Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156290 | XP_024625697.1 | 88.406 | 759 | 45 | 5 | 2 | 721 | 12 | 766 | 0.0 | 1306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156290 | sp|Q5ZK33|LETM1_CHICK | 47.633 | 338 | 167 | 5 | 196 | 530 | 158 | 488 | 5.30e-94 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156290 | G7KSF6 | 88.406 | 759 | 45 | 5 | 2 | 721 | 12 | 766 | 0.0 | 1306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018650 | Msa1156290 | 0.801281 | 9.697240e-49 | -8.615850e-47 |
| Msa0616160 | Msa1156290 | 0.807981 | 3.876004e-50 | -8.615850e-47 |
| Msa0641670 | Msa1156290 | 0.806694 | 7.264325e-50 | -8.615850e-47 |
| Msa0681270 | Msa1156290 | 0.802946 | 4.406541e-49 | -8.615850e-47 |
| Msa0735170 | Msa1156290 | 0.805402 | 1.358098e-49 | -8.615850e-47 |
| Msa0766630 | Msa1156290 | 0.814068 | 1.859800e-51 | -8.615850e-47 |
| Msa0131770 | Msa1156290 | 0.813751 | 2.184535e-51 | -8.615850e-47 |
| Msa0165220 | Msa1156290 | 0.804775 | 1.837167e-49 | -8.615850e-47 |
| Msa1075650 | Msa1156290 | 0.807208 | 5.654999e-50 | -8.615850e-47 |
| Msa1156290 | Msa1309030 | 0.800021 | 1.752417e-48 | -8.615850e-47 |
| Msa1156290 | Msa1353470 | 0.800637 | 1.313005e-48 | -8.615850e-47 |
| Msa0875290 | Msa1156290 | 0.803758 | 2.991890e-49 | -8.615850e-47 |
| Msa0907260 | Msa1156290 | 0.808929 | 2.433003e-50 | -8.615850e-47 |
| Msa0927380 | Msa1156290 | 0.800324 | 1.520348e-48 | -8.615850e-47 |
| Msa0956270 | Msa1156290 | 0.806864 | 6.687857e-50 | -8.615850e-47 |
| Msa0969520 | Msa1156290 | 0.800443 | 1.438109e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156290 | MtrunA17_Chr7g0249691 | 85.160 | 748 | 48 | 7 | 2 | 692 | 12 | 753 | 0.0 | 1246 |
| Msa1156290 | MtrunA17_Chr8g0380541 | 70.376 | 638 | 169 | 5 | 87 | 706 | 75 | 710 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156290 | AT1G65540.1 | 71.710 | 661 | 162 | 6 | 68 | 708 | 65 | 720 | 0.0 | 880 |
| Msa1156290 | AT1G65540.2 | 71.710 | 661 | 162 | 6 | 68 | 708 | 65 | 720 | 0.0 | 880 |
| Msa1156290 | AT1G65540.3 | 71.710 | 661 | 162 | 6 | 68 | 708 | 65 | 720 | 0.0 | 880 |
| Msa1156290 | AT3G59820.3 | 68.539 | 623 | 176 | 3 | 115 | 717 | 131 | 753 | 0.0 | 829 |
| Msa1156290 | AT3G59820.4 | 68.539 | 623 | 176 | 3 | 115 | 717 | 131 | 753 | 0.0 | 829 |
| Msa1156290 | AT3G59820.1 | 68.539 | 623 | 176 | 3 | 115 | 717 | 131 | 753 | 0.0 | 829 |
| Msa1156290 | AT3G59820.2 | 69.748 | 595 | 163 | 2 | 115 | 692 | 131 | 725 | 0.0 | 807 |
Find 178 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTATTGTAAAGAAATTT+TGG | 0.046994 | 7_4:-44598989 | Msa1156290:CDS |
| TATCGGCATCTTCTTTCTTC+TGG | 0.127204 | 7_4:+44593708 | None:intergenic |
| CTTCCCTCTTGATTCTTTCT+AGG | 0.144804 | 7_4:-44596660 | Msa1156290:intron |
| GAACTCGTCGTTAAATAATT+TGG | 0.208722 | 7_4:+44598166 | None:intergenic |
| TATTGGTGACGAAAGGAATT+TGG | 0.238390 | 7_4:-44595899 | Msa1156290:CDS |
| GATGATGTTGATGCTAAAAT+TGG | 0.252074 | 7_4:-44595043 | Msa1156290:CDS |
| GGTGGAAGACATTGTCAAAT+TGG | 0.256061 | 7_4:-44593735 | Msa1156290:CDS |
| ATCGGCATCTTCTTTCTTCT+GGG | 0.293584 | 7_4:+44593709 | None:intergenic |
| GCATGTTGGGAAACAGTTTC+AGG | 0.294743 | 7_4:+44598580 | None:intergenic |
| GTTTCTAATGATGAAATCTT+AGG | 0.301698 | 7_4:-44598194 | Msa1156290:CDS |
| CATGCTGCCTTCCACTTTCC+AGG | 0.310784 | 7_4:-44598562 | Msa1156290:CDS |
| TTTATCTTCTCAGTTCTTGA+TGG | 0.317961 | 7_4:+44599242 | None:intergenic |
| ATTTATCATAGTTCCATTCA+TGG | 0.332981 | 7_4:-44598622 | Msa1156290:CDS |
| TCTTCCTACTTCGTCTTTAT+CGG | 0.335469 | 7_4:+44593691 | None:intergenic |
| TATGCTTCGCAAAAGATTAC+AGG | 0.343366 | 7_4:-44597927 | Msa1156290:CDS |
| AATCCACTTTGCAACACTAT+TGG | 0.345240 | 7_4:-44598791 | Msa1156290:CDS |
| TTAGTTTCTCTTTCGAGATT+GGG | 0.357826 | 7_4:-44599218 | Msa1156290:CDS |
| TTTCATTGCCCAGGGATGAT+TGG | 0.360845 | 7_4:-44598848 | Msa1156290:intron |
| TTCTGCTAATCAATCTAGAT+TGG | 0.362306 | 7_4:-44599159 | Msa1156290:CDS |
| CACAGTATCTTGAAGAAACT+TGG | 0.366611 | 7_4:+44598394 | None:intergenic |
| GGTTTGGAACAAAACTACTT+TGG | 0.368031 | 7_4:-44598770 | Msa1156290:CDS |
| TATCTCTTCTCGTGTTTGTT+CGG | 0.372851 | 7_4:+44595852 | None:intergenic |
| TTCATTGCCCAGGGATGATT+GGG | 0.373555 | 7_4:-44598847 | Msa1156290:intron |
| GTTAGTTTCTCTTTCGAGAT+TGG | 0.373963 | 7_4:-44599219 | Msa1156290:CDS |
| GTTTGGAACAAAACTACTTT+GGG | 0.376079 | 7_4:-44598769 | Msa1156290:CDS |
| GCCTTCTGAAGATTCTGTTT+CGG | 0.377687 | 7_4:-44596448 | Msa1156290:CDS |
| AGAGAAAGAGGAAGAGAATC+AGG | 0.379509 | 7_4:-44595938 | Msa1156290:CDS |
| TTTGAATCTAGTGAATTAGA+TGG | 0.381374 | 7_4:-44599365 | Msa1156290:CDS |
| AAGGGAAAGAAATATGAATA+TGG | 0.383727 | 7_4:-44599276 | Msa1156290:CDS |
| TCTCGTGTTTGTTCGGTCGT+TGG | 0.384664 | 7_4:+44595859 | None:intergenic |
| ACCGCTGGCGGTTGCTAGAC+AGG | 0.393291 | 7_4:-44595018 | Msa1156290:intron |
| ACTTTGCAACACTATTGGTT+TGG | 0.395982 | 7_4:-44598786 | Msa1156290:CDS |
| ATGTATCTGAAGGACACTTT+AGG | 0.397048 | 7_4:-44594525 | Msa1156290:CDS |
| AAAGGTTGCTGATAAGTTCA+TGG | 0.397105 | 7_4:+44594490 | None:intergenic |
| ATCCTTCCTTGCAGCTCTAT+AGG | 0.397356 | 7_4:+44595267 | None:intergenic |
| TCCTTGGATTATCAAGTGTT+GGG | 0.399655 | 7_4:-44599400 | Msa1156290:CDS |
| ATAAACAGATGGGAAAATAT+TGG | 0.403532 | 7_4:-44593756 | Msa1156290:intron |
| CAACATACTTGCGTTATCCT+TGG | 0.406132 | 7_4:-44599416 | Msa1156290:CDS |
| GATGAAGCTGTATAATAGTA+TGG | 0.407165 | 7_4:-44595332 | Msa1156290:CDS |
| ATGGAAAGAGTATTTCTAGA+AGG | 0.407313 | 7_4:-44598704 | Msa1156290:CDS |
| ACAGTATCCACGACCTCATC+TGG | 0.410849 | 7_4:+44596486 | None:intergenic |
| AAATATGCATCAGTACCATA+TGG | 0.415057 | 7_4:+44597956 | None:intergenic |
| CCTGTTCTTTCATCTTATCC+TGG | 0.422082 | 7_4:+44598544 | None:intergenic |
| GAAGGATAGTGATGGTGCTT+TGG | 0.422692 | 7_4:-44595251 | Msa1156290:CDS |
| GATTATCAAGTGTTGGGATT+GGG | 0.423217 | 7_4:-44599394 | Msa1156290:CDS |
| TGGAAATGAAACGGACACTT+TGG | 0.425323 | 7_4:+44599186 | None:intergenic |
| GGAAACAGTTTCAGGAATAC+TGG | 0.425461 | 7_4:+44598588 | None:intergenic |
| TAATGGTTGGTATGTATTCA+TGG | 0.426343 | 7_4:-44593602 | Msa1156290:three_prime_UTR |
| GGTAGCAGCAGTGGTGGAAA+TGG | 0.428127 | 7_4:-44599137 | Msa1156290:CDS |
| TCAAGATACTGTGAAAGAAA+TGG | 0.428407 | 7_4:-44598384 | Msa1156290:CDS |
| AATGTAATCATGAAGAATAA+TGG | 0.431119 | 7_4:-44593619 | Msa1156290:three_prime_UTR |
| GGGCAAAGAAGTTAAGTCAT+TGG | 0.435701 | 7_4:-44598827 | Msa1156290:CDS |
| GACAAAATAGCTCGGAAAGC+TGG | 0.436635 | 7_4:+44598945 | None:intergenic |
| ACAAACACGAGAAGAGATAA+AGG | 0.437299 | 7_4:-44595848 | Msa1156290:CDS |
| GTAGCTTGAACAGCCTCCTC+TGG | 0.437673 | 7_4:+44596522 | None:intergenic |
| TAATGAAGTGATTGAACAAA+AGG | 0.438841 | 7_4:+44599441 | None:intergenic |
| TTTCTTTGCAGCTCAATGAC+TGG | 0.440247 | 7_4:-44596714 | Msa1156290:intron |
| GTGGAAGACATTGTCAAATT+GGG | 0.440816 | 7_4:-44593734 | Msa1156290:CDS |
| AGCAACCTTTCGAAGGATAG+TGG | 0.451344 | 7_4:-44594477 | Msa1156290:intron |
| AAAGTGGAAGGCAGCATGTT+GGG | 0.451596 | 7_4:+44598567 | None:intergenic |
| TGGGCTATGATTCTAGGACT+TGG | 0.451810 | 7_4:-44598969 | Msa1156290:CDS |
| TTTGCAGCTCAATGACTGGC+TGG | 0.452194 | 7_4:-44596710 | Msa1156290:intron |
| ATCCTTGGATTATCAAGTGT+TGG | 0.458970 | 7_4:-44599401 | Msa1156290:CDS |
| GGATTATCAAGTGTTGGGAT+TGG | 0.462063 | 7_4:-44599395 | Msa1156290:CDS |
| AGGATTGCTTGGATTGCGTT+CGG | 0.464132 | 7_4:-44597305 | Msa1156290:CDS |
| TGTAGAGATCGAGGATTGCT+TGG | 0.465537 | 7_4:-44597316 | Msa1156290:CDS |
| GGTAAATATGTGTAAATACA+TGG | 0.468825 | 7_4:-44597987 | Msa1156290:CDS |
| TACATGGGTATCAGCCCATA+TGG | 0.468892 | 7_4:-44597971 | Msa1156290:CDS |
| CCAGGATAAGATGAAAGAAC+AGG | 0.469685 | 7_4:-44598544 | Msa1156290:intron |
| TGGTTTGACCTTTCCTGTGA+CGG | 0.471702 | 7_4:+44596542 | None:intergenic |
| AGTAGTTGCCGACAAAGAAA+AGG | 0.473866 | 7_4:+44599328 | None:intergenic |
| ATGAGGTCGTGGATACTGTT+GGG | 0.474571 | 7_4:-44596482 | Msa1156290:CDS |
| ATAGGAGGAGGAAGAGAAAG+AGG | 0.476372 | 7_4:-44595950 | Msa1156290:intron |
| TGTAGGAGGCATTGAAAAGA+AGG | 0.477179 | 7_4:-44598439 | Msa1156290:intron |
| AATAGTATGGTAGGGAAAGA+AGG | 0.477611 | 7_4:-44595319 | Msa1156290:CDS |
| AAGCTGTATAATAGTATGGT+AGG | 0.477631 | 7_4:-44595328 | Msa1156290:CDS |
| GTTGGAATATCTTGAAATGC+AGG | 0.478824 | 7_4:-44596412 | Msa1156290:CDS |
| GGTGGAAGAAATGCGGCAAC+AGG | 0.480505 | 7_4:-44597284 | Msa1156290:intron |
| TCACTTTGGATAACATTAGC+AGG | 0.483499 | 7_4:-44598145 | Msa1156290:intron |
| GGATAGTGATGGTGCTTTGG+AGG | 0.487429 | 7_4:-44595248 | Msa1156290:CDS |
| TCTAGAAATACTCTTTCCAT+TGG | 0.487498 | 7_4:+44598707 | None:intergenic |
| AGAAGGTACTCAAGGTGAGC+AGG | 0.488579 | 7_4:-44595302 | Msa1156290:CDS |
| GAAAGAATCAAGAGGGAAGA+TGG | 0.489587 | 7_4:+44596664 | None:intergenic |
| GGAAATGAAACGGACACTTT+GGG | 0.489629 | 7_4:+44599187 | None:intergenic |
| CTTAGGTTGATGCTATGCTC+CGG | 0.491453 | 7_4:-44595084 | Msa1156290:intron |
| GCAGCGGATACAACCTCATC+AGG | 0.492517 | 7_4:+44594549 | None:intergenic |
| ACCAATAGATTCTGTCACTT+TGG | 0.494064 | 7_4:+44595915 | None:intergenic |
| TTCGGAGAGGAAGAGAAAGT+TGG | 0.495063 | 7_4:-44596430 | Msa1156290:CDS |
| GGCAACAGAATCTCCATGAA+TGG | 0.498458 | 7_4:+44598609 | None:intergenic |
| TTAATGGAACAGGTCAGAAC+AGG | 0.498584 | 7_4:-44598224 | Msa1156290:intron |
| AAGTGTCCGTTTCATTTCCA+CGG | 0.499063 | 7_4:-44599183 | Msa1156290:CDS |
| ATCTGATACTAAACAGAAGA+AGG | 0.502056 | 7_4:-44599111 | Msa1156290:CDS |
| GCCAAAGTGACAGAATCTAT+TGG | 0.502567 | 7_4:-44595916 | Msa1156290:CDS |
| TCTGCTAATCAATCTAGATT+GGG | 0.505305 | 7_4:-44599158 | Msa1156290:CDS |
| AGCCTATAGAGCTGCAAGGA+AGG | 0.505557 | 7_4:-44595269 | Msa1156290:CDS |
| TTCTTTGCCAGATGAGGTCG+TGG | 0.508050 | 7_4:-44596493 | Msa1156290:CDS |
| TTAGGTTGATGCTATGCTCC+GGG | 0.508598 | 7_4:-44595083 | Msa1156290:intron |
| TCTAATTCACTAGATTCAAA+TGG | 0.508701 | 7_4:+44599368 | None:intergenic |
| ATGGATAAACAGGCCTCGCT+TGG | 0.508997 | 7_4:-44598008 | Msa1156290:intron |
| TTGCGAGATCAGCCAAGCAT+TGG | 0.513290 | 7_4:-44595797 | Msa1156290:CDS |
| ACAGAAGAAGGAAGCTTCGC+CGG | 0.519003 | 7_4:-44599099 | Msa1156290:CDS |
| ACTATGATAAATATAGCAAA+AGG | 0.519482 | 7_4:+44598633 | None:intergenic |
| GATGAGGTCGTGGATACTGT+TGG | 0.521404 | 7_4:-44596483 | Msa1156290:CDS |
| AAGGACACTTTAGGAAAAGA+AGG | 0.523689 | 7_4:-44594516 | Msa1156290:CDS |
| ATTTAACGACGAGTTCACTT+TGG | 0.528523 | 7_4:-44598159 | Msa1156290:CDS |
| TGTTCTGGCAGGGACTATGA+TGG | 0.528563 | 7_4:-44594582 | Msa1156290:intron |
| TTTCATCTTATCCTGGAAAG+TGG | 0.538647 | 7_4:+44598551 | None:intergenic |
| TTCTTCAGCACTTGTTGACA+AGG | 0.539616 | 7_4:-44595206 | Msa1156290:intron |
| ATAGATTCAGTACTGTTATG+TGG | 0.544117 | 7_4:+44599005 | None:intergenic |
| ATGCTAAAACAGCCAATGCT+TGG | 0.545395 | 7_4:+44595785 | None:intergenic |
| TAGTTTCTCTTTCGAGATTG+GGG | 0.547487 | 7_4:-44599217 | Msa1156290:CDS |
| GTAGTTGCCGACAAAGAAAA+GGG | 0.549313 | 7_4:+44599329 | None:intergenic |
| CAGAAGCCGTGGAAATGAAA+CGG | 0.551530 | 7_4:+44599177 | None:intergenic |
| AGAGTATTTCTAGAAGGGAG+AGG | 0.552842 | 7_4:-44598698 | Msa1156290:CDS |
| AACAGATGGGAAAATATTGG+TGG | 0.553061 | 7_4:-44593753 | Msa1156290:intron |
| ACTCTCTTCTTTGCCAGATG+AGG | 0.553997 | 7_4:-44596499 | Msa1156290:CDS |
| ATGCTAAAATTGGAGACCGC+TGG | 0.559425 | 7_4:-44595033 | Msa1156290:CDS |
| AGAGGGAAGATGGCAAAGAA+TGG | 0.562838 | 7_4:+44596674 | None:intergenic |
| GATGCCGATAAAGACGAAGT+AGG | 0.563105 | 7_4:-44593695 | Msa1156290:CDS |
| TGGAAAGAGTATTTCTAGAA+GGG | 0.563861 | 7_4:-44598703 | Msa1156290:CDS |
| ATCTTATCCTGGAAAGTGGA+AGG | 0.564217 | 7_4:+44598555 | None:intergenic |
| TCCCAACACTTGATAATCCA+AGG | 0.566030 | 7_4:+44599399 | None:intergenic |
| TTTCTCTTTCGAGATTGGGG+TGG | 0.568272 | 7_4:-44599214 | Msa1156290:CDS |
| TAATCATGAAGAATAATGGT+TGG | 0.568846 | 7_4:-44593615 | Msa1156290:three_prime_UTR |
| TTATTGTTAAAACTTGCCAA+TGG | 0.570263 | 7_4:-44598723 | Msa1156290:CDS |
| AATATGCATCAGTACCATAT+GGG | 0.570674 | 7_4:+44597957 | None:intergenic |
| TGCTCATCGACAAAATAGCT+CGG | 0.572861 | 7_4:+44598937 | None:intergenic |
| TTGTCGGCAACTACTGGACA+TGG | 0.573830 | 7_4:-44599320 | Msa1156290:CDS |
| ACCTGTCTAGCAACCGCCAG+CGG | 0.576835 | 7_4:+44595017 | None:intergenic |
| GATAAACTGATTCAAGAAGA+AGG | 0.579164 | 7_4:-44597376 | Msa1156290:CDS |
| ATGATTCACATGAACATGGA+AGG | 0.581121 | 7_4:-44599295 | Msa1156290:CDS |
| AAACCAATAGTGTTGCAAAG+TGG | 0.583548 | 7_4:+44598788 | None:intergenic |
| TACCATAAAAGCGAAAGCTA+AGG | 0.584560 | 7_4:-44599045 | Msa1156290:CDS |
| AGCTGTATAATAGTATGGTA+GGG | 0.587260 | 7_4:-44595327 | Msa1156290:CDS |
| GTTCTGGCAGGGACTATGAT+GGG | 0.587747 | 7_4:-44594581 | Msa1156290:intron |
| AAAGAAGTTAAGTCATTGGA+AGG | 0.587927 | 7_4:-44598823 | Msa1156290:CDS |
| TGTGAAAGAAATGGCGAAGG+AGG | 0.589070 | 7_4:-44598375 | Msa1156290:CDS |
| GAATTTGGCTACAAAAGAAG+TGG | 0.589143 | 7_4:-44595884 | Msa1156290:CDS |
| GTGAATTAGATGGCTTGAGT+CGG | 0.589239 | 7_4:-44599355 | Msa1156290:CDS |
| TCTAGATTGGGTAGCAGCAG+TGG | 0.589930 | 7_4:-44599146 | Msa1156290:CDS |
| AGATTGGGTAGCAGCAGTGG+TGG | 0.595026 | 7_4:-44599143 | Msa1156290:CDS |
| ATTGCTTGGATTGCGTTCGG+TGG | 0.596535 | 7_4:-44597302 | Msa1156290:CDS |
| ATCCGCTGCTATGTATCTGA+AGG | 0.599069 | 7_4:-44594535 | Msa1156290:CDS |
| AATGCAGGAGGAGCTAATCA+AGG | 0.599916 | 7_4:-44596397 | Msa1156290:intron |
| TCCGAAACAGAATCTTCAGA+AGG | 0.600323 | 7_4:+44596447 | None:intergenic |
| GTAAATATGTGTAAATACAT+GGG | 0.602856 | 7_4:-44597986 | Msa1156290:CDS |
| GTAGGGAAAGAAGGTACTCA+AGG | 0.605196 | 7_4:-44595310 | Msa1156290:CDS |
| GAAAGTGGAAGGCAGCATGT+TGG | 0.605293 | 7_4:+44598566 | None:intergenic |
| ACAGCCTCATCACACTCCTC+CGG | 0.605444 | 7_4:+44599080 | None:intergenic |
| ACTGATTCAAGAAGAAGGTG+TGG | 0.607180 | 7_4:-44597371 | Msa1156290:CDS |
| ACTTATCAGCAACCTTTCGA+AGG | 0.609157 | 7_4:-44594484 | Msa1156290:CDS |
| CAGAATCTATTGGTGACGAA+AGG | 0.610189 | 7_4:-44595906 | Msa1156290:CDS |
| TTACACATATTTACCAAGCG+AGG | 0.610500 | 7_4:+44597995 | None:intergenic |
| CGTCAAGCTTGTAGAGATCG+AGG | 0.615742 | 7_4:-44597325 | Msa1156290:CDS |
| TCTTGACGAATTTATGAACA+AGG | 0.622171 | 7_4:-44598309 | Msa1156290:intron |
| CTAAAATTGGAGACCGCTGG+CGG | 0.623668 | 7_4:-44595030 | Msa1156290:CDS |
| CTGAAGATTCTGTTTCGGAG+AGG | 0.625196 | 7_4:-44596443 | Msa1156290:CDS |
| ACTAACCACTATCCTTCGAA+AGG | 0.626702 | 7_4:+44594472 | None:intergenic |
| TGATTCACATGAACATGGAA+GGG | 0.630828 | 7_4:-44599294 | Msa1156290:CDS |
| TACTGTGAAAGAAATGGCGA+AGG | 0.632448 | 7_4:-44598378 | Msa1156290:CDS |
| ACGAGAAGAGATAAAGGCAA+AGG | 0.633542 | 7_4:-44595842 | Msa1156290:CDS |
| GAAGAAGGAAGCTTCGCCGG+AGG | 0.638107 | 7_4:-44599096 | Msa1156290:CDS |
| GGACATGATTCACATGAACA+TGG | 0.639098 | 7_4:-44599299 | Msa1156290:CDS |
| AGGAAAGGTCAAACCAGAGG+AGG | 0.639949 | 7_4:-44596535 | Msa1156290:CDS |
| AATACCTAGAAAGAATCAAG+AGG | 0.641075 | 7_4:+44596656 | None:intergenic |
| GAGGTTCAGAATTCACGAAG+TGG | 0.651282 | 7_4:-44598356 | Msa1156290:CDS |
| TTCGCCGGAGGAGTGTGATG+AGG | 0.652757 | 7_4:-44599084 | Msa1156290:CDS |
| GGGAGAGGCAGCAACTCACG+AGG | 0.658654 | 7_4:-44598683 | Msa1156290:CDS |
| AGATTGATTAGCAGAAGCCG+TGG | 0.659322 | 7_4:+44599166 | None:intergenic |
| TGCGTTCGGTGGAAGAAATG+CGG | 0.659753 | 7_4:-44597291 | Msa1156290:CDS |
| AGCAAGCCTATAGAGCTGCA+AGG | 0.661765 | 7_4:-44595273 | Msa1156290:CDS |
| CACAGGAAAGGTCAAACCAG+AGG | 0.670593 | 7_4:-44596538 | Msa1156290:CDS |
| ATACCTAGAAAGAATCAAGA+GGG | 0.673015 | 7_4:+44596657 | None:intergenic |
| GCTGCAAGGAAGGATAGTGA+TGG | 0.674240 | 7_4:-44595259 | Msa1156290:CDS |
| TGAGGTCGTGGATACTGTTG+GGG | 0.677713 | 7_4:-44596481 | Msa1156290:CDS |
| GTCCTTCAGATACATAGCAG+CGG | 0.678318 | 7_4:+44594533 | None:intergenic |
| GGAATATCTTGAAATGCAGG+AGG | 0.683353 | 7_4:-44596409 | Msa1156290:CDS |
| TGGGAAAGTGACACCTGATG+AGG | 0.727095 | 7_4:-44594562 | Msa1156290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAATTATAAATGTTTAAA+TGG | - | chr7_4:44595781-44595800 | Msa1156290:CDS | 10.0% |
| !! | AAAATAATGTTTAAAAACAA+GGG | - | chr7_4:44596097-44596116 | Msa1156290:intron | 10.0% |
| !!! | AATCTATTGTAAAGAAATTT+TGG | - | chr7_4:44594054-44594073 | Msa1156290:intron | 15.0% |
| !!! | ATCTATTGTAAAGAAATTTT+GGG | - | chr7_4:44594055-44594074 | Msa1156290:intron | 15.0% |
| !!! | TTTTATTATCACTCAATTTT+GGG | - | chr7_4:44594570-44594589 | Msa1156290:CDS | 15.0% |
| !!! | TTTCATTTATTATTTTATGC+CGG | - | chr7_4:44595235-44595254 | Msa1156290:CDS | 15.0% |
| !!! | ATTTTTTTGAATTAGAAAAC+TGG | - | chr7_4:44595866-44595885 | Msa1156290:CDS | 15.0% |
| !! | GAAAATAATGTTTAAAAACA+AGG | - | chr7_4:44596096-44596115 | Msa1156290:intron | 15.0% |
| !! | TAGTAATTCCAATAATAAAT+TGG | - | chr7_4:44596180-44596199 | Msa1156290:intron | 15.0% |
| !!! | ACACTACTTTAAAATTATAA+TGG | + | chr7_4:44596746-44596765 | None:intergenic | 15.0% |
| !!! | AATAATTTTTGGTAAATGAT+TGG | - | chr7_4:44597323-44597342 | Msa1156290:CDS | 15.0% |
| !! | AATAGTAATTAATTCATCAT+AGG | + | chr7_4:44598241-44598260 | None:intergenic | 15.0% |
| !!! | ACATTTTCATATTAAGATAT+TGG | + | chr7_4:44599220-44599239 | None:intergenic | 15.0% |
| !! | ACTATGATAAATATAGCAAA+AGG | + | chr7_4:44594413-44594432 | None:intergenic | 20.0% |
| !!! | CTTTTATTATCACTCAATTT+TGG | - | chr7_4:44594569-44594588 | Msa1156290:CDS | 20.0% |
| !! | TATTATTATGTTAATGGAAC+AGG | - | chr7_4:44594809-44594828 | Msa1156290:intron | 20.0% |
| !! | GTAAATATGTGTAAATACAT+GGG | - | chr7_4:44595057-44595076 | Msa1156290:CDS | 20.0% |
| !! | AAAAAATACGTCATAATACA+TGG | - | chr7_4:44595402-44595421 | Msa1156290:intron | 20.0% |
| !! | AAAAATACGTCATAATACAT+GGG | - | chr7_4:44595403-44595422 | Msa1156290:intron | 20.0% |
| !!! | GTTTTATTTTAAGTTAAGAG+TGG | - | chr7_4:44595432-44595451 | Msa1156290:intron | 20.0% |
| !! | AATGTAAAAAAGGAAGATAA+TGG | + | chr7_4:44595920-44595939 | None:intergenic | 20.0% |
| !! | AAATAAGTTTGATAAGAAGA+AGG | + | chr7_4:44595990-44596009 | None:intergenic | 20.0% |
| !! | GTAAATAAACTCTTTCTTAT+AGG | - | chr7_4:44596122-44596141 | Msa1156290:intron | 20.0% |
| !! | CTTCTTTACCAATTTATTAT+TGG | + | chr7_4:44596191-44596210 | None:intergenic | 20.0% |
| !! | CAATAATAAATTGGTAAAGA+AGG | - | chr7_4:44596189-44596208 | Msa1156290:intron | 20.0% |
| !!! | TTTTCAAAAATGACTTATGT+AGG | + | chr7_4:44596914-44596933 | None:intergenic | 20.0% |
| !!! | TTCCAACTACTAATAATTTT+TGG | - | chr7_4:44597312-44597331 | Msa1156290:CDS | 20.0% |
| !! | TACCAAAAATTATTAGTAGT+TGG | + | chr7_4:44597317-44597336 | None:intergenic | 20.0% |
| !! | AAAACAATGGTAATTAATCA+TGG | + | chr7_4:44598085-44598104 | None:intergenic | 20.0% |
| !! | AATTTGCATAAAGAAAACAA+TGG | + | chr7_4:44598098-44598117 | None:intergenic | 20.0% |
| !! | TTGCATATGAAGATTTATAA+GGG | + | chr7_4:44598406-44598425 | None:intergenic | 20.0% |
| !! | TCGTAATTCATAACTATAAA+AGG | - | chr7_4:44598909-44598928 | Msa1156290:intron | 20.0% |
| !! | TAATTCATAACTATAAAAGG+AGG | - | chr7_4:44598912-44598931 | Msa1156290:intron | 20.0% |
| !! | TTATGGTGAAATTAAAAAGT+TGG | - | chr7_4:44599100-44599119 | Msa1156290:CDS | 20.0% |
| !! | TATGGTGAAATTAAAAAGTT+GGG | - | chr7_4:44599101-44599120 | Msa1156290:CDS | 20.0% |
| !! | AATGTAATCATGAAGAATAA+TGG | - | chr7_4:44599424-44599443 | Msa1156290:CDS | 20.0% |
| ! | TAATGAAGTGATTGAACAAA+AGG | + | chr7_4:44593605-44593624 | None:intergenic | 25.0% |
| ! | TCTAATTCACTAGATTCAAA+TGG | + | chr7_4:44593678-44593697 | None:intergenic | 25.0% |
| ! | TTTGAATCTAGTGAATTAGA+TGG | - | chr7_4:44593678-44593697 | Msa1156290:exon | 25.0% |
| ! | AAGGGAAAGAAATATGAATA+TGG | - | chr7_4:44593767-44593786 | Msa1156290:intron | 25.0% |
| ! | TTATTGTTAAAACTTGCCAA+TGG | - | chr7_4:44594320-44594339 | Msa1156290:intron | 25.0% |
| ! | ATTTATCATAGTTCCATTCA+TGG | - | chr7_4:44594421-44594440 | Msa1156290:intron | 25.0% |
| ! | GTTTCTAATGATGAAATCTT+AGG | - | chr7_4:44594849-44594868 | Msa1156290:intron | 25.0% |
| ! | AATTAGTTGAACATAACCAA+TGG | + | chr7_4:44594936-44594955 | None:intergenic | 25.0% |
| ! | GGTAAATATGTGTAAATACA+TGG | - | chr7_4:44595056-44595075 | Msa1156290:CDS | 25.0% |
| !! | TTGATTCCTTTTCTTCTTTT+TGG | - | chr7_4:44595150-44595169 | Msa1156290:intron | 25.0% |
| !! | TGATTCCTTTTCTTCTTTTT+GGG | - | chr7_4:44595151-44595170 | Msa1156290:intron | 25.0% |
| ! | CATAAGATAAGTACAATAGT+TGG | + | chr7_4:44595303-44595322 | None:intergenic | 25.0% |
| ! | ATGCATGTTACAACAATATA+TGG | - | chr7_4:44595320-44595339 | Msa1156290:CDS | 25.0% |
| ! | TTACAACAATATATGGATGT+CGG | - | chr7_4:44595327-44595346 | Msa1156290:CDS | 25.0% |
| !! | GTTTCTAAAAGTAGCAATTA+AGG | + | chr7_4:44595892-44595911 | None:intergenic | 25.0% |
| !!! | TCTTCCTTTTTTACATTTTG+CGG | - | chr7_4:44595923-44595942 | Msa1156290:CDS | 25.0% |
| ! | AAAACCGCAAAATGTAAAAA+AGG | + | chr7_4:44595930-44595949 | None:intergenic | 25.0% |
| !! | GGAATGAGAAATACTATTTT+AGG | - | chr7_4:44596143-44596162 | Msa1156290:intron | 25.0% |
| ! | TGACATTTACATAATACAGT+TGG | - | chr7_4:44596224-44596243 | Msa1156290:intron | 25.0% |
| ! | CAAAACATAAATATCTCTGA+TGG | + | chr7_4:44596698-44596717 | None:intergenic | 25.0% |
| ! | CTTCATTTCACTTTAACATT+GGG | - | chr7_4:44596779-44596798 | Msa1156290:intron | 25.0% |
| ! | AAGAAAAATAGAATGGAAGA+GGG | - | chr7_4:44596863-44596882 | Msa1156290:intron | 25.0% |
| ! | GATTCAAATACAATGTTGAT+TGG | + | chr7_4:44596984-44597003 | None:intergenic | 25.0% |
| ! | AACAGGAAAATCAACATATT+TGG | + | chr7_4:44597008-44597027 | None:intergenic | 25.0% |
| ! | ATGGTTGCAAGATATTTAAT+AGG | - | chr7_4:44597075-44597094 | Msa1156290:intron | 25.0% |
| !!! | TTGTCTTATTGTTTTTCAGT+CGG | - | chr7_4:44597356-44597375 | Msa1156290:CDS | 25.0% |
| !! | AGGTTATAAAATGTGTTACT+AGG | + | chr7_4:44597623-44597642 | None:intergenic | 25.0% |
| ! | AATACCTGAATTACATTCTT+AGG | - | chr7_4:44597942-44597961 | Msa1156290:CDS | 25.0% |
| !!! | TCTTAGAAAGTATTATGACA+TGG | - | chr7_4:44598359-44598378 | Msa1156290:CDS | 25.0% |
| !! | AAAGTATTATGACATGGATA+TGG | - | chr7_4:44598365-44598384 | Msa1156290:CDS | 25.0% |
| ! | GTTGCATATGAAGATTTATA+AGG | + | chr7_4:44598407-44598426 | None:intergenic | 25.0% |
| !! | ATAAGTGTCATTCAAATGTT+TGG | - | chr7_4:44598435-44598454 | Msa1156290:CDS | 25.0% |
| !! | TTTGGAACAATATGAGAATA+AGG | + | chr7_4:44598614-44598633 | None:intergenic | 25.0% |
| !!! | CGTTCATATTTGCTAATTTT+TGG | + | chr7_4:44598632-44598651 | None:intergenic | 25.0% |
| !!! | TTAGTTGCATTAATTTGCAA+GGG | + | chr7_4:44598686-44598705 | None:intergenic | 25.0% |
| !!! | ATTAGTTGCATTAATTTGCA+AGG | + | chr7_4:44598687-44598706 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAGCTCGAAA+AGG | + | chr7_4:44598759-44598778 | None:intergenic | 25.0% |
| ! | CTAAATGCTAGAGAATATAA+CGG | + | chr7_4:44598867-44598886 | None:intergenic | 25.0% |
| ! | GCATTACAATATGATTTGAT+TGG | - | chr7_4:44599052-44599071 | Msa1156290:CDS | 25.0% |
| !!! | CTTTTTAATTTCACCATAAG+AGG | + | chr7_4:44599099-44599118 | None:intergenic | 25.0% |
| ! | AATATGAAAATGTGTTCAAC+TGG | - | chr7_4:44599227-44599246 | Msa1156290:CDS | 25.0% |
| ! | TTCTGTTAATCATAAACAGA+TGG | - | chr7_4:44599276-44599295 | Msa1156290:CDS | 25.0% |
| ! | TCTGTTAATCATAAACAGAT+GGG | - | chr7_4:44599277-44599296 | Msa1156290:CDS | 25.0% |
| ! | ATAAACAGATGGGAAAATAT+TGG | - | chr7_4:44599287-44599306 | Msa1156290:CDS | 25.0% |
| ! | TAATCATGAAGAATAATGGT+TGG | - | chr7_4:44599428-44599447 | Msa1156290:CDS | 25.0% |
| TTTATCTTCTCAGTTCTTGA+TGG | + | chr7_4:44593804-44593823 | None:intergenic | 30.0% | |
| TTAGTTTCTCTTTCGAGATT+GGG | - | chr7_4:44593825-44593844 | Msa1156290:intron | 30.0% | |
| TTCTGCTAATCAATCTAGAT+TGG | - | chr7_4:44593884-44593903 | Msa1156290:intron | 30.0% | |
| TCTGCTAATCAATCTAGATT+GGG | - | chr7_4:44593885-44593904 | Msa1156290:intron | 30.0% | |
| ATCTGATACTAAACAGAAGA+AGG | - | chr7_4:44593932-44593951 | Msa1156290:intron | 30.0% | |
| ATAGATTCAGTACTGTTATG+TGG | + | chr7_4:44594041-44594060 | None:intergenic | 30.0% | |
| ! | AAATTTTGGGCTATGATTCT+AGG | - | chr7_4:44594068-44594087 | Msa1156290:intron | 30.0% |
| ACATCACACTTAAAAACAAG+AGG | + | chr7_4:44594148-44594167 | None:intergenic | 30.0% | |
| AAAGAAGTTAAGTCATTGGA+AGG | - | chr7_4:44594220-44594239 | Msa1156290:intron | 30.0% | |
| ! | GTTTGGAACAAAACTACTTT+GGG | - | chr7_4:44594274-44594293 | Msa1156290:intron | 30.0% |
| !! | GGCAAGTTTTAACAATAATC+TGG | + | chr7_4:44594318-44594337 | None:intergenic | 30.0% |
| TCTAGAAATACTCTTTCCAT+TGG | + | chr7_4:44594339-44594358 | None:intergenic | 30.0% | |
| !! | ATGGAAAGAGTATTTCTAGA+AGG | - | chr7_4:44594339-44594358 | Msa1156290:intron | 30.0% |
| !! | TGGAAAGAGTATTTCTAGAA+GGG | - | chr7_4:44594340-44594359 | Msa1156290:intron | 30.0% |
| AAACATTATCTGCCTATCTA+CGG | - | chr7_4:44594542-44594561 | Msa1156290:CDS | 30.0% | |
| !! | ATTATCACTCAATTTTGGGA+AGG | - | chr7_4:44594574-44594593 | Msa1156290:CDS | 30.0% |
| TCAAGATACTGTGAAAGAAA+TGG | - | chr7_4:44594659-44594678 | Msa1156290:intron | 30.0% | |
| TCTTGACGAATTTATGAACA+AGG | - | chr7_4:44594734-44594753 | Msa1156290:intron | 30.0% | |
| GAACTCGTCGTTAAATAATT+TGG | + | chr7_4:44594880-44594899 | None:intergenic | 30.0% | |
| CTGTTATGAATCTCATATTC+TGG | - | chr7_4:44594964-44594983 | Msa1156290:intron | 30.0% | |
| TAGCATAACGATCATGAAAT+TGG | + | chr7_4:44594994-44595013 | None:intergenic | 30.0% | |
| !!! | ATGTCTTTTGGTTTCGAAAA+TGG | - | chr7_4:44595016-44595035 | Msa1156290:intron | 30.0% |
| AATATGCATCAGTACCATAT+GGG | + | chr7_4:44595089-44595108 | None:intergenic | 30.0% | |
| AAATATGCATCAGTACCATA+TGG | + | chr7_4:44595090-44595109 | None:intergenic | 30.0% | |
| GTTATCCCAAAAAGAAGAAA+AGG | + | chr7_4:44595159-44595178 | None:intergenic | 30.0% | |
| !! | TACAAGTCATTGGTTCTTAT+AGG | - | chr7_4:44595198-44595217 | Msa1156290:intron | 30.0% |
| ! | TTGTCTGGTTTAGAATTTAG+AGG | - | chr7_4:44595266-44595285 | Msa1156290:CDS | 30.0% |
| AAGTTCAAATGTTATTGCTG+TGG | - | chr7_4:44595549-44595568 | Msa1156290:intron | 30.0% | |
| AGTTCAAATGTTATTGCTGT+GGG | - | chr7_4:44595550-44595569 | Msa1156290:intron | 30.0% | |
| !! | TTGAATTGTTTTGCTTTTGC+AGG | - | chr7_4:44595632-44595651 | Msa1156290:intron | 30.0% |
| ! | GATAAACTGATTCAAGAAGA+AGG | - | chr7_4:44595667-44595686 | Msa1156290:intron | 30.0% |
| CTAGTAAAGTAACACAATGT+TGG | + | chr7_4:44595839-44595858 | None:intergenic | 30.0% | |
| !! | ATTGTGTTACTTTACTAGCT+GGG | - | chr7_4:44595841-44595860 | Msa1156290:CDS | 30.0% |
| ! | AAAAAGGAAGATAATGGTTC+TGG | + | chr7_4:44595914-44595933 | None:intergenic | 30.0% |
| ! | CAAGATTTTCGAAATTGTGT+TGG | - | chr7_4:44596065-44596084 | Msa1156290:intron | 30.0% |
| TAAATTGGTAAAGAAGGAAG+TGG | - | chr7_4:44596195-44596214 | Msa1156290:intron | 30.0% | |
| ! | TCTTGATGCTGTTTAAAAGA+CGG | - | chr7_4:44596255-44596274 | Msa1156290:intron | 30.0% |
| ATACCTAGAAAGAATCAAGA+GGG | + | chr7_4:44596389-44596408 | None:intergenic | 30.0% | |
| AATACCTAGAAAGAATCAAG+AGG | + | chr7_4:44596390-44596409 | None:intergenic | 30.0% | |
| ! | AGAGATATTTATGTTTTGCG+AGG | - | chr7_4:44596700-44596719 | Msa1156290:CDS | 30.0% |
| ! | GAGATATTTATGTTTTGCGA+GGG | - | chr7_4:44596701-44596720 | Msa1156290:CDS | 30.0% |
| TGTTAAAGTGAAATGAAGCA+AGG | + | chr7_4:44596777-44596796 | None:intergenic | 30.0% | |
| GCTTCATTTCACTTTAACAT+TGG | - | chr7_4:44596778-44596797 | Msa1156290:intron | 30.0% | |
| TATATGTAATGAAGTCCAGT+AGG | - | chr7_4:44596840-44596859 | Msa1156290:intron | 30.0% | |
| !! | CATTCTATTTTTCTTCCTAC+TGG | + | chr7_4:44596858-44596877 | None:intergenic | 30.0% |
| CAGTAGGAAGAAAAATAGAA+TGG | - | chr7_4:44596856-44596875 | Msa1156290:intron | 30.0% | |
| GAAGAAAAATAGAATGGAAG+AGG | - | chr7_4:44596862-44596881 | Msa1156290:intron | 30.0% | |
| AGAAAAATAGAATGGAAGAG+GGG | - | chr7_4:44596864-44596883 | Msa1156290:intron | 30.0% | |
| TGGATGACAATAGTTGAAAA+AGG | + | chr7_4:44596964-44596983 | None:intergenic | 30.0% | |
| ! | TGCTTTAGATTTGAGATTGA+TGG | - | chr7_4:44597056-44597075 | Msa1156290:intron | 30.0% |
| GTTGCAAGATATTTAATAGG+AGG | - | chr7_4:44597078-44597097 | Msa1156290:intron | 30.0% | |
| ! | TTTTAGCATCAACATCTGTA+AGG | - | chr7_4:44597272-44597291 | Msa1156290:intron | 30.0% |
| AAGTGTCTATTATGACTGAT+TGG | - | chr7_4:44597522-44597541 | Msa1156290:intron | 30.0% | |
| AGTGTCTATTATGACTGATT+GGG | - | chr7_4:44597523-44597542 | Msa1156290:intron | 30.0% | |
| AGCTTGATAAATAGCTCATT+CGG | + | chr7_4:44597647-44597666 | None:intergenic | 30.0% | |
| GATGAAGCTGTATAATAGTA+TGG | - | chr7_4:44597711-44597730 | Msa1156290:intron | 30.0% | |
| AAGCTGTATAATAGTATGGT+AGG | - | chr7_4:44597715-44597734 | Msa1156290:intron | 30.0% | |
| AGCTGTATAATAGTATGGTA+GGG | - | chr7_4:44597716-44597735 | Msa1156290:intron | 30.0% | |
| TCAACCTAAGAATGTAATTC+AGG | + | chr7_4:44597949-44597968 | None:intergenic | 30.0% | |
| GATGATGTTGATGCTAAAAT+TGG | - | chr7_4:44598000-44598019 | Msa1156290:intron | 30.0% | |
| AAGAAATTAGCCAACTTCAA+TGG | - | chr7_4:44598149-44598168 | Msa1156290:CDS | 30.0% | |
| !! | GACCTTATAGCTTGTTATAA+GGG | - | chr7_4:44598211-44598230 | Msa1156290:CDS | 30.0% |
| !! | ACCTTATAGCTTGTTATAAG+GGG | - | chr7_4:44598212-44598231 | Msa1156290:CDS | 30.0% |
| TTTATTAGTGACCTGTTTCA+AGG | - | chr7_4:44598265-44598284 | Msa1156290:intron | 30.0% | |
| AAGATATTGGATCATCTACA+TGG | + | chr7_4:44599207-44599226 | None:intergenic | 30.0% | |
| ! | TAATGGTTGGTATGTATTCA+TGG | - | chr7_4:44599441-44599460 | Msa1156290:CDS | 30.0% |
| ATCCTTGGATTATCAAGTGT+TGG | - | chr7_4:44593642-44593661 | Msa1156290:three_prime_UTR | 35.0% | |
| TCCTTGGATTATCAAGTGTT+GGG | - | chr7_4:44593643-44593662 | Msa1156290:three_prime_UTR | 35.0% | |
| !! | GATTATCAAGTGTTGGGATT+GGG | - | chr7_4:44593649-44593668 | Msa1156290:three_prime_UTR | 35.0% |
| ATGATTCACATGAACATGGA+AGG | - | chr7_4:44593748-44593767 | Msa1156290:CDS | 35.0% | |
| TGATTCACATGAACATGGAA+GGG | - | chr7_4:44593749-44593768 | Msa1156290:CDS | 35.0% | |
| ! | GTTAGTTTCTCTTTCGAGAT+TGG | - | chr7_4:44593824-44593843 | Msa1156290:intron | 35.0% |
| TAGTTTCTCTTTCGAGATTG+GGG | - | chr7_4:44593826-44593845 | Msa1156290:intron | 35.0% | |
| TACCATAAAAGCGAAAGCTA+AGG | - | chr7_4:44593998-44594017 | Msa1156290:intron | 35.0% | |
| ! | ATATGTGTGTCAGACTTTTC+TGG | - | chr7_4:44594170-44594189 | Msa1156290:intron | 35.0% |
| AATCCACTTTGCAACACTAT+TGG | - | chr7_4:44594252-44594271 | Msa1156290:intron | 35.0% | |
| AAACCAATAGTGTTGCAAAG+TGG | + | chr7_4:44594258-44594277 | None:intergenic | 35.0% | |
| ! | ACTTTGCAACACTATTGGTT+TGG | - | chr7_4:44594257-44594276 | Msa1156290:intron | 35.0% |
| ! | GGTTTGGAACAAAACTACTT+TGG | - | chr7_4:44594273-44594292 | Msa1156290:intron | 35.0% |
| TTTCATCTTATCCTGGAAAG+TGG | + | chr7_4:44594495-44594514 | None:intergenic | 35.0% | |
| CACAGTATCTTGAAGAAACT+TGG | + | chr7_4:44594652-44594671 | None:intergenic | 35.0% | |
| ATTTAACGACGAGTTCACTT+TGG | - | chr7_4:44594884-44594903 | Msa1156290:intron | 35.0% | |
| TCACTTTGGATAACATTAGC+AGG | - | chr7_4:44594898-44594917 | Msa1156290:intron | 35.0% | |
| TTTGGATAACATTAGCAGGT+TGG | - | chr7_4:44594902-44594921 | Msa1156290:intron | 35.0% | |
| TGAACATAACCAATGGTAGA+AGG | + | chr7_4:44594929-44594948 | None:intergenic | 35.0% | |
| ! | CGTTATGCTAACATGTCTTT+TGG | - | chr7_4:44595004-44595023 | Msa1156290:intron | 35.0% |
| GGTTTCGAAAATGGATAAAC+AGG | - | chr7_4:44595025-44595044 | Msa1156290:CDS | 35.0% | |
| TTACACATATTTACCAAGCG+AGG | + | chr7_4:44595051-44595070 | None:intergenic | 35.0% | |
| TATGCTTCGCAAAAGATTAC+AGG | - | chr7_4:44595116-44595135 | Msa1156290:intron | 35.0% | |
| !!! | TTTTGGGATAACTCTGATTC+TGG | - | chr7_4:44595167-44595186 | Msa1156290:intron | 35.0% |
| GGTGTATGTATACAAGTCAT+TGG | - | chr7_4:44595188-44595207 | Msa1156290:intron | 35.0% | |
| TGGTTCTTATAGGTTAGAGT+TGG | - | chr7_4:44595208-44595227 | Msa1156290:CDS | 35.0% | |
| AAACCAGACAACGAAAAATC+CGG | + | chr7_4:44595257-44595276 | None:intergenic | 35.0% | |
| !! | CATTGTGTTACTTTACTAGC+TGG | - | chr7_4:44595840-44595859 | Msa1156290:CDS | 35.0% |
| ! | GATTTTCGAAATTGTGTTGG+TGG | - | chr7_4:44596068-44596087 | Msa1156290:intron | 35.0% |
| ! | CGTTAGAAGAATTTTGCTTC+TGG | - | chr7_4:44596436-44596455 | Msa1156290:CDS | 35.0% |
| GTTGGAATATCTTGAAATGC+AGG | - | chr7_4:44596631-44596650 | Msa1156290:intron | 35.0% | |
| ! | ATATTTATGTTTTGCGAGGG+AGG | - | chr7_4:44596704-44596723 | Msa1156290:CDS | 35.0% |
| TGGGAATAATTAATAGCTGC+AGG | - | chr7_4:44596798-44596817 | Msa1156290:intron | 35.0% | |
| GAAAAATAGAATGGAAGAGG+GGG | - | chr7_4:44596865-44596884 | Msa1156290:intron | 35.0% | |
| TGTTGAAGTTGCTATGCTTT+CGG | - | chr7_4:44597024-44597043 | Msa1156290:intron | 35.0% | |
| GCAAGATATTTAATAGGAGG+AGG | - | chr7_4:44597081-44597100 | Msa1156290:intron | 35.0% | |
| ! | ACCAATAGATTCTGTCACTT+TGG | + | chr7_4:44597131-44597150 | None:intergenic | 35.0% |
| !! | TATTGGTGACGAAAGGAATT+TGG | - | chr7_4:44597144-44597163 | Msa1156290:intron | 35.0% |
| GAATTTGGCTACAAAAGAAG+TGG | - | chr7_4:44597159-44597178 | Msa1156290:intron | 35.0% | |
| TATCTCTTCTCGTGTTTGTT+CGG | + | chr7_4:44597194-44597213 | None:intergenic | 35.0% | |
| ACAAACACGAGAAGAGATAA+AGG | - | chr7_4:44597195-44597214 | Msa1156290:intron | 35.0% | |
| TCAAAGTCCTGAAACTCAAA+TGG | - | chr7_4:44597481-44597500 | Msa1156290:intron | 35.0% | |
| CATAAGTAGGCTAACTATAC+TGG | - | chr7_4:44597569-44597588 | Msa1156290:intron | 35.0% | |
| ! | AAAATGTGTTACTAGGCTGT+GGG | + | chr7_4:44597616-44597635 | None:intergenic | 35.0% |
| ! | TAAAATGTGTTACTAGGCTG+TGG | + | chr7_4:44597617-44597636 | None:intergenic | 35.0% |
| GCTTGATAAATAGCTCATTC+GGG | + | chr7_4:44597646-44597665 | None:intergenic | 35.0% | |
| AATAGTATGGTAGGGAAAGA+AGG | - | chr7_4:44597724-44597743 | Msa1156290:intron | 35.0% | |
| !!! | CAATTTCTTTTTCAAGTGCC+CGG | + | chr7_4:44597981-44598000 | None:intergenic | 35.0% |
| ATGGATTCTACCATTGAAGT+TGG | + | chr7_4:44598162-44598181 | None:intergenic | 35.0% | |
| TCAATGGTAGAATCCATTGA+AGG | - | chr7_4:44598165-44598184 | Msa1156290:CDS | 35.0% | |
| CAATGGTAGAATCCATTGAA+GGG | - | chr7_4:44598166-44598185 | Msa1156290:CDS | 35.0% | |
| !! | GGACCTTATAGCTTGTTATA+AGG | - | chr7_4:44598210-44598229 | Msa1156290:CDS | 35.0% |
| TCCCCTTATAACAAGCTATA+AGG | + | chr7_4:44598216-44598235 | None:intergenic | 35.0% | |
| TCTTTGAATCTCCTTGAAAC+AGG | + | chr7_4:44598279-44598298 | None:intergenic | 35.0% | |
| ATGTATCTGAAGGACACTTT+AGG | - | chr7_4:44598518-44598537 | Msa1156290:intron | 35.0% | |
| ! | AAGGACACTTTAGGAAAAGA+AGG | - | chr7_4:44598527-44598546 | Msa1156290:intron | 35.0% |
| AAAGGTTGCTGATAAGTTCA+TGG | + | chr7_4:44598556-44598575 | None:intergenic | 35.0% | |
| ! | AAAACACTTTTCGAACCATG+TGG | - | chr7_4:44599000-44599019 | Msa1156290:CDS | 35.0% |
| ! | AAACACTTTTCGAACCATGT+GGG | - | chr7_4:44599001-44599020 | Msa1156290:CDS | 35.0% |
| TTGGAACTAACACAACGATA+TGG | - | chr7_4:44599030-44599049 | Msa1156290:CDS | 35.0% | |
| ! | GCATAACAATTAGCCTCTTA+TGG | - | chr7_4:44599083-44599102 | Msa1156290:CDS | 35.0% |
| TATCATTCTACGTTGTACGA+TGG | - | chr7_4:44599163-44599182 | Msa1156290:CDS | 35.0% | |
| AACAGATGGGAAAATATTGG+TGG | - | chr7_4:44599290-44599309 | Msa1156290:CDS | 35.0% | |
| GTGGAAGACATTGTCAAATT+GGG | - | chr7_4:44599309-44599328 | Msa1156290:CDS | 35.0% | |
| TCTTCCTACTTCGTCTTTAT+CGG | + | chr7_4:44599355-44599374 | None:intergenic | 35.0% | |
| CAACATACTTGCGTTATCCT+TGG | - | chr7_4:44593627-44593646 | Msa1156290:three_prime_UTR | 40.0% | |
| ! | TCCCAACACTTGATAATCCA+AGG | + | chr7_4:44593647-44593666 | None:intergenic | 40.0% |
| !! | GGATTATCAAGTGTTGGGAT+TGG | - | chr7_4:44593648-44593667 | Msa1156290:three_prime_UTR | 40.0% |
| GTGAATTAGATGGCTTGAGT+CGG | - | chr7_4:44593688-44593707 | Msa1156290:CDS | 40.0% | |
| ! | TCGGTTTCCCTTTTCTTTGT+CGG | - | chr7_4:44593707-44593726 | Msa1156290:CDS | 40.0% |
| GTAGTTGCCGACAAAGAAAA+GGG | + | chr7_4:44593717-44593736 | None:intergenic | 40.0% | |
| AGTAGTTGCCGACAAAGAAA+AGG | + | chr7_4:44593718-44593737 | None:intergenic | 40.0% | |
| ! | TTTTCTTTGTCGGCAACTAC+TGG | - | chr7_4:44593717-44593736 | Msa1156290:CDS | 40.0% |
| GGACATGATTCACATGAACA+TGG | - | chr7_4:44593744-44593763 | Msa1156290:CDS | 40.0% | |
| GGAAATGAAACGGACACTTT+GGG | + | chr7_4:44593859-44593878 | None:intergenic | 40.0% | |
| TGGAAATGAAACGGACACTT+TGG | + | chr7_4:44593860-44593879 | None:intergenic | 40.0% | |
| AAGTGTCCGTTTCATTTCCA+CGG | - | chr7_4:44593860-44593879 | Msa1156290:intron | 40.0% | |
| !! | AGCCTTAGCTTTCGCTTTTA+TGG | + | chr7_4:44594003-44594022 | None:intergenic | 40.0% |
| TGCTCATCGACAAAATAGCT+CGG | + | chr7_4:44594109-44594128 | None:intergenic | 40.0% | |
| !!! | TTTCTGGTTTTTCATTGCCC+AGG | - | chr7_4:44594186-44594205 | Msa1156290:intron | 40.0% |
| !!! | TTCTGGTTTTTCATTGCCCA+GGG | - | chr7_4:44594187-44594206 | Msa1156290:intron | 40.0% |
| GGGCAAAGAAGTTAAGTCAT+TGG | - | chr7_4:44594216-44594235 | Msa1156290:intron | 40.0% | |
| !! | AGAGTATTTCTAGAAGGGAG+AGG | - | chr7_4:44594345-44594364 | Msa1156290:intron | 40.0% |
| ! | GGACAACAGTCGATATTTTC+AGG | - | chr7_4:44594381-44594400 | Msa1156290:intron | 40.0% |
| GGAAACAGTTTCAGGAATAC+TGG | + | chr7_4:44594458-44594477 | None:intergenic | 40.0% | |
| ATCTTATCCTGGAAAGTGGA+AGG | + | chr7_4:44594491-44594510 | None:intergenic | 40.0% | |
| CCTGTTCTTTCATCTTATCC+TGG | + | chr7_4:44594502-44594521 | None:intergenic | 40.0% | |
| CCAGGATAAGATGAAAGAAC+AGG | - | chr7_4:44594499-44594518 | Msa1156290:CDS | 40.0% | |
| ! | AATAAAAGCACGCCGTAGAT+AGG | + | chr7_4:44594557-44594576 | None:intergenic | 40.0% |
| !! | TTTGGGAAGGCTTAACTTGT+AGG | - | chr7_4:44594587-44594606 | Msa1156290:intron | 40.0% |
| !! | TGTAGGAGGCATTGAAAAGA+AGG | - | chr7_4:44594604-44594623 | Msa1156290:intron | 40.0% |
| TACTGTGAAAGAAATGGCGA+AGG | - | chr7_4:44594665-44594684 | Msa1156290:intron | 40.0% | |
| TTAATGGAACAGGTCAGAAC+AGG | - | chr7_4:44594819-44594838 | Msa1156290:intron | 40.0% | |
| GTAGTGCATAACTGAATTGC+AGG | - | chr7_4:44595377-44595396 | Msa1156290:intron | 40.0% | |
| TGACTTTGCTGCAGTATCTA+GGG | - | chr7_4:44595490-44595509 | Msa1156290:intron | 40.0% | |
| AGCTGAATTCTCAGCTCTTA+TGG | - | chr7_4:44595526-44595545 | Msa1156290:intron | 40.0% | |
| ! | ACTGATTCAAGAAGAAGGTG+TGG | - | chr7_4:44595672-44595691 | Msa1156290:intron | 40.0% |
| GTTTAAAAGACGGCATCTTG+TGG | - | chr7_4:44596265-44596284 | Msa1156290:intron | 40.0% | |
| AGTTTACAACCCCCAAACAT+GGG | + | chr7_4:44596304-44596323 | None:intergenic | 40.0% | |
| TTTCTTTGCAGCTCAATGAC+TGG | - | chr7_4:44596329-44596348 | Msa1156290:intron | 40.0% | |
| GAAAGAATCAAGAGGGAAGA+TGG | + | chr7_4:44596382-44596401 | None:intergenic | 40.0% | |
| CTTCCCTCTTGATTCTTTCT+AGG | - | chr7_4:44596383-44596402 | Msa1156290:intron | 40.0% | |
| ! | GCCTTCTGAAGATTCTGTTT+CGG | - | chr7_4:44596595-44596614 | Msa1156290:intron | 40.0% |
| TCCGAAACAGAATCTTCAGA+AGG | + | chr7_4:44596599-44596618 | None:intergenic | 40.0% | |
| GGAATATCTTGAAATGCAGG+AGG | - | chr7_4:44596634-44596653 | Msa1156290:intron | 40.0% | |
| ! | GAAAGCATAGCAACTTCAAC+AGG | + | chr7_4:44597025-44597044 | None:intergenic | 40.0% |
| AGAGAAAGAGGAAGAGAATC+AGG | - | chr7_4:44597105-44597124 | Msa1156290:intron | 40.0% | |
| GCCAAAGTGACAGAATCTAT+TGG | - | chr7_4:44597127-44597146 | Msa1156290:intron | 40.0% | |
| !! | CAGAATCTATTGGTGACGAA+AGG | - | chr7_4:44597137-44597156 | Msa1156290:intron | 40.0% |
| ACGAGAAGAGATAAAGGCAA+AGG | - | chr7_4:44597201-44597220 | Msa1156290:intron | 40.0% | |
| ATGCTAAAACAGCCAATGCT+TGG | + | chr7_4:44597261-44597280 | None:intergenic | 40.0% | |
| ! | AAGAACGTGCGAAGTTTTTG+AGG | - | chr7_4:44597385-44597404 | Msa1156290:CDS | 40.0% |
| TGTAGAATTGATCCGTGTCT+AGG | - | chr7_4:44597433-44597452 | Msa1156290:intron | 40.0% | |
| GTAGAATTGATCCGTGTCTA+GGG | - | chr7_4:44597434-44597453 | Msa1156290:intron | 40.0% | |
| ATTCACTACATCCCTAGACA+CGG | + | chr7_4:44597448-44597467 | None:intergenic | 40.0% | |
| GGGATGTAGTGAATACGTTA+TGG | - | chr7_4:44597454-44597473 | Msa1156290:intron | 40.0% | |
| ! | GAAACTGCCATTTGAGTTTC+AGG | + | chr7_4:44597491-44597510 | None:intergenic | 40.0% |
| CTGTATCTACGCACATAAGT+AGG | - | chr7_4:44597556-44597575 | Msa1156290:intron | 40.0% | |
| ! | TAACTATACTGGTCTGTAGG+AGG | - | chr7_4:44597580-44597599 | Msa1156290:intron | 40.0% |
| TGATAAATAGCTCATTCGGG+AGG | + | chr7_4:44597643-44597662 | None:intergenic | 40.0% | |
| !! | CAGGTTAGAACTGATTTGCA+TGG | + | chr7_4:44597681-44597700 | None:intergenic | 40.0% |
| ! | TTCTTCAGCACTTGTTGACA+AGG | - | chr7_4:44597837-44597856 | Msa1156290:intron | 40.0% |
| TCAAATGTTTGGCCATGTTC+TGG | - | chr7_4:44598446-44598465 | Msa1156290:intron | 40.0% | |
| ACTTATCAGCAACCTTTCGA+AGG | - | chr7_4:44598559-44598578 | Msa1156290:CDS | 40.0% | |
| ACTAACCACTATCCTTCGAA+AGG | + | chr7_4:44598574-44598593 | None:intergenic | 40.0% | |
| ! | TCTTTGTTGCACCGTCTTTT+AGG | - | chr7_4:44598791-44598810 | Msa1156290:CDS | 40.0% |
| AGTTCCAAAAACTTCCCACA+TGG | + | chr7_4:44599018-44599037 | None:intergenic | 40.0% | |
| GGTGGAAGACATTGTCAAAT+TGG | - | chr7_4:44599308-44599327 | Msa1156290:CDS | 40.0% | |
| ATCGGCATCTTCTTTCTTCT+GGG | + | chr7_4:44599337-44599356 | None:intergenic | 40.0% | |
| TATCGGCATCTTCTTTCTTC+TGG | + | chr7_4:44599338-44599357 | None:intergenic | 40.0% | |
| TTTCTCTTTCGAGATTGGGG+TGG | - | chr7_4:44593829-44593848 | Msa1156290:intron | 45.0% | |
| CAGAAGCCGTGGAAATGAAA+CGG | + | chr7_4:44593869-44593888 | None:intergenic | 45.0% | |
| AGATTGATTAGCAGAAGCCG+TGG | + | chr7_4:44593880-44593899 | None:intergenic | 45.0% | |
| !! | TGGGCTATGATTCTAGGACT+TGG | - | chr7_4:44594074-44594093 | Msa1156290:intron | 45.0% |
| GACAAAATAGCTCGGAAAGC+TGG | + | chr7_4:44594101-44594120 | None:intergenic | 45.0% | |
| !! | GAGCTATTTTGTCGATGAGC+AGG | - | chr7_4:44594108-44594127 | Msa1156290:intron | 45.0% |
| TTTCATTGCCCAGGGATGAT+TGG | - | chr7_4:44594195-44594214 | Msa1156290:intron | 45.0% | |
| TTCATTGCCCAGGGATGATT+GGG | - | chr7_4:44594196-44594215 | Msa1156290:intron | 45.0% | |
| TTCTTTGCCCAATCATCCCT+GGG | + | chr7_4:44594206-44594225 | None:intergenic | 45.0% | |
| GGCAACAGAATCTCCATGAA+TGG | + | chr7_4:44594437-44594456 | None:intergenic | 45.0% | |
| GCATGTTGGGAAACAGTTTC+AGG | + | chr7_4:44594466-44594485 | None:intergenic | 45.0% | |
| AAAGTGGAAGGCAGCATGTT+GGG | + | chr7_4:44594479-44594498 | None:intergenic | 45.0% | |
| TGTGAAAGAAATGGCGAAGG+AGG | - | chr7_4:44594668-44594687 | Msa1156290:intron | 45.0% | |
| GAGGTTCAGAATTCACGAAG+TGG | - | chr7_4:44594687-44594706 | Msa1156290:intron | 45.0% | |
| TACATGGGTATCAGCCCATA+TGG | - | chr7_4:44595072-44595091 | Msa1156290:CDS | 45.0% | |
| ! | ATGCCGGATTTTTCGTTGTC+TGG | - | chr7_4:44595251-44595270 | Msa1156290:CDS | 45.0% |
| CGGCATTCTCACTTACATTC+TGG | - | chr7_4:44595347-44595366 | Msa1156290:intron | 45.0% | |
| GTGACTTTGCTGCAGTATCT+AGG | - | chr7_4:44595489-44595508 | Msa1156290:intron | 45.0% | |
| TTATTGCTGTGGGAGCAAGT+TGG | - | chr7_4:44595560-44595579 | Msa1156290:intron | 45.0% | |
| TGTAGAGATCGAGGATTGCT+TGG | - | chr7_4:44595727-44595746 | Msa1156290:intron | 45.0% | |
| AGGATTGCTTGGATTGCGTT+CGG | - | chr7_4:44595738-44595757 | Msa1156290:intron | 45.0% | |
| AAAAGACGGCATCTTGTGGT+TGG | - | chr7_4:44596269-44596288 | Msa1156290:intron | 45.0% | |
| TGGACTGTTAGTCCCATGTT+TGG | - | chr7_4:44596289-44596308 | Msa1156290:intron | 45.0% | |
| GGACTGTTAGTCCCATGTTT+GGG | - | chr7_4:44596290-44596309 | Msa1156290:intron | 45.0% | |
| GACTGTTAGTCCCATGTTTG+GGG | - | chr7_4:44596291-44596310 | Msa1156290:intron | 45.0% | |
| ACTGTTAGTCCCATGTTTGG+GGG | - | chr7_4:44596292-44596311 | Msa1156290:intron | 45.0% | |
| CAGTTTACAACCCCCAAACA+TGG | + | chr7_4:44596305-44596324 | None:intergenic | 45.0% | |
| AGAGGGAAGATGGCAAAGAA+TGG | + | chr7_4:44596372-44596391 | None:intergenic | 45.0% | |
| ! | AGCATTTTCCGTCACAGGAA+AGG | - | chr7_4:44596493-44596512 | Msa1156290:CDS | 45.0% |
| TGGTTTGACCTTTCCTGTGA+CGG | + | chr7_4:44596504-44596523 | None:intergenic | 45.0% | |
| ACTCTCTTCTTTGCCAGATG+AGG | - | chr7_4:44596544-44596563 | Msa1156290:CDS | 45.0% | |
| ATGAGGTCGTGGATACTGTT+GGG | - | chr7_4:44596561-44596580 | Msa1156290:intron | 45.0% | |
| CTGAAGATTCTGTTTCGGAG+AGG | - | chr7_4:44596600-44596619 | Msa1156290:intron | 45.0% | |
| TTCGGAGAGGAAGAGAAAGT+TGG | - | chr7_4:44596613-44596632 | Msa1156290:intron | 45.0% | |
| AATGCAGGAGGAGCTAATCA+AGG | - | chr7_4:44596646-44596665 | Msa1156290:intron | 45.0% | |
| ATAGGAGGAGGAAGAGAAAG+AGG | - | chr7_4:44597093-44597112 | Msa1156290:intron | 45.0% | |
| ! | GGCTAACTATACTGGTCTGT+AGG | - | chr7_4:44597577-44597596 | Msa1156290:intron | 45.0% |
| ATACAGCTTCATCTGCACAG+TGG | + | chr7_4:44597704-44597723 | None:intergenic | 45.0% | |
| !! | GTAGGGAAAGAAGGTACTCA+AGG | - | chr7_4:44597733-44597752 | Msa1156290:intron | 45.0% |
| ATCCTTCCTTGCAGCTCTAT+AGG | + | chr7_4:44597779-44597798 | None:intergenic | 45.0% | |
| ! | GAAGGATAGTGATGGTGCTT+TGG | - | chr7_4:44597792-44597811 | Msa1156290:intron | 45.0% |
| !! | CTTAGGTTGATGCTATGCTC+CGG | - | chr7_4:44597959-44597978 | Msa1156290:CDS | 45.0% |
| !! | TTAGGTTGATGCTATGCTCC+GGG | - | chr7_4:44597960-44597979 | Msa1156290:CDS | 45.0% |
| ATGCTAAAATTGGAGACCGC+TGG | - | chr7_4:44598010-44598029 | Msa1156290:intron | 45.0% | |
| GAAACTATGGTGCCCTTCAA+TGG | + | chr7_4:44598181-44598200 | None:intergenic | 45.0% | |
| !! | TTGAAGGGCACCATAGTTTC+AGG | - | chr7_4:44598181-44598200 | Msa1156290:CDS | 45.0% |
| ATCCGCTGCTATGTATCTGA+AGG | - | chr7_4:44598508-44598527 | Msa1156290:intron | 45.0% | |
| GTCCTTCAGATACATAGCAG+CGG | + | chr7_4:44598513-44598532 | None:intergenic | 45.0% | |
| AGCAACCTTTCGAAGGATAG+TGG | - | chr7_4:44598566-44598585 | Msa1156290:CDS | 45.0% | |
| GGAAAACCTCGTGTTGCATT+AGG | + | chr7_4:44598738-44598757 | None:intergenic | 45.0% | |
| CAGACATGGCTCCTAAAAGA+CGG | + | chr7_4:44598805-44598824 | None:intergenic | 45.0% | |
| TGCTCTCTAAATCCTCTCAG+TGG | + | chr7_4:44598838-44598857 | None:intergenic | 45.0% | |
| ! | CGAACCATGTGGGAAGTTTT+TGG | - | chr7_4:44599011-44599030 | Msa1156290:CDS | 45.0% |
| GATGCCGATAAAGACGAAGT+AGG | - | chr7_4:44599348-44599367 | Msa1156290:CDS | 45.0% | |
| !!! | TTTTTATATTATTATGTTAA+TGG | - | chr7_4:44594803-44594822 | Msa1156290:intron | 5.0% |
| TTGTCGGCAACTACTGGACA+TGG | - | chr7_4:44593723-44593742 | Msa1156290:CDS | 50.0% | |
| TCTAGATTGGGTAGCAGCAG+TGG | - | chr7_4:44593897-44593916 | Msa1156290:intron | 50.0% | |
| ACAGAAGAAGGAAGCTTCGC+CGG | - | chr7_4:44593944-44593963 | Msa1156290:intron | 50.0% | |
| CTTCTTTGCCCAATCATCCC+TGG | + | chr7_4:44594207-44594226 | None:intergenic | 50.0% | |
| GAAAGTGGAAGGCAGCATGT+TGG | + | chr7_4:44594480-44594499 | None:intergenic | 50.0% | |
| !! | GGGAAGGCTTAACTTGTAGG+AGG | - | chr7_4:44594590-44594609 | Msa1156290:intron | 50.0% |
| !! | CAGGTTGGTCCTTCTACCAT+TGG | - | chr7_4:44594917-44594936 | Msa1156290:intron | 50.0% |
| ATGGATAAACAGGCCTCGCT+TGG | - | chr7_4:44595035-44595054 | Msa1156290:CDS | 50.0% | |
| CGTCAAGCTTGTAGAGATCG+AGG | - | chr7_4:44595718-44595737 | Msa1156290:intron | 50.0% | |
| ATTGCTTGGATTGCGTTCGG+TGG | - | chr7_4:44595741-44595760 | Msa1156290:intron | 50.0% | |
| ! | TGCGTTCGGTGGAAGAAATG+CGG | - | chr7_4:44595752-44595771 | Msa1156290:intron | 50.0% |
| TTTGCAGCTCAATGACTGGC+TGG | - | chr7_4:44596333-44596352 | Msa1156290:intron | 50.0% | |
| !! | TGCAGAGCATTTTCCGTCAC+AGG | - | chr7_4:44596488-44596507 | Msa1156290:CDS | 50.0% |
| CACAGGAAAGGTCAAACCAG+AGG | - | chr7_4:44596505-44596524 | Msa1156290:CDS | 50.0% | |
| AGGAAAGGTCAAACCAGAGG+AGG | - | chr7_4:44596508-44596527 | Msa1156290:CDS | 50.0% | |
| TTCTTTGCCAGATGAGGTCG+TGG | - | chr7_4:44596550-44596569 | Msa1156290:CDS | 50.0% | |
| ACAGTATCCACGACCTCATC+TGG | + | chr7_4:44596560-44596579 | None:intergenic | 50.0% | |
| GATGAGGTCGTGGATACTGT+TGG | - | chr7_4:44596560-44596579 | Msa1156290:intron | 50.0% | |
| TGAGGTCGTGGATACTGTTG+GGG | - | chr7_4:44596562-44596581 | Msa1156290:intron | 50.0% | |
| TCTCGTGTTTGTTCGGTCGT+TGG | + | chr7_4:44597187-44597206 | None:intergenic | 50.0% | |
| TTGCGAGATCAGCCAAGCAT+TGG | - | chr7_4:44597246-44597265 | Msa1156290:intron | 50.0% | |
| !! | AGAAGGTACTCAAGGTGAGC+AGG | - | chr7_4:44597741-44597760 | Msa1156290:intron | 50.0% |
| AGCAAGCCTATAGAGCTGCA+AGG | - | chr7_4:44597770-44597789 | Msa1156290:intron | 50.0% | |
| AGCCTATAGAGCTGCAAGGA+AGG | - | chr7_4:44597774-44597793 | Msa1156290:intron | 50.0% | |
| GCTGCAAGGAAGGATAGTGA+TGG | - | chr7_4:44597784-44597803 | Msa1156290:intron | 50.0% | |
| ! | GGATAGTGATGGTGCTTTGG+AGG | - | chr7_4:44597795-44597814 | Msa1156290:intron | 50.0% |
| CTAAAATTGGAGACCGCTGG+CGG | - | chr7_4:44598013-44598032 | Msa1156290:intron | 50.0% | |
| ! | AGGGCACCATAGTTTCAGGA+TGG | - | chr7_4:44598185-44598204 | Msa1156290:CDS | 50.0% |
| GGGCACCATAGTTTCAGGAT+GGG | - | chr7_4:44598186-44598205 | Msa1156290:CDS | 50.0% | |
| GGCACCATAGTTTCAGGATG+GGG | - | chr7_4:44598187-44598206 | Msa1156290:CDS | 50.0% | |
| GCACCATAGTTTCAGGATGG+GGG | - | chr7_4:44598188-44598207 | Msa1156290:CDS | 50.0% | |
| CACCATAGTTTCAGGATGGG+GGG | - | chr7_4:44598189-44598208 | Msa1156290:CDS | 50.0% | |
| ATGTTTGGCCATGTTCTGGC+AGG | - | chr7_4:44598450-44598469 | Msa1156290:intron | 50.0% | |
| TGTTTGGCCATGTTCTGGCA+GGG | - | chr7_4:44598451-44598470 | Msa1156290:intron | 50.0% | |
| TCATAGTCCCTGCCAGAACA+TGG | + | chr7_4:44598461-44598480 | None:intergenic | 50.0% | |
| TGTTCTGGCAGGGACTATGA+TGG | - | chr7_4:44598461-44598480 | Msa1156290:intron | 50.0% | |
| GTTCTGGCAGGGACTATGAT+GGG | - | chr7_4:44598462-44598481 | Msa1156290:intron | 50.0% | |
| TGGGAAAGTGACACCTGATG+AGG | - | chr7_4:44598481-44598500 | Msa1156290:intron | 50.0% | |
| CAGAGACCTAATGCAACACG+AGG | - | chr7_4:44598729-44598748 | Msa1156290:CDS | 50.0% | |
| GTGGTCATTGCTCACAGACA+TGG | + | chr7_4:44598819-44598838 | None:intergenic | 50.0% | |
| TGTGAGCAATGACCACTGAG+AGG | - | chr7_4:44598823-44598842 | Msa1156290:CDS | 50.0% | |
| AGATTGGGTAGCAGCAGTGG+TGG | - | chr7_4:44593900-44593919 | Msa1156290:intron | 55.0% | |
| ! | GGTAGCAGCAGTGGTGGAAA+TGG | - | chr7_4:44593906-44593925 | Msa1156290:intron | 55.0% |
| ACAGCCTCATCACACTCCTC+CGG | + | chr7_4:44593966-44593985 | None:intergenic | 55.0% | |
| CATGCTGCCTTCCACTTTCC+AGG | - | chr7_4:44594481-44594500 | Msa1156290:CDS | 55.0% | |
| GGTGGAAGAAATGCGGCAAC+AGG | - | chr7_4:44595759-44595778 | Msa1156290:intron | 55.0% | |
| GTAGCTTGAACAGCCTCCTC+TGG | + | chr7_4:44596524-44596543 | None:intergenic | 55.0% | |
| AGAATGGAAGAGGGGGAGAG+AGG | - | chr7_4:44596872-44596891 | Msa1156290:intron | 55.0% | |
| ! | GTGTTACTAGGCTGTGGGCT+GGG | + | chr7_4:44597611-44597630 | None:intergenic | 55.0% |
| ! | TGTGTTACTAGGCTGTGGGC+TGG | + | chr7_4:44597612-44597631 | None:intergenic | 55.0% |
| AGCTTCATCTGCACAGTGGC+AGG | + | chr7_4:44597700-44597719 | None:intergenic | 55.0% | |
| GTCCCCCCATCCTGAAACTA+TGG | + | chr7_4:44598194-44598213 | None:intergenic | 55.0% | |
| GCAGCGGATACAACCTCATC+AGG | + | chr7_4:44598497-44598516 | None:intergenic | 55.0% | |
| GAAGAAGGAAGCTTCGCCGG+AGG | - | chr7_4:44593947-44593966 | Msa1156290:intron | 60.0% | |
| ! | TTCGCCGGAGGAGTGTGATG+AGG | - | chr7_4:44593959-44593978 | Msa1156290:intron | 60.0% |
| ! | TTTGCGAGGGAGGCACGAGT+TGG | - | chr7_4:44596714-44596733 | Msa1156290:intron | 60.0% |
| ACCTGTCTAGCAACCGCCAG+CGG | + | chr7_4:44598029-44598048 | None:intergenic | 60.0% | |
| GGGAGAGGCAGCAACTCACG+AGG | - | chr7_4:44594360-44594379 | Msa1156290:intron | 65.0% | |
| ACCGCTGGCGGTTGCTAGAC+AGG | - | chr7_4:44598025-44598044 | Msa1156290:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 44593597 | 44599468 | 44593597 | ID=Msa1156290;Name=Msa1156290 |
| chr7_4 | mRNA | 44593597 | 44599468 | 44593597 | ID=Msa1156290-mRNA-1;Parent=Msa1156290;Name=Msa1156290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.83|0.61|1|1|1|13|88|721 |
| chr7_4 | exon | 44593597 | 44593770 | 44593597 | ID=Msa1156290-mRNA-1:exon:11515;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44594478 | 44594593 | 44594478 | ID=Msa1156290-mRNA-1:exon:11514;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44595019 | 44595101 | 44595019 | ID=Msa1156290-mRNA-1:exon:11513;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44595207 | 44595353 | 44595207 | ID=Msa1156290-mRNA-1:exon:11512;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44595777 | 44595968 | 44595777 | ID=Msa1156290-mRNA-1:exon:11511;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44596398 | 44596572 | 44596398 | ID=Msa1156290-mRNA-1:exon:11510;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44596661 | 44596725 | 44596661 | ID=Msa1156290-mRNA-1:exon:11509;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44597285 | 44597411 | 44597285 | ID=Msa1156290-mRNA-1:exon:11508;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44597926 | 44598018 | 44597926 | ID=Msa1156290-mRNA-1:exon:11507;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44598146 | 44598234 | 44598146 | ID=Msa1156290-mRNA-1:exon:11506;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44598310 | 44598456 | 44598310 | ID=Msa1156290-mRNA-1:exon:11505;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44598545 | 44598857 | 44598545 | ID=Msa1156290-mRNA-1:exon:11504;Parent=Msa1156290-mRNA-1 |
| chr7_4 | exon | 44598936 | 44599468 | 44598936 | ID=Msa1156290-mRNA-1:exon:11503;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44598936 | 44599468 | 44598936 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44598545 | 44598857 | 44598545 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44598310 | 44598456 | 44598310 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44598146 | 44598234 | 44598146 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44597926 | 44598018 | 44597926 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44597285 | 44597411 | 44597285 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44596661 | 44596725 | 44596661 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44596398 | 44596572 | 44596398 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44595777 | 44595968 | 44595777 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44595207 | 44595353 | 44595207 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44595019 | 44595101 | 44595019 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44594478 | 44594593 | 44594478 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | CDS | 44593685 | 44593770 | 44593685 | ID=Msa1156290-mRNA-1:cds;Parent=Msa1156290-mRNA-1 |
| chr7_4 | three_prime_UTR | 44593597 | 44593684 | 44593597 | ID=Msa1156290-mRNA-1:three_prime_utr;Parent=Msa1156290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
