AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171780 MtrunA17_Chr8g0387211 91.798 573 14 1 1 540 1 573 0.0 1074
Msa1171780 MtrunA17_Chr4g0048391 78.475 590 73 4 1 540 3 588 0.0 933
Msa1171780 MtrunA17_Chr7g0251831 51.309 573 231 6 9 540 6 571 0.0 575
Msa1171780 MtrunA17_Chr1g0196061 49.123 570 248 3 9 540 16 581 0.0 574
Msa1171780 MtrunA17_Chr5g0427061 46.678 572 257 7 9 540 53 616 7.69e-171 497
Msa1171780 MtrunA17_Chr3g0133241 45.993 574 261 7 11 540 25 593 3.89e-170 494
Msa1171780 MtrunA17_Chr5g0436511 30.288 591 338 15 6 540 10 582 2.75e-79 259
Msa1171780 MtrunA17_Chr3g0113151 28.067 595 353 11 6 540 14 593 1.98e-66 226
Msa1171780 MtrunA17_Chr8g0364131 26.930 557 301 16 31 540 9 506 1.19e-47 173
Msa1171780 MtrunA17_Chr5g0439771 50.526 95 42 1 35 124 17 111 8.59e-25 99.8
Msa1171780 MtrunA17_Chr2g0286991 25.692 506 325 17 9 503 13 478 2.35e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171780 AT3G62980.1 51.754 570 233 3 9 540 11 576 0.0 570
Msa1171780 AT1G12820.1 48.797 582 238 6 9 540 6 577 0.0 558
Msa1171780 AT3G26810.1 50.261 575 238 6 9 540 6 575 0.0 557
Msa1171780 AT4G03190.1 49.650 572 247 4 6 540 4 571 0.0 555
Msa1171780 AT4G24390.2 46.957 575 255 7 9 540 56 623 9.50e-178 515
Msa1171780 AT4G24390.1 46.957 575 255 7 9 540 56 623 9.50e-178 515
Msa1171780 AT5G49980.1 46.397 569 263 6 9 540 56 619 4.55e-172 500
Msa1171780 AT2G39940.1 29.442 591 348 12 4 540 13 588 3.27e-84 273
Msa1171780 AT4G15475.1 23.790 496 321 19 9 490 13 465 8.60e-17 84.0
Msa1171780 AT4G15475.1 23.577 246 155 9 222 457 364 586 1.19e-11 67.8
Msa1171780 AT5G25350.1 27.542 236 127 10 282 486 166 388 7.25e-12 68.6

Find 134 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACACCCTTTCTGGTTTA+TGG 0.078775 8_1:+1701856 Msa1171780:CDS
TCCAATGATGTAAAGCTTTC+TGG 0.097724 8_1:-1701594 None:intergenic
TCAACTTGGTTCCTGAAAAT+TGG 0.125267 8_1:+1700441 Msa1171780:CDS
AAGAGTCTTCACACCCTTTC+TGG 0.147620 8_1:+1701849 Msa1171780:CDS
CTCCAAAGGCTTTCTGTATC+AGG 0.215148 8_1:+1702475 Msa1171780:CDS
TCACACCCTTTCTGGTTTAT+GGG 0.221558 8_1:+1701857 Msa1171780:CDS
CAACTTGGTTCCTGAAAATT+GGG 0.247042 8_1:+1700442 Msa1171780:CDS
GTTGAATGTTGAAGTAATTA+AGG 0.252910 8_1:+1702771 Msa1171780:CDS
CCTTGGAATGTGACCGTATA+TGG 0.262480 8_1:+1703313 Msa1171780:three_prime_UTR
GTCCTGACTTCACTCATTTC+CGG 0.265535 8_1:+1702362 Msa1171780:CDS
GTCCTAATCTTCGGCGCCTT+TGG 0.274559 8_1:+1702006 Msa1171780:CDS
TCCTAATCTTCGGCGCCTTT+GGG 0.278407 8_1:+1702007 Msa1171780:CDS
CGATATTTACATCATTGTTT+AGG 0.287424 8_1:-1701635 None:intergenic
GTCAGGTAATCTGGCTGATT+AGG 0.288888 8_1:-1702400 None:intergenic
GACCTCGCATTTGAGTATTT+AGG 0.296175 8_1:+1702508 Msa1171780:CDS
TCAGGTAATCTGGCTGATTA+GGG 0.296950 8_1:-1702399 None:intergenic
ACCTCGCATTTGAGTATTTA+GGG 0.305990 8_1:+1702509 Msa1171780:CDS
TATGTTTATCGTTCTGTTGC+CGG 0.306416 8_1:+1702829 Msa1171780:CDS
GGTTCATTTGTCAGGTAATC+TGG 0.309160 8_1:-1702409 None:intergenic
ACAATGAAGCCTCAGTAATA+TGG 0.313485 8_1:+1703352 Msa1171780:three_prime_UTR
AGTGTAACACTTCTTATGTT+TGG 0.320668 8_1:-1700392 None:intergenic
GAAATATGTTTGTCTCTTCC+AGG 0.328855 8_1:-1703678 None:intergenic
AATGGAGGGGCATCCCTTCT+TGG 0.338658 8_1:-1702853 None:intergenic
TTGACGAGGGTGTTGTGCAC+GGG 0.346978 8_1:+1702227 Msa1171780:CDS
TCCAGAAAGCTTTACATCAT+TGG 0.349988 8_1:+1701593 Msa1171780:CDS
CTTGCCTTCTTTCAACTAGT+TGG 0.351212 8_1:+1703500 Msa1171780:three_prime_UTR
GAAGTGTTGAAACAAGTTCT+TGG 0.355603 8_1:+1700230 Msa1171780:CDS
ATGCATGTGTCCATTGTAAA+TGG 0.361607 8_1:+1703540 Msa1171780:three_prime_UTR
GGGATGCAGTCTGTACTTGC+TGG 0.363431 8_1:+1702589 Msa1171780:CDS
TTGCCGGAAGCAGTGACTTT+GGG 0.371104 8_1:+1702569 Msa1171780:CDS
TTGCCTTCTTTCAACTAGTT+GGG 0.371284 8_1:+1703501 Msa1171780:three_prime_UTR
ATTACTGAGGCTTCATTGTC+AGG 0.371423 8_1:-1703348 None:intergenic
TTGTTCATTGTCCTAATCTT+CGG 0.380170 8_1:+1701997 Msa1171780:CDS
GTGCACGGGGTTACTGAATC+AGG 0.384151 8_1:+1702241 Msa1171780:CDS
CATCCATAGGTTCATTTGTC+AGG 0.387955 8_1:-1702417 None:intergenic
CATCCCAAAGTCACTGCTTC+CGG 0.404250 8_1:-1702572 None:intergenic
GCTGAGAAAACTTGAGATAA+GGG 0.404897 8_1:+1702621 Msa1171780:CDS
GAACCTATGGATGAGGCCTT+TGG 0.408205 8_1:+1702427 Msa1171780:CDS
GCCCCTCAGTTATGTGAGCT+TGG 0.420842 8_1:+1701756 Msa1171780:CDS
GACACATGCATTATTTCTCT+TGG 0.421024 8_1:-1703528 None:intergenic
AGAAGGAAGCGATGATAGTC+AGG 0.422000 8_1:+1702795 Msa1171780:CDS
ATGGAGGGGCATCCCTTCTT+GGG 0.423321 8_1:-1702852 None:intergenic
AGCCTCAACTCCTCAAGAAA+AGG 0.428352 8_1:-1700509 None:intergenic
TTGAATTGAAATATTTATCC+TGG 0.432612 8_1:+1703660 Msa1171780:three_prime_UTR
CCTGCAGATCCCTTTGACGA+GGG 0.434417 8_1:+1702214 Msa1171780:CDS
TTTCAGAGAGTGAGAACAAA+TGG 0.440221 8_1:-1702871 None:intergenic
ACCCAAAGGCGCCGAAGATT+AGG 0.441045 8_1:-1702008 None:intergenic
TTTGCCGGAAGCAGTGACTT+TGG 0.444477 8_1:+1702568 Msa1171780:CDS
GCCATTGATTGTTGTTGTGT+TGG 0.448430 8_1:+1703430 Msa1171780:three_prime_UTR
CAAATCATTGAAGACTTTGA+AGG 0.450196 8_1:+1701686 Msa1171780:CDS
CCCTCGTCAAAGGGATCTGC+AGG 0.450415 8_1:-1702214 None:intergenic
GATGCCAACTTTGCCATATA+CGG 0.454128 8_1:-1703326 None:intergenic
GGGGTGCTGATATTCATTCA+TGG 0.461105 8_1:+1700462 Msa1171780:CDS
TTTGACGAGGGTGTTGTGCA+CGG 0.461850 8_1:+1702226 Msa1171780:CDS
AACCTGATACAGAAAGCCTT+TGG 0.463742 8_1:-1702477 None:intergenic
AGCTGAGAAAACTTGAGATA+AGG 0.465986 8_1:+1702620 Msa1171780:CDS
ACATGCATTATTTCTCTTGG+TGG 0.470351 8_1:-1703525 None:intergenic
TACATCCATTCATTGTTACT+TGG 0.471398 8_1:-1702723 None:intergenic
AATCTACTTGTCAAGATCTC+AGG 0.472486 8_1:-1700368 None:intergenic
TGCTGATATTCATTCATGGT+TGG 0.476550 8_1:+1700466 Msa1171780:CDS
AGGGGCATCCCTTCTTGGGC+CGG 0.481810 8_1:-1702848 None:intergenic
GACTGCCAAGTAACAATGAA+TGG 0.488206 8_1:+1702718 Msa1171780:CDS
ACCAACACAACAACAATCAA+TGG 0.488230 8_1:-1703431 None:intergenic
AAGCCTTTGGAGTTTAGTGC+AGG 0.488319 8_1:-1702464 None:intergenic
CCATATACGGTCACATTCCA+AGG 0.490187 8_1:-1703313 None:intergenic
AGAGGACGTAGTGAAGCTTC+CGG 0.490890 8_1:-1702288 None:intergenic
GGAGTTGAGGCTCAAGAGAA+TGG 0.491782 8_1:+1700520 Msa1171780:CDS
GTTGAAGTAATTAAGGAAGA+AGG 0.492228 8_1:+1702778 Msa1171780:CDS
CAGTTATGTGAGCTTGGCAG+TGG 0.493794 8_1:+1701762 Msa1171780:CDS
ATAAGAAGTGTTACACTCAA+AGG 0.496754 8_1:+1700398 Msa1171780:CDS
CACCCTTTCTGGTTTATGGG+TGG 0.500938 8_1:+1701860 Msa1171780:CDS
GTGCACAACACCCTCGTCAA+AGG 0.501470 8_1:-1702224 None:intergenic
TGCACAACACCCTCGTCAAA+GGG 0.502790 8_1:-1702223 None:intergenic
GAGATAAGGGACTGTCCATT+CGG 0.505837 8_1:+1702634 Msa1171780:CDS
GATGCGCTTGAGAAACTTGT+CGG 0.507130 8_1:+1701657 Msa1171780:CDS
TAAGAAGTGTTACACTCAAA+GGG 0.508033 8_1:+1700399 Msa1171780:CDS
TCGATGACAAAAGCGGTGAT+TGG 0.508436 8_1:+1701559 Msa1171780:CDS
CAGAGTATAGAACTTGAAGT+TGG 0.510227 8_1:-1701905 None:intergenic
AGCCGGAAATGAGTGAAGTC+AGG 0.516302 8_1:-1702364 None:intergenic
TTACCTGACAAATGAACCTA+TGG 0.517098 8_1:+1702414 Msa1171780:CDS
AACAATCAATGGCTACATGA+TGG 0.520965 8_1:-1703420 None:intergenic
GTTCTGTTGCCGGCCCAAGA+AGG 0.525623 8_1:+1702839 Msa1171780:CDS
ATTCTCTTGTATGTCAAGCT+CGG 0.532804 8_1:-1701532 None:intergenic
TTCTGTTGCCGGCCCAAGAA+GGG 0.535830 8_1:+1702840 Msa1171780:CDS
GTGACCGTATATGGCAAAGT+TGG 0.535910 8_1:+1703322 Msa1171780:three_prime_UTR
GCTCCAAAGGCCTCATCCAT+AGG 0.536354 8_1:-1702430 None:intergenic
GCCTCAACTCCTCAAGAAAA+GGG 0.537412 8_1:-1700508 None:intergenic
TTGCTGTCTCTGAAGGATGC+CGG 0.538728 8_1:+1702269 Msa1171780:CDS
AGCCACCCATAAACCAGAAA+GGG 0.542673 8_1:-1701862 None:intergenic
TAGGGGTCATGATGCAGAGC+CGG 0.545042 8_1:-1702381 None:intergenic
GGTCTTAACAACTGCTCCAA+AGG 0.546055 8_1:-1702443 None:intergenic
ATCATATTGTCCATTGCTTG+AGG 0.546358 8_1:+1702177 Msa1171780:CDS
CAGCATCATTTGTCATCTGA+TGG 0.546732 8_1:-1702318 None:intergenic
TCCTGCAGATCCCTTTGACG+AGG 0.555334 8_1:+1702213 Msa1171780:CDS
CACAGTTGAAGACAAGGGAC+TGG 0.558137 8_1:+1702144 Msa1171780:CDS
CCTACACTTTGAAGCTCAAG+AGG 0.559487 8_1:+1702907 Msa1171780:three_prime_UTR
GACAAGGGACTGGAAGCTGT+TGG 0.564143 8_1:+1702154 Msa1171780:CDS
ACGTTTCTCTGACTTCAACT+TGG 0.564927 8_1:+1700427 Msa1171780:CDS
CCTCTTGAGCTTCAAAGTGT+AGG 0.568176 8_1:-1702907 None:intergenic
AAACTTGGAAACGCTTTCAG+TGG 0.570395 8_1:+1702543 Msa1171780:CDS
GGACCCAACTAGTTGAAAGA+AGG 0.570671 8_1:-1703504 None:intergenic
ATGAGTCAATGAGATCACTT+TGG 0.571140 8_1:+1702689 Msa1171780:CDS
TGACGAGGGTGTTGTGCACG+GGG 0.571274 8_1:+1702228 Msa1171780:CDS
AATGAGATCACTTTGGATGT+CGG 0.575734 8_1:+1702696 Msa1171780:CDS
AAGCCACCCATAAACCAGAA+AGG 0.576681 8_1:-1701863 None:intergenic
TTCCACCTTCCATATTACTG+AGG 0.577064 8_1:-1703361 None:intergenic
GACAAATGAACCTATGGATG+AGG 0.578886 8_1:+1702420 Msa1171780:CDS
ATTACTTCAACATTCAACCT+CGG 0.585805 8_1:-1702766 None:intergenic
ACACGTAGCTCCTCAAGCAA+TGG 0.587975 8_1:-1702187 None:intergenic
TCATCTGATGGCAAAAGTAG+AGG 0.589318 8_1:-1702306 None:intergenic
TTTCTTTAGTTTGCAAACAG+TGG 0.597043 8_1:+1700285 Msa1171780:CDS
AAAAGTGCTGCATCGCCGAA+TGG 0.606996 8_1:-1702649 None:intergenic
CAGAGAGTGAGAACAAATGG+AGG 0.612840 8_1:-1702868 None:intergenic
AGCCTCAGTAATATGGAAGG+TGG 0.616841 8_1:+1703359 Msa1171780:three_prime_UTR
TGCCAAGCTCACATAACTGA+GGG 0.617421 8_1:-1701758 None:intergenic
CGCTTGAGAAACTTGTCGGT+AGG 0.619571 8_1:+1701661 Msa1171780:CDS
AACTTGGTTCCTGAAAATTG+GGG 0.622806 8_1:+1700443 Msa1171780:CDS
AGAGAGTGAGAACAAATGGA+GGG 0.623048 8_1:-1702867 None:intergenic
TCCCTAAATACTCAAATGCG+AGG 0.626376 8_1:-1702510 None:intergenic
TGAAGCCTCAGTAATATGGA+AGG 0.626705 8_1:+1703356 Msa1171780:three_prime_UTR
TCAGTAATATGGAAGGTGGA+AGG 0.628553 8_1:+1703363 Msa1171780:three_prime_UTR
TGTTAGCAAAAGAAAAGCCG+AGG 0.639572 8_1:+1702749 Msa1171780:CDS
CAGGTAATCTGGCTGATTAG+GGG 0.642566 8_1:-1702398 None:intergenic
TGTAGACACAGTTGAAGACA+AGG 0.644710 8_1:+1702138 Msa1171780:CDS
AGACCTGCACTAAACTCCAA+AGG 0.647440 8_1:+1702461 Msa1171780:CDS
AATGACATCGATGACAAAAG+CGG 0.649581 8_1:+1701552 Msa1171780:CDS
CTGCCAAGCTCACATAACTG+AGG 0.656866 8_1:-1701759 None:intergenic
GCTCACATAACTGAGGGGCA+AGG 0.682791 8_1:-1701752 None:intergenic
ACAACGCTGAAAGATTGTCA+AGG 0.689288 8_1:+1700309 Msa1171780:CDS
GAGAGTGAGAACAAATGGAG+GGG 0.695193 8_1:-1702866 None:intergenic
ACGCTGAAAGATTGTCAAGG+AGG 0.697851 8_1:+1700312 Msa1171780:CDS
GCCAAGCTCACATAACTGAG+GGG 0.733620 8_1:-1701757 None:intergenic
GTAGACACAGTTGAAGACAA+GGG 0.743765 8_1:+1702139 Msa1171780:CDS
AAGTTGAAGTCAGAGAAACG+TGG 0.761191 8_1:-1700425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAATGTGATTTAAT+AGG + chr8_1:1701251-1701270 Msa1171780:intron 10.0%
!! AATTAAAATGTGATTTAATA+GGG + chr8_1:1701252-1701271 Msa1171780:intron 10.0%
!!! ACAAAAAGTTTTTTAATTTT+AGG + chr8_1:1703593-1703612 Msa1171780:three_prime_UTR 10.0%
!!! CAAAAAGTTTTTTAATTTTA+GGG + chr8_1:1703594-1703613 Msa1171780:three_prime_UTR 10.0%
!!! AAAAAGTTTTTTAATTTTAG+GGG + chr8_1:1703595-1703614 Msa1171780:three_prime_UTR 10.0%
!! CAATAAATACTGATATATTT+AGG - chr8_1:1700784-1700803 None:intergenic 15.0%
!! TAAATCAATCTATGAATTAA+TGG - chr8_1:1700971-1700990 None:intergenic 15.0%
!!! AATTCATAGATTGATTTATT+AGG + chr8_1:1700973-1700992 Msa1171780:intron 15.0%
!!! ATTTTAATTATGTAACAATG+AGG - chr8_1:1701241-1701260 None:intergenic 15.0%
!!! ATGTAAATATTTTATGCCAA+CGG - chr8_1:1701047-1701066 None:intergenic 20.0%
!!! CTTTTTAAGATTCTTAAGTA+AGG + chr8_1:1701105-1701124 Msa1171780:intron 20.0%
!! TTTGAAAATTTGGTATTACT+TGG + chr8_1:1701462-1701481 Msa1171780:intron 20.0%
!!! AAAGAATGATGAAAATGTTT+TGG + chr8_1:1702095-1702114 Msa1171780:intron 20.0%
!! ACTTCTTAGTCTAATTAATT+GGG - chr8_1:1703027-1703046 None:intergenic 20.0%
!! GTTGATTGGTAAAAAAATAA+TGG + chr8_1:1703089-1703108 Msa1171780:intron 20.0%
!! AAAGTAAAGTGACAAATAAT+TGG - chr8_1:1703231-1703250 None:intergenic 20.0%
!! TTGAATTGAAATATTTATCC+TGG + chr8_1:1703660-1703679 Msa1171780:three_prime_UTR 20.0%
! TAAATCTTACTTGCAATTAG+TGG - chr8_1:1700653-1700672 None:intergenic 25.0%
!!! TTGCATTGTTTTTCATTTAC+TGG + chr8_1:1700918-1700937 Msa1171780:intron 25.0%
! ATTAGGATTCACTAAAATAC+AGG + chr8_1:1700990-1701009 Msa1171780:intron 25.0%
!!! GTTTAATTTTGATATACCGT+TGG + chr8_1:1701028-1701047 Msa1171780:intron 25.0%
!!! GTTTTTTGCACATATTCAAT+TGG - chr8_1:1701086-1701105 None:intergenic 25.0%
! TATCAATCAATTATAATCGC+CGG - chr8_1:1701149-1701168 None:intergenic 25.0%
! TGAATCCATATAAATACTTG+TGG + chr8_1:1701204-1701223 Msa1171780:intron 25.0%
! AAGTTCCACAAGTATTTATA+TGG - chr8_1:1701212-1701231 None:intergenic 25.0%
! ATCATATATGCAGTACTTAA+AGG - chr8_1:1701309-1701328 None:intergenic 25.0%
! ACTGCATATATGATTATCTT+TGG + chr8_1:1701315-1701334 Msa1171780:intron 25.0%
! TATCGAGTGATTTGAAAATT+TGG + chr8_1:1701452-1701471 Msa1171780:intron 25.0%
! AATTTGGTATTACTTGGATT+TGG + chr8_1:1701468-1701487 Msa1171780:intron 25.0%
! ATCATCTTCTGAATATTACA+TGG + chr8_1:1701495-1701514 Msa1171780:intron 25.0%
! CGATATTTACATCATTGTTT+AGG - chr8_1:1701638-1701657 None:intergenic 25.0%
! ATAAAGAAAATCATACCCAA+AGG - chr8_1:1702025-1702044 None:intergenic 25.0%
! GTTGAATGTTGAAGTAATTA+AGG + chr8_1:1702771-1702790 Msa1171780:CDS 25.0%
!! AGTCTAATTAATTGGGTTTT+GGG - chr8_1:1703020-1703039 None:intergenic 25.0%
!! TAGTCTAATTAATTGGGTTT+TGG - chr8_1:1703021-1703040 None:intergenic 25.0%
! CACTTCTTAGTCTAATTAAT+TGG - chr8_1:1703028-1703047 None:intergenic 25.0%
! TATTATATGATTCTGCTCTT+TGG + chr8_1:1703056-1703075 Msa1171780:intron 25.0%
! TTGGAAAACAAATTGTTGAT+TGG + chr8_1:1703075-1703094 Msa1171780:intron 25.0%
!!! ATTTTTCATGCCATTTACAA+TGG - chr8_1:1703553-1703572 None:intergenic 25.0%
!! TTTCTTTAGTTTGCAAACAG+TGG + chr8_1:1700285-1700304 Msa1171780:CDS 30.0%
AGTGTAACACTTCTTATGTT+TGG - chr8_1:1700395-1700414 None:intergenic 30.0%
!! ATAAGAAGTGTTACACTCAA+AGG + chr8_1:1700398-1700417 Msa1171780:CDS 30.0%
!! TAAGAAGTGTTACACTCAAA+GGG + chr8_1:1700399-1700418 Msa1171780:CDS 30.0%
!! TGATGAGAGTTTAGAGTTTT+TGG + chr8_1:1700550-1700569 Msa1171780:intron 30.0%
AGTTGTGTGTGAATTTCAAT+TGG - chr8_1:1700723-1700742 None:intergenic 30.0%
AATGAAAAACAATGCAAACC+AGG - chr8_1:1700915-1700934 None:intergenic 30.0%
! GACAAGCATTTTTAATGATC+CGG + chr8_1:1701127-1701146 Msa1171780:intron 30.0%
CAAATCATTGAAGACTTTGA+AGG + chr8_1:1701686-1701705 Msa1171780:CDS 30.0%
TTGTTCATTGTCCTAATCTT+CGG + chr8_1:1701997-1702016 Msa1171780:CDS 30.0%
TTGGAACATCTACATTATAC+AGG + chr8_1:1702114-1702133 Msa1171780:intron 30.0%
TACATCCATTCATTGTTACT+TGG - chr8_1:1702726-1702745 None:intergenic 30.0%
ATTACTTCAACATTCAACCT+CGG - chr8_1:1702769-1702788 None:intergenic 30.0%
GTTGAAGTAATTAAGGAAGA+AGG + chr8_1:1702778-1702797 Msa1171780:CDS 30.0%
TGGTAAAAAAATAATGGCCT+TGG + chr8_1:1703095-1703114 Msa1171780:intron 30.0%
! AGTGGAAACATCACTATTTT+TGG + chr8_1:1703130-1703149 Msa1171780:intron 30.0%
!! GTGGAAACATCACTATTTTT+GGG + chr8_1:1703131-1703150 Msa1171780:intron 30.0%
!!! GCATCATCAACTTTTTCAAA+TGG + chr8_1:1703175-1703194 Msa1171780:intron 30.0%
!! TAATTTTAGGGGATCATGTT+AGG + chr8_1:1703606-1703625 Msa1171780:three_prime_UTR 30.0%
!! GAAGTGTTGAAACAAGTTCT+TGG + chr8_1:1700230-1700249 Msa1171780:CDS 35.0%
! TCAAGGAGGAATGTTTTCAT+AGG + chr8_1:1700326-1700345 Msa1171780:CDS 35.0%
AATCTACTTGTCAAGATCTC+AGG - chr8_1:1700371-1700390 None:intergenic 35.0%
TCAACTTGGTTCCTGAAAAT+TGG + chr8_1:1700441-1700460 Msa1171780:CDS 35.0%
CAACTTGGTTCCTGAAAATT+GGG + chr8_1:1700442-1700461 Msa1171780:CDS 35.0%
AACTTGGTTCCTGAAAATTG+GGG + chr8_1:1700443-1700462 Msa1171780:CDS 35.0%
TGCTGATATTCATTCATGGT+TGG + chr8_1:1700466-1700485 Msa1171780:CDS 35.0%
!!! TGAAAAGTACCCTTTTCTTG+AGG + chr8_1:1700499-1700518 Msa1171780:CDS 35.0%
TAGGACAAGGATTCTCTAAT+TGG - chr8_1:1700852-1700871 None:intergenic 35.0%
!! GCTAAGATTTGTTGTCTGTA+TGG + chr8_1:1700886-1700905 Msa1171780:intron 35.0%
TCTGAATATTACATGGATGC+AGG + chr8_1:1701502-1701521 Msa1171780:intron 35.0%
ATTCTCTTGTATGTCAAGCT+CGG - chr8_1:1701535-1701554 None:intergenic 35.0%
AATGACATCGATGACAAAAG+CGG + chr8_1:1701552-1701571 Msa1171780:CDS 35.0%
TCCAGAAAGCTTTACATCAT+TGG + chr8_1:1701593-1701612 Msa1171780:CDS 35.0%
TCCAATGATGTAAAGCTTTC+TGG - chr8_1:1701597-1701616 None:intergenic 35.0%
CAGAGTATAGAACTTGAAGT+TGG - chr8_1:1701908-1701927 None:intergenic 35.0%
ATCATATTGTCCATTGCTTG+AGG + chr8_1:1702177-1702196 Msa1171780:CDS 35.0%
TTACCTGACAAATGAACCTA+TGG + chr8_1:1702414-1702433 Msa1171780:CDS 35.0%
ACCTCGCATTTGAGTATTTA+GGG + chr8_1:1702509-1702528 Msa1171780:CDS 35.0%
!!! TGAAAGCGTTTCCAAGTTTT+TGG - chr8_1:1702542-1702561 None:intergenic 35.0%
! ATCTCAAGTTTTCTCAGCTT+CGG - chr8_1:1702619-1702638 None:intergenic 35.0%
AGCTGAGAAAACTTGAGATA+AGG + chr8_1:1702620-1702639 Msa1171780:CDS 35.0%
GCTGAGAAAACTTGAGATAA+GGG + chr8_1:1702621-1702640 Msa1171780:CDS 35.0%
ATGAGTCAATGAGATCACTT+TGG + chr8_1:1702689-1702708 Msa1171780:CDS 35.0%
AATGAGATCACTTTGGATGT+CGG + chr8_1:1702696-1702715 Msa1171780:CDS 35.0%
TATGTTTATCGTTCTGTTGC+CGG + chr8_1:1702829-1702848 Msa1171780:CDS 35.0%
TTTCAGAGAGTGAGAACAAA+TGG - chr8_1:1702874-1702893 None:intergenic 35.0%
ATTGAAATGTGCATGCCATA+TGG + chr8_1:1702977-1702996 Msa1171780:intron 35.0%
! ATAATTTTGTGTTGCAGCCT+TGG + chr8_1:1703296-1703315 Msa1171780:intron 35.0%
ACAATGAAGCCTCAGTAATA+TGG + chr8_1:1703352-1703371 Msa1171780:three_prime_UTR 35.0%
AAGGTGGAAGGAAGAAAAAT+AGG + chr8_1:1703375-1703394 Msa1171780:three_prime_UTR 35.0%
AGGTGGAAGGAAGAAAAATA+GGG + chr8_1:1703376-1703395 Msa1171780:three_prime_UTR 35.0%
AACAATCAATGGCTACATGA+TGG - chr8_1:1703423-1703442 None:intergenic 35.0%
ACCAACACAACAACAATCAA+TGG - chr8_1:1703434-1703453 None:intergenic 35.0%
TTGCCTTCTTTCAACTAGTT+GGG + chr8_1:1703501-1703520 Msa1171780:three_prime_UTR 35.0%
! ACATGCATTATTTCTCTTGG+TGG - chr8_1:1703528-1703547 None:intergenic 35.0%
! GACACATGCATTATTTCTCT+TGG - chr8_1:1703531-1703550 None:intergenic 35.0%
ATGCATGTGTCCATTGTAAA+TGG + chr8_1:1703540-1703559 Msa1171780:three_prime_UTR 35.0%
GAAATATGTTTGTCTCTTCC+AGG - chr8_1:1703681-1703700 None:intergenic 35.0%
ACAACGCTGAAAGATTGTCA+AGG + chr8_1:1700309-1700328 Msa1171780:CDS 40.0%
AAGTTGAAGTCAGAGAAACG+TGG - chr8_1:1700428-1700447 None:intergenic 40.0%
ACGTTTCTCTGACTTCAACT+TGG + chr8_1:1700427-1700446 Msa1171780:CDS 40.0%
! ATATCAGCACCCCAATTTTC+AGG - chr8_1:1700455-1700474 None:intergenic 40.0%
! TGTGAAGGATTTAGCACTGA+TGG + chr8_1:1700613-1700632 Msa1171780:intron 40.0%
! TAGACCTTCCGGACATTTTT+CGG + chr8_1:1700820-1700839 Msa1171780:intron 40.0%
TAGAGAATCCTTGTCCTATG+AGG + chr8_1:1700854-1700873 Msa1171780:intron 40.0%
AATCCTTGTCCTATGAGGAT+AGG + chr8_1:1700859-1700878 Msa1171780:intron 40.0%
ATGGATTCAACTAGCATGCA+TGG - chr8_1:1701193-1701212 None:intergenic 40.0%
TCACACTGCTTATGCTTTCA+GGG - chr8_1:1701356-1701375 None:intergenic 40.0%
ATCACACTGCTTATGCTTTC+AGG - chr8_1:1701357-1701376 None:intergenic 40.0%
!! TTCACACCCTTTCTGGTTTA+TGG + chr8_1:1701856-1701875 Msa1171780:CDS 40.0%
!! TCACACCCTTTCTGGTTTAT+GGG + chr8_1:1701857-1701876 Msa1171780:CDS 40.0%
TGTAGACACAGTTGAAGACA+AGG + chr8_1:1702138-1702157 Msa1171780:CDS 40.0%
GTAGACACAGTTGAAGACAA+GGG + chr8_1:1702139-1702158 Msa1171780:CDS 40.0%
!!! GGTTTTATTGCTGTCTCTGA+AGG + chr8_1:1702262-1702281 Msa1171780:CDS 40.0%
TCATCTGATGGCAAAAGTAG+AGG - chr8_1:1702309-1702328 None:intergenic 40.0%
CAGCATCATTTGTCATCTGA+TGG - chr8_1:1702321-1702340 None:intergenic 40.0%
TCAGGTAATCTGGCTGATTA+GGG - chr8_1:1702402-1702421 None:intergenic 40.0%
GGTTCATTTGTCAGGTAATC+TGG - chr8_1:1702412-1702431 None:intergenic 40.0%
CATCCATAGGTTCATTTGTC+AGG - chr8_1:1702420-1702439 None:intergenic 40.0%
GACAAATGAACCTATGGATG+AGG + chr8_1:1702420-1702439 Msa1171780:CDS 40.0%
AACCTGATACAGAAAGCCTT+TGG - chr8_1:1702480-1702499 None:intergenic 40.0%
GACCTCGCATTTGAGTATTT+AGG + chr8_1:1702508-1702527 Msa1171780:CDS 40.0%
TCCCTAAATACTCAAATGCG+AGG - chr8_1:1702513-1702532 None:intergenic 40.0%
! AGGGAAGTATGCCAAAAACT+TGG + chr8_1:1702528-1702547 Msa1171780:CDS 40.0%
AAACTTGGAAACGCTTTCAG+TGG + chr8_1:1702543-1702562 Msa1171780:CDS 40.0%
GACTGCCAAGTAACAATGAA+TGG + chr8_1:1702718-1702737 Msa1171780:CDS 40.0%
TGTTAGCAAAAGAAAAGCCG+AGG + chr8_1:1702749-1702768 Msa1171780:CDS 40.0%
AGAGAGTGAGAACAAATGGA+GGG - chr8_1:1702870-1702889 None:intergenic 40.0%
CCACTAGTAAGTAGTAACCA+AGG - chr8_1:1703115-1703134 None:intergenic 40.0%
CCTTGGTTACTACTTACTAG+TGG + chr8_1:1703112-1703131 Msa1171780:intron 40.0%
GATGCCAACTTTGCCATATA+CGG - chr8_1:1703329-1703348 None:intergenic 40.0%
ATTACTGAGGCTTCATTGTC+AGG - chr8_1:1703351-1703370 None:intergenic 40.0%
TGAAGCCTCAGTAATATGGA+AGG + chr8_1:1703356-1703375 Msa1171780:three_prime_UTR 40.0%
TTCCACCTTCCATATTACTG+AGG - chr8_1:1703364-1703383 None:intergenic 40.0%
TCAGTAATATGGAAGGTGGA+AGG + chr8_1:1703363-1703382 Msa1171780:three_prime_UTR 40.0%
GGTGGAAGGAAGAAAAATAG+GGG + chr8_1:1703377-1703396 Msa1171780:three_prime_UTR 40.0%
! GCCATTGATTGTTGTTGTGT+TGG + chr8_1:1703430-1703449 Msa1171780:three_prime_UTR 40.0%
CTTGCCTTCTTTCAACTAGT+TGG + chr8_1:1703500-1703519 Msa1171780:three_prime_UTR 40.0%
ACGCTGAAAGATTGTCAAGG+AGG + chr8_1:1700312-1700331 Msa1171780:CDS 45.0%
!! GGGGTGCTGATATTCATTCA+TGG + chr8_1:1700462-1700481 Msa1171780:CDS 45.0%
! ACCCTTTTCTTGAGGAGTTG+AGG + chr8_1:1700507-1700526 Msa1171780:CDS 45.0%
GCCTCAACTCCTCAAGAAAA+GGG - chr8_1:1700511-1700530 None:intergenic 45.0%
AGCCTCAACTCCTCAAGAAA+AGG - chr8_1:1700512-1700531 None:intergenic 45.0%
!! AGGATTTAGCACTGATGGCT+TGG + chr8_1:1700618-1700637 Msa1171780:intron 45.0%
CAAGATCCTGGATTCGAATC+TGG + chr8_1:1700744-1700763 Msa1171780:intron 45.0%
CTTCATCCAGATTCGAATCC+AGG - chr8_1:1700753-1700772 None:intergenic 45.0%
TCTACCGAAAAATGTCCGGA+AGG - chr8_1:1700827-1700846 None:intergenic 45.0%
GGTCTCTACCGAAAAATGTC+CGG - chr8_1:1700831-1700850 None:intergenic 45.0%
AAGCCTATCCTCATAGGACA+AGG - chr8_1:1700865-1700884 None:intergenic 45.0%
TTGTCCTATGAGGATAGGCT+TGG + chr8_1:1700864-1700883 Msa1171780:intron 45.0%
TTAGCCAAGCCTATCCTCAT+AGG - chr8_1:1700871-1700890 None:intergenic 45.0%
TCGATGACAAAAGCGGTGAT+TGG + chr8_1:1701559-1701578 Msa1171780:CDS 45.0%
GATGCGCTTGAGAAACTTGT+CGG + chr8_1:1701657-1701676 Msa1171780:CDS 45.0%
TGCCAAGCTCACATAACTGA+GGG - chr8_1:1701761-1701780 None:intergenic 45.0%
AAGAGTCTTCACACCCTTTC+TGG + chr8_1:1701849-1701868 Msa1171780:CDS 45.0%
AGCCACCCATAAACCAGAAA+GGG - chr8_1:1701865-1701884 None:intergenic 45.0%
AAGCCACCCATAAACCAGAA+AGG - chr8_1:1701866-1701885 None:intergenic 45.0%
GTCCTGACTTCACTCATTTC+CGG + chr8_1:1702362-1702381 Msa1171780:CDS 45.0%
CAGGTAATCTGGCTGATTAG+GGG - chr8_1:1702401-1702420 None:intergenic 45.0%
GTCAGGTAATCTGGCTGATT+AGG - chr8_1:1702403-1702422 None:intergenic 45.0%
GGTCTTAACAACTGCTCCAA+AGG - chr8_1:1702446-1702465 None:intergenic 45.0%
AGACCTGCACTAAACTCCAA+AGG + chr8_1:1702461-1702480 Msa1171780:CDS 45.0%
!! AAGCCTTTGGAGTTTAGTGC+AGG - chr8_1:1702467-1702486 None:intergenic 45.0%
CTCCAAAGGCTTTCTGTATC+AGG + chr8_1:1702475-1702494 Msa1171780:CDS 45.0%
GAGATAAGGGACTGTCCATT+CGG + chr8_1:1702634-1702653 Msa1171780:CDS 45.0%
! TGCAGCACTTTTGTCTGGTT+TGG + chr8_1:1702660-1702679 Msa1171780:CDS 45.0%
AGAAGGAAGCGATGATAGTC+AGG + chr8_1:1702795-1702814 Msa1171780:CDS 45.0%
GAGAGTGAGAACAAATGGAG+GGG - chr8_1:1702869-1702888 None:intergenic 45.0%
CAGAGAGTGAGAACAAATGG+AGG - chr8_1:1702871-1702890 None:intergenic 45.0%
CCTCTTGAGCTTCAAAGTGT+AGG - chr8_1:1702910-1702929 None:intergenic 45.0%
!! CCTACACTTTGAAGCTCAAG+AGG + chr8_1:1702907-1702926 Msa1171780:three_prime_UTR 45.0%
!!! GGTTTTGGGTAGTTGTGAAG+TGG - chr8_1:1703006-1703025 None:intergenic 45.0%
CCATATACGGTCACATTCCA+AGG - chr8_1:1703316-1703335 None:intergenic 45.0%
CCTTGGAATGTGACCGTATA+TGG + chr8_1:1703313-1703332 Msa1171780:three_prime_UTR 45.0%
GTGACCGTATATGGCAAAGT+TGG + chr8_1:1703322-1703341 Msa1171780:three_prime_UTR 45.0%
AGCCTCAGTAATATGGAAGG+TGG + chr8_1:1703359-1703378 Msa1171780:three_prime_UTR 45.0%
GGACCCAACTAGTTGAAAGA+AGG - chr8_1:1703507-1703526 None:intergenic 45.0%
GGAGTTGAGGCTCAAGAGAA+TGG + chr8_1:1700520-1700539 Msa1171780:CDS 50.0%
CTTTCTCTGCTGAGCTGTGA+AGG + chr8_1:1700598-1700617 Msa1171780:intron 50.0%
CACACACAACTGCAAGATCC+TGG + chr8_1:1700732-1700751 Msa1171780:intron 50.0%
GTGATAGACGCTAGACCTTC+CGG + chr8_1:1700809-1700828 Msa1171780:intron 50.0%
TTGTTGTCTGTATGGCTGCC+TGG + chr8_1:1700894-1700913 Msa1171780:intron 50.0%
CGCTTGAGAAACTTGTCGGT+AGG + chr8_1:1701661-1701680 Msa1171780:CDS 50.0%
GCCAAGCTCACATAACTGAG+GGG - chr8_1:1701760-1701779 None:intergenic 50.0%
CTGCCAAGCTCACATAACTG+AGG - chr8_1:1701762-1701781 None:intergenic 50.0%
CAGTTATGTGAGCTTGGCAG+TGG + chr8_1:1701762-1701781 Msa1171780:CDS 50.0%
!! CACCCTTTCTGGTTTATGGG+TGG + chr8_1:1701860-1701879 Msa1171780:CDS 50.0%
TCCTAATCTTCGGCGCCTTT+GGG + chr8_1:1702007-1702026 Msa1171780:CDS 50.0%
CACAGTTGAAGACAAGGGAC+TGG + chr8_1:1702144-1702163 Msa1171780:CDS 50.0%
ACACGTAGCTCCTCAAGCAA+TGG - chr8_1:1702190-1702209 None:intergenic 50.0%
TGCACAACACCCTCGTCAAA+GGG - chr8_1:1702226-1702245 None:intergenic 50.0%
!! TTTGACGAGGGTGTTGTGCA+CGG + chr8_1:1702226-1702245 Msa1171780:CDS 50.0%
! TTGCTGTCTCTGAAGGATGC+CGG + chr8_1:1702269-1702288 Msa1171780:CDS 50.0%
AGAGGACGTAGTGAAGCTTC+CGG - chr8_1:1702291-1702310 None:intergenic 50.0%
AGCCGGAAATGAGTGAAGTC+AGG - chr8_1:1702367-1702386 None:intergenic 50.0%
GAACCTATGGATGAGGCCTT+TGG + chr8_1:1702427-1702446 Msa1171780:CDS 50.0%
! ACGCTTTCAGTGGCTTTTGC+CGG + chr8_1:1702553-1702572 Msa1171780:CDS 50.0%
TTTGCCGGAAGCAGTGACTT+TGG + chr8_1:1702568-1702587 Msa1171780:CDS 50.0%
TTGCCGGAAGCAGTGACTTT+GGG + chr8_1:1702569-1702588 Msa1171780:CDS 50.0%
CATCCCAAAGTCACTGCTTC+CGG - chr8_1:1702575-1702594 None:intergenic 50.0%
!! AAAAGTGCTGCATCGCCGAA+TGG - chr8_1:1702652-1702671 None:intergenic 50.0%
GTTGTGAAGTGGCTGCCATA+TGG - chr8_1:1702995-1703014 None:intergenic 50.0%
GCTCACATAACTGAGGGGCA+AGG - chr8_1:1701755-1701774 None:intergenic 55.0%
GCCCCTCAGTTATGTGAGCT+TGG + chr8_1:1701756-1701775 Msa1171780:CDS 55.0%
GTCCTAATCTTCGGCGCCTT+TGG + chr8_1:1702006-1702025 Msa1171780:CDS 55.0%
!! ACCCAAAGGCGCCGAAGATT+AGG - chr8_1:1702011-1702030 None:intergenic 55.0%
GACAAGGGACTGGAAGCTGT+TGG + chr8_1:1702154-1702173 Msa1171780:CDS 55.0%
TCCTGCAGATCCCTTTGACG+AGG + chr8_1:1702213-1702232 Msa1171780:CDS 55.0%
CCTGCAGATCCCTTTGACGA+GGG + chr8_1:1702214-1702233 Msa1171780:CDS 55.0%
GTGCACAACACCCTCGTCAA+AGG - chr8_1:1702227-1702246 None:intergenic 55.0%
!! TTGACGAGGGTGTTGTGCAC+GGG + chr8_1:1702227-1702246 Msa1171780:CDS 55.0%
GTGCACGGGGTTACTGAATC+AGG + chr8_1:1702241-1702260 Msa1171780:CDS 55.0%
TAGGGGTCATGATGCAGAGC+CGG - chr8_1:1702384-1702403 None:intergenic 55.0%
GCTCCAAAGGCCTCATCCAT+AGG - chr8_1:1702433-1702452 None:intergenic 55.0%
GGGATGCAGTCTGTACTTGC+TGG + chr8_1:1702589-1702608 Msa1171780:CDS 55.0%
! GGCGATGCAGCACTTTTGTC+TGG + chr8_1:1702655-1702674 Msa1171780:CDS 55.0%
TTCTGTTGCCGGCCCAAGAA+GGG + chr8_1:1702840-1702859 Msa1171780:CDS 55.0%
!! ATGGAGGGGCATCCCTTCTT+GGG - chr8_1:1702855-1702874 None:intergenic 55.0%
!! AATGGAGGGGCATCCCTTCT+TGG - chr8_1:1702856-1702875 None:intergenic 55.0%
CCCTCGTCAAAGGGATCTGC+AGG - chr8_1:1702217-1702236 None:intergenic 60.0%
!! TGACGAGGGTGTTGTGCACG+GGG + chr8_1:1702228-1702247 Msa1171780:CDS 60.0%
GTTCTGTTGCCGGCCCAAGA+AGG + chr8_1:1702839-1702858 Msa1171780:CDS 60.0%
!! AGGGGCATCCCTTCTTGGGC+CGG - chr8_1:1702851-1702870 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 1700203 1703704 1700203 ID=Msa1171780;Name=Msa1171780
chr8_1 mRNA 1700203 1703704 1700203 ID=Msa1171780-mRNA-1;Parent=Msa1171780;Name=Msa1171780-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.66|0.75|1|0.66|0.5|4|429|540
chr8_1 exon 1700203 1700564 1700203 ID=Msa1171780-mRNA-1:exon:638;Parent=Msa1171780-mRNA-1
chr8_1 exon 1701524 1702028 1701524 ID=Msa1171780-mRNA-1:exon:639;Parent=Msa1171780-mRNA-1
chr8_1 exon 1702136 1702928 1702136 ID=Msa1171780-mRNA-1:exon:640;Parent=Msa1171780-mRNA-1
chr8_1 exon 1703313 1703704 1703313 ID=Msa1171780-mRNA-1:exon:641;Parent=Msa1171780-mRNA-1
chr8_1 CDS 1700203 1700564 1700203 ID=Msa1171780-mRNA-1:cds;Parent=Msa1171780-mRNA-1
chr8_1 CDS 1701524 1702028 1701524 ID=Msa1171780-mRNA-1:cds;Parent=Msa1171780-mRNA-1
chr8_1 CDS 1702136 1702891 1702136 ID=Msa1171780-mRNA-1:cds;Parent=Msa1171780-mRNA-1
chr8_1 three_prime_UTR 1702892 1702928 1702892 ID=Msa1171780-mRNA-1:three_prime_utr;Parent=Msa1171780-mRNA-1
chr8_1 three_prime_UTR 1703313 1703704 1703313 ID=Msa1171780-mRNA-1:three_prime_utr;Parent=Msa1171780-mRNA-1
Gene Sequence

>Msa1171780

ATGGAGGAGTGTAAGAGAGACAAAGATGAAGTGTTGAAACAAGTTCTTGGAACAGTGAAGTCACAGAAAGACAGAAATTCAGTTTCTTTAGTTTGCAAACAGTGGTACAACGCTGAAAGATTGTCAAGGAGGAATGTTTTCATAGGTAACTGTTATTCTGTCACTCCTGAGATCTTGACAAGTAGATTTCCAAACATAAGAAGTGTTACACTCAAAGGGAAGCCACGTTTCTCTGACTTCAACTTGGTTCCTGAAAATTGGGGTGCTGATATTCATTCATGGTTGGTTGTTTTTGCTGAAAAGTACCCTTTTCTTGAGGAGTTGAGGCTCAAGAGAATGGTTGTTACTGATGAGAGTTTAGAGAATTTAACCGAGCTTGACATACAAGAGAATGACATCGATGACAAAAGCGGTGATTGGTTGAGTTGCTTTCCAGAAAGCTTTACATCATTGGAAGTATTGAACTTCGCTAACCTAAACAATGATGTAAATATCGATGCGCTTGAGAAACTTGTCGGTAGGTGCAAATCATTGAAGACTTTGAAGGTTAACAAAAGCGTAACGCTAGAACAGTTTCAAAGACTTCTTGTCCTTGCCCCTCAGTTATGTGAGCTTGGCAGTGGCTCATTTTCACAAGAGCTGACATGTCAGCAGTATTTAGAGCTCGAAAGTGCGTTCAACAATTGTAAGAGTCTTCACACCCTTTCTGGTTTATGGGTGGCTTCAGCATCAGCACAGTATATCCAACTTCAAGTTCTATACTCTGCATGCACAAATCTGACTTTCTTGAATTTTAGTTATGCTCTTGTTGACAGTGAAGATCTTACTGATCTTCTTGTTCATTGTCCTAATCTTCGGCGCCTTTGGGTTGTAGACACAGTTGAAGACAAGGGACTGGAAGCTGTTGGATCATATTGTCCATTGCTTGAGGAGCTACGTGTTTTTCCTGCAGATCCCTTTGACGAGGGTGTTGTGCACGGGGTTACTGAATCAGGTTTTATTGCTGTCTCTGAAGGATGCCGGAAGCTTCACTACGTCCTCTACTTTTGCCATCAGATGACAAATGATGCTGTTGCTACTGTTGTGCAAAACTGTCCTGACTTCACTCATTTCCGGCTCTGCATCATGACCCCTAATCAGCCAGATTACCTGACAAATGAACCTATGGATGAGGCCTTTGGAGCAGTTGTTAAGACCTGCACTAAACTCCAAAGGCTTTCTGTATCAGGTTATCTAACTGACCTCGCATTTGAGTATTTAGGGAAGTATGCCAAAAACTTGGAAACGCTTTCAGTGGCTTTTGCCGGAAGCAGTGACTTTGGGATGCAGTCTGTACTTGCTGGCTGTCCGAAGCTGAGAAAACTTGAGATAAGGGACTGTCCATTCGGCGATGCAGCACTTTTGTCTGGTTTGGAGAAGTATGAGTCAATGAGATCACTTTGGATGTCGGACTGCCAAGTAACAATGAATGGATGTAGATTGTTAGCAAAAGAAAAGCCGAGGTTGAATGTTGAAGTAATTAAGGAAGAAGGAAGCGATGATAGTCAGGCTGAAAAAGTTTATGTTTATCGTTCTGTTGCCGGCCCAAGAAGGGATGCCCCTCCATTTGTTCTCACTCTCTGA
Protein sequence

>Msa1171780

MEECKRDKDEVLKQVLGTVKSQKDRNSVSLVCKQWYNAERLSRRNVFIGNCYSVTPEILTSRFPNIRSVTLKGKPRFSDFNLVPENWGADIHSWLVVFAEKYPFLEELRLKRMVVTDESLENLTELDIQENDIDDKSGDWLSCFPESFTSLEVLNFANLNNDVNIDALEKLVGRCKSLKTLKVNKSVTLEQFQRLLVLAPQLCELGSGSFSQELTCQQYLELESAFNNCKSLHTLSGLWVASASAQYIQLQVLYSACTNLTFLNFSYALVDSEDLTDLLVHCPNLRRLWVVDTVEDKGLEAVGSYCPLLEELRVFPADPFDEGVVHGVTESGFIAVSEGCRKLHYVLYFCHQMTNDAVATVVQNCPDFTHFRLCIMTPNQPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGYLTDLAFEYLGKYAKNLETLSVAFAGSSDFGMQSVLAGCPKLRKLEIRDCPFGDAALLSGLEKYESMRSLWMSDCQVTMNGCRLLAKEKPRLNVEVIKEEGSDDSQAEKVYVYRSVAGPRRDAPPFVLTL*