Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0018650 | sp|Q9FVQ0|YUC10_ARATH | 47.606 | 376 | 197 | 0 | 8 | 383 | 5 | 380 | 1.73e-138 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa0018650 | 0.807934 | 3.965009e-50 | -8.615850e-47 |
Msa0015390 | Msa0018650 | 0.813972 | 1.952641e-51 | -8.615850e-47 |
Msa0017510 | Msa0018650 | 0.807113 | 5.922122e-50 | -8.615850e-47 |
Msa0018650 | Msa0021510 | 0.820988 | 5.126996e-53 | -8.615850e-47 |
Msa0018650 | Msa0035150 | 0.805234 | 1.473219e-49 | -8.615850e-47 |
Msa0018650 | Msa0062860 | 0.807134 | 5.863051e-50 | -8.615850e-47 |
Msa0018650 | Msa0067140 | 0.927987 | 5.451714e-92 | -8.615850e-47 |
Msa0018650 | Msa0078900 | 0.802748 | 4.841656e-49 | -8.615850e-47 |
Msa0018650 | Msa0079070 | 0.805952 | 1.040934e-49 | -8.615850e-47 |
Msa0018650 | Msa0105070 | 0.820772 | 5.748824e-53 | -8.615850e-47 |
Msa0018650 | Msa0112590 | 0.983203 | 4.169739e-157 | -8.615850e-47 |
Msa0018650 | Msa0114060 | 0.819875 | 9.232499e-53 | -8.615850e-47 |
Msa0018650 | Msa0131770 | 0.824938 | 6.155098e-54 | -8.615850e-47 |
Msa0018650 | Msa0137100 | 0.801206 | 1.004578e-48 | -8.615850e-47 |
Msa0018650 | Msa0142220 | 0.802049 | 6.745287e-49 | -8.615850e-47 |
Msa0018650 | Msa0157290 | 0.807373 | 5.218617e-50 | -8.615850e-47 |
Msa0018650 | Msa0158480 | 0.917032 | 8.698342e-86 | -8.615850e-47 |
Msa0018650 | Msa0165210 | 0.815086 | 1.106743e-51 | -8.615850e-47 |
Msa0018650 | Msa0171540 | 0.800695 | 1.277613e-48 | -8.615850e-47 |
Msa0018650 | Msa0178930 | 0.801734 | 7.828722e-49 | -8.615850e-47 |
Msa0018650 | Msa0178960 | 0.835042 | 2.112481e-56 | -8.615850e-47 |
Msa0018650 | Msa0178970 | 0.821185 | 4.617218e-53 | -8.615850e-47 |
Msa0018650 | Msa0180500 | 0.829632 | 4.619070e-55 | -8.615850e-47 |
Msa0018650 | Msa0210450 | 0.802592 | 5.213809e-49 | -8.615850e-47 |
Msa0018650 | Msa0211150 | 0.800921 | 1.148640e-48 | -8.615850e-47 |
Msa0018650 | Msa0212990 | 0.809961 | 1.460740e-50 | -8.615850e-47 |
Msa0018650 | Msa0215320 | -0.813139 | 2.976654e-51 | -8.615850e-47 |
Msa0018650 | Msa0223010 | 0.802847 | 4.620580e-49 | -8.615850e-47 |
Msa0018650 | Msa0226890 | 0.801855 | 7.394156e-49 | -8.615850e-47 |
Msa0018650 | Msa0233300 | 0.819967 | 8.792140e-53 | -8.615850e-47 |
Msa0018650 | Msa0251320 | 0.810635 | 1.045057e-50 | -8.615850e-47 |
Msa0018650 | Msa0251640 | 0.805735 | 1.156660e-49 | -8.615850e-47 |
Msa0018650 | Msa0262510 | 0.805361 | 1.385180e-49 | -8.615850e-47 |
Msa0018650 | Msa0278110 | 0.802441 | 5.601966e-49 | -8.615850e-47 |
Msa0018650 | Msa0278190 | 0.806559 | 7.756233e-50 | -8.615850e-47 |
Msa0018650 | Msa0288100 | 0.811495 | 6.805431e-51 | -8.615850e-47 |
Msa0018650 | Msa0305190 | 0.814224 | 1.718175e-51 | -8.615850e-47 |
Msa0018650 | Msa0307540 | 0.807617 | 4.631282e-50 | -8.615850e-47 |
Msa0018650 | Msa0329190 | 0.806987 | 6.298707e-50 | -8.615850e-47 |
Msa0018650 | Msa0330340 | 0.807146 | 5.827345e-50 | -8.615850e-47 |
Msa0018650 | Msa0337900 | 0.807081 | 6.015556e-50 | -8.615850e-47 |
Msa0018650 | Msa0339620 | 0.811331 | 7.384519e-51 | -8.615850e-47 |
Msa0018650 | Msa0340450 | 0.805517 | 1.284632e-49 | -8.615850e-47 |
Msa0018650 | Msa0355220 | 0.808867 | 2.508410e-50 | -8.615850e-47 |
Msa0018650 | Msa0357340 | 0.808514 | 2.983717e-50 | -8.615850e-47 |
Msa0018650 | Msa0363790 | 0.807470 | 4.975548e-50 | -8.615850e-47 |
Msa0018650 | Msa0371730 | 0.801551 | 8.537030e-49 | -8.615850e-47 |
Msa0018650 | Msa0376590 | 0.805071 | 1.593436e-49 | -8.615850e-47 |
Msa0018650 | Msa0388960 | 0.801147 | 1.032897e-48 | -8.615850e-47 |
Msa0018650 | Msa0391430 | 0.811113 | 8.236443e-51 | -8.615850e-47 |
Msa0018650 | Msa0395790 | 0.808570 | 2.902712e-50 | -8.615850e-47 |
Msa0018650 | Msa0402290 | 0.815156 | 1.067742e-51 | -8.615850e-47 |
Msa0018650 | Msa0409690 | 0.806050 | 9.929081e-50 | -8.615850e-47 |
Msa0018650 | Msa0414230 | 0.806270 | 8.923914e-50 | -8.615850e-47 |
Msa0018650 | Msa0416650 | 0.832651 | 8.370137e-56 | -8.615850e-47 |
Msa0018650 | Msa0424320 | 0.835838 | 1.328720e-56 | -8.615850e-47 |
Msa0018650 | Msa0435230 | 0.812286 | 4.575256e-51 | -8.615850e-47 |
Msa0018650 | Msa0436780 | 0.812653 | 3.804117e-51 | -8.615850e-47 |
Msa0018650 | Msa0440750 | 0.808942 | 2.416998e-50 | -8.615850e-47 |
Msa0018650 | Msa0443260 | 0.803924 | 2.762882e-49 | -8.615850e-47 |
Msa0018650 | Msa0444130 | 0.802460 | 5.550609e-49 | -8.615850e-47 |
Msa0018650 | Msa0444750 | -0.819561 | 1.088458e-52 | -8.615850e-47 |
Msa0018650 | Msa0464680 | 0.801873 | 7.333081e-49 | -8.615850e-47 |
Msa0018650 | Msa0479340 | 0.820789 | 5.696932e-53 | -8.615850e-47 |
Msa0018650 | Msa0483850 | 0.808369 | 3.203550e-50 | -8.615850e-47 |
Msa0018650 | Msa0488560 | 0.812361 | 4.407242e-51 | -8.615850e-47 |
Msa0018650 | Msa0495330 | 0.814304 | 1.649075e-51 | -8.615850e-47 |
Msa0018650 | Msa0502340 | 0.806463 | 8.125699e-50 | -8.615850e-47 |
Msa0018650 | Msa0512750 | 0.819148 | 1.352408e-52 | -8.615850e-47 |
Msa0018650 | Msa0512900 | 0.803624 | 3.190348e-49 | -8.615850e-47 |
Msa0018650 | Msa0523940 | 0.851395 | 9.124372e-61 | -8.615850e-47 |
Msa0018650 | Msa0532350 | 0.808422 | 3.122201e-50 | -8.615850e-47 |
Msa0018650 | Msa0562440 | 0.841238 | 5.365461e-58 | -8.615850e-47 |
Msa0018650 | Msa0571630 | 0.801889 | 7.277147e-49 | -8.615850e-47 |
Msa0018650 | Msa0585230 | 0.814539 | 1.463702e-51 | -8.615850e-47 |
Msa0018650 | Msa0598780 | 0.808958 | 2.398214e-50 | -8.615850e-47 |
Msa0018650 | Msa0641670 | 0.826134 | 3.203951e-54 | -8.615850e-47 |
Msa0018650 | Msa0647170 | 0.813527 | 2.447297e-51 | -8.615850e-47 |
Msa0018650 | Msa0650630 | 0.810257 | 1.261215e-50 | -8.615850e-47 |
Msa0018650 | Msa0657970 | 0.807607 | 4.654403e-50 | -8.615850e-47 |
Msa0018650 | Msa0661650 | 0.834936 | 2.245820e-56 | -8.615850e-47 |
Msa0018650 | Msa0673450 | 0.804021 | 2.638506e-49 | -8.615850e-47 |
Msa0018650 | Msa0673460 | 0.816910 | 4.334817e-52 | -8.615850e-47 |
Msa0018650 | Msa0681250 | 0.801642 | 8.177852e-49 | -8.615850e-47 |
Msa0018650 | Msa0681270 | 0.807969 | 3.897455e-50 | -8.615850e-47 |
Msa0018650 | Msa0688270 | 0.800367 | 1.489708e-48 | -8.615850e-47 |
Msa0018650 | Msa0688480 | 0.800182 | 1.624884e-48 | -8.615850e-47 |
Msa0018650 | Msa0693380 | 0.805328 | 1.407387e-49 | -8.615850e-47 |
Msa0018650 | Msa0701010 | 0.837671 | 4.529649e-57 | -8.615850e-47 |
Msa0018650 | Msa0728630 | 0.803475 | 3.424324e-49 | -8.615850e-47 |
Msa0018650 | Msa0731940 | 0.827077 | 1.909061e-54 | -8.615850e-47 |
Msa0018650 | Msa0735170 | 0.838110 | 3.492617e-57 | -8.615850e-47 |
Msa0018650 | Msa0743720 | 0.812120 | 4.973599e-51 | -8.615850e-47 |
Msa0018650 | Msa0753720 | 0.814694 | 1.352203e-51 | -8.615850e-47 |
Msa0018650 | Msa0760130 | 0.818990 | 1.469017e-52 | -8.615850e-47 |
Msa0018650 | Msa0766630 | 0.823594 | 1.273362e-53 | -8.615850e-47 |
Msa0018650 | Msa0767760 | 0.811351 | 7.312327e-51 | -8.615850e-47 |
Msa0018650 | Msa0768290 | 0.815592 | 8.544076e-52 | -8.615850e-47 |
Msa0018650 | Msa0768370 | 0.821412 | 4.093069e-53 | -8.615850e-47 |
Msa0018650 | Msa0797170 | 0.801841 | 7.442486e-49 | -8.615850e-47 |
Msa0018650 | Msa0807370 | 0.815126 | 1.084722e-51 | -8.615850e-47 |
Msa0018650 | Msa0808080 | 0.810132 | 1.341899e-50 | -8.615850e-47 |
Msa0018650 | Msa0810220 | 0.808558 | 2.919829e-50 | -8.615850e-47 |
Msa0018650 | Msa0820850 | 0.815919 | 7.224155e-52 | -8.615850e-47 |
Msa0018650 | Msa0832340 | 0.820598 | 6.303592e-53 | -8.615850e-47 |
Msa0018650 | Msa0842650 | 0.801010 | 1.101359e-48 | -8.615850e-47 |
Msa0018650 | Msa0844490 | 0.818445 | 1.953044e-52 | -8.615850e-47 |
Msa0018650 | Msa0844570 | 0.811289 | 7.540482e-51 | -8.615850e-47 |
Msa0018650 | Msa0849030 | 0.842990 | 1.844608e-58 | -8.615850e-47 |
Msa0018650 | Msa0857640 | 0.822153 | 2.758551e-53 | -8.615850e-47 |
Msa0018650 | Msa0861130 | 0.820101 | 8.195042e-53 | -8.615850e-47 |
Msa0018650 | Msa0877250 | 0.839762 | 1.304777e-57 | -8.615850e-47 |
Msa0018650 | Msa0880140 | 0.802910 | 4.483210e-49 | -8.615850e-47 |
Msa0018650 | Msa0882690 | 0.805486 | 1.304347e-49 | -8.615850e-47 |
Msa0018650 | Msa0884470 | 0.813706 | 2.235075e-51 | -8.615850e-47 |
Msa0018650 | Msa0885280 | 0.808273 | 3.358124e-50 | -8.615850e-47 |
Msa0018650 | Msa0892080 | 0.808935 | 2.424973e-50 | -8.615850e-47 |
Msa0018650 | Msa0897330 | 0.823313 | 1.481244e-53 | -8.615850e-47 |
Msa0018650 | Msa0899430 | 0.827313 | 1.676477e-54 | -8.615850e-47 |
Msa0018650 | Msa0899450 | 0.838479 | 2.807075e-57 | -8.615850e-47 |
Msa0018650 | Msa0900020 | 0.802068 | 6.683941e-49 | -8.615850e-47 |
Msa0018650 | Msa0907260 | 0.820118 | 8.119623e-53 | -8.615850e-47 |
Msa0018650 | Msa0909140 | 0.807753 | 4.332345e-50 | -8.615850e-47 |
Msa0018650 | Msa0927380 | 0.841272 | 5.253761e-58 | -8.615850e-47 |
Msa0018650 | Msa0933100 | 0.814350 | 1.610816e-51 | -8.615850e-47 |
Msa0018650 | Msa0942200 | 0.810143 | 1.334506e-50 | -8.615850e-47 |
Msa0018650 | Msa0947660 | 0.801139 | 1.036792e-48 | -8.615850e-47 |
Msa0018650 | Msa0948320 | 0.801487 | 8.796403e-49 | -8.615850e-47 |
Msa0018650 | Msa0953120 | 0.833708 | 4.565226e-56 | -8.615850e-47 |
Msa0018650 | Msa0954910 | 0.801865 | 7.360055e-49 | -8.615850e-47 |
Msa0018650 | Msa0956270 | 0.817689 | 2.894519e-52 | -8.615850e-47 |
Msa0018650 | Msa0958550 | 0.814830 | 1.261312e-51 | -8.615850e-47 |
Msa0018650 | Msa0964900 | 0.836155 | 1.104218e-56 | -8.615850e-47 |
Msa0018650 | Msa0967280 | 0.819929 | 8.972386e-53 | -8.615850e-47 |
Msa0018650 | Msa0969520 | 0.839677 | 1.373113e-57 | -8.615850e-47 |
Msa0018650 | Msa0969810 | 0.804286 | 2.323016e-49 | -8.615850e-47 |
Msa0018650 | Msa0974080 | 0.830000 | 3.756368e-55 | -8.615850e-47 |
Msa0018650 | Msa0976670 | 0.814910 | 1.211007e-51 | -8.615850e-47 |
Msa0018650 | Msa0983090 | 0.802309 | 5.964605e-49 | -8.615850e-47 |
Msa0018650 | Msa0991830 | 0.824978 | 6.020700e-54 | -8.615850e-47 |
Msa0018650 | Msa0998690 | 0.807073 | 6.041256e-50 | -8.615850e-47 |
Msa0018650 | Msa0999220 | 0.808948 | 2.409486e-50 | -8.615850e-47 |
Msa0018650 | Msa1000250 | 0.802161 | 6.397637e-49 | -8.615850e-47 |
Msa0018650 | Msa1000860 | 0.820040 | 8.459723e-53 | -8.615850e-47 |
Msa0018650 | Msa1000880 | 0.815765 | 7.818901e-52 | -8.615850e-47 |
Msa0018650 | Msa1000890 | 0.843027 | 1.803301e-58 | -8.615850e-47 |
Msa0018650 | Msa1000900 | 0.841201 | 5.483813e-58 | -8.615850e-47 |
Msa0018650 | Msa1002810 | 0.800983 | 1.115590e-48 | -8.615850e-47 |
Msa0018650 | Msa1003620 | 0.830409 | 2.985685e-55 | -8.615850e-47 |
Msa0018650 | Msa1014540 | 0.857692 | 1.372305e-62 | -8.615850e-47 |
Msa0018650 | Msa1014990 | 0.828583 | 8.293449e-55 | -8.615850e-47 |
Msa0018650 | Msa1015490 | 0.803242 | 3.827804e-49 | -8.615850e-47 |
Msa0018650 | Msa1016320 | 0.804088 | 2.555427e-49 | -8.615850e-47 |
Msa0018650 | Msa1019000 | 0.813237 | 2.834055e-51 | -8.615850e-47 |
Msa0018650 | Msa1019150 | 0.821145 | 4.717103e-53 | -8.615850e-47 |
Msa0018650 | Msa1028230 | 0.819061 | 1.415203e-52 | -8.615850e-47 |
Msa0018650 | Msa1030970 | 0.811426 | 7.044567e-51 | -8.615850e-47 |
Msa0018650 | Msa1039800 | 0.809324 | 2.002061e-50 | -8.615850e-47 |
Msa0018650 | Msa1046460 | 0.821950 | 3.074113e-53 | -8.615850e-47 |
Msa0018650 | Msa1054990 | 0.805272 | 1.445861e-49 | -8.615850e-47 |
Msa0018650 | Msa1075220 | -0.837343 | 5.495763e-57 | -8.615850e-47 |
Msa0018650 | Msa1075540 | 0.808575 | 2.895087e-50 | -8.615850e-47 |
Msa0018650 | Msa1075650 | 0.827770 | 1.302259e-54 | -8.615850e-47 |
Msa0018650 | Msa1082500 | 0.820419 | 6.929437e-53 | -8.615850e-47 |
Msa0018650 | Msa1082580 | 0.821875 | 3.198835e-53 | -8.615850e-47 |
Msa0018650 | Msa1083840 | 0.816766 | 4.669010e-52 | -8.615850e-47 |
Msa0018650 | Msa1085740 | 0.807460 | 4.999384e-50 | -8.615850e-47 |
Msa0018650 | Msa1090260 | 0.815139 | 1.077225e-51 | -8.615850e-47 |
Msa0018650 | Msa1100050 | 0.814041 | 1.885585e-51 | -8.615850e-47 |
Msa0018650 | Msa1104090 | 0.809247 | 2.079818e-50 | -8.615850e-47 |
Msa0018650 | Msa1112300 | 0.818914 | 1.528560e-52 | -8.615850e-47 |
Msa0018650 | Msa1113170 | 0.806724 | 7.157382e-50 | -8.615850e-47 |
Msa0018650 | Msa1116130 | -0.812852 | 3.441338e-51 | -8.615850e-47 |
Msa0018650 | Msa1121480 | 0.804725 | 1.882170e-49 | -8.615850e-47 |
Msa0018650 | Msa1121490 | 0.831608 | 1.516182e-55 | -8.615850e-47 |
Msa0018650 | Msa1137570 | 0.845311 | 4.395344e-59 | -8.615850e-47 |
Msa0018650 | Msa1139000 | -0.826886 | 2.120702e-54 | -8.615850e-47 |
Msa0018650 | Msa1142020 | 0.804616 | 1.983182e-49 | -8.615850e-47 |
Msa0018650 | Msa1147740 | 0.832298 | 1.024074e-55 | -8.615850e-47 |
Msa0018650 | Msa1154280 | 0.803693 | 3.085791e-49 | -8.615850e-47 |
Msa0018650 | Msa1156020 | 0.805705 | 1.173439e-49 | -8.615850e-47 |
Msa0018650 | Msa1156290 | 0.801281 | 9.697240e-49 | -8.615850e-47 |
Msa0018650 | Msa1162550 | -0.838859 | 2.239170e-57 | -8.615850e-47 |
Msa0018650 | Msa1174040 | 0.812671 | 3.769682e-51 | -8.615850e-47 |
Msa0018650 | Msa1174910 | 0.810853 | 9.374080e-51 | -8.615850e-47 |
Msa0018650 | Msa1185110 | 0.805839 | 1.099624e-49 | -8.615850e-47 |
Msa0018650 | Msa1186950 | -0.812014 | 5.245435e-51 | -8.615850e-47 |
Msa0018650 | Msa1195190 | 0.804367 | 2.235542e-49 | -8.615850e-47 |
Msa0018650 | Msa1205020 | 0.804832 | 1.787591e-49 | -8.615850e-47 |
Msa0018650 | Msa1207220 | 0.814686 | 1.357872e-51 | -8.615850e-47 |
Msa0018650 | Msa1225130 | 0.818230 | 2.184841e-52 | -8.615850e-47 |
Msa0018650 | Msa1228590 | 0.828743 | 7.585683e-55 | -8.615850e-47 |
Msa0018650 | Msa1233890 | 0.809964 | 1.458362e-50 | -8.615850e-47 |
Msa0018650 | Msa1249490 | 0.811227 | 7.781060e-51 | -8.615850e-47 |
Msa0018650 | Msa1253020 | 0.817353 | 3.446160e-52 | -8.615850e-47 |
Msa0018650 | Msa1276890 | 0.829965 | 3.831117e-55 | -8.615850e-47 |
Msa0018650 | Msa1277660 | 0.816884 | 4.392939e-52 | -8.615850e-47 |
Msa0018650 | Msa1282580 | -0.803683 | 3.100853e-49 | -8.615850e-47 |
Msa0018650 | Msa1283860 | 0.814626 | 1.400050e-51 | -8.615850e-47 |
Msa0018650 | Msa1284680 | 0.833259 | 5.910763e-56 | -8.615850e-47 |
Msa0018650 | Msa1286800 | 0.822920 | 1.829568e-53 | -8.615850e-47 |
Msa0018650 | Msa1287190 | 0.808737 | 2.673173e-50 | -8.615850e-47 |
Msa0018650 | Msa1306850 | 0.801843 | 7.437767e-49 | -8.615850e-47 |
Msa0018650 | Msa1353470 | 0.845501 | 3.905566e-59 | -8.615850e-47 |
Msa0018650 | Msa1359040 | 0.813585 | 2.375376e-51 | -8.615850e-47 |
Msa0018650 | Msa1366810 | 0.839551 | 1.481023e-57 | -8.615850e-47 |
Msa0018650 | Msa1372760 | 0.815009 | 1.151107e-51 | -8.615850e-47 |
Msa0018650 | Msa1388930 | 0.800729 | 1.257108e-48 | -8.615850e-47 |
Msa0018650 | Msa1392240 | 0.809793 | 1.587165e-50 | -8.615850e-47 |
Msa0018650 | Msa1397860 | 0.801971 | 6.998381e-49 | -8.615850e-47 |
Msa0018650 | Msa1403480 | 0.805363 | 1.384167e-49 | -8.615850e-47 |
Msa0018650 | Msa1410690 | 0.801879 | 7.309723e-49 | -8.615850e-47 |
Msa0018650 | Msa1411020 | 0.808461 | 3.062932e-50 | -8.615850e-47 |
Msa0018650 | Msa1424290 | 0.802998 | 4.299707e-49 | -8.615850e-47 |
Msa0018650 | Msa1427230 | 0.818251 | 2.161139e-52 | -8.615850e-47 |
Msa0018650 | Msa1434350 | 0.806784 | 6.954066e-50 | -8.615850e-47 |
Msa0018650 | Msa1435270 | 0.815768 | 7.806789e-52 | -8.615850e-47 |
Msa0018650 | Msa1436650 | 0.808701 | 2.721793e-50 | -8.615850e-47 |
Msa0018650 | Msa1439320 | 0.806758 | 7.041334e-50 | -8.615850e-47 |
Msa0018650 | Msa1440560 | 0.806481 | 8.056874e-50 | -8.615850e-47 |
Msa0018650 | Msa1448640 | 0.813676 | 2.268401e-51 | -8.615850e-47 |
Msa0018650 | Msa1451620 | -0.807231 | 5.590723e-50 | -8.615850e-47 |
Msa0018650 | Msa1460830 | 0.818417 | 1.981991e-52 | -8.615850e-47 |
Msa0018650 | Msa1466540 | 0.804494 | 2.103334e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0018650 | MtrunA17_Chr7g0268611 | 96.606 | 383 | 13 | 0 | 1 | 383 | 1 | 383 | 0.0 | 770 |
Msa0018650 | MtrunA17_Chr7g0268621 | 67.647 | 374 | 119 | 2 | 8 | 380 | 6 | 378 | 0.0 | 538 |
Msa0018650 | MtrunA17_Chr8g0350371 | 49.322 | 369 | 187 | 0 | 8 | 376 | 6 | 374 | 1.09e-137 | 397 |
Msa0018650 | MtrunA17_Chr5g0412881 | 50.136 | 369 | 184 | 0 | 8 | 376 | 6 | 374 | 6.83e-137 | 395 |
Msa0018650 | MtrunA17_Chr3g0125701 | 49.864 | 369 | 185 | 0 | 8 | 376 | 7 | 375 | 4.87e-133 | 386 |
Msa0018650 | MtrunA17_Chr3g0125711 | 49.051 | 369 | 188 | 0 | 8 | 376 | 7 | 375 | 1.04e-130 | 380 |
Msa0018650 | MtrunA17_Chr3g0125691 | 49.322 | 369 | 187 | 0 | 8 | 376 | 7 | 375 | 1.34e-130 | 380 |
Msa0018650 | MtrunA17_Chr3g0139441 | 45.910 | 379 | 199 | 2 | 9 | 382 | 40 | 417 | 5.16e-122 | 359 |
Msa0018650 | MtrunA17_Chr6g0485621 | 44.648 | 383 | 203 | 4 | 9 | 383 | 33 | 414 | 1.26e-119 | 353 |
Msa0018650 | MtrunA17_Chr1g0182991 | 45.263 | 380 | 198 | 5 | 9 | 382 | 26 | 401 | 1.39e-119 | 353 |
Msa0018650 | MtrunA17_Chr1g0147221 | 46.296 | 378 | 196 | 3 | 9 | 381 | 43 | 418 | 1.48e-119 | 353 |
Msa0018650 | MtrunA17_Chr7g0262591 | 43.272 | 379 | 203 | 4 | 9 | 382 | 25 | 396 | 5.52e-116 | 343 |
Msa0018650 | MtrunA17_Chr1g0148801 | 43.421 | 380 | 204 | 4 | 9 | 383 | 17 | 390 | 8.03e-115 | 340 |
Msa0018650 | MtrunA17_Chr1g0169111 | 44.800 | 375 | 198 | 4 | 9 | 376 | 103 | 475 | 8.82e-115 | 343 |
Msa0018650 | MtrunA17_Chr7g0262471 | 40.193 | 311 | 174 | 4 | 77 | 382 | 214 | 517 | 1.38e-78 | 251 |
Msa0018650 | MtrunA17_Chr4g0025641 | 51.000 | 200 | 98 | 0 | 8 | 207 | 16 | 215 | 6.57e-70 | 219 |
Msa0018650 | MtrunA17_Chr4g0025651 | 45.882 | 170 | 91 | 1 | 207 | 376 | 1 | 169 | 7.60e-47 | 158 |
Msa0018650 | MtrunA17_Chr3g0129991 | 46.154 | 117 | 63 | 0 | 68 | 184 | 3 | 119 | 2.70e-33 | 120 |
Msa0018650 | MtrunA17_Chr8g0352481 | 25.957 | 235 | 140 | 5 | 7 | 214 | 3 | 230 | 1.07e-15 | 78.2 |
Msa0018650 | MtrunA17_Chr8g0352461 | 24.686 | 239 | 147 | 6 | 7 | 217 | 3 | 236 | 2.30e-15 | 77.4 |
Msa0018650 | MtrunA17_Chr3g0091441 | 25.506 | 247 | 137 | 6 | 4 | 214 | 9 | 244 | 5.04e-14 | 73.2 |
Msa0018650 | MtrunA17_Chr3g0130001 | 53.488 | 43 | 20 | 0 | 4 | 46 | 2 | 44 | 6.17e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0018650 | AT1G48910.1 | 47.606 | 376 | 197 | 0 | 8 | 383 | 5 | 380 | 1.76e-139 | 402 |
Msa0018650 | AT1G21430.1 | 45.692 | 383 | 202 | 5 | 1 | 380 | 1 | 380 | 1.46e-123 | 362 |
Msa0018650 | AT1G04610.1 | 46.194 | 381 | 195 | 5 | 9 | 381 | 38 | 416 | 1.31e-121 | 359 |
Msa0018650 | AT4G13260.1 | 45.040 | 373 | 199 | 2 | 9 | 376 | 29 | 400 | 8.64e-119 | 351 |
Msa0018650 | AT5G25620.1 | 45.669 | 381 | 197 | 4 | 9 | 382 | 33 | 410 | 1.47e-117 | 348 |
Msa0018650 | AT5G25620.2 | 45.669 | 381 | 197 | 4 | 9 | 382 | 33 | 410 | 2.59e-117 | 348 |
Msa0018650 | AT5G43890.1 | 43.684 | 380 | 205 | 5 | 9 | 381 | 26 | 403 | 1.99e-116 | 345 |
Msa0018650 | AT1G04180.1 | 44.063 | 379 | 202 | 5 | 9 | 381 | 26 | 400 | 2.08e-115 | 342 |
Msa0018650 | AT4G28720.1 | 43.307 | 381 | 206 | 6 | 9 | 381 | 26 | 404 | 3.77e-115 | 342 |
Msa0018650 | AT4G32540.1 | 43.850 | 374 | 197 | 5 | 9 | 376 | 22 | 388 | 5.75e-114 | 338 |
Msa0018650 | AT4G32540.2 | 44.267 | 375 | 196 | 5 | 9 | 376 | 22 | 390 | 9.26e-114 | 338 |
Msa0018650 | AT5G11320.1 | 44.504 | 373 | 194 | 4 | 9 | 376 | 18 | 382 | 7.64e-112 | 333 |
Msa0018650 | AT2G33230.1 | 44.094 | 381 | 202 | 5 | 9 | 381 | 33 | 410 | 1.38e-108 | 325 |
Msa0018650 | AT5G11320.2 | 44.582 | 323 | 167 | 3 | 9 | 326 | 18 | 333 | 1.35e-95 | 290 |
Msa0018650 | AT4G13260.2 | 46.454 | 282 | 146 | 1 | 9 | 285 | 29 | 310 | 5.84e-93 | 281 |
Msa0018650 | AT4G13260.3 | 41.356 | 295 | 166 | 3 | 87 | 376 | 5 | 297 | 4.65e-78 | 243 |
Msa0018650 | AT1G62560.2 | 27.615 | 239 | 132 | 7 | 5 | 213 | 10 | 237 | 2.57e-16 | 80.5 |
Msa0018650 | AT1G62560.1 | 27.966 | 236 | 129 | 7 | 8 | 213 | 13 | 237 | 3.31e-16 | 80.5 |
Msa0018650 | AT1G65860.1 | 27.542 | 236 | 135 | 4 | 5 | 213 | 10 | 236 | 3.59e-16 | 80.1 |
Msa0018650 | AT1G12160.1 | 24.728 | 368 | 171 | 12 | 8 | 342 | 12 | 306 | 3.35e-14 | 74.3 |
Msa0018650 | AT1G12140.1 | 30.058 | 173 | 104 | 4 | 49 | 213 | 74 | 237 | 8.94e-14 | 72.8 |
Msa0018650 | AT1G12140.3 | 30.058 | 173 | 104 | 4 | 49 | 213 | 74 | 237 | 8.94e-14 | 72.8 |
Msa0018650 | AT5G07800.1 | 27.413 | 259 | 139 | 8 | 5 | 226 | 13 | 259 | 7.21e-13 | 70.1 |
Msa0018650 | AT1G62540.1 | 28.270 | 237 | 132 | 5 | 5 | 213 | 10 | 236 | 1.65e-12 | 68.9 |
Msa0018650 | AT5G61290.1 | 27.386 | 241 | 135 | 6 | 1 | 205 | 9 | 245 | 1.70e-12 | 68.9 |
Msa0018650 | AT1G62540.3 | 28.270 | 237 | 132 | 5 | 5 | 213 | 10 | 236 | 1.91e-12 | 68.9 |
Msa0018650 | AT1G62540.2 | 28.270 | 237 | 132 | 5 | 5 | 213 | 10 | 236 | 2.05e-12 | 68.9 |
Msa0018650 | AT1G62620.2 | 22.944 | 231 | 142 | 4 | 8 | 205 | 13 | 240 | 3.80e-12 | 67.8 |
Msa0018650 | AT1G62620.1 | 22.944 | 231 | 142 | 4 | 8 | 205 | 13 | 240 | 5.83e-12 | 67.4 |
Msa0018650 | AT1G12200.2 | 32.143 | 140 | 79 | 4 | 80 | 213 | 113 | 242 | 1.18e-11 | 66.2 |
Msa0018650 | AT1G12200.1 | 32.143 | 140 | 79 | 4 | 80 | 213 | 113 | 242 | 1.52e-11 | 66.2 |
Msa0018650 | AT1G12140.2 | 27.602 | 221 | 145 | 6 | 49 | 258 | 74 | 290 | 3.23e-11 | 65.1 |
Msa0018650 | AT1G62570.1 | 26.396 | 197 | 134 | 6 | 75 | 262 | 107 | 301 | 8.63e-11 | 63.5 |
Msa0018650 | AT5G45180.1 | 26.250 | 240 | 132 | 10 | 5 | 205 | 10 | 243 | 9.57e-11 | 63.5 |
Find 92 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCAAGGGGTATGCTGAATT+TGG | 0.142332 | 1_1:+31532930 | Msa0018650:CDS |
CTCTTCAACCCTTCAATTTC+AGG | 0.149369 | 1_1:-31532492 | None:intergenic |
TACGGGGATGTCACGAATTA+TGG | 0.154022 | 1_1:+31533024 | Msa0018650:CDS |
GTTGTTGGGTCTGGGAATTC+TGG | 0.176673 | 1_1:+31532585 | Msa0018650:CDS |
GTACTTGACCTTCATATAAA+AGG | 0.212639 | 1_1:-31533070 | None:intergenic |
TCAAGGGGTATGCTGAATTT+GGG | 0.240991 | 1_1:+31532931 | Msa0018650:CDS |
GTTGTTGGAGCAGGCCCTTC+TGG | 0.254075 | 1_1:+31532081 | Msa0018650:CDS |
CATGTTCTTGTTGTTGGGTC+TGG | 0.258715 | 1_1:+31532576 | Msa0018650:CDS |
GATGGTGATGCTTAGTAAAA+TGG | 0.306091 | 1_1:+31532999 | Msa0018650:CDS |
AATTAAGTCTCGAGAGTTAA+AGG | 0.307124 | 1_1:+31533131 | Msa0018650:CDS |
TGTATTGGGCCCCATATGTT+TGG | 0.314085 | 1_1:-31535040 | None:intergenic |
TCTCTTTCGAGGATTATATA+AGG | 0.314818 | 1_1:-31532141 | None:intergenic |
ATGCTTAGTAAAATGGTTTA+CGG | 0.339605 | 1_1:+31533006 | Msa0018650:CDS |
GAAGGTGAAGGCTAAGAATA+AGG | 0.345400 | 1_1:+31532395 | Msa0018650:CDS |
CAAGTTCTAATTCTTGTATT+GGG | 0.347155 | 1_1:-31535054 | None:intergenic |
GCAAGTTCTAATTCTTGTAT+TGG | 0.352121 | 1_1:-31535055 | None:intergenic |
AATGAAAGAGTGATAGTTGT+TGG | 0.360593 | 1_1:+31532066 | Msa0018650:CDS |
AAGTATAACCTCCAAACATA+TGG | 0.364262 | 1_1:+31535029 | Msa0018650:three_prime_UTR |
GGGAAAGTGATTCATTCAAC+TGG | 0.376100 | 1_1:+31532522 | Msa0018650:CDS |
GATGAACATGTTCTTGTTGT+TGG | 0.376175 | 1_1:+31532570 | Msa0018650:CDS |
TGCTTAGTAAAATGGTTTAC+GGG | 0.386664 | 1_1:+31533007 | Msa0018650:CDS |
ATGATGAAGGTTCTGAGAAA+TGG | 0.387033 | 1_1:+31532373 | Msa0018650:CDS |
ATCAACCCACAAGTGGCTTA+AGG | 0.388610 | 1_1:+31534287 | Msa0018650:CDS |
AGCCAAGTTACCCTATTCAT+TGG | 0.388713 | 1_1:+31534747 | Msa0018650:CDS |
ATGTTCTTGTTGTTGGGTCT+GGG | 0.391709 | 1_1:+31532577 | Msa0018650:CDS |
AAGGCTAAGAATAAGGATTC+TGG | 0.392445 | 1_1:+31532402 | Msa0018650:CDS |
CATTCAACTGGGTTTAAGAA+TGG | 0.393718 | 1_1:+31532534 | Msa0018650:CDS |
CCTTCAATTTCAGGTACAAA+AGG | 0.400011 | 1_1:-31532483 | None:intergenic |
CTATCAAGGAGAGGTTTCTA+TGG | 0.400558 | 1_1:+31534800 | Msa0018650:CDS |
ACGGGGATGTCACGAATTAT+GGG | 0.428718 | 1_1:+31533025 | Msa0018650:CDS |
TATATTGTGTTGGACTATCA+AGG | 0.438069 | 1_1:+31534786 | Msa0018650:CDS |
ATTCAACTGGGTTTAAGAAT+GGG | 0.438492 | 1_1:+31532535 | Msa0018650:CDS |
TAAGGATTCTGGTGAGGTTG+AGG | 0.446777 | 1_1:+31532413 | Msa0018650:CDS |
CTTAAGCATTCTATTTCAGC+TGG | 0.447488 | 1_1:-31534189 | None:intergenic |
ATGAATAGGGTAACTTGGCT+TGG | 0.450552 | 1_1:-31534744 | None:intergenic |
AAGGTTCCAACGTCAATAAT+AGG | 0.451735 | 1_1:-31533102 | None:intergenic |
TTCGAGGATTATATAAGGAA+TGG | 0.455797 | 1_1:-31532136 | None:intergenic |
TTCCAATGAATAGGGTAACT+TGG | 0.456789 | 1_1:-31534749 | None:intergenic |
TTCTGGCATGGAAATTGCAT+TGG | 0.469456 | 1_1:+31532602 | Msa0018650:CDS |
ATGAACATGTTCTTGTTGTT+GGG | 0.471420 | 1_1:+31532571 | Msa0018650:CDS |
TACTTGACCTTCATATAAAA+GGG | 0.473078 | 1_1:-31533069 | None:intergenic |
GCAAACCTTAAGCCACTTGT+GGG | 0.480163 | 1_1:-31534292 | None:intergenic |
ATTGGGCCCCATATGTTTGG+AGG | 0.485159 | 1_1:-31535037 | None:intergenic |
AGTATAACCTCCAAACATAT+GGG | 0.487162 | 1_1:+31535030 | Msa0018650:three_prime_UTR |
TGAATAGGGTAACTTGGCTT+GGG | 0.488661 | 1_1:-31534743 | None:intergenic |
GGATTATATAAGGAATGGAT+TGG | 0.489614 | 1_1:-31532131 | None:intergenic |
GAATACCATCATCATTCAAA+AGG | 0.492685 | 1_1:-31534721 | None:intergenic |
TCTGATGAAGTATTTGTCAA+TGG | 0.510851 | 1_1:+31532960 | Msa0018650:CDS |
CAAGGGGTATGCTGAATTTG+GGG | 0.511286 | 1_1:+31532932 | Msa0018650:CDS |
TGGGGTTGGTAGGCCTAGTG+AGG | 0.512474 | 1_1:+31533044 | Msa0018650:CDS |
GCTGAAATAGAATGCTTAAG+TGG | 0.513060 | 1_1:+31534192 | Msa0018650:CDS |
CTTGCTTCGAACAACGATTG+AGG | 0.514809 | 1_1:-31532649 | None:intergenic |
CGTTGATTAGATTTCAGTTG+AGG | 0.525399 | 1_1:+31534940 | Msa0018650:three_prime_UTR |
ATATAAAAGGGACCCTCACT+AGG | 0.526447 | 1_1:-31533057 | None:intergenic |
CTTCAATTTCAGGTACAAAA+GGG | 0.526666 | 1_1:-31532482 | None:intergenic |
TGCAAACCTTAAGCCACTTG+TGG | 0.528385 | 1_1:-31534293 | None:intergenic |
CTCAATCGTTGTTCGAAGCA+AGG | 0.531935 | 1_1:+31532650 | Msa0018650:CDS |
GGAATGTATGATGGAAAAGA+AGG | 0.532095 | 1_1:-31532261 | None:intergenic |
AAGTTACCCTATTCATTGGA+AGG | 0.536623 | 1_1:+31534751 | Msa0018650:CDS |
GTGGGTTGATCTCTTGAAGC+CGG | 0.536695 | 1_1:-31534274 | None:intergenic |
GAGAATGCAAAGTATGATGA+AGG | 0.540824 | 1_1:+31532360 | Msa0018650:CDS |
GGTGAGGTTGAGGAATATGA+AGG | 0.542585 | 1_1:+31532423 | Msa0018650:CDS |
AGGTTGAGGAATATGAAGGA+AGG | 0.551335 | 1_1:+31532427 | Msa0018650:CDS |
ATGTATGATGGAAAAGAAGG+TGG | 0.552215 | 1_1:-31532258 | None:intergenic |
GATGGAAAAGAAGGTGGGAA+TGG | 0.556044 | 1_1:-31532252 | None:intergenic |
GAAAATAAAGATCAAAGGAG+AGG | 0.566865 | 1_1:+31534991 | Msa0018650:three_prime_UTR |
AGAGTGATAGTTGTTGGAGC+AGG | 0.568437 | 1_1:+31532072 | Msa0018650:CDS |
TTTATGAAAATAAAGATCAA+AGG | 0.573792 | 1_1:+31534986 | Msa0018650:three_prime_UTR |
TCACGAATTATGGGGTTGGT+AGG | 0.576228 | 1_1:+31533034 | Msa0018650:CDS |
GTATTTGTCAATGGAGATGG+TGG | 0.579490 | 1_1:+31532969 | Msa0018650:CDS |
TGGGTCTGGGAATTCTGGCA+TGG | 0.586713 | 1_1:+31532590 | Msa0018650:CDS |
CGGGGATGTCACGAATTATG+GGG | 0.588744 | 1_1:+31533026 | Msa0018650:CDS |
GGGGTTGGTAGGCCTAGTGA+GGG | 0.589928 | 1_1:+31533045 | Msa0018650:CDS |
GGAAAGTGATTCATTCAACT+GGG | 0.594965 | 1_1:+31532523 | Msa0018650:CDS |
TGTATGATGGAAAAGAAGGT+GGG | 0.596307 | 1_1:-31532257 | None:intergenic |
AGTTACCCTATTCATTGGAA+GGG | 0.596925 | 1_1:+31534752 | Msa0018650:CDS |
GAAGTATTTGTCAATGGAGA+TGG | 0.597497 | 1_1:+31532966 | Msa0018650:CDS |
GCTGCTACTGAGAGACCAGA+AGG | 0.602816 | 1_1:-31532096 | None:intergenic |
GAAGGTGGGAATGGTTTGTG+AGG | 0.606122 | 1_1:-31532243 | None:intergenic |
TGTGTTGGACTATCAAGGAG+AGG | 0.616154 | 1_1:+31534791 | Msa0018650:CDS |
GGAGATGGTGGATTTAGTGA+TGG | 0.618594 | 1_1:+31532981 | Msa0018650:CDS |
TTCTGAGAAATGGAAGGTGA+AGG | 0.623363 | 1_1:+31532383 | Msa0018650:CDS |
GATGTCACGAATTATGGGGT+TGG | 0.629113 | 1_1:+31533030 | Msa0018650:CDS |
TCAACTGTTCTGTGATACAG+AGG | 0.635504 | 1_1:-31532339 | None:intergenic |
GCATTGGATCTTATCAACCA+TGG | 0.635858 | 1_1:+31532618 | Msa0018650:CDS |
AAGTATCCTATTATTGACGT+TGG | 0.642218 | 1_1:+31533096 | Msa0018650:CDS |
TCAAGAGATCAACCCACAAG+TGG | 0.648193 | 1_1:+31534280 | Msa0018650:CDS |
GCTTAGTAAAATGGTTTACG+GGG | 0.650434 | 1_1:+31533008 | Msa0018650:CDS |
CTGCTACTGAGAGACCAGAA+GGG | 0.656151 | 1_1:-31532095 | None:intergenic |
TAAGAATAAGGATTCTGGTG+AGG | 0.661843 | 1_1:+31532407 | Msa0018650:CDS |
GTATAACCTCCAAACATATG+GGG | 0.683885 | 1_1:+31535031 | Msa0018650:three_prime_UTR |
TGAAGGTTCTGAGAAATGGA+AGG | 0.688803 | 1_1:+31532377 | Msa0018650:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAAATTTAAAAAAAA+AGG | - | chr1_1:31533727-31533746 | None:intergenic | 0.0% |
!! | TAGAATAAATATATAATTGA+CGG | + | chr1_1:31532740-31532759 | Msa0018650:intron | 10.0% |
!! | AAAATAAATAATATAAATGC+AGG | + | chr1_1:31532897-31532916 | Msa0018650:intron | 10.0% |
!!! | TTGATTTTAATGATAATTTA+TGG | - | chr1_1:31533258-31533277 | None:intergenic | 10.0% |
!!! | TATATTTTTCATATCATTAA+AGG | + | chr1_1:31533778-31533797 | Msa0018650:intron | 10.0% |
!! | AAAAAAAAAAAAACATGATA+AGG | - | chr1_1:31534524-31534543 | None:intergenic | 10.0% |
!!! | TAAACTAATTAATTATCTTT+TGG | + | chr1_1:31534684-31534703 | Msa0018650:intron | 10.0% |
!!! | TATTGTAAAAACTTTTCTTT+AGG | - | chr1_1:31532285-31532304 | None:intergenic | 15.0% |
!! | AGAATAAATATATAATTGAC+GGG | + | chr1_1:31532741-31532760 | Msa0018650:intron | 15.0% |
!! | ATGTATTCAAGTATAATTTA+AGG | - | chr1_1:31533290-31533309 | None:intergenic | 15.0% |
!! | AAAATAAAGGATTAAATTGA+TGG | + | chr1_1:31533331-31533350 | Msa0018650:intron | 15.0% |
!!! | TATTTGACTTTAATAGTTTA+AGG | + | chr1_1:31533378-31533397 | Msa0018650:intron | 15.0% |
!! | AACAAATTTATTTAAGTGAA+AGG | + | chr1_1:31533913-31533932 | Msa0018650:intron | 15.0% |
!!! | ATATCATTTTACTAAAAAGA+TGG | + | chr1_1:31533960-31533979 | Msa0018650:intron | 15.0% |
!!! | CAAAAAAGAATAGTTTTTTT+AGG | + | chr1_1:31534551-31534570 | Msa0018650:intron | 15.0% |
!!! | TAATTAATTATCTTTTGGTA+GGG | + | chr1_1:31534689-31534708 | Msa0018650:intron | 15.0% |
!! | TTTATGAAAATAAAGATCAA+AGG | + | chr1_1:31534986-31535005 | Msa0018650:three_prime_UTR | 15.0% |
!! | ATTAAAAAGTGAATAAATTG+TGG | - | chr1_1:31535082-31535101 | None:intergenic | 15.0% |
!!! | CATATATCAATTTATTTTGA+CGG | - | chr1_1:31535117-31535136 | None:intergenic | 15.0% |
!! | ACAAAAAAGAGAAGAAATAA+TGG | + | chr1_1:31532035-31532054 | Msa0018650:exon | 20.0% |
!! | TATACTTGAATACATCAATT+TGG | + | chr1_1:31533295-31533314 | Msa0018650:intron | 20.0% |
!! | TCCATAAACAAGTAAAATAA+AGG | + | chr1_1:31533318-31533337 | Msa0018650:intron | 20.0% |
!!! | TCCTTTATTTTACTTGTTTA+TGG | - | chr1_1:31533322-31533341 | None:intergenic | 20.0% |
!!! | TTCAGAAGATTTTTTTTTGA+GGG | - | chr1_1:31533528-31533547 | None:intergenic | 20.0% |
!!! | TTTCAGAAGATTTTTTTTTG+AGG | - | chr1_1:31533529-31533548 | None:intergenic | 20.0% |
!! | AGAATGACATATATTTCAAT+AGG | - | chr1_1:31533641-31533660 | None:intergenic | 20.0% |
!! | ATTGAAATATATGTCATTCT+AGG | + | chr1_1:31533641-31533660 | Msa0018650:intron | 20.0% |
!! | TACCTAAAATAACATTTAGA+TGG | + | chr1_1:31533874-31533893 | Msa0018650:intron | 20.0% |
!! | ACCTAAAATAACATTTAGAT+GGG | + | chr1_1:31533875-31533894 | Msa0018650:intron | 20.0% |
!! | TAATGTATGTTACATGAAAA+TGG | + | chr1_1:31534599-31534618 | Msa0018650:intron | 20.0% |
!! | AATGTATGTTACATGAAAAT+GGG | + | chr1_1:31534600-31534619 | Msa0018650:intron | 20.0% |
!!! | CTAATTAATTATCTTTTGGT+AGG | + | chr1_1:31534688-31534707 | Msa0018650:intron | 20.0% |
!! | AAAAATGGTTTATATTGTGT+TGG | + | chr1_1:31534776-31534795 | Msa0018650:CDS | 20.0% |
!!! | ACACATTTTAATCACATAAT+TGG | - | chr1_1:31535155-31535174 | None:intergenic | 20.0% |
!!! | AAAATTGTTTTGCATCACTA+TGG | + | chr1_1:31532163-31532182 | Msa0018650:CDS | 25.0% |
!!! | TTTTCTTTAGGAATGTATGA+TGG | - | chr1_1:31532273-31532292 | None:intergenic | 25.0% |
! | ATGCTTAGTAAAATGGTTTA+CGG | + | chr1_1:31533006-31533025 | Msa0018650:CDS | 25.0% |
! | TACTTGACCTTCATATAAAA+GGG | - | chr1_1:31533072-31533091 | None:intergenic | 25.0% |
!! | TTTTATATGAAGGTCAAGTA+CGG | + | chr1_1:31533072-31533091 | Msa0018650:CDS | 25.0% |
!! | AACCATATTAGGCAAATTTT+AGG | - | chr1_1:31533219-31533238 | None:intergenic | 25.0% |
!!! | ATTGACTTTGAAACCATATT+AGG | - | chr1_1:31533230-31533249 | None:intergenic | 25.0% |
!!! | ATCTTCTCTGTCTTTTTTTA+AGG | + | chr1_1:31533570-31533589 | Msa0018650:intron | 25.0% |
!! | AAATATATGTCATTCTAGGA+AGG | + | chr1_1:31533645-31533664 | Msa0018650:intron | 25.0% |
! | CCTAAAATAACATTTAGATG+GGG | + | chr1_1:31533876-31533895 | Msa0018650:intron | 25.0% |
! | AGGTTATCTAACTATAAACA+AGG | + | chr1_1:31533933-31533952 | Msa0018650:intron | 25.0% |
!! | GAAAAGTGCAAATATAATTG+TGG | + | chr1_1:31534112-31534131 | Msa0018650:intron | 25.0% |
! | ATTGTGTTATGTGTTATGTT+AGG | + | chr1_1:31534161-31534180 | Msa0018650:intron | 25.0% |
!! | ATATATGGTCACATTTCTTT+TGG | - | chr1_1:31534637-31534656 | None:intergenic | 25.0% |
! | AATATACGTCAACGTATATA+TGG | - | chr1_1:31534652-31534671 | None:intergenic | 25.0% |
!! | ACTTCATAGATTTTTCATGA+TGG | - | chr1_1:31534867-31534886 | None:intergenic | 25.0% |
!! | CAAGTTCTAATTCTTGTATT+GGG | - | chr1_1:31535057-31535076 | None:intergenic | 25.0% |
AATGAAAGAGTGATAGTTGT+TGG | + | chr1_1:31532066-31532085 | Msa0018650:CDS | 30.0% | |
GGATTATATAAGGAATGGAT+TGG | - | chr1_1:31532134-31532153 | None:intergenic | 30.0% | |
TTCGAGGATTATATAAGGAA+TGG | - | chr1_1:31532139-31532158 | None:intergenic | 30.0% | |
TCTCTTTCGAGGATTATATA+AGG | - | chr1_1:31532144-31532163 | None:intergenic | 30.0% | |
! | CAAAACAATTTTCTCTTTCG+AGG | - | chr1_1:31532155-31532174 | None:intergenic | 30.0% |
! | CTTCAATTTCAGGTACAAAA+GGG | - | chr1_1:31532485-31532504 | None:intergenic | 30.0% |
! | CTTTTGTACCTGAAATTGAA+GGG | + | chr1_1:31532484-31532503 | Msa0018650:CDS | 30.0% |
ATTCAACTGGGTTTAAGAAT+GGG | + | chr1_1:31532535-31532554 | Msa0018650:CDS | 30.0% | |
!! | ATGAACATGTTCTTGTTGTT+GGG | + | chr1_1:31532571-31532590 | Msa0018650:CDS | 30.0% |
! | TCTGATGAAGTATTTGTCAA+TGG | + | chr1_1:31532960-31532979 | Msa0018650:CDS | 30.0% |
TGCTTAGTAAAATGGTTTAC+GGG | + | chr1_1:31533007-31533026 | Msa0018650:CDS | 30.0% | |
GTACTTGACCTTCATATAAA+AGG | - | chr1_1:31533073-31533092 | None:intergenic | 30.0% | |
AAGTATCCTATTATTGACGT+TGG | + | chr1_1:31533096-31533115 | Msa0018650:CDS | 30.0% | |
! | TCGAGACTTAATTTTGTGAA+AGG | - | chr1_1:31533124-31533143 | None:intergenic | 30.0% |
AATTAAGTCTCGAGAGTTAA+AGG | + | chr1_1:31533131-31533150 | Msa0018650:CDS | 30.0% | |
ACGTTAGAGATAATTGACAT+TGG | + | chr1_1:31533155-31533174 | Msa0018650:intron | 30.0% | |
! | ATAATTGACATTGGTTGCTT+TGG | + | chr1_1:31533164-31533183 | Msa0018650:intron | 30.0% |
CACCTAAAATTTGCCTAATA+TGG | + | chr1_1:31533214-31533233 | Msa0018650:intron | 30.0% | |
TAATAGTTTAAGGACCAAAG+TGG | + | chr1_1:31533388-31533407 | Msa0018650:intron | 30.0% | |
!!! | CCCCATCTAAATGTTATTTT+AGG | - | chr1_1:31533879-31533898 | None:intergenic | 30.0% |
AAGAATGTCCTCTTCAAAAA+TGG | + | chr1_1:31534216-31534235 | Msa0018650:CDS | 30.0% | |
GAATAGATCAATATCAGCAA+CGG | + | chr1_1:31534414-31534433 | Msa0018650:intron | 30.0% | |
! | GATTACCTTTTGAATGATGA+TGG | + | chr1_1:31534716-31534735 | Msa0018650:CDS | 30.0% |
GAATACCATCATCATTCAAA+AGG | - | chr1_1:31534724-31534743 | None:intergenic | 30.0% | |
! | TTTTTCCCTTCCAATGAATA+GGG | - | chr1_1:31534760-31534779 | None:intergenic | 30.0% |
!!! | TTTTTTCCCTTCCAATGAAT+AGG | - | chr1_1:31534761-31534780 | None:intergenic | 30.0% |
ATTCATTGGAAGGGAAAAAA+TGG | + | chr1_1:31534761-31534780 | Msa0018650:CDS | 30.0% | |
TATATTGTGTTGGACTATCA+AGG | + | chr1_1:31534786-31534805 | Msa0018650:CDS | 30.0% | |
GAAAATAAAGATCAAAGGAG+AGG | + | chr1_1:31534991-31535010 | Msa0018650:three_prime_UTR | 30.0% | |
AAGTATAACCTCCAAACATA+TGG | + | chr1_1:31535029-31535048 | Msa0018650:three_prime_UTR | 30.0% | |
AGTATAACCTCCAAACATAT+GGG | + | chr1_1:31535030-31535049 | Msa0018650:three_prime_UTR | 30.0% | |
! | GCAAGTTCTAATTCTTGTAT+TGG | - | chr1_1:31535058-31535077 | None:intergenic | 30.0% |
!!! | GCTCGCAAAATTGTTTTTTG+AGG | - | chr1_1:31532221-31532240 | None:intergenic | 35.0% |
! | TGTATGATGGAAAAGAAGGT+GGG | - | chr1_1:31532260-31532279 | None:intergenic | 35.0% |
! | ATGTATGATGGAAAAGAAGG+TGG | - | chr1_1:31532261-31532280 | None:intergenic | 35.0% |
! | GGAATGTATGATGGAAAAGA+AGG | - | chr1_1:31532264-31532283 | None:intergenic | 35.0% |
GAGAATGCAAAGTATGATGA+AGG | + | chr1_1:31532360-31532379 | Msa0018650:CDS | 35.0% | |
!! | ATGATGAAGGTTCTGAGAAA+TGG | + | chr1_1:31532373-31532392 | Msa0018650:CDS | 35.0% |
AAGGCTAAGAATAAGGATTC+TGG | + | chr1_1:31532402-31532421 | Msa0018650:CDS | 35.0% | |
TAAGAATAAGGATTCTGGTG+AGG | + | chr1_1:31532407-31532426 | Msa0018650:CDS | 35.0% | |
! | GGAATATGAAGGAAGGTTTT+TGG | + | chr1_1:31532434-31532453 | Msa0018650:CDS | 35.0% |
! | CCTTCAATTTCAGGTACAAA+AGG | - | chr1_1:31532486-31532505 | None:intergenic | 35.0% |
! | CCTTTTGTACCTGAAATTGA+AGG | + | chr1_1:31532483-31532502 | Msa0018650:CDS | 35.0% |
! | AAGGGTTGAAGAGTTTTACT+GGG | + | chr1_1:31532502-31532521 | Msa0018650:CDS | 35.0% |
GGAAAGTGATTCATTCAACT+GGG | + | chr1_1:31532523-31532542 | Msa0018650:CDS | 35.0% | |
CATTCAACTGGGTTTAAGAA+TGG | + | chr1_1:31532534-31532553 | Msa0018650:CDS | 35.0% | |
! | GATGAACATGTTCTTGTTGT+TGG | + | chr1_1:31532570-31532589 | Msa0018650:CDS | 35.0% |
! | GTTAGCTGTTGATTATACGT+AGG | + | chr1_1:31532815-31532834 | Msa0018650:intron | 35.0% |
! | GAAGTATTTGTCAATGGAGA+TGG | + | chr1_1:31532966-31532985 | Msa0018650:CDS | 35.0% |
! | GATGGTGATGCTTAGTAAAA+TGG | + | chr1_1:31532999-31533018 | Msa0018650:CDS | 35.0% |
GCTTAGTAAAATGGTTTACG+GGG | + | chr1_1:31533008-31533027 | Msa0018650:CDS | 35.0% | |
AAGGTTCCAACGTCAATAAT+AGG | - | chr1_1:31533105-31533124 | None:intergenic | 35.0% | |
CTTAAGCATTCTATTTCAGC+TGG | - | chr1_1:31534192-31534211 | None:intergenic | 35.0% | |
GCTGAAATAGAATGCTTAAG+TGG | + | chr1_1:31534192-31534211 | Msa0018650:CDS | 35.0% | |
!! | GCAATTGACCATTTTTGAAG+AGG | - | chr1_1:31534227-31534246 | None:intergenic | 35.0% |
! | GACTCTATTATTTTCTGCAC+CGG | + | chr1_1:31534255-31534274 | Msa0018650:CDS | 35.0% |
TTCCAATGAATAGGGTAACT+TGG | - | chr1_1:31534752-31534771 | None:intergenic | 35.0% | |
AAGTTACCCTATTCATTGGA+AGG | + | chr1_1:31534751-31534770 | Msa0018650:CDS | 35.0% | |
AGTTACCCTATTCATTGGAA+GGG | + | chr1_1:31534752-31534771 | Msa0018650:CDS | 35.0% | |
! | CGTTGATTAGATTTCAGTTG+AGG | + | chr1_1:31534940-31534959 | Msa0018650:three_prime_UTR | 35.0% |
GTATAACCTCCAAACATATG+GGG | + | chr1_1:31535031-31535050 | Msa0018650:three_prime_UTR | 35.0% | |
TCAACTGTTCTGTGATACAG+AGG | - | chr1_1:31532342-31532361 | None:intergenic | 40.0% | |
!! | TGAAGGTTCTGAGAAATGGA+AGG | + | chr1_1:31532377-31532396 | Msa0018650:CDS | 40.0% |
! | TTCTGAGAAATGGAAGGTGA+AGG | + | chr1_1:31532383-31532402 | Msa0018650:CDS | 40.0% |
GAAGGTGAAGGCTAAGAATA+AGG | + | chr1_1:31532395-31532414 | Msa0018650:CDS | 40.0% | |
AGGTTGAGGAATATGAAGGA+AGG | + | chr1_1:31532427-31532446 | Msa0018650:CDS | 40.0% | |
!!! | TGAAGGAAGGTTTTTGGTTG+TGG | + | chr1_1:31532440-31532459 | Msa0018650:CDS | 40.0% |
CTCTTCAACCCTTCAATTTC+AGG | - | chr1_1:31532495-31532514 | None:intergenic | 40.0% | |
! | GAAGGGTTGAAGAGTTTTAC+TGG | + | chr1_1:31532501-31532520 | Msa0018650:CDS | 40.0% |
GGGAAAGTGATTCATTCAAC+TGG | + | chr1_1:31532522-31532541 | Msa0018650:CDS | 40.0% | |
!! | ATGTTCTTGTTGTTGGGTCT+GGG | + | chr1_1:31532577-31532596 | Msa0018650:CDS | 40.0% |
TTCTGGCATGGAAATTGCAT+TGG | + | chr1_1:31532602-31532621 | Msa0018650:CDS | 40.0% | |
GCATTGGATCTTATCAACCA+TGG | + | chr1_1:31532618-31532637 | Msa0018650:CDS | 40.0% | |
TAATTGACGGGATGAATGAG+TGG | + | chr1_1:31532753-31532772 | Msa0018650:intron | 40.0% | |
! | TGCAGGTTCACATTTTGTCA+AGG | + | chr1_1:31532914-31532933 | Msa0018650:intron | 40.0% |
! | GCAGGTTCACATTTTGTCAA+GGG | + | chr1_1:31532915-31532934 | Msa0018650:intron | 40.0% |
! | CAGGTTCACATTTTGTCAAG+GGG | + | chr1_1:31532916-31532935 | Msa0018650:intron | 40.0% |
! | TCAAGGGGTATGCTGAATTT+GGG | + | chr1_1:31532931-31532950 | Msa0018650:CDS | 40.0% |
GTATTTGTCAATGGAGATGG+TGG | + | chr1_1:31532969-31532988 | Msa0018650:CDS | 40.0% | |
ATATAAAAGGGACCCTCACT+AGG | - | chr1_1:31533060-31533079 | None:intergenic | 40.0% | |
! | TGAGGGTCCCTTTTATATGA+AGG | + | chr1_1:31533062-31533081 | Msa0018650:CDS | 40.0% |
! | TCAAGCGAGTTACTTTGCTT+GGG | - | chr1_1:31534010-31534029 | None:intergenic | 40.0% |
! | TTCAAGCGAGTTACTTTGCT+TGG | - | chr1_1:31534011-31534030 | None:intergenic | 40.0% |
TGTTGTTGTGACATGACGAA+TGG | + | chr1_1:31534136-31534155 | Msa0018650:intron | 40.0% | |
GTTGTTGTGACATGACGAAT+GGG | + | chr1_1:31534137-31534156 | Msa0018650:intron | 40.0% | |
TGAATAGGGTAACTTGGCTT+GGG | - | chr1_1:31534746-31534765 | None:intergenic | 40.0% | |
ATGAATAGGGTAACTTGGCT+TGG | - | chr1_1:31534747-31534766 | None:intergenic | 40.0% | |
AGCCAAGTTACCCTATTCAT+TGG | + | chr1_1:31534747-31534766 | Msa0018650:CDS | 40.0% | |
CTATCAAGGAGAGGTTTCTA+TGG | + | chr1_1:31534800-31534819 | Msa0018650:CDS | 40.0% | |
AGAGTGATAGTTGTTGGAGC+AGG | + | chr1_1:31532072-31532091 | Msa0018650:CDS | 45.0% | |
GATGGAAAAGAAGGTGGGAA+TGG | - | chr1_1:31532255-31532274 | None:intergenic | 45.0% | |
TAAGGATTCTGGTGAGGTTG+AGG | + | chr1_1:31532413-31532432 | Msa0018650:CDS | 45.0% | |
GGTGAGGTTGAGGAATATGA+AGG | + | chr1_1:31532423-31532442 | Msa0018650:CDS | 45.0% | |
!!! | AGGTTTTTGGTTGTGGCTAG+TGG | + | chr1_1:31532447-31532466 | Msa0018650:CDS | 45.0% |
!! | CATGTTCTTGTTGTTGGGTC+TGG | + | chr1_1:31532576-31532595 | Msa0018650:CDS | 45.0% |
!! | CGATTGAGGTTTTAGCACCA+TGG | - | chr1_1:31532638-31532657 | None:intergenic | 45.0% |
CTTGCTTCGAACAACGATTG+AGG | - | chr1_1:31532652-31532671 | None:intergenic | 45.0% | |
CTCAATCGTTGTTCGAAGCA+AGG | + | chr1_1:31532650-31532669 | Msa0018650:CDS | 45.0% | |
! | GTCAAGGGGTATGCTGAATT+TGG | + | chr1_1:31532930-31532949 | Msa0018650:CDS | 45.0% |
! | CAAGGGGTATGCTGAATTTG+GGG | + | chr1_1:31532932-31532951 | Msa0018650:CDS | 45.0% |
!! | GGAGATGGTGGATTTAGTGA+TGG | + | chr1_1:31532981-31533000 | Msa0018650:CDS | 45.0% |
TACGGGGATGTCACGAATTA+TGG | + | chr1_1:31533024-31533043 | Msa0018650:CDS | 45.0% | |
ACGGGGATGTCACGAATTAT+GGG | + | chr1_1:31533025-31533044 | Msa0018650:CDS | 45.0% | |
GATGTCACGAATTATGGGGT+TGG | + | chr1_1:31533030-31533049 | Msa0018650:CDS | 45.0% | |
! | TCACGAATTATGGGGTTGGT+AGG | + | chr1_1:31533034-31533053 | Msa0018650:CDS | 45.0% |
! | CAAGCGAGTTACTTTGCTTG+GGG | - | chr1_1:31534009-31534028 | None:intergenic | 45.0% |
TCAAGAGATCAACCCACAAG+TGG | + | chr1_1:31534280-31534299 | Msa0018650:CDS | 45.0% | |
ATCAACCCACAAGTGGCTTA+AGG | + | chr1_1:31534287-31534306 | Msa0018650:CDS | 45.0% | |
GCAAACCTTAAGCCACTTGT+GGG | - | chr1_1:31534295-31534314 | None:intergenic | 45.0% | |
TGCAAACCTTAAGCCACTTG+TGG | - | chr1_1:31534296-31534315 | None:intergenic | 45.0% | |
TGTGTTGGACTATCAAGGAG+AGG | + | chr1_1:31534791-31534810 | Msa0018650:CDS | 45.0% | |
TGTATTGGGCCCCATATGTT+TGG | - | chr1_1:31535043-31535062 | None:intergenic | 45.0% | |
CTGCTACTGAGAGACCAGAA+GGG | - | chr1_1:31532098-31532117 | None:intergenic | 50.0% | |
! | GAAGGTGGGAATGGTTTGTG+AGG | - | chr1_1:31532246-31532265 | None:intergenic | 50.0% |
GTTGTTGGGTCTGGGAATTC+TGG | + | chr1_1:31532585-31532604 | Msa0018650:CDS | 50.0% | |
CGGGGATGTCACGAATTATG+GGG | + | chr1_1:31533026-31533045 | Msa0018650:CDS | 50.0% | |
TTAAGGACCAAAGTGGCGAG+AGG | + | chr1_1:31533395-31533414 | Msa0018650:intron | 50.0% | |
TAAGGACCAAAGTGGCGAGA+GGG | + | chr1_1:31533396-31533415 | Msa0018650:intron | 50.0% | |
!! | GGCGAGAGGGTATTGGTTTA+AGG | + | chr1_1:31533409-31533428 | Msa0018650:intron | 50.0% |
!! | GTGGGTTGATCTCTTGAAGC+CGG | - | chr1_1:31534277-31534296 | None:intergenic | 50.0% |
ATTGGGCCCCATATGTTTGG+AGG | - | chr1_1:31535040-31535059 | None:intergenic | 50.0% | |
GCTGCTACTGAGAGACCAGA+AGG | - | chr1_1:31532099-31532118 | None:intergenic | 55.0% | |
TGGGTCTGGGAATTCTGGCA+TGG | + | chr1_1:31532590-31532609 | Msa0018650:CDS | 55.0% | |
CCAATACCCTCTCGCCACTT+TGG | - | chr1_1:31533405-31533424 | None:intergenic | 55.0% | |
! | CCAAAGTGGCGAGAGGGTAT+TGG | + | chr1_1:31533402-31533421 | Msa0018650:intron | 55.0% |
GTTGTTGGAGCAGGCCCTTC+TGG | + | chr1_1:31532081-31532100 | Msa0018650:CDS | 60.0% | |
!! | TGGGGTTGGTAGGCCTAGTG+AGG | + | chr1_1:31533044-31533063 | Msa0018650:CDS | 60.0% |
!! | GGGGTTGGTAGGCCTAGTGA+GGG | + | chr1_1:31533045-31533064 | Msa0018650:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 31531986 | 31535196 | 31531986 | ID=Msa0018650;Name=Msa0018650 |
chr1_1 | mRNA | 31531986 | 31535196 | 31531986 | ID=Msa0018650-mRNA-1;Parent=Msa0018650;Name=Msa0018650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=68|1|1|1|0.75|0.6|5|281|383 |
chr1_1 | exon | 31531986 | 31532671 | 31531986 | ID=Msa0018650-mRNA-1:exon:10370;Parent=Msa0018650-mRNA-1 |
chr1_1 | exon | 31532919 | 31533152 | 31532919 | ID=Msa0018650-mRNA-1:exon:10371;Parent=Msa0018650-mRNA-1 |
chr1_1 | exon | 31534183 | 31534308 | 31534183 | ID=Msa0018650-mRNA-1:exon:10372;Parent=Msa0018650-mRNA-1 |
chr1_1 | exon | 31534710 | 31535063 | 31534710 | ID=Msa0018650-mRNA-1:exon:10373;Parent=Msa0018650-mRNA-1 |
chr1_1 | exon | 31535096 | 31535196 | 31535096 | ID=Msa0018650-mRNA-1:exon:10374;Parent=Msa0018650-mRNA-1 |
chr1_1 | five_prime_UTR | 31531986 | 31532053 | 31531986 | ID=Msa0018650-mRNA-1:five_prime_utr;Parent=Msa0018650-mRNA-1 |
chr1_1 | CDS | 31532054 | 31532671 | 31532054 | ID=Msa0018650-mRNA-1:cds;Parent=Msa0018650-mRNA-1 |
chr1_1 | CDS | 31532919 | 31533152 | 31532919 | ID=Msa0018650-mRNA-1:cds;Parent=Msa0018650-mRNA-1 |
chr1_1 | CDS | 31534183 | 31534308 | 31534183 | ID=Msa0018650-mRNA-1:cds;Parent=Msa0018650-mRNA-1 |
chr1_1 | CDS | 31534710 | 31534883 | 31534710 | ID=Msa0018650-mRNA-1:cds;Parent=Msa0018650-mRNA-1 |
chr1_1 | three_prime_UTR | 31534884 | 31535063 | 31534884 | ID=Msa0018650-mRNA-1:three_prime_utr;Parent=Msa0018650-mRNA-1 |
chr1_1 | three_prime_UTR | 31535096 | 31535196 | 31535096 | ID=Msa0018650-mRNA-1:three_prime_utr;Parent=Msa0018650-mRNA-1 |
Gene Sequence |
Protein sequence |