Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207670 | XP_013457632.1 | 94.040 | 151 | 6 | 1 | 1 | 151 | 1 | 148 | 1.60e-94 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207670 | sp|Q6NLF7|LTPG7_ARATH | 43.709 | 151 | 74 | 5 | 6 | 150 | 5 | 150 | 6.81e-33 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616560 | Msa1207670 | 0.828182 | 1.036134e-54 | -8.615850e-47 |
| Msa0617560 | Msa1207670 | 0.810228 | 1.279696e-50 | -8.615850e-47 |
| Msa0655990 | Msa1207670 | 0.827495 | 1.516211e-54 | -8.615850e-47 |
| Msa0699920 | Msa1207670 | 0.812973 | 3.237424e-51 | -8.615850e-47 |
| Msa0719490 | Msa1207670 | 0.819015 | 1.449950e-52 | -8.615850e-47 |
| Msa0465680 | Msa1207670 | 0.816321 | 5.874209e-52 | -8.615850e-47 |
| Msa1085960 | Msa1207670 | 0.815150 | 1.071556e-51 | -8.615850e-47 |
| Msa1207670 | Msa1257870 | 0.825493 | 4.547940e-54 | -8.615850e-47 |
| Msa1207670 | Msa1295020 | 0.809025 | 2.320285e-50 | -8.615850e-47 |
| Msa1207670 | Msa1330000 | 0.805976 | 1.029326e-49 | -8.615850e-47 |
| Msa1207670 | Msa1363220 | 0.849953 | 2.321570e-60 | -8.615850e-47 |
| Msa0506530 | Msa1207670 | 0.812549 | 4.009732e-51 | -8.615850e-47 |
| Msa0563140 | Msa1207670 | -0.806834 | 6.785210e-50 | -8.615850e-47 |
| Msa0564490 | Msa1207670 | -0.820334 | 7.244428e-53 | -8.615850e-47 |
| Msa0576990 | Msa1207670 | 0.840900 | 6.579147e-58 | -8.615850e-47 |
| Msa0968320 | Msa1207670 | 0.806127 | 9.566527e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207670 | MtrunA17_Chr4g0056621 | 94.040 | 151 | 6 | 1 | 1 | 151 | 1 | 148 | 1.47e-98 | 280 |
| Msa1207670 | MtrunA17_Chr5g0398841 | 44.000 | 125 | 64 | 5 | 31 | 151 | 34 | 156 | 3.79e-27 | 99.4 |
| Msa1207670 | MtrunA17_Chr5g0398821 | 36.242 | 149 | 88 | 5 | 5 | 150 | 9 | 153 | 1.40e-24 | 92.8 |
| Msa1207670 | MtrunA17_Chr5g0398831 | 38.095 | 147 | 77 | 6 | 9 | 145 | 12 | 154 | 8.68e-24 | 90.9 |
| Msa1207670 | MtrunA17_Chr4g0003641 | 34.906 | 106 | 58 | 4 | 6 | 108 | 10 | 107 | 5.05e-12 | 59.7 |
| Msa1207670 | MtrunA17_Chr6g0478571 | 29.545 | 88 | 61 | 1 | 33 | 119 | 52 | 139 | 1.12e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207670 | AT1G62790.1 | 43.709 | 151 | 74 | 5 | 6 | 150 | 5 | 150 | 6.92e-34 | 116 |
| Msa1207670 | AT1G62790.2 | 43.333 | 150 | 75 | 5 | 6 | 150 | 5 | 149 | 4.32e-33 | 114 |
| Msa1207670 | AT1G70250.1 | 44.554 | 101 | 51 | 2 | 11 | 110 | 4 | 100 | 4.58e-23 | 94.7 |
| Msa1207670 | AT1G73550.1 | 32.667 | 150 | 85 | 6 | 5 | 144 | 5 | 148 | 7.77e-17 | 72.8 |
| Msa1207670 | AT1G73560.1 | 34.615 | 130 | 78 | 3 | 23 | 150 | 22 | 146 | 3.55e-16 | 71.2 |
| Msa1207670 | AT1G18280.1 | 33.333 | 108 | 60 | 2 | 11 | 106 | 7 | 114 | 3.34e-14 | 66.6 |
| Msa1207670 | AT4G12360.1 | 33.884 | 121 | 75 | 4 | 34 | 150 | 42 | 161 | 1.18e-13 | 64.7 |
| Msa1207670 | AT1G73550.2 | 32.456 | 114 | 70 | 4 | 5 | 113 | 5 | 116 | 6.81e-13 | 62.4 |
Find 40 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTGAACTCTGATTCAATT+TGG | 0.199864 | 8_1:+65431033 | Msa1207670:three_prime_UTR |
| CTGAGTAGTATTGATGTTAA+AGG | 0.279278 | 8_1:-65426066 | None:intergenic |
| ATGTAATTTCATACATTGAT+TGG | 0.355871 | 8_1:+65430962 | Msa1207670:three_prime_UTR |
| TACTTCCGGCGGGTCCCCAC+CGG | 0.360570 | 8_1:+65426858 | Msa1207670:CDS |
| AGTGAACTCTGATTCAATTT+GGG | 0.369936 | 8_1:+65431034 | Msa1207670:three_prime_UTR |
| CGGCGTTTGACTTGACAATA+AGG | 0.378858 | 8_1:+65425665 | Msa1207670:five_prime_UTR |
| TAGGTGGTTTGGTTGAATTA+AGG | 0.397792 | 8_1:-65425956 | None:intergenic |
| TGTAACCTCTTCAATGCTCC+TGG | 0.398257 | 8_1:+65426032 | Msa1207670:CDS |
| ATATATCATATATAAATATA+CGG | 0.406464 | 8_1:-65431129 | None:intergenic |
| GCTACAATAGGTGGTGATAA+AGG | 0.439110 | 8_1:+65430812 | Msa1207670:intron |
| ACAGCAAGAACTAGGTGGTT+TGG | 0.446180 | 8_1:-65425967 | None:intergenic |
| TCAGCTCCAGCTCCTACTTC+CGG | 0.447064 | 8_1:+65426844 | Msa1207670:CDS |
| ATTCATCATGCAGCTACAAT+AGG | 0.449893 | 8_1:+65430800 | Msa1207670:intron |
| AATACAGTAGAGGTTTAAGA+AGG | 0.453213 | 8_1:-65430921 | None:intergenic |
| GGTAATCAGCACATGGAACT+AGG | 0.464146 | 8_1:-65425935 | None:intergenic |
| TGTGTCATTGATGGTAGGTA+TGG | 0.480773 | 8_1:+65425851 | Msa1207670:CDS |
| ATGATGTTCAATTAGAAAAG+TGG | 0.491731 | 8_1:+65430890 | Msa1207670:exon |
| ATTGGATCACAGCAAGAACT+AGG | 0.493116 | 8_1:-65425975 | None:intergenic |
| GCAGGCAGAGTCTCATTCAC+TGG | 0.496932 | 8_1:+65430839 | Msa1207670:CDS |
| TTTATATATGATATATGATG+TGG | 0.527551 | 8_1:+65431136 | Msa1207670:three_prime_UTR |
| TTAAAGGTTGCAAGCAAACC+AGG | 0.530324 | 8_1:-65426050 | None:intergenic |
| GGTGGTGATAAAGGAGCTGC+AGG | 0.532328 | 8_1:+65430821 | Msa1207670:CDS |
| ACTAGGTTTGTAGCACATGA+AGG | 0.536694 | 8_1:-65425918 | None:intergenic |
| CTCCAGCTCCTACTTCCGGC+GGG | 0.538414 | 8_1:+65426848 | Msa1207670:CDS |
| TAAATAAATAAATACAGTAG+AGG | 0.569488 | 8_1:-65430931 | None:intergenic |
| TTACATACTGTGTTTGCAAG+TGG | 0.570284 | 8_1:-65426132 | None:intergenic |
| CTTTAACATCAATACTACTC+AGG | 0.573773 | 8_1:+65426067 | Msa1207670:CDS |
| ATACAGTAGAGGTTTAAGAA+GGG | 0.575037 | 8_1:-65430920 | None:intergenic |
| GCTCCAGCTCCTACTTCCGG+CGG | 0.581336 | 8_1:+65426847 | Msa1207670:CDS |
| CATCATGCAGCTACAATAGG+TGG | 0.590441 | 8_1:+65430803 | Msa1207670:intron |
| GAAGAAGATTCTTACCCGGT+GGG | 0.613228 | 8_1:-65426873 | None:intergenic |
| CTAGGTTTGTAGCACATGAA+GGG | 0.615440 | 8_1:-65425917 | None:intergenic |
| TGTGTTGATAAATCTACTTG+TGG | 0.625177 | 8_1:+65431092 | Msa1207670:three_prime_UTR |
| GCAAACCAGGAGCATTGAAG+AGG | 0.650949 | 8_1:-65426037 | None:intergenic |
| AAGAAGATTCTTACCCGGTG+GGG | 0.685476 | 8_1:-65426872 | None:intergenic |
| GAATTAAGGTAATCAGCACA+TGG | 0.692671 | 8_1:-65425942 | None:intergenic |
| CTTGCGTTGAGTCGTAACTG+TGG | 0.693927 | 8_1:+65426092 | Msa1207670:CDS |
| GGATCACAGCAAGAACTAGG+TGG | 0.697170 | 8_1:-65425972 | None:intergenic |
| TTTGCAAGTGGTAAGATCAG+TGG | 0.711684 | 8_1:-65426120 | None:intergenic |
| GTTGATGATCAACACTACAG+AGG | 0.726445 | 8_1:+65425878 | Msa1207670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAACTTTTTTTTTTCT+AGG | - | chr8_1:65426374-65426393 | None:intergenic | 10.0% |
| !!! | GTTTATGAAATTTAAAATTT+GGG | - | chr8_1:65427628-65427647 | None:intergenic | 10.0% |
| !!! | TGTTTATGAAATTTAAAATT+TGG | - | chr8_1:65427629-65427648 | None:intergenic | 10.0% |
| !! | AAAATATTTCATAAGTTAAT+AGG | - | chr8_1:65427818-65427837 | None:intergenic | 10.0% |
| !! | TTAAAAAAATAAACAAGATT+TGG | - | chr8_1:65428437-65428456 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTGTTATATTGT+TGG | - | chr8_1:65428846-65428865 | None:intergenic | 10.0% |
| !!! | GTTATTTTTATTTAAAATTG+AGG | + | chr8_1:65429088-65429107 | Msa1207670:intron | 10.0% |
| !! | AATTAAATTTAATGTATTGT+AGG | - | chr8_1:65429506-65429525 | None:intergenic | 10.0% |
| !! | TTATTCAACAACAAAAAAAA+TGG | + | chr8_1:65425806-65425825 | Msa1207670:exon | 15.0% |
| !!! | CAAAATTTTGACAATAAATT+TGG | + | chr8_1:65426424-65426443 | Msa1207670:intron | 15.0% |
| !!! | AACGCATTTTTTTTTTTTTA+GGG | + | chr8_1:65426743-65426762 | Msa1207670:intron | 15.0% |
| !! | ATACATCATTTATCATTTAT+TGG | - | chr8_1:65427192-65427211 | None:intergenic | 15.0% |
| !!! | TTTTAATCTTCTTCTATTTT+TGG | - | chr8_1:65427479-65427498 | None:intergenic | 15.0% |
| !! | CAAAACAATTTCTTATAATA+AGG | - | chr8_1:65428234-65428253 | None:intergenic | 15.0% |
| !! | ACAATTATTAATAATTGTGT+CGG | + | chr8_1:65428526-65428545 | Msa1207670:intron | 15.0% |
| !!! | AAGTTTTTAAGTTTTTTCTT+AGG | - | chr8_1:65428616-65428635 | None:intergenic | 15.0% |
| !!! | ATAAATAATCATGATTAGTT+TGG | - | chr8_1:65428813-65428832 | None:intergenic | 15.0% |
| !!! | TTATAGAAAATGTTGTTTAA+AGG | + | chr8_1:65428907-65428926 | Msa1207670:intron | 15.0% |
| !! | TAAGAAAAAACATATTTGAA+AGG | + | chr8_1:65429284-65429303 | Msa1207670:intron | 15.0% |
| !! | AAAAACAAAAAGTAAACAAT+AGG | - | chr8_1:65429718-65429737 | None:intergenic | 15.0% |
| !!! | TTTATTTTAATAATGGACAA+TGG | + | chr8_1:65429787-65429806 | Msa1207670:intron | 15.0% |
| !!! | TTATTTTAATAATGGACAAT+GGG | + | chr8_1:65429788-65429807 | Msa1207670:intron | 15.0% |
| !!! | AAAGAACAAGTTTTTAATTT+TGG | + | chr8_1:65430114-65430133 | Msa1207670:intron | 15.0% |
| !!! | AAGAACAAGTTTTTAATTTT+GGG | + | chr8_1:65430115-65430134 | Msa1207670:intron | 15.0% |
| !! | TTAGAAATTGTAATAATAAG+TGG | - | chr8_1:65430765-65430784 | None:intergenic | 15.0% |
| !! | TAAATAAATAAATACAGTAG+AGG | - | chr8_1:65430934-65430953 | None:intergenic | 15.0% |
| !! | TTTATATATGATATATGATG+TGG | + | chr8_1:65431136-65431155 | Msa1207670:three_prime_UTR | 15.0% |
| !! | ATATTTGTCACATCAATTAA+AGG | - | chr8_1:65426181-65426200 | None:intergenic | 20.0% |
| !! | TTGATTCAATTCTTAATTTC+TGG | - | chr8_1:65426310-65426329 | None:intergenic | 20.0% |
| !! | AATGCAGTTTATTAATTCTA+TGG | - | chr8_1:65426598-65426617 | None:intergenic | 20.0% |
| !!! | GAACGCATTTTTTTTTTTTT+AGG | + | chr8_1:65426742-65426761 | Msa1207670:intron | 20.0% |
| !!! | ACGCATTTTTTTTTTTTTAG+GGG | + | chr8_1:65426744-65426763 | Msa1207670:intron | 20.0% |
| !!! | ATTTTTTTTTTTTTAGGGGA+AGG | + | chr8_1:65426748-65426767 | Msa1207670:intron | 20.0% |
| !! | TTATTCAAACAAAAAGGTAA+AGG | - | chr8_1:65426813-65426832 | None:intergenic | 20.0% |
| !! | CTGAAATTATTCAAACAAAA+AGG | - | chr8_1:65426819-65426838 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATAATTTCAGA+TGG | + | chr8_1:65426820-65426839 | Msa1207670:intron | 20.0% |
| !!! | AAGAGTATTCTATTTTATCA+AGG | - | chr8_1:65427446-65427465 | None:intergenic | 20.0% |
| !! | GTAAATTTATTCTTGTGTAT+TGG | - | chr8_1:65427526-65427545 | None:intergenic | 20.0% |
| !! | AATAGAGTGAACAATTATAT+TGG | + | chr8_1:65427659-65427678 | Msa1207670:intron | 20.0% |
| !! | CATAAACAATTATTTCATAC+CGG | + | chr8_1:65427713-65427732 | Msa1207670:intron | 20.0% |
| !!! | ATCATTATCATTGTTTTTGA+AGG | + | chr8_1:65427740-65427759 | Msa1207670:intron | 20.0% |
| !! | GAATATCTTATATTCTTACT+TGG | + | chr8_1:65427913-65427932 | Msa1207670:intron | 20.0% |
| !! | TAATAAGAAAATTCGAATGT+TGG | + | chr8_1:65427957-65427976 | Msa1207670:intron | 20.0% |
| !! | AATAAGAAAATTCGAATGTT+GGG | + | chr8_1:65427958-65427977 | Msa1207670:intron | 20.0% |
| !! | AATTGTACATTAAAAAGTTG+TGG | - | chr8_1:65428395-65428414 | None:intergenic | 20.0% |
| !! | AAATAAACAAGATTTGGAAA+AGG | - | chr8_1:65428431-65428450 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTAGGTAACTATT+TGG | - | chr8_1:65428605-65428624 | None:intergenic | 20.0% |
| !! | TAACGTTTGAAAATTATGAA+CGG | + | chr8_1:65428714-65428733 | Msa1207670:intron | 20.0% |
| !!! | TTGCACTTTTTAAATGATAA+AGG | + | chr8_1:65428979-65428998 | Msa1207670:intron | 20.0% |
| !! | CTAGTATAGTATTATATTGT+TGG | - | chr8_1:65429240-65429259 | None:intergenic | 20.0% |
| !!! | CACACATAATTGATATATTT+TGG | - | chr8_1:65429576-65429595 | None:intergenic | 20.0% |
| !! | TCATTAAACATATATCATGT+GGG | - | chr8_1:65429764-65429783 | None:intergenic | 20.0% |
| !! | ATCATTAAACATATATCATG+TGG | - | chr8_1:65429765-65429784 | None:intergenic | 20.0% |
| !!! | TAGATTTTGAGAAAATGAAT+GGG | + | chr8_1:65429937-65429956 | Msa1207670:intron | 20.0% |
| !!! | GATAGTACTGTTTTTTAAAT+GGG | + | chr8_1:65430407-65430426 | Msa1207670:intron | 20.0% |
| !!! | ATAGTACTGTTTTTTAAATG+GGG | + | chr8_1:65430408-65430427 | Msa1207670:intron | 20.0% |
| !! | CTTAGACAAAAAATCATTAA+TGG | - | chr8_1:65430469-65430488 | None:intergenic | 20.0% |
| !!! | ATTCTCTTTTATACTCTTAT+TGG | + | chr8_1:65430862-65430881 | Msa1207670:CDS | 20.0% |
| !! | ATGTAATTTCATACATTGAT+TGG | + | chr8_1:65430962-65430981 | Msa1207670:three_prime_UTR | 20.0% |
| !!! | AAATTTGATTTTAGAGTTCG+TGG | - | chr8_1:65425780-65425799 | None:intergenic | 25.0% |
| !!! | GTTTCAACTGTTTTTTTGAT+TGG | - | chr8_1:65425996-65426015 | None:intergenic | 25.0% |
| !! | GTGACAAATATTTGACTTAT+TGG | + | chr8_1:65426190-65426209 | Msa1207670:intron | 25.0% |
| !!! | TGTGTCGGATTTTTTTTTAT+TGG | + | chr8_1:65426230-65426249 | Msa1207670:intron | 25.0% |
| !!! | CACTTTTTTTTCCATCAATT+TGG | + | chr8_1:65426631-65426650 | Msa1207670:intron | 25.0% |
| ! | AAAAAACATCAAATGTTTGC+TGG | + | chr8_1:65426707-65426726 | Msa1207670:intron | 25.0% |
| ! | AGTCTATCAATTAAGTCTTT+CGG | + | chr8_1:65427126-65427145 | Msa1207670:intron | 25.0% |
| ! | CTAATTTCAATTCATTGTGT+TGG | - | chr8_1:65427280-65427299 | None:intergenic | 25.0% |
| ! | AATAAGAGATCAAATTTGAG+AGG | + | chr8_1:65427323-65427342 | Msa1207670:intron | 25.0% |
| ! | ATAAGAGATCAAATTTGAGA+GGG | + | chr8_1:65427324-65427343 | Msa1207670:intron | 25.0% |
| ! | TATCAAGGTAAAAACATTAC+TGG | - | chr8_1:65427431-65427450 | None:intergenic | 25.0% |
| ! | TAAATTTACCCCTTAGAATT+AGG | + | chr8_1:65427537-65427556 | Msa1207670:intron | 25.0% |
| !! | TTGTCTTTTCCTAATTCTAA+GGG | - | chr8_1:65427549-65427568 | None:intergenic | 25.0% |
| !! | TTGTCTTTTCCTAATTCTAA+GGG | - | chr8_1:65427549-65427568 | None:intergenic | 25.0% |
| !! | AACAATGATAATGATAACAC+CGG | - | chr8_1:65427735-65427754 | None:intergenic | 25.0% |
| !! | ATTTTCTTATTAAACCAGGT+TGG | - | chr8_1:65427949-65427968 | None:intergenic | 25.0% |
| !! | TCGAATTTTCTTATTAAACC+AGG | - | chr8_1:65427953-65427972 | None:intergenic | 25.0% |
| !!! | TTTTTCTTTTTGAGAGGTTA+AGG | - | chr8_1:65428302-65428321 | None:intergenic | 25.0% |
| !!! | AATTTGTACTTTTTTTGCAC+CGG | - | chr8_1:65428326-65428345 | None:intergenic | 25.0% |
| !!! | AAAAATTGTTGCTTTAGCAT+TGG | - | chr8_1:65428350-65428369 | None:intergenic | 25.0% |
| !!! | TATTAATAATTGTGTCGGTT+TGG | + | chr8_1:65428531-65428550 | Msa1207670:intron | 25.0% |
| ! | TAAATAAACCAGTGAAAAGA+CGG | + | chr8_1:65428653-65428672 | Msa1207670:intron | 25.0% |
| !!! | CAACTCATTTTAACTCTTTT+GGG | - | chr8_1:65429138-65429157 | None:intergenic | 25.0% |
| !!! | ACAACTCATTTTAACTCTTT+TGG | - | chr8_1:65429139-65429158 | None:intergenic | 25.0% |
| ! | AAACATATTTGAAAGGCTAT+TGG | + | chr8_1:65429291-65429310 | Msa1207670:intron | 25.0% |
| ! | TTCATAGTGAAAAATTAGTG+TGG | + | chr8_1:65429402-65429421 | Msa1207670:intron | 25.0% |
| ! | GCTATCTAATCTAACAATAT+TGG | - | chr8_1:65429548-65429567 | None:intergenic | 25.0% |
| ! | TATTGTTAGATTAGATAGCA+TGG | + | chr8_1:65429549-65429568 | Msa1207670:intron | 25.0% |
| ! | CATTAAACATATATCATGTG+GGG | - | chr8_1:65429763-65429782 | None:intergenic | 25.0% |
| !!! | CTAGATTTTGAGAAAATGAA+TGG | + | chr8_1:65429936-65429955 | Msa1207670:intron | 25.0% |
| !!! | AGATTTTGAGAAAATGAATG+GGG | + | chr8_1:65429938-65429957 | Msa1207670:intron | 25.0% |
| ! | GAATCGTTAATTAATGTTCT+TGG | - | chr8_1:65429995-65430014 | None:intergenic | 25.0% |
| !! | TTGGTTTATGTTTTCCTATA+AGG | + | chr8_1:65430062-65430081 | Msa1207670:intron | 25.0% |
| !!! | GGATAGTACTGTTTTTTAAA+TGG | + | chr8_1:65430406-65430425 | Msa1207670:intron | 25.0% |
| !!! | TAGTACTGTTTTTTAAATGG+GGG | + | chr8_1:65430409-65430428 | Msa1207670:intron | 25.0% |
| ! | GACAAATATTACTTAGAACT+CGG | - | chr8_1:65430600-65430619 | None:intergenic | 25.0% |
| ! | GATTATACATGTATAGTTCT+TGG | - | chr8_1:65430685-65430704 | None:intergenic | 25.0% |
| ! | TTGTAATAATAAGTGGCAAT+TGG | - | chr8_1:65430758-65430777 | None:intergenic | 25.0% |
| !! | ACTTTTCTAATTGAACATCA+TGG | - | chr8_1:65430891-65430910 | None:intergenic | 25.0% |
| ! | ATGATGTTCAATTAGAAAAG+TGG | + | chr8_1:65430890-65430909 | Msa1207670:exon | 25.0% |
| !! | CTGAGTAGTATTGATGTTAA+AGG | - | chr8_1:65426069-65426088 | None:intergenic | 30.0% |
| CTTTAACATCAATACTACTC+AGG | + | chr8_1:65426067-65426086 | Msa1207670:CDS | 30.0% | |
| ACTTCTTTGTATGATTGTGT+CGG | + | chr8_1:65426215-65426234 | Msa1207670:intron | 30.0% | |
| TTTCTAGATCTAGTGAGAAA+AGG | + | chr8_1:65426280-65426299 | Msa1207670:intron | 30.0% | |
| TTCTAGATCTAGTGAGAAAA+GGG | + | chr8_1:65426281-65426300 | Msa1207670:intron | 30.0% | |
| AAGATGTTACAGAAAAACGT+TGG | + | chr8_1:65426672-65426691 | Msa1207670:intron | 30.0% | |
| ! | AAGAAGTGAAAATCAAGTTG+AGG | - | chr8_1:65426906-65426925 | None:intergenic | 30.0% |
| AGACCACAATTATTTATGAG+TGG | + | chr8_1:65427225-65427244 | Msa1207670:intron | 30.0% | |
| CATCCACTCATAAATAATTG+TGG | - | chr8_1:65427231-65427250 | None:intergenic | 30.0% | |
| CACAATTATTTATGAGTGGA+TGG | + | chr8_1:65427229-65427248 | Msa1207670:intron | 30.0% | |
| ! | TGTCTTTTCCTAATTCTAAG+GGG | - | chr8_1:65427548-65427567 | None:intergenic | 30.0% |
| ! | GTTGTCTTTTCCTAATTCTA+AGG | - | chr8_1:65427550-65427569 | None:intergenic | 30.0% |
| ! | TTCTAAGGGGTAAATATCTT+TGG | - | chr8_1:65427581-65427600 | None:intergenic | 30.0% |
| GATATTTACCCCTTAGAATT+AGG | + | chr8_1:65427583-65427602 | Msa1207670:intron | 30.0% | |
| ! | TGTCTTTTCCTAATTCTAAG+GGG | - | chr8_1:65427548-65427567 | None:intergenic | 30.0% |
| ! | GTTGTCTTTTCCTAATTCTA+AGG | - | chr8_1:65427550-65427569 | None:intergenic | 30.0% |
| TGGACTTAACTTATCATTGA+TGG | + | chr8_1:65427679-65427698 | Msa1207670:intron | 30.0% | |
| AAGGAGCTTGCAATAATATT+GGG | - | chr8_1:65428283-65428302 | None:intergenic | 30.0% | |
| TAAGGAGCTTGCAATAATAT+TGG | - | chr8_1:65428284-65428303 | None:intergenic | 30.0% | |
| CCATGTACTCACTTATTATA+AGG | - | chr8_1:65428575-65428594 | None:intergenic | 30.0% | |
| CCTTATAATAAGTGAGTACA+TGG | + | chr8_1:65428572-65428591 | Msa1207670:intron | 30.0% | |
| AAATAAACCAGTGAAAAGAC+GGG | + | chr8_1:65428654-65428673 | Msa1207670:intron | 30.0% | |
| !!! | TCATTTTAACTCTTTTGGGT+TGG | - | chr8_1:65429134-65429153 | None:intergenic | 30.0% |
| !!! | AGTGTGGATTTTGAAATTTG+AGG | + | chr8_1:65429418-65429437 | Msa1207670:intron | 30.0% |
| !!! | GTGTGGATTTTGAAATTTGA+GGG | + | chr8_1:65429419-65429438 | Msa1207670:intron | 30.0% |
| !!! | TGTGGATTTTGAAATTTGAG+GGG | + | chr8_1:65429420-65429439 | Msa1207670:intron | 30.0% |
| TAATCTAACAATATTGGCGT+TGG | - | chr8_1:65429542-65429561 | None:intergenic | 30.0% | |
| ! | TTTTACGTGGCATTTAACAT+GGG | + | chr8_1:65429600-65429619 | Msa1207670:intron | 30.0% |
| AAATGGCAAGGAAAAGAAAA+TGG | - | chr8_1:65429862-65429881 | None:intergenic | 30.0% | |
| AAATTGTAGATCTGGACAAA+GGG | - | chr8_1:65429890-65429909 | None:intergenic | 30.0% | |
| AAAGCTTCAAATTGTAGATC+TGG | - | chr8_1:65429898-65429917 | None:intergenic | 30.0% | |
| ! | AGAACAATCTTTTAACCAAG+AGG | + | chr8_1:65430034-65430053 | Msa1207670:intron | 30.0% |
| ! | TTTTAACCAAGAGGAAGTTT+TGG | + | chr8_1:65430043-65430062 | Msa1207670:intron | 30.0% |
| ! | ATGTTTTCCTATAAGGTTTC+TGG | + | chr8_1:65430069-65430088 | Msa1207670:intron | 30.0% |
| ! | TGTTTTCCTATAAGGTTTCT+GGG | + | chr8_1:65430070-65430089 | Msa1207670:intron | 30.0% |
| AATTCACAAACACTCAACAT+GGG | - | chr8_1:65430200-65430219 | None:intergenic | 30.0% | |
| !!! | AGTACTGTTTTTTAAATGGG+GGG | + | chr8_1:65430410-65430429 | Msa1207670:intron | 30.0% |
| AAATATTACTTAGAACTCGG+TGG | - | chr8_1:65430597-65430616 | None:intergenic | 30.0% | |
| ATGATTAGATGTACTTCACA+AGG | - | chr8_1:65430713-65430732 | None:intergenic | 30.0% | |
| TTGTGAAGTACATCTAATCA+TGG | + | chr8_1:65430712-65430731 | Msa1207670:intron | 30.0% | |
| ATACAGTAGAGGTTTAAGAA+GGG | - | chr8_1:65430923-65430942 | None:intergenic | 30.0% | |
| AATACAGTAGAGGTTTAAGA+AGG | - | chr8_1:65430924-65430943 | None:intergenic | 30.0% | |
| TAGTGAACTCTGATTCAATT+TGG | + | chr8_1:65431033-65431052 | Msa1207670:three_prime_UTR | 30.0% | |
| AGTGAACTCTGATTCAATTT+GGG | + | chr8_1:65431034-65431053 | Msa1207670:three_prime_UTR | 30.0% | |
| ! | TGTGTTGATAAATCTACTTG+TGG | + | chr8_1:65431092-65431111 | Msa1207670:three_prime_UTR | 30.0% |
| !! | CATCACTTTTGTGTCATTGA+TGG | + | chr8_1:65425842-65425861 | Msa1207670:CDS | 35.0% |
| !! | ACTTTTGTGTCATTGATGGT+AGG | + | chr8_1:65425846-65425865 | Msa1207670:CDS | 35.0% |
| GAATTAAGGTAATCAGCACA+TGG | - | chr8_1:65425945-65425964 | None:intergenic | 35.0% | |
| !! | TAGGTGGTTTGGTTGAATTA+AGG | - | chr8_1:65425959-65425978 | None:intergenic | 35.0% |
| TTACATACTGTGTTTGCAAG+TGG | - | chr8_1:65426135-65426154 | None:intergenic | 35.0% | |
| TCTCACTAGATCTAGAAAAC+TGG | - | chr8_1:65426278-65426297 | None:intergenic | 35.0% | |
| TCTAGATCTAGTGAGAAAAG+GGG | + | chr8_1:65426282-65426301 | Msa1207670:intron | 35.0% | |
| TACCATTCCTTCGTTGTATT+TGG | + | chr8_1:65426342-65426361 | Msa1207670:intron | 35.0% | |
| ATCCAAATACAACGAAGGAA+TGG | - | chr8_1:65426347-65426366 | None:intergenic | 35.0% | |
| GAGAAATCCAAATACAACGA+AGG | - | chr8_1:65426352-65426371 | None:intergenic | 35.0% | |
| GGTTAATCATAGTGTAGCAA+AGG | - | chr8_1:65426577-65426596 | None:intergenic | 35.0% | |
| ! | AATTTGGTCCATCTGGTTTA+AGG | + | chr8_1:65426647-65426666 | Msa1207670:intron | 35.0% |
| ATGTGAAGAAGATTCTTACC+CGG | - | chr8_1:65426880-65426899 | None:intergenic | 35.0% | |
| !! | AAGTGAAAATCAAGTTGAGG+AGG | - | chr8_1:65426903-65426922 | None:intergenic | 35.0% |
| ! | TTGTGTTGGTCTCAAAATTG+TGG | - | chr8_1:65427266-65427285 | None:intergenic | 35.0% |
| !! | TCTTATTAAACCAGGTTGGT+TGG | - | chr8_1:65427945-65427964 | None:intergenic | 35.0% |
| ACCTCTCAAAAAGAAAAAGC+CGG | + | chr8_1:65428304-65428323 | Msa1207670:intron | 35.0% | |
| !! | TAATTGTGTCGGTTTGGATA+TGG | + | chr8_1:65428537-65428556 | Msa1207670:intron | 35.0% |
| CTATAAAAAGAGCGGAAAGA+CGG | - | chr8_1:65428691-65428710 | None:intergenic | 35.0% | |
| CGTTAGCACTATAAAAAGAG+CGG | - | chr8_1:65428699-65428718 | None:intergenic | 35.0% | |
| ! | ATTTTTCACTATGAACCACC+TGG | - | chr8_1:65429397-65429416 | None:intergenic | 35.0% |
| ! | TTATGTGTGTGACTTTTACG+TGG | + | chr8_1:65429587-65429606 | Msa1207670:intron | 35.0% |
| ! | CTTTTACGTGGCATTTAACA+TGG | + | chr8_1:65429599-65429618 | Msa1207670:intron | 35.0% |
| TAATTCATCTTTCCCATGGT+GGG | - | chr8_1:65429641-65429660 | None:intergenic | 35.0% | |
| ATAATTCATCTTTCCCATGG+TGG | - | chr8_1:65429642-65429661 | None:intergenic | 35.0% | |
| ACCATGGGAAAGATGAATTA+TGG | + | chr8_1:65429641-65429660 | Msa1207670:intron | 35.0% | |
| ! | CATGTGGGGTCATAATTTTT+GGG | - | chr8_1:65429749-65429768 | None:intergenic | 35.0% |
| ! | TCATGTGGGGTCATAATTTT+TGG | - | chr8_1:65429750-65429769 | None:intergenic | 35.0% |
| CAAATTGTAGATCTGGACAA+AGG | - | chr8_1:65429891-65429910 | None:intergenic | 35.0% | |
| CATAAACCAAAACTTCCTCT+TGG | - | chr8_1:65430052-65430071 | None:intergenic | 35.0% | |
| TATGTACCCAGAAACCTTAT+AGG | - | chr8_1:65430079-65430098 | None:intergenic | 35.0% | |
| GAATTCACAAACACTCAACA+TGG | - | chr8_1:65430201-65430220 | None:intergenic | 35.0% | |
| AGCAATTAGGAAACAAGTGA+AGG | + | chr8_1:65430265-65430284 | Msa1207670:intron | 35.0% | |
| !!! | GGAGAAAAGTACTGGTTTTT+TGG | + | chr8_1:65430380-65430399 | Msa1207670:intron | 35.0% |
| !!! | AAAGTACTGGTTTTTTGGTG+TGG | + | chr8_1:65430385-65430404 | Msa1207670:intron | 35.0% |
| !! | AAGTTGCAATTGGCTTTGTT+TGG | - | chr8_1:65430500-65430519 | None:intergenic | 35.0% |
| TGATGAATTGCAAGTTTGTG+AGG | - | chr8_1:65430788-65430807 | None:intergenic | 35.0% | |
| ATTCATCATGCAGCTACAAT+AGG | + | chr8_1:65430800-65430819 | Msa1207670:intron | 35.0% | |
| !! | GATCTCTTTTGTGTTTGGTG+AGG | - | chr8_1:65425758-65425777 | None:intergenic | 40.0% |
| ! | TCGTGGATCTCTTTTGTGTT+TGG | - | chr8_1:65425763-65425782 | None:intergenic | 40.0% |
| ! | TGTGTCATTGATGGTAGGTA+TGG | + | chr8_1:65425851-65425870 | Msa1207670:CDS | 40.0% |
| !! | GTTGATGATCAACACTACAG+AGG | + | chr8_1:65425878-65425897 | Msa1207670:CDS | 40.0% |
| CTAGGTTTGTAGCACATGAA+GGG | - | chr8_1:65425920-65425939 | None:intergenic | 40.0% | |
| ACTAGGTTTGTAGCACATGA+AGG | - | chr8_1:65425921-65425940 | None:intergenic | 40.0% | |
| ATTGGATCACAGCAAGAACT+AGG | - | chr8_1:65425978-65425997 | None:intergenic | 40.0% | |
| TTAAAGGTTGCAAGCAAACC+AGG | - | chr8_1:65426053-65426072 | None:intergenic | 40.0% | |
| TTTGCAAGTGGTAAGATCAG+TGG | - | chr8_1:65426123-65426142 | None:intergenic | 40.0% | |
| ATGCCTAATTGCTAAGAGTG+TGG | + | chr8_1:65426480-65426499 | Msa1207670:intron | 40.0% | |
| TTCCATCAATTTGGTCCATC+TGG | + | chr8_1:65426640-65426659 | Msa1207670:intron | 40.0% | |
| AACCAGATGGACCAAATTGA+TGG | - | chr8_1:65426645-65426664 | None:intergenic | 40.0% | |
| !! | CATCTTAGCCTTAAACCAGA+TGG | - | chr8_1:65426658-65426677 | None:intergenic | 40.0% |
| TCTATTGTCAGCTTCAACTG+CGG | - | chr8_1:65426961-65426980 | None:intergenic | 40.0% | |
| ! | TCCAATTTTCCTCTACACAG+TGG | + | chr8_1:65428143-65428162 | Msa1207670:intron | 40.0% |
| ! | AATTTTCCTCTACACAGTGG+CGG | + | chr8_1:65428146-65428165 | Msa1207670:intron | 40.0% |
| !! | ACCGGCTTTTTCTTTTTGAG+AGG | - | chr8_1:65428308-65428327 | None:intergenic | 40.0% |
| AAATATGTGTTGCACCTGCT+TGG | - | chr8_1:65429373-65429392 | None:intergenic | 40.0% | |
| ! | AGGTGCAACACATATTTTCC+AGG | + | chr8_1:65429376-65429395 | Msa1207670:intron | 40.0% |
| ! | TGCAACACATATTTTCCAGG+TGG | + | chr8_1:65429379-65429398 | Msa1207670:intron | 40.0% |
| AATGTTGCGATACACATTGG+CGG | - | chr8_1:65429479-65429498 | None:intergenic | 40.0% | |
| ACGAATGTTGCGATACACAT+TGG | - | chr8_1:65429482-65429501 | None:intergenic | 40.0% | |
| GCCATAATTCATCTTTCCCA+TGG | - | chr8_1:65429645-65429664 | None:intergenic | 40.0% | |
| CAGTAAGCATCATTGATCAC+AGG | - | chr8_1:65429814-65429833 | None:intergenic | 40.0% | |
| CAAAGGGAAAGAAAATGGCA+AGG | - | chr8_1:65429874-65429893 | None:intergenic | 40.0% | |
| CTGGACAAAGGGAAAGAAAA+TGG | - | chr8_1:65429879-65429898 | None:intergenic | 40.0% | |
| TGAATGGGGAATCACAGTTT+CGG | + | chr8_1:65429952-65429971 | Msa1207670:intron | 40.0% | |
| GAATCACAGTTTCGGAATCA+CGG | + | chr8_1:65429960-65429979 | Msa1207670:intron | 40.0% | |
| !! | GATTCTGAGATGCAATGAAG+AGG | + | chr8_1:65430010-65430029 | Msa1207670:intron | 40.0% |
| ! | CCTAATTGCTTGTTGAAGAG+AGG | - | chr8_1:65430255-65430274 | None:intergenic | 40.0% |
| CCTCTCTTCAACAAGCAATT+AGG | + | chr8_1:65430252-65430271 | Msa1207670:intron | 40.0% | |
| TTAGGAAACAAGTGAAGGTG+TGG | + | chr8_1:65430270-65430289 | Msa1207670:intron | 40.0% | |
| ! | TAGGAAACAAGTGAAGGTGT+GGG | + | chr8_1:65430271-65430290 | Msa1207670:intron | 40.0% |
| CCAGTTGAACAAGTTGCAAT+TGG | - | chr8_1:65430510-65430529 | None:intergenic | 40.0% | |
| ! | CCAATTGCAACTTGTTCAAC+TGG | + | chr8_1:65430507-65430526 | Msa1207670:intron | 40.0% |
| ! | AACTCGGTGGCATTTAACAT+GGG | - | chr8_1:65430584-65430603 | None:intergenic | 40.0% |
| GCTACAATAGGTGGTGATAA+AGG | + | chr8_1:65430812-65430831 | Msa1207670:intron | 40.0% | |
| !! | CGGCGTTTGACTTGACAATA+AGG | + | chr8_1:65425665-65425684 | Msa1207670:five_prime_UTR | 45.0% |
| GGTAATCAGCACATGGAACT+AGG | - | chr8_1:65425938-65425957 | None:intergenic | 45.0% | |
| ACAGCAAGAACTAGGTGGTT+TGG | - | chr8_1:65425970-65425989 | None:intergenic | 45.0% | |
| TGTAACCTCTTCAATGCTCC+TGG | + | chr8_1:65426032-65426051 | Msa1207670:CDS | 45.0% | |
| CCACCACACTCTTAGCAATT+AGG | - | chr8_1:65426486-65426505 | None:intergenic | 45.0% | |
| ! | CCTAATTGCTAAGAGTGTGG+TGG | + | chr8_1:65426483-65426502 | Msa1207670:intron | 45.0% |
| AAGAAGATTCTTACCCGGTG+GGG | - | chr8_1:65426875-65426894 | None:intergenic | 45.0% | |
| GAAGAAGATTCTTACCCGGT+GGG | - | chr8_1:65426876-65426895 | None:intergenic | 45.0% | |
| TGAAGAAGATTCTTACCCGG+TGG | - | chr8_1:65426877-65426896 | None:intergenic | 45.0% | |
| TTGAGAGGGAACAGTAGTTG+AGG | + | chr8_1:65427338-65427357 | Msa1207670:intron | 45.0% | |
| TGAGAGGGAACAGTAGTTGA+GGG | + | chr8_1:65427339-65427358 | Msa1207670:intron | 45.0% | |
| AGCCTGTAAACTTTAGACGC+TGG | + | chr8_1:65427499-65427518 | Msa1207670:intron | 45.0% | |
| GCCTGTAAACTTTAGACGCT+GGG | + | chr8_1:65427500-65427519 | Msa1207670:intron | 45.0% | |
| !! | TTAAACCAGGTTGGTTGGAG+CGG | - | chr8_1:65427940-65427959 | None:intergenic | 45.0% |
| GTTTGCATGTGTATCGTCAG+TGG | + | chr8_1:65427997-65428016 | Msa1207670:intron | 45.0% | |
| GCCACTGTGTAGAGGAAAAT+TGG | - | chr8_1:65428147-65428166 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTACACAGTGGC+GGG | + | chr8_1:65428147-65428166 | Msa1207670:intron | 45.0% |
| AGCATATGCAAGTGCAACAC+TGG | + | chr8_1:65429326-65429345 | Msa1207670:intron | 45.0% | |
| ! | CAACACTGGCTGTTGTCTAT+CGG | + | chr8_1:65429340-65429359 | Msa1207670:intron | 45.0% |
| CGTGGCATTTAACATGGGAA+TGG | + | chr8_1:65429605-65429624 | Msa1207670:intron | 45.0% | |
| GAAAATGGCAGCTCGTTGAA+GGG | - | chr8_1:65429847-65429866 | None:intergenic | 45.0% | |
| AGAAAATGGCAGCTCGTTGA+AGG | - | chr8_1:65429848-65429867 | None:intergenic | 45.0% | |
| TTCTCTTCATGTTGCTCGTG+TGG | + | chr8_1:65430318-65430337 | Msa1207670:intron | 45.0% | |
| GCTCGTGTGGTTAAAGAACA+AGG | + | chr8_1:65430331-65430350 | Msa1207670:intron | 45.0% | |
| CGTGTGGTTAAAGAACAAGG+AGG | + | chr8_1:65430334-65430353 | Msa1207670:intron | 45.0% | |
| ! | GAGTCTGTGGAGAAAAGTAC+TGG | + | chr8_1:65430372-65430391 | Msa1207670:intron | 45.0% |
| GTCATAATCTGCCTTTCCCA+TGG | + | chr8_1:65430539-65430558 | Msa1207670:intron | 45.0% | |
| ATAATCTGCCTTTCCCATGG+TGG | + | chr8_1:65430542-65430561 | Msa1207670:intron | 45.0% | |
| TAATCTGCCTTTCCCATGGT+GGG | + | chr8_1:65430543-65430562 | Msa1207670:intron | 45.0% | |
| GGTGGCATTTAACATGGGAA+AGG | - | chr8_1:65430579-65430598 | None:intergenic | 45.0% | |
| ! | GAACTCGGTGGCATTTAACA+TGG | - | chr8_1:65430585-65430604 | None:intergenic | 45.0% |
| CATCATGCAGCTACAATAGG+TGG | + | chr8_1:65430803-65430822 | Msa1207670:intron | 45.0% | |
| !!! | TTATTTTTATTTAAAATTGA+GGG | + | chr8_1:65429089-65429108 | Msa1207670:intron | 5.0% |
| !!! | TATTTTTATTAATATATCAA+GGG | - | chr8_1:65429667-65429686 | None:intergenic | 5.0% |
| !!! | ATATTTTTATTAATATATCA+AGG | - | chr8_1:65429668-65429687 | None:intergenic | 5.0% |
| !! | ATATTAATAAAAATATTCAA+TGG | + | chr8_1:65429672-65429691 | Msa1207670:intron | 5.0% |
| !!! | ATGATATTTTATTTTAATAA+TGG | + | chr8_1:65429780-65429799 | Msa1207670:intron | 5.0% |
| !! | ATATATCATATATAAATATA+CGG | - | chr8_1:65431132-65431151 | None:intergenic | 5.0% |
| GGATCACAGCAAGAACTAGG+TGG | - | chr8_1:65425975-65425994 | None:intergenic | 50.0% | |
| !! | GCAAACCAGGAGCATTGAAG+AGG | - | chr8_1:65426040-65426059 | None:intergenic | 50.0% |
| CTTGCGTTGAGTCGTAACTG+TGG | + | chr8_1:65426092-65426111 | Msa1207670:CDS | 50.0% | |
| ! | GCCCAGCGTCTAAAGTTTAC+AGG | - | chr8_1:65427504-65427523 | None:intergenic | 50.0% |
| ! | ATGAGTGCCCGTCTTTTCAC+TGG | - | chr8_1:65428664-65428683 | None:intergenic | 50.0% |
| !! | CTATCGGTTTGTGTCCAAGC+AGG | + | chr8_1:65429356-65429375 | Msa1207670:intron | 50.0% |
| TGGTGATTCCTTTCCCACCA+TGG | + | chr8_1:65429625-65429644 | Msa1207670:intron | 50.0% | |
| GGTGATTCCTTTCCCACCAT+GGG | + | chr8_1:65429626-65429645 | Msa1207670:intron | 50.0% | |
| ! | CATCTTTCCCATGGTGGGAA+AGG | - | chr8_1:65429636-65429655 | None:intergenic | 50.0% |
| CACAGTTTCGGAATCACGGA+TGG | + | chr8_1:65429964-65429983 | Msa1207670:intron | 50.0% | |
| AAGGAGGAGAGAGAGAAGAG+TGG | + | chr8_1:65430350-65430369 | Msa1207670:intron | 50.0% | |
| AGAGAGAAGAGTGGAGTCTG+TGG | + | chr8_1:65430359-65430378 | Msa1207670:intron | 50.0% | |
| ATCCTTTCCCACCATGGGAA+AGG | - | chr8_1:65430553-65430572 | None:intergenic | 50.0% | |
| GGCTAATCCTTTCCCACCAT+GGG | - | chr8_1:65430558-65430577 | None:intergenic | 50.0% | |
| AGGCTAATCCTTTCCCACCA+TGG | - | chr8_1:65430559-65430578 | None:intergenic | 50.0% | |
| TCAGCTCCAGCTCCTACTTC+CGG | + | chr8_1:65426844-65426863 | Msa1207670:CDS | 55.0% | |
| TGTATCGTCAGTGGCGTTGC+AGG | + | chr8_1:65428006-65428025 | Msa1207670:intron | 55.0% | |
| TCAGTGGCGTTGCAGGATCT+GGG | + | chr8_1:65428013-65428032 | Msa1207670:intron | 55.0% | |
| ATAGACCCGCCACTGTGTAG+AGG | - | chr8_1:65428155-65428174 | None:intergenic | 55.0% | |
| CTTGTTCAACTGGCAGCTGC+AGG | + | chr8_1:65430517-65430536 | Msa1207670:intron | 55.0% | |
| ! | TGCCTTTCCCATGGTGGGAA+AGG | + | chr8_1:65430548-65430567 | Msa1207670:intron | 55.0% |
| GGTGGTGATAAAGGAGCTGC+AGG | + | chr8_1:65430821-65430840 | Msa1207670:CDS | 55.0% | |
| GCAGGCAGAGTCTCATTCAC+TGG | + | chr8_1:65430839-65430858 | Msa1207670:CDS | 55.0% | |
| TTGGACCGCTCCAACCAACC+TGG | + | chr8_1:65427932-65427951 | Msa1207670:intron | 60.0% | |
| GTCAGTGGCGTTGCAGGATC+TGG | + | chr8_1:65428012-65428031 | Msa1207670:intron | 60.0% | |
| CAGTGGCGTTGCAGGATCTG+GGG | + | chr8_1:65428014-65428033 | Msa1207670:intron | 60.0% | |
| GGATGCAAGCTGCATCCCCT+GGG | + | chr8_1:65429441-65429460 | Msa1207670:intron | 60.0% | |
| ACACATTGGCGGAGCCAGGT+TGG | - | chr8_1:65429468-65429487 | None:intergenic | 60.0% | |
| CGATACACATTGGCGGAGCC+AGG | - | chr8_1:65429472-65429491 | None:intergenic | 60.0% | |
| GCTCCAGCTCCTACTTCCGG+CGG | + | chr8_1:65426847-65426866 | Msa1207670:CDS | 65.0% | |
| CTCCAGCTCCTACTTCCGGC+GGG | + | chr8_1:65426848-65426867 | Msa1207670:CDS | 65.0% | |
| GGGATGCAAGCTGCATCCCC+TGG | + | chr8_1:65429440-65429459 | Msa1207670:intron | 65.0% | |
| TGCATCCCCTGGGTCCAACC+TGG | + | chr8_1:65429451-65429470 | Msa1207670:intron | 65.0% | |
| GACCCGCCGGAAGTAGGAGC+TGG | - | chr8_1:65426853-65426872 | None:intergenic | 70.0% | |
| TACTTCCGGCGGGTCCCCAC+CGG | + | chr8_1:65426858-65426877 | Msa1207670:CDS | 70.0% | |
| ! | CGGAGCCAGGTTGGACCCAG+GGG | - | chr8_1:65429459-65429478 | None:intergenic | 70.0% |
| ! | GCGGAGCCAGGTTGGACCCA+GGG | - | chr8_1:65429460-65429479 | None:intergenic | 70.0% |
| GGTGGGGACCCGCCGGAAGT+AGG | - | chr8_1:65426859-65426878 | None:intergenic | 75.0% | |
| ACTTCCGGCGGGTCCCCACC+GGG | + | chr8_1:65426859-65426878 | Msa1207670:CDS | 75.0% | |
| CTTACCCGGTGGGGACCCGC+CGG | - | chr8_1:65426866-65426885 | None:intergenic | 75.0% | |
| ! | GGCGGAGCCAGGTTGGACCC+AGG | - | chr8_1:65429461-65429480 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 65425663 | 65431189 | 65425663 | ID=Msa1207670;Name=Msa1207670 |
| chr8_1 | mRNA | 65425663 | 65431189 | 65425663 | ID=Msa1207670-mRNA-1;Parent=Msa1207670;Name=Msa1207670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=162|1|1|1|0.5|0.33|3|285|151 |
| chr8_1 | exon | 65425663 | 65426146 | 65425663 | ID=Msa1207670-mRNA-1:exon:21438;Parent=Msa1207670-mRNA-1 |
| chr8_1 | exon | 65426839 | 65426880 | 65426839 | ID=Msa1207670-mRNA-1:exon:21439;Parent=Msa1207670-mRNA-1 |
| chr8_1 | exon | 65430813 | 65431189 | 65430813 | ID=Msa1207670-mRNA-1:exon:21440;Parent=Msa1207670-mRNA-1 |
| chr8_1 | five_prime_UTR | 65425663 | 65425824 | 65425663 | ID=Msa1207670-mRNA-1:five_prime_utr;Parent=Msa1207670-mRNA-1 |
| chr8_1 | CDS | 65425825 | 65426146 | 65425825 | ID=Msa1207670-mRNA-1:cds;Parent=Msa1207670-mRNA-1 |
| chr8_1 | CDS | 65426839 | 65426880 | 65426839 | ID=Msa1207670-mRNA-1:cds;Parent=Msa1207670-mRNA-1 |
| chr8_1 | CDS | 65430813 | 65430904 | 65430813 | ID=Msa1207670-mRNA-1:cds;Parent=Msa1207670-mRNA-1 |
| chr8_1 | three_prime_UTR | 65430905 | 65431189 | 65430905 | ID=Msa1207670-mRNA-1:three_prime_utr;Parent=Msa1207670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
