 |
| Msa0565180 | Msa0881510 | 0.807664 | 4.525132e-50 | -8.615850e-47 |
| Msa0572730 | Msa0881510 | -0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa0580840 | Msa0881510 | 0.818246 | 2.166843e-52 | -8.615850e-47 |
| Msa0597170 | Msa0881510 | 0.813944 | 1.980495e-51 | -8.615850e-47 |
| Msa0850480 | Msa0881510 | 0.811865 | 5.651896e-51 | -8.615850e-47 |
| Msa0863940 | Msa0881510 | 0.827584 | 1.443286e-54 | -8.615850e-47 |
| Msa0865810 | Msa0881510 | 0.823276 | 1.511572e-53 | -8.615850e-47 |
| Msa0865820 | Msa0881510 | 0.826824 | 2.194020e-54 | -8.615850e-47 |
| Msa0865830 | Msa0881510 | 0.850470 | 1.663241e-60 | -8.615850e-47 |
| Msa0881510 | Msa0906680 | 0.813280 | 2.772910e-51 | -8.615850e-47 |
| Msa0881510 | Msa0921790 | 0.825027 | 5.863645e-54 | -8.615850e-47 |
| Msa0881510 | Msa0960580 | 0.813134 | 2.984410e-51 | -8.615850e-47 |
| Msa0881510 | Msa0975950 | 0.819304 | 1.245899e-52 | -8.615850e-47 |
| Msa0881510 | Msa0982110 | 0.911517 | 5.561548e-83 | -8.615850e-47 |
| Msa0881510 | Msa1001120 | 0.807078 | 6.026579e-50 | -8.615850e-47 |
| Msa0881510 | Msa1003730 | 0.824667 | 7.128649e-54 | -8.615850e-47 |
| Msa0881510 | Msa1003920 | 0.842257 | 2.887883e-58 | -8.615850e-47 |
| Msa0881510 | Msa1026890 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa0881510 | Msa1027910 | 0.845612 | 3.642174e-59 | -8.615850e-47 |
| Msa0881510 | Msa1030210 | 0.829638 | 4.603277e-55 | -8.615850e-47 |
| Msa0881510 | Msa1031780 | 0.857905 | 1.186624e-62 | -8.615850e-47 |
| Msa0881510 | Msa1037360 | 0.803052 | 4.190245e-49 | -8.615850e-47 |
| Msa0881510 | Msa1041250 | 0.847069 | 1.459744e-59 | -8.615850e-47 |
| Msa0881510 | Msa1062070 | 0.820005 | 8.617743e-53 | -8.615850e-47 |
| Msa0881510 | Msa1064240 | 0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa0881510 | Msa1069250 | 0.819493 | 1.128465e-52 | -8.615850e-47 |
| Msa0881510 | Msa1075090 | 0.804839 | 1.781718e-49 | -8.615850e-47 |
| Msa0881510 | Msa1082080 | 0.819204 | 1.313102e-52 | -8.615850e-47 |
| Msa0881510 | Msa1084890 | 0.807380 | 5.199821e-50 | -8.615850e-47 |
| Msa0881510 | Msa1107250 | 0.824519 | 7.723095e-54 | -8.615850e-47 |
| Msa0881510 | Msa1108560 | 0.802280 | 6.045182e-49 | -8.615850e-47 |
| Msa0881510 | Msa1118720 | 0.813894 | 2.031764e-51 | -8.615850e-47 |
| Msa0881510 | Msa1120580 | 0.814666 | 1.371952e-51 | -8.615850e-47 |
| Msa0881510 | Msa1123000 | 0.805925 | 1.055069e-49 | -8.615850e-47 |
| Msa0881510 | Msa1126870 | 0.812149 | 4.901186e-51 | -8.615850e-47 |
| Msa0881510 | Msa1126940 | 0.806915 | 6.522515e-50 | -8.615850e-47 |
| Msa0881510 | Msa1137750 | 0.834435 | 3.002738e-56 | -8.615850e-47 |
| Msa0881510 | Msa1142390 | 0.807767 | 4.303467e-50 | -8.615850e-47 |
| Msa0881510 | Msa1150740 | 0.830187 | 3.382941e-55 | -8.615850e-47 |
| Msa0881510 | Msa1150750 | 0.814443 | 1.536723e-51 | -8.615850e-47 |
| Msa0881510 | Msa1154240 | 0.808113 | 3.632828e-50 | -8.615850e-47 |
| Msa0881510 | Msa1156490 | 0.810674 | 1.024744e-50 | -8.615850e-47 |
| Msa0881510 | Msa1157110 | 0.812729 | 3.661124e-51 | -8.615850e-47 |
| Msa0881510 | Msa1157200 | 0.813133 | 2.987029e-51 | -8.615850e-47 |
| Msa0881510 | Msa1164230 | 0.808385 | 3.178949e-50 | -8.615850e-47 |
| Msa0881510 | Msa1165670 | 0.830504 | 2.829887e-55 | -8.615850e-47 |
| Msa0881510 | Msa1174280 | 0.846261 | 2.426988e-59 | -8.615850e-47 |
| Msa0881510 | Msa1199870 | 0.831416 | 1.690592e-55 | -8.615850e-47 |
| Msa0881510 | Msa1202110 | 0.833157 | 6.266557e-56 | -8.615850e-47 |
| Msa0881510 | Msa1211610 | 0.835928 | 1.261239e-56 | -8.615850e-47 |
| Msa0881510 | Msa1217260 | 0.835625 | 1.504564e-56 | -8.615850e-47 |
| Msa0881510 | Msa1252810 | 0.819305 | 1.245545e-52 | -8.615850e-47 |
| Msa0881510 | Msa1254870 | 0.835013 | 2.148550e-56 | -8.615850e-47 |
| Msa0881510 | Msa1262540 | 0.808851 | 2.527433e-50 | -8.615850e-47 |
| Msa0881510 | Msa1287410 | 0.803893 | 2.804889e-49 | -8.615850e-47 |
| Msa0881510 | Msa1299480 | 0.840805 | 6.967498e-58 | -8.615850e-47 |
| Msa0881510 | Msa1299780 | 0.807422 | 5.095424e-50 | -8.615850e-47 |
| Msa0881510 | Msa1302340 | 0.814314 | 1.641325e-51 | -8.615850e-47 |
| Msa0881510 | Msa1315880 | -0.802154 | 6.417313e-49 | -8.615850e-47 |
| Msa0881510 | Msa1322410 | 0.804564 | 2.033413e-49 | -8.615850e-47 |
| Msa0881510 | Msa1327440 | 0.800040 | 1.736812e-48 | -8.615850e-47 |
| Msa0881510 | Msa1328430 | 0.832311 | 1.016361e-55 | -8.615850e-47 |
| Msa0881510 | Msa1329900 | 0.803313 | 3.700430e-49 | -8.615850e-47 |
| Msa0881510 | Msa1349830 | 0.832389 | 9.720630e-56 | -8.615850e-47 |
| Msa0881510 | Msa1350700 | 0.829865 | 4.052748e-55 | -8.615850e-47 |
| Msa0881510 | Msa1360260 | 0.825536 | 4.442894e-54 | -8.615850e-47 |
| Msa0881510 | Msa1366480 | 0.847337 | 1.232429e-59 | -8.615850e-47 |
| Msa0881510 | Msa1367460 | 0.802367 | 5.802489e-49 | -8.615850e-47 |
| Msa0881510 | Msa1369320 | 0.830902 | 2.261202e-55 | -8.615850e-47 |
| Msa0881510 | Msa1377050 | 0.814588 | 1.427437e-51 | -8.615850e-47 |
| Msa0881510 | Msa1377980 | -0.818996 | 1.464364e-52 | -8.615850e-47 |
| Msa0881510 | Msa1382740 | 0.802994 | 4.308472e-49 | -8.615850e-47 |
| Msa0881510 | Msa1398120 | 0.821060 | 4.936167e-53 | -8.615850e-47 |
| Msa0881510 | Msa1401110 | 0.807609 | 4.648942e-50 | -8.615850e-47 |
| Msa0881510 | Msa1408280 | -0.816894 | 4.370620e-52 | -8.615850e-47 |
| Msa0881510 | Msa1411370 | 0.818964 | 1.489246e-52 | -8.615850e-47 |
| Msa0881510 | Msa1412410 | 0.817003 | 4.130390e-52 | -8.615850e-47 |
| Msa0881510 | Msa1413150 | 0.803431 | 3.498046e-49 | -8.615850e-47 |
| Msa0881510 | Msa1422230 | 0.806653 | 7.408385e-50 | -8.615850e-47 |
| Msa0881510 | Msa1427000 | 0.814242 | 1.701809e-51 | -8.615850e-47 |
| Msa0881510 | Msa1427860 | 0.817939 | 2.542727e-52 | -8.615850e-47 |
| Msa0881510 | Msa1429470 | 0.801433 | 9.025090e-49 | -8.615850e-47 |
| Msa0881510 | Msa1435320 | 0.807550 | 4.786197e-50 | -8.615850e-47 |
| Msa0881510 | Msa1438160 | 0.847258 | 1.295693e-59 | -8.615850e-47 |
| Msa0881510 | Msa1439780 | 0.810962 | 8.880075e-51 | -8.615850e-47 |
| Msa0881510 | Msa1439860 | 0.815661 | 8.245160e-52 | -8.615850e-47 |
| Msa0881510 | Msa1443400 | 0.805071 | 1.593373e-49 | -8.615850e-47 |
| Msa0881510 | Msa1448040 | 0.806224 | 9.128141e-50 | -8.615850e-47 |
| Msa0881510 | Msa1450970 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa0881510 | Msa1453600 | 0.864325 | 1.318858e-64 | -8.615850e-47 |
| Msa0881510 | Msa1453890 | 0.811287 | 7.548123e-51 | -8.615850e-47 |
| Msa0881510 | Msa1459920 | 0.859811 | 3.193841e-63 | -8.615850e-47 |
| Msa0881510 | Msa1459930 | 0.824181 | 9.275103e-54 | -8.615850e-47 |
| Msa0881510 | Msa1464140 | 0.800526 | 1.382720e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881510 | MtrunA17_Chr2g0279401 | 97.403 | 539 | 14 | 0 | 2 | 540 | 3 | 541 | 0.0 | 1085 |
| Msa0881510 | MtrunA17_Chr4g0050151 | 73.646 | 554 | 108 | 6 | 2 | 539 | 3 | 534 | 0.0 | 796 |
| Msa0881510 | MtrunA17_Chr2g0327771 | 66.910 | 411 | 135 | 1 | 112 | 521 | 97 | 507 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881510 | AT5G64300.1 | 75.000 | 504 | 112 | 4 | 20 | 521 | 38 | 529 | 0.0 | 769 |
| Msa0881510 | AT2G22450.1 | 71.220 | 410 | 107 | 4 | 89 | 496 | 74 | 474 | 0.0 | 596 |
| Msa0881510 | AT5G59750.1 | 58.434 | 498 | 198 | 5 | 23 | 517 | 8 | 499 | 0.0 | 580 |
| Msa0881510 | AT5G59750.2 | 54.699 | 532 | 198 | 6 | 23 | 517 | 8 | 533 | 0.0 | 563 |
| Msa0881510 | AT5G59750.3 | 57.045 | 440 | 180 | 5 | 23 | 459 | 8 | 441 | 3.85e-170 | 489 |
Find 166 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTATGGTTTGACTGTTTC+TGG | 0.114584 | 6_1:-28717438 | Msa0881510:CDS |
| CAGGTTTGCTTGTCTTTCTT+TGG | 0.178056 | 6_1:-28717031 | Msa0881510:three_prime_UTR |
| CATTGTATTACCTTGCTTAT+TGG | 0.184117 | 6_1:-28716991 | Msa0881510:three_prime_UTR |
| AGTTAATTTGGTCAAATTAA+AGG | 0.199367 | 6_1:+28721359 | None:intergenic |
| TGCCGAATCTATTCTAATTA+AGG | 0.215332 | 6_1:-28720611 | Msa0881510:CDS |
| AGAGACCAAACGTGTGAAAA+TGG | 0.231254 | 6_1:-28717367 | Msa0881510:CDS |
| TGTCTAACTGGAGACATATT+TGG | 0.294019 | 6_1:-28718148 | Msa0881510:CDS |
| GTTCGAACTAGAAGTTAATT+TGG | 0.298547 | 6_1:+28721347 | None:intergenic |
| AAATGCTGTTGTTGTTGTTT+TGG | 0.309646 | 6_1:+28721409 | None:intergenic |
| ATTGAATAATTTGAAGTGAT+TGG | 0.310596 | 6_1:+28720786 | None:intergenic |
| GAGGGAAAGTGGGGAGGTGC+AGG | 0.311831 | 6_1:+28721514 | None:intergenic |
| CTTGATAATGGCAGCAGAAT+TGG | 0.313759 | 6_1:-28720291 | Msa0881510:CDS |
| GTGAAAATGGGCCACGTCTA+TGG | 0.322087 | 6_1:-28717354 | Msa0881510:CDS |
| TATAATTCACTTTGACAATA+GGG | 0.337928 | 6_1:+28720758 | None:intergenic |
| TTATAATTCACTTTGACAAT+AGG | 0.340396 | 6_1:+28720757 | None:intergenic |
| GCTCCGTGCTTATAACTTAC+AGG | 0.341829 | 6_1:-28718002 | Msa0881510:CDS |
| GCTGATCTTACCATACTTGC+TGG | 0.343338 | 6_1:-28719499 | Msa0881510:CDS |
| CAGGGGTGTCAGCTCAAGAT+AGG | 0.349843 | 6_1:-28719651 | Msa0881510:CDS |
| TCTTACCATACTTGCTGGTT+TGG | 0.362027 | 6_1:-28719494 | Msa0881510:CDS |
| TGGCTCCAAACCAGCAAGTA+TGG | 0.366834 | 6_1:+28719489 | None:intergenic |
| CCTGTTGACTCTAGGGAATA+TGG | 0.376635 | 6_1:-28717935 | Msa0881510:CDS |
| TAGATTGGAGCTTCCTTTGA+TGG | 0.378506 | 6_1:-28720189 | Msa0881510:CDS |
| TTCTTTGGTGTCTGTTACAG+AGG | 0.383488 | 6_1:-28717016 | Msa0881510:three_prime_UTR |
| GTATGATATATGTAGGTAAT+AGG | 0.383546 | 6_1:+28717245 | None:intergenic |
| CTAATTAAGGAACAGTCTAA+TGG | 0.392390 | 6_1:-28720598 | Msa0881510:CDS |
| TTCCTTAATTAGAATAGATT+CGG | 0.393536 | 6_1:+28720609 | None:intergenic |
| TCCTTTGATGGTGGACAGTA+AGG | 0.396490 | 6_1:-28720177 | Msa0881510:CDS |
| TGAAGAAGATCTTGATAGAT+TGG | 0.401462 | 6_1:-28720204 | Msa0881510:CDS |
| ACTATAAAAGCCATAGCTTC+TGG | 0.402814 | 6_1:+28720263 | None:intergenic |
| GAAGAATCAAATGTTGTTGC+TGG | 0.405283 | 6_1:-28717291 | Msa0881510:CDS |
| CAGTCAAACCATAGCCTTTG+AGG | 0.405833 | 6_1:+28717445 | None:intergenic |
| TTTACCAATGATAATCTCAT+TGG | 0.405993 | 6_1:+28720648 | None:intergenic |
| GGACTACAATGACTATGATT+TGG | 0.413404 | 6_1:-28720530 | Msa0881510:CDS |
| ATTTGATTCTTCAACAGTAT+TGG | 0.413785 | 6_1:+28717302 | None:intergenic |
| TTTCAGATACTGAGGGATCT+AGG | 0.416479 | 6_1:-28717516 | Msa0881510:intron |
| CTCTAAGTATCTCTTGTTCT+CGG | 0.416752 | 6_1:+28717386 | None:intergenic |
| GTACACTCAGAGTGTCTAAC+TGG | 0.418207 | 6_1:-28718160 | Msa0881510:CDS |
| CGAATGTCTTCGATGGCCTC+AGG | 0.419623 | 6_1:+28720478 | None:intergenic |
| TGAGCATATTGCAATGGTTA+AGG | 0.423972 | 6_1:-28718324 | Msa0881510:intron |
| GTTAAATCTGCATTGACATC+TGG | 0.433737 | 6_1:-28720703 | Msa0881510:CDS |
| GTGCCTTCTTGAAGAAAATC+AGG | 0.434371 | 6_1:+28717126 | None:intergenic |
| ACAAAATATGTTGGCCTCAA+AGG | 0.435305 | 6_1:-28717459 | Msa0881510:CDS |
| TTTATAGTAAAGCATGGAAC+TGG | 0.441142 | 6_1:-28720248 | Msa0881510:CDS |
| CTGATTTCCACAGTCACATC+TGG | 0.442660 | 6_1:+28718120 | None:intergenic |
| TGGGATTGCCTGTTGACTCT+AGG | 0.445337 | 6_1:-28717943 | Msa0881510:CDS |
| AACACCAATGAGATTATCAT+TGG | 0.453021 | 6_1:-28720652 | Msa0881510:CDS |
| AGCAAACCTGAAAATTGTAT+TGG | 0.457418 | 6_1:+28717044 | None:intergenic |
| CCTGAAAATTGTATTGGTAA+TGG | 0.458617 | 6_1:+28717050 | None:intergenic |
| AAGAAAGAGAGATCAATTAG+TGG | 0.461335 | 6_1:-28718426 | Msa0881510:CDS |
| TTGGCAAATTCGCGGAGCTT+AGG | 0.465644 | 6_1:+28719415 | None:intergenic |
| AAACGAAGGAGACTTGATAA+TGG | 0.466614 | 6_1:-28720303 | Msa0881510:CDS |
| CAACTCCTCATTGGCTTCTA+CGG | 0.466646 | 6_1:+28717964 | None:intergenic |
| TATCTATCGCTGACTTGATA+AGG | 0.467918 | 6_1:-28719372 | Msa0881510:intron |
| CAAAACTATTCATATTCAAA+TGG | 0.469637 | 6_1:-28721325 | Msa0881510:exon |
| GGGATTGCCTGTTGACTCTA+GGG | 0.469934 | 6_1:-28717942 | Msa0881510:CDS |
| AGGCAATCCCAACTCCTCAT+TGG | 0.470707 | 6_1:+28717955 | None:intergenic |
| ATGGCCTTATCTATAATGAT+TGG | 0.471805 | 6_1:+28717069 | None:intergenic |
| CCATATTCCCTAGAGTCAAC+AGG | 0.477453 | 6_1:+28717935 | None:intergenic |
| GAAGGAAGAGGTATTGGATT+GGG | 0.477603 | 6_1:-28718031 | Msa0881510:CDS |
| CGTAGAAGCCAATGAGGAGT+TGG | 0.481823 | 6_1:-28717963 | Msa0881510:CDS |
| GGAACACCGGCATCAGACTC+AGG | 0.482276 | 6_1:-28720577 | Msa0881510:CDS |
| GAGACCAAACGTGTGAAAAT+GGG | 0.484788 | 6_1:-28717366 | Msa0881510:CDS |
| ATTGGTAAAGATCTCGTTGT+TGG | 0.488140 | 6_1:-28720634 | Msa0881510:CDS |
| ATTAATCATGCAGATGGTAG+TGG | 0.489759 | 6_1:-28720348 | Msa0881510:intron |
| ATGGTTTGACTGTTTCTGGT+AGG | 0.495319 | 6_1:-28717434 | Msa0881510:CDS |
| CAGATTGAGGCTGCCGGTAG+GGG | 0.496302 | 6_1:-28718079 | Msa0881510:CDS |
| TATGTTGGCCTCAAAGGCTA+TGG | 0.502238 | 6_1:-28717453 | Msa0881510:CDS |
| GGACATGAAGGAAGAGGTAT+TGG | 0.502608 | 6_1:-28718037 | Msa0881510:CDS |
| GCTAAACATGGTACCACCAC+AGG | 0.505229 | 6_1:-28719670 | Msa0881510:CDS |
| AGTGCCAATCATTATAGATA+AGG | 0.507591 | 6_1:-28717073 | Msa0881510:three_prime_UTR |
| ACAGATTGAGGCTGCCGGTA+GGG | 0.509746 | 6_1:-28718080 | Msa0881510:CDS |
| TCCTTGACGAATGTCTTCGA+TGG | 0.509883 | 6_1:+28720471 | None:intergenic |
| ACGTGATAAGAGTTAACAAC+GGG | 0.514164 | 6_1:+28717409 | None:intergenic |
| AAAGCAGCATTGTGAGTTGA+GGG | 0.515216 | 6_1:+28720730 | None:intergenic |
| ATTGGCAACGCCAGAAGCTA+TGG | 0.516082 | 6_1:-28720273 | Msa0881510:CDS |
| GCTTATAACTTACAGGATGA+TGG | 0.518705 | 6_1:-28717995 | Msa0881510:CDS |
| AATAATTTGAAGTGATTGGA+TGG | 0.519843 | 6_1:+28720790 | None:intergenic |
| CTCTATGAAAGAGGGAAAGT+GGG | 0.520646 | 6_1:+28721504 | None:intergenic |
| TAAAGTCGTCTCTATGAAAG+AGG | 0.521422 | 6_1:+28721495 | None:intergenic |
| TATATCATACACAACAAAAG+AGG | 0.522768 | 6_1:-28717232 | Msa0881510:three_prime_UTR |
| GTAATTTGACAGGGTGACAT+TGG | 0.522822 | 6_1:-28718208 | Msa0881510:intron |
| GTTATAAGTCTCTCTTAGAC+GGG | 0.523033 | 6_1:-28718349 | Msa0881510:CDS |
| TCTCTATGAAAGAGGGAAAG+TGG | 0.528459 | 6_1:+28721503 | None:intergenic |
| AACAATCCAACAAAATATGT+TGG | 0.531217 | 6_1:-28717468 | Msa0881510:CDS |
| GCCTTACTGTCCACCATCAA+AGG | 0.531971 | 6_1:+28720176 | None:intergenic |
| ACTTGCAATGGAACAGATTG+AGG | 0.536805 | 6_1:-28718092 | Msa0881510:CDS |
| GGTGGTGTCTTGAAGAGAGC+TGG | 0.536885 | 6_1:-28719538 | Msa0881510:CDS |
| TGAAGGAAGAGGTATTGGAT+TGG | 0.539165 | 6_1:-28718032 | Msa0881510:CDS |
| GTAGAAGCCAATGAGGAGTT+GGG | 0.539865 | 6_1:-28717962 | Msa0881510:CDS |
| GGTATCCCTGAGTCTGATGC+CGG | 0.539984 | 6_1:+28720571 | None:intergenic |
| AGATAGGGCAACTACAGTAT+TGG | 0.540764 | 6_1:-28719635 | Msa0881510:CDS |
| TGTTATAAGTCTCTCTTAGA+CGG | 0.542065 | 6_1:-28718350 | Msa0881510:CDS |
| AAATCAGCTTGCACTTGCAA+TGG | 0.545459 | 6_1:-28718104 | Msa0881510:CDS |
| TTGTTGTGTATGATATATGT+AGG | 0.545690 | 6_1:+28717238 | None:intergenic |
| GGAATATGGCATAGGCGCAC+AGG | 0.546667 | 6_1:-28717921 | Msa0881510:intron |
| CCTGGTCGGTTGAAATCAGC+CGG | 0.549582 | 6_1:+28719589 | None:intergenic |
| AGTTATAAGCACGGAGCTTG+TGG | 0.552273 | 6_1:+28718008 | None:intergenic |
| TGACAGGGTGACATTGGAGA+TGG | 0.555270 | 6_1:-28718202 | Msa0881510:intron |
| GAGTTGAATCTCTAGATGCA+AGG | 0.556953 | 6_1:+28719611 | None:intergenic |
| ATCTCACACAGAACTGCCAC+TGG | 0.558496 | 6_1:+28719469 | None:intergenic |
| ACTTGCTGGTTTGGAGCCAG+TGG | 0.560907 | 6_1:-28719485 | Msa0881510:CDS |
| TGTAGATGATGACGGTTCCA+TGG | 0.564406 | 6_1:-28719446 | Msa0881510:CDS |
| AAATCTGCATTGACATCTGG+AGG | 0.565898 | 6_1:-28720700 | Msa0881510:CDS |
| AGGGGTGTCAGCTCAAGATA+GGG | 0.566474 | 6_1:-28719650 | Msa0881510:CDS |
| GCAAGAATACCTACAATGTG+GGG | 0.568021 | 6_1:-28718389 | Msa0881510:CDS |
| TTATAACAGTATGATGTGAA+TGG | 0.568571 | 6_1:+28718365 | None:intergenic |
| TTTAGTGGGAAAATATGGCC+TGG | 0.569452 | 6_1:+28719571 | None:intergenic |
| TGCAAGAATACCTACAATGT+GGG | 0.572772 | 6_1:-28718390 | Msa0881510:CDS |
| ATTGGAGCTTCCTTTGATGG+TGG | 0.572830 | 6_1:-28720186 | Msa0881510:CDS |
| ATATACAAGTACTCCCCTAC+CGG | 0.574412 | 6_1:+28718066 | None:intergenic |
| GATTTGGACATCCCTGCAGA+AGG | 0.574646 | 6_1:-28720514 | Msa0881510:CDS |
| TCTCACGCTTGGCAAATTCG+CGG | 0.575937 | 6_1:+28719407 | None:intergenic |
| TGGAGAAGATGTTCTTGTGA+GGG | 0.578569 | 6_1:-28718182 | Msa0881510:CDS |
| CGGGATTGAGCATATTGCAA+TGG | 0.579779 | 6_1:-28718330 | Msa0881510:CDS |
| TACCGCATTCACTGTGACCG+TGG | 0.580033 | 6_1:-28720135 | Msa0881510:intron |
| CCGGCTGATTTCAACCGACC+AGG | 0.580455 | 6_1:-28719589 | Msa0881510:CDS |
| CACCTCTCCTCTCTTGTCCA+CGG | 0.580545 | 6_1:-28721272 | Msa0881510:intron |
| GAATGTCTTCGATGGCCTCA+GGG | 0.580551 | 6_1:+28720479 | None:intergenic |
| AAAAGCAGCATTGTGAGTTG+AGG | 0.581051 | 6_1:+28720729 | None:intergenic |
| ATCTGCATTGACATCTGGAG+GGG | 0.586176 | 6_1:-28720698 | Msa0881510:CDS |
| GAAGTTACCGTGGACAAGAG+AGG | 0.590332 | 6_1:+28721265 | None:intergenic |
| CGAAGACATTCGTCAAGGAA+AGG | 0.592026 | 6_1:-28720467 | Msa0881510:intron |
| GTGGGAAAATATGGCCTGGT+CGG | 0.598146 | 6_1:+28719575 | None:intergenic |
| GTATATCTACGCGGACATGA+AGG | 0.601774 | 6_1:-28718049 | Msa0881510:CDS |
| ATGGAACAGATTGAGGCTGC+CGG | 0.604204 | 6_1:-28718085 | Msa0881510:CDS |
| TTCCCACTAAAATACAGGGA+TGG | 0.605130 | 6_1:-28719559 | Msa0881510:CDS |
| AATGGGCCACGTCTATGGCA+TGG | 0.606179 | 6_1:-28717349 | Msa0881510:CDS |
| CTACGCGGACATGAAGGAAG+AGG | 0.608496 | 6_1:-28718043 | Msa0881510:CDS |
| ATGGAACTTAACAACGGCAA+TGG | 0.608599 | 6_1:-28717330 | Msa0881510:CDS |
| CTGCAAGAATACCTACAATG+TGG | 0.611887 | 6_1:-28718391 | Msa0881510:CDS |
| ATGGAGAAGATGTTCTTGTG+AGG | 0.618966 | 6_1:-28718183 | Msa0881510:CDS |
| AGTTGAATCTCTAGATGCAA+GGG | 0.619240 | 6_1:+28719612 | None:intergenic |
| GAGCTTAGGTAATCTAGCCA+TGG | 0.622161 | 6_1:+28719429 | None:intergenic |
| CTAAACATGGTACCACCACA+GGG | 0.625510 | 6_1:-28719669 | Msa0881510:CDS |
| GACTCTAGGGAATATGGCAT+AGG | 0.625669 | 6_1:-28717929 | Msa0881510:CDS |
| TGCATCTAGAGATTCAACTC+CGG | 0.626692 | 6_1:-28719608 | Msa0881510:CDS |
| CCACTAAAATACAGGGATGG+TGG | 0.628481 | 6_1:-28719556 | Msa0881510:CDS |
| GAACACCGGCATCAGACTCA+GGG | 0.628940 | 6_1:-28720576 | Msa0881510:CDS |
| AAAGTCGTCTCTATGAAAGA+GGG | 0.633155 | 6_1:+28721496 | None:intergenic |
| AACAGATTGAGGCTGCCGGT+AGG | 0.636736 | 6_1:-28718081 | Msa0881510:CDS |
| TTGAGCTGACACCCCTGTGG+TGG | 0.636935 | 6_1:+28719657 | None:intergenic |
| GCTACAATAACTCATGTCAG+TGG | 0.640830 | 6_1:-28716936 | Msa0881510:three_prime_UTR |
| AGATTATATTCCAATAAGCA+AGG | 0.641533 | 6_1:+28716981 | None:intergenic |
| AATCTGCATTGACATCTGGA+GGG | 0.646026 | 6_1:-28720699 | Msa0881510:CDS |
| TATTTGCAGGATGCTAAACA+TGG | 0.653209 | 6_1:-28719682 | Msa0881510:intron |
| CATCCTGTAAGTTATAAGCA+CGG | 0.654892 | 6_1:+28717999 | None:intergenic |
| TCTGCATTGACATCTGGAGG+GGG | 0.656751 | 6_1:-28720697 | Msa0881510:CDS |
| TACCACGGTCACAGTGAATG+CGG | 0.656958 | 6_1:+28720133 | None:intergenic |
| TACCGTGGACAAGAGAGGAG+AGG | 0.658759 | 6_1:+28721270 | None:intergenic |
| TGTGAGATTGTAGATGATGA+CGG | 0.659733 | 6_1:-28719454 | Msa0881510:CDS |
| GCCATCGAAGACATTCGTCA+AGG | 0.667650 | 6_1:-28720472 | Msa0881510:CDS |
| GGAACAGTCTAATGGAACAC+CGG | 0.671680 | 6_1:-28720590 | Msa0881510:CDS |
| GATGAAGATAGAGAAAACGA+AGG | 0.672267 | 6_1:-28720317 | Msa0881510:CDS |
| CGATACCGTAGAAGCCAATG+AGG | 0.672536 | 6_1:-28717969 | Msa0881510:CDS |
| CAAGAATACCTACAATGTGG+GGG | 0.672554 | 6_1:-28718388 | Msa0881510:CDS |
| ATGAAAGAGGGAAAGTGGGG+AGG | 0.673501 | 6_1:+28721508 | None:intergenic |
| TGGACAAGAGAGGAGAGGTG+AGG | 0.674160 | 6_1:+28721275 | None:intergenic |
| TAAGTTCCATGCCATAGACG+TGG | 0.678127 | 6_1:+28717343 | None:intergenic |
| TCTATGAAAGAGGGAAAGTG+GGG | 0.691721 | 6_1:+28721505 | None:intergenic |
| ATCTTGAGCTGACACCCCTG+TGG | 0.696438 | 6_1:+28719654 | None:intergenic |
| GACGTGATAAGAGTTAACAA+CGG | 0.711055 | 6_1:+28717408 | None:intergenic |
| TATGGCATGGAACTTAACAA+CGG | 0.722153 | 6_1:-28717336 | Msa0881510:CDS |
| GGATCTGCCAGATGTGACTG+TGG | 0.728800 | 6_1:-28718127 | Msa0881510:CDS |
| CAGGAAGTAACGAAGAAACG+CGG | 0.760732 | 6_1:+28721533 | None:intergenic |
| GGAGTACTTGTATATCTACG+CGG | 0.793030 | 6_1:-28718058 | Msa0881510:CDS |
| TAAACATGGTACCACCACAG+GGG | 0.794302 | 6_1:-28719668 | Msa0881510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTGTTGAAATTAAA+TGG | - | chr6_1:28718647-28718666 | Msa0881510:intron | 10.0% |
| !! | TCTTAATATTTGCATATTTA+TGG | - | chr6_1:28719155-28719174 | Msa0881510:intron | 15.0% |
| !!! | AATGGAATTTTTATATTTTC+TGG | - | chr6_1:28719422-28719441 | Msa0881510:CDS | 15.0% |
| !! | TTATTGTAAAAAATCCTTTA+TGG | + | chr6_1:28720599-28720618 | None:intergenic | 15.0% |
| !!! | TGTTTATTAAAGAGATATTT+TGG | - | chr6_1:28720709-28720728 | Msa0881510:CDS | 15.0% |
| !!! | ATTAATTTATTGTCACTTTT+TGG | + | chr6_1:28721289-28721308 | None:intergenic | 15.0% |
| !!! | AGTTAATTTGGTCAAATTAA+AGG | + | chr6_1:28717112-28717131 | None:intergenic | 20.0% |
| !! | CAAAACTATTCATATTCAAA+TGG | - | chr6_1:28717143-28717162 | Msa0881510:three_prime_UTR | 20.0% |
| !! | TATTGTATTGAGAAAAAAAG+TGG | + | chr6_1:28717294-28717313 | None:intergenic | 20.0% |
| !!! | ATTGAATAATTTGAAGTGAT+TGG | + | chr6_1:28717685-28717704 | None:intergenic | 20.0% |
| !! | TATAATTCACTTTGACAATA+GGG | + | chr6_1:28717713-28717732 | None:intergenic | 20.0% |
| !! | TTATAATTCACTTTGACAAT+AGG | + | chr6_1:28717714-28717733 | None:intergenic | 20.0% |
| !! | TTCCTTAATTAGAATAGATT+CGG | + | chr6_1:28717862-28717881 | None:intergenic | 20.0% |
| !!! | ATTAAATGGTTTTCAAATCA+AGG | - | chr6_1:28718661-28718680 | Msa0881510:intron | 20.0% |
| !!! | ACAATTTAAAATGTATTTGC+AGG | - | chr6_1:28718773-28718792 | Msa0881510:intron | 20.0% |
| !! | TTGATATCTCACAATATATA+TGG | - | chr6_1:28719255-28719274 | Msa0881510:intron | 20.0% |
| !! | TTAAAAAAACTCCTATTCAA+TGG | - | chr6_1:28719465-28719484 | Msa0881510:CDS | 20.0% |
| !! | AATATATTAGAATTGCTCAA+TGG | - | chr6_1:28720571-28720590 | Msa0881510:CDS | 20.0% |
| !!! | TTTTACAATAACATTTTGAG+AGG | - | chr6_1:28720608-28720627 | Msa0881510:CDS | 20.0% |
| !!! | GTTTTAACTGTTTAAATACA+TGG | - | chr6_1:28720867-28720886 | Msa0881510:intron | 20.0% |
| ! | TGGATCATGAAAAGATATAT+GGG | + | chr6_1:28717274-28717293 | None:intergenic | 25.0% |
| ! | TTATCATATGATATGATACG+TGG | - | chr6_1:28717317-28717336 | Msa0881510:CDS | 25.0% |
| !!! | AAATCTGTTATGTTTTGAAC+TGG | - | chr6_1:28717552-28717571 | Msa0881510:intron | 25.0% |
| !! | AATTTTCTGTCACTCTTTTA+AGG | - | chr6_1:28717618-28717637 | Msa0881510:intron | 25.0% |
| ! | TGAAAAACAGATCAAATCAA+AGG | + | chr6_1:28717651-28717670 | None:intergenic | 25.0% |
| !!! | TTTGATCTGTTTTTCAATGT+AGG | - | chr6_1:28717655-28717674 | Msa0881510:intron | 25.0% |
| !! | AATAATTTGAAGTGATTGGA+TGG | + | chr6_1:28717681-28717700 | None:intergenic | 25.0% |
| !!! | ATAATCTCATTGGTGTTTTT+CGG | + | chr6_1:28717813-28717832 | None:intergenic | 25.0% |
| ! | TTTACCAATGATAATCTCAT+TGG | + | chr6_1:28717823-28717842 | None:intergenic | 25.0% |
| ! | AACAAAATCTATCATGATCT+TGG | + | chr6_1:28718099-28718118 | None:intergenic | 25.0% |
| ! | TTGTTTATTAATCATGCAGA+TGG | - | chr6_1:28718114-28718133 | Msa0881510:CDS | 25.0% |
| ! | TTACAATATCTCTTTGACTA+AGG | - | chr6_1:28718400-28718419 | Msa0881510:CDS | 25.0% |
| ! | ACTAAGGAAATGTTGTTAAA+TGG | - | chr6_1:28718416-28718435 | Msa0881510:CDS | 25.0% |
| ! | TAGAAAATGTTGTCAATAAG+AGG | - | chr6_1:28718491-28718510 | Msa0881510:intron | 25.0% |
| ! | TTAATCTGTTATGCTATTGA+AGG | - | chr6_1:28718697-28718716 | Msa0881510:intron | 25.0% |
| !!! | AAGGAATTTTGTTTTGATGT+GGG | - | chr6_1:28718716-28718735 | Msa0881510:intron | 25.0% |
| !!! | TGTATTTTAGTGGGAAAATA+TGG | + | chr6_1:28718905-28718924 | None:intergenic | 25.0% |
| !! | ATATTTTCCCACTAAAATAC+AGG | - | chr6_1:28718904-28718923 | Msa0881510:intron | 25.0% |
| !! | TATTTTCCCACTAAAATACA+GGG | - | chr6_1:28718905-28718924 | Msa0881510:intron | 25.0% |
| ! | ATTTAGTATGTTGCATATGT+TGG | + | chr6_1:28719232-28719251 | None:intergenic | 25.0% |
| ! | ACTAAATGATTGAACTAACT+CGG | - | chr6_1:28719290-28719309 | Msa0881510:intron | 25.0% |
| ! | TATAAAAATTCCATTCAGTG+AGG | + | chr6_1:28719417-28719436 | None:intergenic | 25.0% |
| !!! | TTAACTTTAGGATCCAAATA+GGG | - | chr6_1:28719523-28719542 | Msa0881510:CDS | 25.0% |
| !! | ATAAAATGAAGGAACACTTT+TGG | - | chr6_1:28719549-28719568 | Msa0881510:CDS | 25.0% |
| !! | TACTGAACTTACTATTTTGT+TGG | + | chr6_1:28719681-28719700 | None:intergenic | 25.0% |
| !!! | TTTATAAGTCTCGTTTTTCA+AGG | - | chr6_1:28719940-28719959 | Msa0881510:intron | 25.0% |
| ! | ACAAGGAGATTAAAACTTAT+TGG | - | chr6_1:28720005-28720024 | Msa0881510:intron | 25.0% |
| ! | TTATAACAGTATGATGTGAA+TGG | + | chr6_1:28720106-28720125 | None:intergenic | 25.0% |
| ! | TTGACTATTTGTAATTTGAC+AGG | - | chr6_1:28720250-28720269 | Msa0881510:CDS | 25.0% |
| ! | TGACTATTTGTAATTTGACA+GGG | - | chr6_1:28720251-28720270 | Msa0881510:CDS | 25.0% |
| ! | ACAATGTCAATTTAGTCATT+CGG | + | chr6_1:28720735-28720754 | None:intergenic | 25.0% |
| ! | ATTGACATTGTTCGATTAAA+TGG | - | chr6_1:28720744-28720763 | Msa0881510:CDS | 25.0% |
| ! | AACAATCCAACAAAATATGT+TGG | - | chr6_1:28721000-28721019 | Msa0881510:intron | 25.0% |
| ! | ATTTGATTCTTCAACAGTAT+TGG | + | chr6_1:28721169-28721188 | None:intergenic | 25.0% |
| ! | GTATGATATATGTAGGTAAT+AGG | + | chr6_1:28721226-28721245 | None:intergenic | 25.0% |
| ! | TTGTTGTGTATGATATATGT+AGG | + | chr6_1:28721233-28721252 | None:intergenic | 25.0% |
| ! | TATATCATACACAACAAAAG+AGG | - | chr6_1:28721236-28721255 | Msa0881510:intron | 25.0% |
| ! | AGATTATATTCCAATAAGCA+AGG | + | chr6_1:28721490-28721509 | None:intergenic | 25.0% |
| ! | GCAAAAATAATGAAGAAACT+TGG | + | chr6_1:28721514-28721533 | None:intergenic | 25.0% |
| !!! | AAATGCTGTTGTTGTTGTTT+TGG | + | chr6_1:28717062-28717081 | None:intergenic | 30.0% |
| GTTCGAACTAGAAGTTAATT+TGG | + | chr6_1:28717124-28717143 | None:intergenic | 30.0% | |
| TGGTTTGATGAGATTAATAG+TGG | + | chr6_1:28717246-28717265 | None:intergenic | 30.0% | |
| GAAAAGATATATGGGGAAAA+TGG | + | chr6_1:28717266-28717285 | None:intergenic | 30.0% | |
| GGATCATGAAAAGATATATG+GGG | + | chr6_1:28717273-28717292 | None:intergenic | 30.0% | |
| GTGGATCATGAAAAGATATA+TGG | + | chr6_1:28717275-28717294 | None:intergenic | 30.0% | |
| !! | GATCAGAAGTATCAGTAATA+TGG | + | chr6_1:28717442-28717461 | None:intergenic | 30.0% |
| TTGAATGTAATCACATGTGT+CGG | + | chr6_1:28717501-28717520 | None:intergenic | 30.0% | |
| !!! | CTCGTTGCAGTTTTAAATTT+TGG | - | chr6_1:28717595-28717614 | Msa0881510:intron | 30.0% |
| AACACCAATGAGATTATCAT+TGG | - | chr6_1:28717816-28717835 | Msa0881510:intron | 30.0% | |
| TGCCGAATCTATTCTAATTA+AGG | - | chr6_1:28717857-28717876 | Msa0881510:intron | 30.0% | |
| CTAATTAAGGAACAGTCTAA+TGG | - | chr6_1:28717870-28717889 | Msa0881510:intron | 30.0% | |
| ! | ATGGCTTTTATAGTAAAGCA+TGG | - | chr6_1:28718214-28718233 | Msa0881510:intron | 30.0% |
| TTTATAGTAAAGCATGGAAC+TGG | - | chr6_1:28718220-28718239 | Msa0881510:intron | 30.0% | |
| TGAAGAAGATCTTGATAGAT+TGG | - | chr6_1:28718264-28718283 | Msa0881510:intron | 30.0% | |
| ACGAATAGTAATACATACCA+CGG | + | chr6_1:28718353-28718372 | None:intergenic | 30.0% | |
| TAATTGCATCTATACACATC+TGG | - | chr6_1:28718372-28718391 | Msa0881510:CDS | 30.0% | |
| AAGGAAATGTTGTTAAATGG+CGG | - | chr6_1:28718419-28718438 | Msa0881510:CDS | 30.0% | |
| !!! | GAAGGAATTTTGTTTTGATG+TGG | - | chr6_1:28718715-28718734 | Msa0881510:intron | 30.0% |
| !!! | ATTTTGTTTTGATGTGGGTT+AGG | - | chr6_1:28718721-28718740 | Msa0881510:intron | 30.0% |
| ! | AATTTTCAAATTCTCACGCT+TGG | + | chr6_1:28719075-28719094 | None:intergenic | 30.0% |
| AATCATTTAGTCACGATTCA+AGG | + | chr6_1:28719281-28719300 | None:intergenic | 30.0% | |
| TTTGTTAAAACCTCACTGAA+TGG | - | chr6_1:28719404-28719423 | Msa0881510:CDS | 30.0% | |
| TTCTATGAGAACCATTGAAT+AGG | + | chr6_1:28719479-28719498 | None:intergenic | 30.0% | |
| TCAATGGTTCTCATAGAAAA+TGG | - | chr6_1:28719481-28719500 | Msa0881510:CDS | 30.0% | |
| CAATGGTTCTCATAGAAAAT+GGG | - | chr6_1:28719482-28719501 | Msa0881510:CDS | 30.0% | |
| AATGGTTCTCATAGAAAATG+GGG | - | chr6_1:28719483-28719502 | Msa0881510:CDS | 30.0% | |
| GAGAGAAAGATGTTAACTTT+AGG | - | chr6_1:28719511-28719530 | Msa0881510:CDS | 30.0% | |
| !! | GTTAACTTTAGGATCCAAAT+AGG | - | chr6_1:28719522-28719541 | Msa0881510:CDS | 30.0% |
| ! | TTCATTTTATCCACCCTATT+TGG | + | chr6_1:28719539-28719558 | None:intergenic | 30.0% |
| AAATAGGGTGGATAAAATGA+AGG | - | chr6_1:28719538-28719557 | Msa0881510:CDS | 30.0% | |
| ACTATAGTAATGTATCACTC+AGG | - | chr6_1:28719580-28719599 | Msa0881510:CDS | 30.0% | |
| AAGTCATTAGAGCGAAAATT+GGG | - | chr6_1:28719769-28719788 | Msa0881510:intron | 30.0% | |
| ! | GATACTTCTTGTTGCTTATT+TGG | - | chr6_1:28719977-28719996 | Msa0881510:intron | 30.0% |
| TTGCTTATTTGGTCATAACA+AGG | - | chr6_1:28719988-28720007 | Msa0881510:intron | 30.0% | |
| AAGAAAGAGAGATCAATTAG+TGG | - | chr6_1:28720042-28720061 | Msa0881510:intron | 30.0% | |
| TGTTATAAGTCTCTCTTAGA+CGG | - | chr6_1:28720118-28720137 | Msa0881510:intron | 30.0% | |
| TGTATATAATACAGTTTCCG+TGG | - | chr6_1:28720180-28720199 | Msa0881510:CDS | 30.0% | |
| ! | CACTAAGTGTTGCAAAATAT+AGG | + | chr6_1:28720211-28720230 | None:intergenic | 30.0% |
| ! | TATTTTGCAACACTTAGTGA+TGG | - | chr6_1:28720212-28720231 | Msa0881510:CDS | 30.0% |
| ! | ATTTTGCAACACTTAGTGAT+GGG | - | chr6_1:28720213-28720232 | Msa0881510:CDS | 30.0% |
| TTCAGTCATTGAAACTGTAA+GGG | + | chr6_1:28720810-28720829 | None:intergenic | 30.0% | |
| TTTCAGTCATTGAAACTGTA+AGG | + | chr6_1:28720811-28720830 | None:intergenic | 30.0% | |
| TAATAGGTAAAAAGAAGGCA+TGG | + | chr6_1:28721210-28721229 | None:intergenic | 30.0% | |
| GTAGGTAATAGGTAAAAAGA+AGG | + | chr6_1:28721215-28721234 | None:intergenic | 30.0% | |
| AGTGCCAATCATTATAGATA+AGG | - | chr6_1:28721395-28721414 | Msa0881510:five_prime_UTR | 30.0% | |
| !! | ATGGCCTTATCTATAATGAT+TGG | + | chr6_1:28721402-28721421 | None:intergenic | 30.0% |
| ! | CCTGAAAATTGTATTGGTAA+TGG | + | chr6_1:28721421-28721440 | None:intergenic | 30.0% |
| ! | CCATTACCAATACAATTTTC+AGG | - | chr6_1:28721418-28721437 | Msa0881510:five_prime_UTR | 30.0% |
| AGCAAACCTGAAAATTGTAT+TGG | + | chr6_1:28721427-28721446 | None:intergenic | 30.0% | |
| CATTGTATTACCTTGCTTAT+TGG | - | chr6_1:28721477-28721496 | Msa0881510:five_prime_UTR | 30.0% | |
| AAAGTCGTCTCTATGAAAGA+GGG | + | chr6_1:28716975-28716994 | None:intergenic | 35.0% | |
| TAAAGTCGTCTCTATGAAAG+AGG | + | chr6_1:28716976-28716995 | None:intergenic | 35.0% | |
| !! | ATAGTGGATCATGAAAAGAG+AGG | + | chr6_1:28717230-28717249 | None:intergenic | 35.0% |
| !!! | TACGTGGTTTTATCCATTGT+TGG | - | chr6_1:28717333-28717352 | Msa0881510:CDS | 35.0% |
| ! | GTTAAATCTGCATTGACATC+TGG | - | chr6_1:28717765-28717784 | Msa0881510:intron | 35.0% |
| !! | TGTTTTTCGGATAGGAAAGT+AGG | + | chr6_1:28717800-28717819 | None:intergenic | 35.0% |
| ATTGGTAAAGATCTCGTTGT+TGG | - | chr6_1:28717834-28717853 | Msa0881510:intron | 35.0% | |
| GGACTACAATGACTATGATT+TGG | - | chr6_1:28717938-28717957 | Msa0881510:CDS | 35.0% | |
| TAGAAGAAAAACCTTCTGCA+GGG | + | chr6_1:28717968-28717987 | None:intergenic | 35.0% | |
| ATAGAAGAAAAACCTTCTGC+AGG | + | chr6_1:28717969-28717988 | None:intergenic | 35.0% | |
| ATTAATCATGCAGATGGTAG+TGG | - | chr6_1:28718120-28718139 | Msa0881510:CDS | 35.0% | |
| GATGAAGATAGAGAAAACGA+AGG | - | chr6_1:28718151-28718170 | Msa0881510:CDS | 35.0% | |
| AAACGAAGGAGACTTGATAA+TGG | - | chr6_1:28718165-28718184 | Msa0881510:CDS | 35.0% | |
| ACTATAAAAGCCATAGCTTC+TGG | + | chr6_1:28718208-28718227 | None:intergenic | 35.0% | |
| TATTTGCAGGATGCTAAACA+TGG | - | chr6_1:28718786-28718805 | Msa0881510:intron | 35.0% | |
| AGTTGAATCTCTAGATGCAA+GGG | + | chr6_1:28718859-28718878 | None:intergenic | 35.0% | |
| TGTGAGATTGTAGATGATGA+CGG | - | chr6_1:28719014-28719033 | Msa0881510:intron | 35.0% | |
| !! | TATCTATCGCTGACTTGATA+AGG | - | chr6_1:28719096-28719115 | Msa0881510:intron | 35.0% |
| TTGAACTAACTCGGACTTTA+TGG | - | chr6_1:28719299-28719318 | Msa0881510:intron | 35.0% | |
| ! | GTTCTTAATTTTGTCTGACG+AGG | - | chr6_1:28719321-28719340 | Msa0881510:intron | 35.0% |
| TGTTGTATGAGACTGTATGT+TGG | - | chr6_1:28719644-28719663 | Msa0881510:CDS | 35.0% | |
| ACACAAGACAAGACATAATC+AGG | - | chr6_1:28719742-28719761 | Msa0881510:intron | 35.0% | |
| CAAGTCATTAGAGCGAAAAT+TGG | - | chr6_1:28719768-28719787 | Msa0881510:intron | 35.0% | |
| AGTCATTAGAGCGAAAATTG+GGG | - | chr6_1:28719770-28719789 | Msa0881510:intron | 35.0% | |
| !! | TTTTCAAGGTTTTTGCTGTC+TGG | - | chr6_1:28719954-28719973 | Msa0881510:intron | 35.0% |
| !! | TTTCAAGGTTTTTGCTGTCT+GGG | - | chr6_1:28719955-28719974 | Msa0881510:intron | 35.0% |
| TGCAAGAATACCTACAATGT+GGG | - | chr6_1:28720078-28720097 | Msa0881510:intron | 35.0% | |
| GTTATAAGTCTCTCTTAGAC+GGG | - | chr6_1:28720119-28720138 | Msa0881510:intron | 35.0% | |
| TGAGCATATTGCAATGGTTA+AGG | - | chr6_1:28720144-28720163 | Msa0881510:CDS | 35.0% | |
| GCAAAATATAGGTAGTTCCA+CGG | + | chr6_1:28720200-28720219 | None:intergenic | 35.0% | |
| !!! | TTAGTGATGGGTTTTTGACA+AGG | - | chr6_1:28720225-28720244 | Msa0881510:CDS | 35.0% |
| TGTCTAACTGGAGACATATT+TGG | - | chr6_1:28720320-28720339 | Msa0881510:CDS | 35.0% | |
| CATCCTGTAAGTTATAAGCA+CGG | + | chr6_1:28720472-28720491 | None:intergenic | 35.0% | |
| GCTTATAACTTACAGGATGA+TGG | - | chr6_1:28720473-28720492 | Msa0881510:CDS | 35.0% | |
| ATTGCTCAATGGTTCCATAA+AGG | - | chr6_1:28720582-28720601 | Msa0881510:CDS | 35.0% | |
| ATGGAAAGTTATCACAGACA+TGG | - | chr6_1:28720904-28720923 | Msa0881510:intron | 35.0% | |
| GAAAAAGTAGCAACATTCCA+AGG | + | chr6_1:28720936-28720955 | None:intergenic | 35.0% | |
| !!! | TGCTACTTTTTCAGATACTG+AGG | - | chr6_1:28720944-28720963 | Msa0881510:intron | 35.0% |
| !!! | GCTACTTTTTCAGATACTGA+GGG | - | chr6_1:28720945-28720964 | Msa0881510:intron | 35.0% |
| ! | TTGAGGCCAACATATTTTGT+TGG | + | chr6_1:28721009-28721028 | None:intergenic | 35.0% |
| ! | ACAAAATATGTTGGCCTCAA+AGG | - | chr6_1:28721009-28721028 | Msa0881510:intron | 35.0% |
| ACGTGATAAGAGTTAACAAC+GGG | + | chr6_1:28721062-28721081 | None:intergenic | 35.0% | |
| GACGTGATAAGAGTTAACAA+CGG | + | chr6_1:28721063-28721082 | None:intergenic | 35.0% | |
| CTCTAAGTATCTCTTGTTCT+CGG | + | chr6_1:28721085-28721104 | None:intergenic | 35.0% | |
| TATGGCATGGAACTTAACAA+CGG | - | chr6_1:28721132-28721151 | Msa0881510:intron | 35.0% | |
| GAAGAATCAAATGTTGTTGC+TGG | - | chr6_1:28721177-28721196 | Msa0881510:intron | 35.0% | |
| ! | TTGCCTGATTTTCTTCAAGA+AGG | - | chr6_1:28721339-28721358 | Msa0881510:five_prime_UTR | 35.0% |
| TCTATGAAAGAGGGAAAGTG+GGG | + | chr6_1:28716966-28716985 | None:intergenic | 40.0% | |
| CTCTATGAAAGAGGGAAAGT+GGG | + | chr6_1:28716967-28716986 | None:intergenic | 40.0% | |
| TCTCTATGAAAGAGGGAAAG+TGG | + | chr6_1:28716968-28716987 | None:intergenic | 40.0% | |
| ! | AAAGCAGCATTGTGAGTTGA+GGG | + | chr6_1:28717741-28717760 | None:intergenic | 40.0% |
| AAAAGCAGCATTGTGAGTTG+AGG | + | chr6_1:28717742-28717761 | None:intergenic | 40.0% | |
| ! | AAATCTGCATTGACATCTGG+AGG | - | chr6_1:28717768-28717787 | Msa0881510:intron | 40.0% |
| ! | AATCTGCATTGACATCTGGA+GGG | - | chr6_1:28717769-28717788 | Msa0881510:intron | 40.0% |
| !! | CTCATTGGTGTTTTTCGGAT+AGG | + | chr6_1:28717808-28717827 | None:intergenic | 40.0% |
| !!! | ACCAAGCACTTTTTTCTCTG+CGG | - | chr6_1:28717917-28717936 | Msa0881510:intron | 40.0% |
| ! | AGGTTTTTCTTCTATCCCTG+AGG | - | chr6_1:28717974-28717993 | Msa0881510:CDS | 40.0% |
| !! | CTTGATAATGGCAGCAGAAT+TGG | - | chr6_1:28718177-28718196 | Msa0881510:CDS | 40.0% |
| TAGATTGGAGCTTCCTTTGA+TGG | - | chr6_1:28718279-28718298 | Msa0881510:intron | 40.0% | |
| CAATCGACAACATTGGACTA+AGG | - | chr6_1:28718584-28718603 | Msa0881510:intron | 40.0% | |
| !! | GTGGGTTAGGCATTTATTGA+TGG | - | chr6_1:28718734-28718753 | Msa0881510:intron | 40.0% |
| AGATAGGGCAACTACAGTAT+TGG | - | chr6_1:28718833-28718852 | Msa0881510:intron | 40.0% | |
| GAGTTGAATCTCTAGATGCA+AGG | + | chr6_1:28718860-28718879 | None:intergenic | 40.0% | |
| TGCATCTAGAGATTCAACTC+CGG | - | chr6_1:28718860-28718879 | Msa0881510:intron | 40.0% | |
| TTTAGTGGGAAAATATGGCC+TGG | + | chr6_1:28718900-28718919 | None:intergenic | 40.0% | |
| TTCCCACTAAAATACAGGGA+TGG | - | chr6_1:28718909-28718928 | Msa0881510:intron | 40.0% | |
| !!! | CACCATCCCTGTATTTTAGT+GGG | + | chr6_1:28718914-28718933 | None:intergenic | 40.0% |
| ! | TCTTACCATACTTGCTGGTT+TGG | - | chr6_1:28718974-28718993 | Msa0881510:intron | 40.0% |
| !! | ATCGCTGACTTGATAAGGTA+TGG | - | chr6_1:28719101-28719120 | Msa0881510:intron | 40.0% |
| !! | ACTTTAGGATCCAAATAGGG+TGG | - | chr6_1:28719526-28719545 | Msa0881510:CDS | 40.0% |
| ATGTATCACTCAGGCTTAGA+AGG | - | chr6_1:28719589-28719608 | Msa0881510:CDS | 40.0% | |
| ACAGTCTCATACAACACTGT+AGG | + | chr6_1:28719640-28719659 | None:intergenic | 40.0% | |
| AGTTCAGTATTCCAGAGATG+AGG | - | chr6_1:28719692-28719711 | Msa0881510:intron | 40.0% | |
| ! | CTCTACCATTTTCCTACAGT+GGG | + | chr6_1:28719801-28719820 | None:intergenic | 40.0% |
| ! | ACTCTACCATTTTCCTACAG+TGG | + | chr6_1:28719802-28719821 | None:intergenic | 40.0% |
| GTACTTAAACCACATAAGCC+AGG | + | chr6_1:28719825-28719844 | None:intergenic | 40.0% | |
| !! | CATTCATAGAAGCACTGACT+AGG | - | chr6_1:28719855-28719874 | Msa0881510:intron | 40.0% |
| GAATTTGACTACCCTGTATC+TGG | + | chr6_1:28719889-28719908 | None:intergenic | 40.0% | |
| CTGCAAGAATACCTACAATG+TGG | - | chr6_1:28720077-28720096 | Msa0881510:intron | 40.0% | |
| GCAAGAATACCTACAATGTG+GGG | - | chr6_1:28720079-28720098 | Msa0881510:intron | 40.0% | |
| CAAGAATACCTACAATGTGG+GGG | - | chr6_1:28720080-28720099 | Msa0881510:intron | 40.0% | |
| GTAATTTGACAGGGTGACAT+TGG | - | chr6_1:28720260-28720279 | Msa0881510:CDS | 40.0% | |
| ATGGAGAAGATGTTCTTGTG+AGG | - | chr6_1:28720285-28720304 | Msa0881510:CDS | 40.0% | |
| TGGAGAAGATGTTCTTGTGA+GGG | - | chr6_1:28720286-28720305 | Msa0881510:CDS | 40.0% | |
| AAATCAGCTTGCACTTGCAA+TGG | - | chr6_1:28720364-28720383 | Msa0881510:intron | 40.0% | |
| ACTTGCAATGGAACAGATTG+AGG | - | chr6_1:28720376-28720395 | Msa0881510:intron | 40.0% | |
| ATATACAAGTACTCCCCTAC+CGG | + | chr6_1:28720405-28720424 | None:intergenic | 40.0% | |
| ! | GGAGTACTTGTATATCTACG+CGG | - | chr6_1:28720410-28720429 | Msa0881510:intron | 40.0% |
| !! | TGAAGGAAGAGGTATTGGAT+TGG | - | chr6_1:28720436-28720455 | Msa0881510:intron | 40.0% |
| !! | GAAGGAAGAGGTATTGGATT+GGG | - | chr6_1:28720437-28720456 | Msa0881510:intron | 40.0% |
| GTCATTGAAACTGTAAGGGT+CGG | + | chr6_1:28720806-28720825 | None:intergenic | 40.0% | |
| TTTCAGATACTGAGGGATCT+AGG | - | chr6_1:28720952-28720971 | Msa0881510:intron | 40.0% | |
| !! | ATGGTTTGACTGTTTCTGGT+AGG | - | chr6_1:28721034-28721053 | Msa0881510:intron | 40.0% |
| AGAGACCAAACGTGTGAAAA+TGG | - | chr6_1:28721101-28721120 | Msa0881510:intron | 40.0% | |
| GAGACCAAACGTGTGAAAAT+GGG | - | chr6_1:28721102-28721121 | Msa0881510:intron | 40.0% | |
| ATGGAACTTAACAACGGCAA+TGG | - | chr6_1:28721138-28721157 | Msa0881510:intron | 40.0% | |
| GTGCCTTCTTGAAGAAAATC+AGG | + | chr6_1:28721345-28721364 | None:intergenic | 40.0% | |
| ! | CAGGTTTGCTTGTCTTTCTT+TGG | - | chr6_1:28721437-28721456 | Msa0881510:five_prime_UTR | 40.0% |
| !! | TTCTTTGGTGTCTGTTACAG+AGG | - | chr6_1:28721452-28721471 | Msa0881510:five_prime_UTR | 40.0% |
| GCTACAATAACTCATGTCAG+TGG | - | chr6_1:28721532-28721551 | Msa0881510:five_prime_UTR | 40.0% | |
| CAGGAAGTAACGAAGAAACG+CGG | + | chr6_1:28716938-28716957 | None:intergenic | 45.0% | |
| AAAGAGAGGAGAAGTTACCG+TGG | + | chr6_1:28717216-28717235 | None:intergenic | 45.0% | |
| CTGCGTGTGTTAACCAACAA+TGG | + | chr6_1:28717349-28717368 | None:intergenic | 45.0% | |
| ! | ATCTGCATTGACATCTGGAG+GGG | - | chr6_1:28717770-28717789 | Msa0881510:intron | 45.0% |
| GGAACAGTCTAATGGAACAC+CGG | - | chr6_1:28717878-28717897 | Msa0881510:intron | 45.0% | |
| !! | TCCGCAGAGAAAAAAGTGCT+TGG | + | chr6_1:28717921-28717940 | None:intergenic | 45.0% |
| TCCTTGACGAATGTCTTCGA+TGG | + | chr6_1:28718000-28718019 | None:intergenic | 45.0% | |
| CGAAGACATTCGTCAAGGAA+AGG | - | chr6_1:28718001-28718020 | Msa0881510:CDS | 45.0% | |
| ATTGGAGCTTCCTTTGATGG+TGG | - | chr6_1:28718282-28718301 | Msa0881510:intron | 45.0% | |
| !! | TCCTTTGATGGTGGACAGTA+AGG | - | chr6_1:28718291-28718310 | Msa0881510:intron | 45.0% |
| AATCGCGCAATCGACAACAT+TGG | - | chr6_1:28718577-28718596 | Msa0881510:intron | 45.0% | |
| CTAAACATGGTACCACCACA+GGG | - | chr6_1:28718799-28718818 | Msa0881510:intron | 45.0% | |
| TAAACATGGTACCACCACAG+GGG | - | chr6_1:28718800-28718819 | Msa0881510:intron | 45.0% | |
| !! | CCACCATCCCTGTATTTTAG+TGG | + | chr6_1:28718915-28718934 | None:intergenic | 45.0% |
| CCACTAAAATACAGGGATGG+TGG | - | chr6_1:28718912-28718931 | Msa0881510:intron | 45.0% | |
| GCTGATCTTACCATACTTGC+TGG | - | chr6_1:28718969-28718988 | Msa0881510:intron | 45.0% | |
| !! | TGTAGATGATGACGGTTCCA+TGG | - | chr6_1:28719022-28719041 | Msa0881510:intron | 45.0% |
| GAGCTTAGGTAATCTAGCCA+TGG | + | chr6_1:28719042-28719061 | None:intergenic | 45.0% | |
| !! | GCTGACTTGATAAGGTATGG+TGG | - | chr6_1:28719104-28719123 | Msa0881510:intron | 45.0% |
| TAACGTTCTCACCTCATCTC+TGG | + | chr6_1:28719706-28719725 | None:intergenic | 45.0% | |
| TAGCTCCCACTGTAGGAAAA+TGG | - | chr6_1:28719793-28719812 | Msa0881510:intron | 45.0% | |
| GTAGGAAAATGGTAGAGTCC+TGG | - | chr6_1:28719804-28719823 | Msa0881510:intron | 45.0% | |
| !! | CATAGAAGCACTGACTAGGA+AGG | - | chr6_1:28719859-28719878 | Msa0881510:intron | 45.0% |
| TAGGAAGGTAGACCAGATAC+AGG | - | chr6_1:28719874-28719893 | Msa0881510:intron | 45.0% | |
| AGGAAGGTAGACCAGATACA+GGG | - | chr6_1:28719875-28719894 | Msa0881510:intron | 45.0% | |
| CGGGATTGAGCATATTGCAA+TGG | - | chr6_1:28720138-28720157 | Msa0881510:CDS | 45.0% | |
| ! | GTACACTCAGAGTGTCTAAC+TGG | - | chr6_1:28720308-28720327 | Msa0881510:CDS | 45.0% |
| CTGATTTCCACAGTCACATC+TGG | + | chr6_1:28720351-28720370 | None:intergenic | 45.0% | |
| GTATATCTACGCGGACATGA+AGG | - | chr6_1:28720419-28720438 | Msa0881510:intron | 45.0% | |
| ! | GGACATGAAGGAAGAGGTAT+TGG | - | chr6_1:28720431-28720450 | Msa0881510:intron | 45.0% |
| AGTTATAAGCACGGAGCTTG+TGG | + | chr6_1:28720463-28720482 | None:intergenic | 45.0% | |
| GCTCCGTGCTTATAACTTAC+AGG | - | chr6_1:28720466-28720485 | Msa0881510:intron | 45.0% | |
| !! | CAACTCCTCATTGGCTTCTA+CGG | + | chr6_1:28720507-28720526 | None:intergenic | 45.0% |
| GTAGAAGCCAATGAGGAGTT+GGG | - | chr6_1:28720506-28720525 | Msa0881510:CDS | 45.0% | |
| CCATATTCCCTAGAGTCAAC+AGG | + | chr6_1:28720536-28720555 | None:intergenic | 45.0% | |
| !! | CCTGTTGACTCTAGGGAATA+TGG | - | chr6_1:28720533-28720552 | Msa0881510:CDS | 45.0% |
| ! | GACTCTAGGGAATATGGCAT+AGG | - | chr6_1:28720539-28720558 | Msa0881510:CDS | 45.0% |
| CATGGCGATCACTGTTGTTA+TGG | - | chr6_1:28720885-28720904 | Msa0881510:intron | 45.0% | |
| CACAGACATGGCTTAAACCT+TGG | - | chr6_1:28720916-28720935 | Msa0881510:intron | 45.0% | |
| ! | TATGTTGGCCTCAAAGGCTA+TGG | - | chr6_1:28721015-28721034 | Msa0881510:intron | 45.0% |
| CAGTCAAACCATAGCCTTTG+AGG | + | chr6_1:28721026-28721045 | None:intergenic | 45.0% | |
| GGCTATGGTTTGACTGTTTC+TGG | - | chr6_1:28721030-28721049 | Msa0881510:intron | 45.0% | |
| TAAGTTCCATGCCATAGACG+TGG | + | chr6_1:28721128-28721147 | None:intergenic | 45.0% | |
| ATGAAAGAGGGAAAGTGGGG+AGG | + | chr6_1:28716963-28716982 | None:intergenic | 50.0% | |
| GAAGTTACCGTGGACAAGAG+AGG | + | chr6_1:28717206-28717225 | None:intergenic | 50.0% | |
| ! | TCTGCATTGACATCTGGAGG+GGG | - | chr6_1:28717771-28717790 | Msa0881510:intron | 50.0% |
| GATTTGGACATCCCTGCAGA+AGG | - | chr6_1:28717954-28717973 | Msa0881510:CDS | 50.0% | |
| GAATGTCTTCGATGGCCTCA+GGG | + | chr6_1:28717992-28718011 | None:intergenic | 50.0% | |
| GCCATCGAAGACATTCGTCA+AGG | - | chr6_1:28717996-28718015 | Msa0881510:CDS | 50.0% | |
| ATTGGCAACGCCAGAAGCTA+TGG | - | chr6_1:28718195-28718214 | Msa0881510:CDS | 50.0% | |
| GCCTTACTGTCCACCATCAA+AGG | + | chr6_1:28718295-28718314 | None:intergenic | 50.0% | |
| TACCACGGTCACAGTGAATG+CGG | + | chr6_1:28718338-28718357 | None:intergenic | 50.0% | |
| ! | TGTTGTCGATTGCGCGATTG+CGG | + | chr6_1:28718576-28718595 | None:intergenic | 50.0% |
| GCTAAACATGGTACCACCAC+AGG | - | chr6_1:28718798-28718817 | Msa0881510:intron | 50.0% | |
| !! | AGGGGTGTCAGCTCAAGATA+GGG | - | chr6_1:28718818-28718837 | Msa0881510:intron | 50.0% |
| GTGGGAAAATATGGCCTGGT+CGG | + | chr6_1:28718896-28718915 | None:intergenic | 50.0% | |
| TGGCTCCAAACCAGCAAGTA+TGG | + | chr6_1:28718982-28719001 | None:intergenic | 50.0% | |
| ATCTCACACAGAACTGCCAC+TGG | + | chr6_1:28719002-28719021 | None:intergenic | 50.0% | |
| TTGGCAAATTCGCGGAGCTT+AGG | + | chr6_1:28719056-28719075 | None:intergenic | 50.0% | |
| TCTCACGCTTGGCAAATTCG+CGG | + | chr6_1:28719064-28719083 | None:intergenic | 50.0% | |
| TGGTAGAGTCCTGGCTTATG+TGG | - | chr6_1:28719813-28719832 | Msa0881510:intron | 50.0% | |
| TGACAGGGTGACATTGGAGA+TGG | - | chr6_1:28720266-28720285 | Msa0881510:CDS | 50.0% | |
| ATGGAACAGATTGAGGCTGC+CGG | - | chr6_1:28720383-28720402 | Msa0881510:intron | 50.0% | |
| CGATACCGTAGAAGCCAATG+AGG | - | chr6_1:28720499-28720518 | Msa0881510:CDS | 50.0% | |
| CGTAGAAGCCAATGAGGAGT+TGG | - | chr6_1:28720505-28720524 | Msa0881510:CDS | 50.0% | |
| AGGCAATCCCAACTCCTCAT+TGG | + | chr6_1:28720516-28720535 | None:intergenic | 50.0% | |
| !! | TGGGATTGCCTGTTGACTCT+AGG | - | chr6_1:28720525-28720544 | Msa0881510:CDS | 50.0% |
| !! | GGGATTGCCTGTTGACTCTA+GGG | - | chr6_1:28720526-28720545 | Msa0881510:CDS | 50.0% |
| AAACTGTAAGGGTCGGTCTG+AGG | + | chr6_1:28720799-28720818 | None:intergenic | 50.0% | |
| ! | GTGGCCCATTTTCACACGTT+TGG | + | chr6_1:28721109-28721128 | None:intergenic | 50.0% |
| GTGAAAATGGGCCACGTCTA+TGG | - | chr6_1:28721114-28721133 | Msa0881510:intron | 50.0% | |
| TGGACAAGAGAGGAGAGGTG+AGG | + | chr6_1:28717196-28717215 | None:intergenic | 55.0% | |
| CACCTCTCCTCTCTTGTCCA+CGG | - | chr6_1:28717196-28717215 | Msa0881510:three_prime_UTR | 55.0% | |
| TACCGTGGACAAGAGAGGAG+AGG | + | chr6_1:28717201-28717220 | None:intergenic | 55.0% | |
| GAACACCGGCATCAGACTCA+GGG | - | chr6_1:28717892-28717911 | Msa0881510:intron | 55.0% | |
| GGTATCCCTGAGTCTGATGC+CGG | + | chr6_1:28717900-28717919 | None:intergenic | 55.0% | |
| CGAATGTCTTCGATGGCCTC+AGG | + | chr6_1:28717993-28718012 | None:intergenic | 55.0% | |
| TACCGCATTCACTGTGACCG+TGG | - | chr6_1:28718333-28718352 | Msa0881510:CDS | 55.0% | |
| ATCTTGAGCTGACACCCCTG+TGG | + | chr6_1:28718817-28718836 | None:intergenic | 55.0% | |
| !! | CAGGGGTGTCAGCTCAAGAT+AGG | - | chr6_1:28718817-28718836 | Msa0881510:intron | 55.0% |
| CCTGGTCGGTTGAAATCAGC+CGG | + | chr6_1:28718882-28718901 | None:intergenic | 55.0% | |
| GGTGGTGTCTTGAAGAGAGC+TGG | - | chr6_1:28718930-28718949 | Msa0881510:intron | 55.0% | |
| !! | ACTTGCTGGTTTGGAGCCAG+TGG | - | chr6_1:28718983-28719002 | Msa0881510:intron | 55.0% |
| ATTGGGGTAGCTCCCACTGT+AGG | - | chr6_1:28719786-28719805 | Msa0881510:intron | 55.0% | |
| GTGAATGGCCCCCACATTGT+AGG | + | chr6_1:28720091-28720110 | None:intergenic | 55.0% | |
| GGATCTGCCAGATGTGACTG+TGG | - | chr6_1:28720341-28720360 | Msa0881510:intron | 55.0% | |
| AACAGATTGAGGCTGCCGGT+AGG | - | chr6_1:28720387-28720406 | Msa0881510:intron | 55.0% | |
| ACAGATTGAGGCTGCCGGTA+GGG | - | chr6_1:28720388-28720407 | Msa0881510:intron | 55.0% | |
| CTACGCGGACATGAAGGAAG+AGG | - | chr6_1:28720425-28720444 | Msa0881510:intron | 55.0% | |
| GGAATATGGCATAGGCGCAC+AGG | - | chr6_1:28720547-28720566 | Msa0881510:CDS | 55.0% | |
| AATGGGCCACGTCTATGGCA+TGG | - | chr6_1:28721119-28721138 | Msa0881510:intron | 55.0% | |
| GGAACACCGGCATCAGACTC+AGG | - | chr6_1:28717891-28717910 | Msa0881510:intron | 60.0% | |
| TTGAGCTGACACCCCTGTGG+TGG | + | chr6_1:28718814-28718833 | None:intergenic | 60.0% | |
| ! | CCGGCTGATTTCAACCGACC+AGG | - | chr6_1:28718879-28718898 | Msa0881510:intron | 60.0% |
| CAGATTGAGGCTGCCGGTAG+GGG | - | chr6_1:28720389-28720408 | Msa0881510:intron | 60.0% | |
| ! | GAGGGAAAGTGGGGAGGTGC+AGG | + | chr6_1:28716957-28716976 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 28716923 | 28721567 | 28716923 | ID=Msa0881510;Name=Msa0881510 |
| chr6_1 | mRNA | 28716923 | 28721567 | 28716923 | ID=Msa0881510-mRNA-1;Parent=Msa0881510;Name=Msa0881510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=239|1|1|1|1|1|7|361|540 |
| chr6_1 | exon | 28716923 | 28717532 | 28716923 | ID=Msa0881510-mRNA-1:exon:7333;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28717922 | 28718218 | 28717922 | ID=Msa0881510-mRNA-1:exon:7332;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28718325 | 28718454 | 28718325 | ID=Msa0881510-mRNA-1:exon:7331;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28719373 | 28719695 | 28719373 | ID=Msa0881510-mRNA-1:exon:7330;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28720136 | 28720357 | 28720136 | ID=Msa0881510-mRNA-1:exon:7329;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28720468 | 28720813 | 28720468 | ID=Msa0881510-mRNA-1:exon:7328;Parent=Msa0881510-mRNA-1 |
| chr6_1 | exon | 28721273 | 28721567 | 28721273 | ID=Msa0881510-mRNA-1:exon:7327;Parent=Msa0881510-mRNA-1 |
| chr6_1 | five_prime_UTR | 28721329 | 28721567 | 28721329 | ID=Msa0881510-mRNA-1:five_prime_utr;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28721273 | 28721328 | 28721273 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28720468 | 28720813 | 28720468 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28720136 | 28720357 | 28720136 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28719373 | 28719695 | 28719373 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28718325 | 28718454 | 28718325 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28717922 | 28718218 | 28717922 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | CDS | 28717284 | 28717532 | 28717284 | ID=Msa0881510-mRNA-1:cds;Parent=Msa0881510-mRNA-1 |
| chr6_1 | three_prime_UTR | 28716923 | 28717283 | 28716923 | ID=Msa0881510-mRNA-1:three_prime_utr;Parent=Msa0881510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
