Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458220 | XP_013460286.1 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458220 | sp|P19251|ASNS1_PEA | 95.222 | 586 | 28 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458220 | A0A072UXM4 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1224 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0458220 | -0.803389 | 3.569146e-49 | -8.615850e-47 |
| Msa0011920 | Msa0458220 | -0.844153 | 9.019918e-59 | -8.615850e-47 |
| Msa0030050 | Msa0458220 | 0.845085 | 5.059718e-59 | -8.615850e-47 |
| Msa0037180 | Msa0458220 | 0.858178 | 9.847823e-63 | -8.615850e-47 |
| Msa0037280 | Msa0458220 | 0.829852 | 4.082099e-55 | -8.615850e-47 |
| Msa0037650 | Msa0458220 | -0.841987 | 3.404119e-58 | -8.615850e-47 |
| Msa0037720 | Msa0458220 | 0.860360 | 2.180494e-63 | -8.615850e-47 |
| Msa0039890 | Msa0458220 | 0.811488 | 6.826491e-51 | -8.615850e-47 |
| Msa0045310 | Msa0458220 | 0.815248 | 1.019145e-51 | -8.615850e-47 |
| Msa0052780 | Msa0458220 | 0.832191 | 1.087976e-55 | -8.615850e-47 |
| Msa0074860 | Msa0458220 | -0.814909 | 1.211515e-51 | -8.615850e-47 |
| Msa0075990 | Msa0458220 | -0.813455 | 2.537010e-51 | -8.615850e-47 |
| Msa0076640 | Msa0458220 | 0.830299 | 3.175142e-55 | -8.615850e-47 |
| Msa0081700 | Msa0458220 | -0.822215 | 2.668686e-53 | -8.615850e-47 |
| Msa0083240 | Msa0458220 | 0.874960 | 4.488039e-68 | -8.615850e-47 |
| Msa0087550 | Msa0458220 | 0.847312 | 1.252692e-59 | -8.615850e-47 |
| Msa0092220 | Msa0458220 | 0.861454 | 1.014176e-63 | -8.615850e-47 |
| Msa0093740 | Msa0458220 | 0.953185 | 4.784185e-111 | -8.615850e-47 |
| Msa0097570 | Msa0458220 | 0.827420 | 1.580226e-54 | -8.615850e-47 |
| Msa0099430 | Msa0458220 | -0.801188 | 1.013135e-48 | -8.615850e-47 |
| Msa0103830 | Msa0458220 | 0.807101 | 5.957511e-50 | -8.615850e-47 |
| Msa0105480 | Msa0458220 | -0.802893 | 4.518479e-49 | -8.615850e-47 |
| Msa0127220 | Msa0458220 | -0.806503 | 7.969734e-50 | -8.615850e-47 |
| Msa0127910 | Msa0458220 | -0.832138 | 1.121537e-55 | -8.615850e-47 |
| Msa0129640 | Msa0458220 | 0.855466 | 6.193061e-62 | -8.615850e-47 |
| Msa0134270 | Msa0458220 | 0.837064 | 6.477386e-57 | -8.615850e-47 |
| Msa0143630 | Msa0458220 | 0.806624 | 7.516207e-50 | -8.615850e-47 |
| Msa0145430 | Msa0458220 | 0.839189 | 1.838655e-57 | -8.615850e-47 |
| Msa0150330 | Msa0458220 | 0.819229 | 1.295951e-52 | -8.615850e-47 |
| Msa0159240 | Msa0458220 | -0.808471 | 3.047949e-50 | -8.615850e-47 |
| Msa0174060 | Msa0458220 | -0.832729 | 8.006164e-56 | -8.615850e-47 |
| Msa0177320 | Msa0458220 | 0.854604 | 1.102208e-61 | -8.615850e-47 |
| Msa0178000 | Msa0458220 | 0.819682 | 1.021485e-52 | -8.615850e-47 |
| Msa0180820 | Msa0458220 | 0.810840 | 9.437447e-51 | -8.615850e-47 |
| Msa0216150 | Msa0458220 | -0.830941 | 2.211040e-55 | -8.615850e-47 |
| Msa0223590 | Msa0458220 | 0.814494 | 1.497418e-51 | -8.615850e-47 |
| Msa0224210 | Msa0458220 | 0.811823 | 5.774759e-51 | -8.615850e-47 |
| Msa0225070 | Msa0458220 | -0.819587 | 1.074056e-52 | -8.615850e-47 |
| Msa0236690 | Msa0458220 | -0.802369 | 5.795591e-49 | -8.615850e-47 |
| Msa0238140 | Msa0458220 | 0.806355 | 8.564616e-50 | -8.615850e-47 |
| Msa0369990 | Msa0458220 | 0.801408 | 9.134031e-49 | -8.615850e-47 |
| Msa0374290 | Msa0458220 | 0.802914 | 4.475359e-49 | -8.615850e-47 |
| Msa0381470 | Msa0458220 | 0.853635 | 2.097187e-61 | -8.615850e-47 |
| Msa0386890 | Msa0458220 | 0.842777 | 2.101650e-58 | -8.615850e-47 |
| Msa0389080 | Msa0458220 | -0.801010 | 1.101510e-48 | -8.615850e-47 |
| Msa0390590 | Msa0458220 | -0.831275 | 1.830631e-55 | -8.615850e-47 |
| Msa0390790 | Msa0458220 | 0.810737 | 9.932104e-51 | -8.615850e-47 |
| Msa0399810 | Msa0458220 | 0.802030 | 6.807509e-49 | -8.615850e-47 |
| Msa0399820 | Msa0458220 | 0.812030 | 5.204334e-51 | -8.615850e-47 |
| Msa0402800 | Msa0458220 | 0.814146 | 1.787300e-51 | -8.615850e-47 |
| Msa0403740 | Msa0458220 | -0.811831 | 5.750071e-51 | -8.615850e-47 |
| Msa0413130 | Msa0458220 | 0.943123 | 2.119644e-102 | -8.615850e-47 |
| Msa0427560 | Msa0458220 | 0.804161 | 2.467543e-49 | -8.615850e-47 |
| Msa0456450 | Msa0458220 | -0.811156 | 8.060252e-51 | -8.615850e-47 |
| Msa0458220 | Msa0470920 | 0.809874 | 1.524999e-50 | -8.615850e-47 |
| Msa0458220 | Msa0474570 | 0.813813 | 2.116346e-51 | -8.615850e-47 |
| Msa0458220 | Msa0476070 | 0.829026 | 6.480697e-55 | -8.615850e-47 |
| Msa0458220 | Msa0480530 | 0.802158 | 6.407797e-49 | -8.615850e-47 |
| Msa0458220 | Msa0481100 | 0.823458 | 1.370154e-53 | -8.615850e-47 |
| Msa0458220 | Msa0481310 | 0.805447 | 1.328966e-49 | -8.615850e-47 |
| Msa0458220 | Msa0504700 | 0.971577 | 2.202565e-133 | -8.615850e-47 |
| Msa0458220 | Msa0519910 | 0.858827 | 6.303246e-63 | -8.615850e-47 |
| Msa0458220 | Msa0524260 | 0.821223 | 4.525868e-53 | -8.615850e-47 |
| Msa0458220 | Msa0524370 | 0.822405 | 2.411304e-53 | -8.615850e-47 |
| Msa0458220 | Msa0528930 | 0.808482 | 3.030525e-50 | -8.615850e-47 |
| Msa0458220 | Msa0538050 | -0.824802 | 6.624310e-54 | -8.615850e-47 |
| Msa0458220 | Msa0560280 | 0.828042 | 1.119857e-54 | -8.615850e-47 |
| Msa0458220 | Msa0563230 | -0.803215 | 3.877615e-49 | -8.615850e-47 |
| Msa0458220 | Msa0563440 | 0.824588 | 7.440610e-54 | -8.615850e-47 |
| Msa0458220 | Msa0565180 | 0.809345 | 1.980929e-50 | -8.615850e-47 |
| Msa0458220 | Msa0568300 | -0.804574 | 2.023558e-49 | -8.615850e-47 |
| Msa0458220 | Msa0572730 | -0.832200 | 1.082794e-55 | -8.615850e-47 |
| Msa0458220 | Msa0580850 | 0.802083 | 6.636683e-49 | -8.615850e-47 |
| Msa0458220 | Msa0588110 | -0.802454 | 5.568119e-49 | -8.615850e-47 |
| Msa0458220 | Msa0593600 | 0.803015 | 4.265026e-49 | -8.615850e-47 |
| Msa0458220 | Msa0595530 | 0.801654 | 8.131672e-49 | -8.615850e-47 |
| Msa0458220 | Msa0600350 | 0.814540 | 1.462884e-51 | -8.615850e-47 |
| Msa0458220 | Msa0614290 | 0.837000 | 6.729832e-57 | -8.615850e-47 |
| Msa0458220 | Msa0614480 | 0.814778 | 1.295307e-51 | -8.615850e-47 |
| Msa0458220 | Msa0616580 | 0.812909 | 3.344385e-51 | -8.615850e-47 |
| Msa0458220 | Msa0617470 | -0.811975 | 5.349128e-51 | -8.615850e-47 |
| Msa0458220 | Msa0620340 | 0.804788 | 1.825647e-49 | -8.615850e-47 |
| Msa0458220 | Msa0621670 | -0.836533 | 8.848660e-57 | -8.615850e-47 |
| Msa0458220 | Msa0626920 | 0.813264 | 2.794708e-51 | -8.615850e-47 |
| Msa0458220 | Msa0638810 | 0.818885 | 1.551962e-52 | -8.615850e-47 |
| Msa0458220 | Msa0638820 | 0.819143 | 1.355885e-52 | -8.615850e-47 |
| Msa0458220 | Msa0639110 | 0.812319 | 4.500596e-51 | -8.615850e-47 |
| Msa0458220 | Msa0639530 | -0.824587 | 7.445694e-54 | -8.615850e-47 |
| Msa0458220 | Msa0657340 | 0.809405 | 1.923497e-50 | -8.615850e-47 |
| Msa0458220 | Msa0660650 | 0.801361 | 9.338756e-49 | -8.615850e-47 |
| Msa0458220 | Msa0672950 | 0.808046 | 3.754078e-50 | -8.615850e-47 |
| Msa0458220 | Msa0672980 | 0.829194 | 5.898294e-55 | -8.615850e-47 |
| Msa0458220 | Msa0686810 | 0.801749 | 7.773407e-49 | -8.615850e-47 |
| Msa0458220 | Msa0695140 | 0.808550 | 2.931344e-50 | -8.615850e-47 |
| Msa0458220 | Msa0697510 | 0.834609 | 2.715502e-56 | -8.615850e-47 |
| Msa0458220 | Msa0697520 | 0.825965 | 3.515204e-54 | -8.615850e-47 |
| Msa0458220 | Msa0700250 | -0.804619 | 1.979966e-49 | -8.615850e-47 |
| Msa0458220 | Msa0701430 | 0.816046 | 6.767049e-52 | -8.615850e-47 |
| Msa0458220 | Msa0744540 | 0.801711 | 7.916527e-49 | -8.615850e-47 |
| Msa0458220 | Msa0753270 | 0.803162 | 3.975605e-49 | -8.615850e-47 |
| Msa0458220 | Msa0754020 | -0.814254 | 1.692246e-51 | -8.615850e-47 |
| Msa0458220 | Msa0807100 | -0.816336 | 5.827933e-52 | -8.615850e-47 |
| Msa0458220 | Msa0807870 | -0.802228 | 6.196516e-49 | -8.615850e-47 |
| Msa0458220 | Msa0816630 | 0.827735 | 1.327674e-54 | -8.615850e-47 |
| Msa0458220 | Msa0826370 | 0.809597 | 1.749438e-50 | -8.615850e-47 |
| Msa0458220 | Msa0826380 | 0.829002 | 6.568257e-55 | -8.615850e-47 |
| Msa0458220 | Msa0826450 | 0.813995 | 1.930262e-51 | -8.615850e-47 |
| Msa0458220 | Msa0828350 | 0.801594 | 8.363796e-49 | -8.615850e-47 |
| Msa0458220 | Msa0832520 | 0.809667 | 1.689808e-50 | -8.615850e-47 |
| Msa0458220 | Msa0833030 | -0.806403 | 8.367796e-50 | -8.615850e-47 |
| Msa0458220 | Msa0863940 | 0.835440 | 1.676321e-56 | -8.615850e-47 |
| Msa0458220 | Msa0873880 | 0.813984 | 1.940785e-51 | -8.615850e-47 |
| Msa0458220 | Msa0873910 | 0.842802 | 2.070176e-58 | -8.615850e-47 |
| Msa0458220 | Msa0873940 | 0.806635 | 7.476134e-50 | -8.615850e-47 |
| Msa0458220 | Msa0906660 | 0.805800 | 1.120575e-49 | -8.615850e-47 |
| Msa0458220 | Msa0906680 | 0.827937 | 1.187444e-54 | -8.615850e-47 |
| Msa0458220 | Msa0909810 | 0.815823 | 7.586150e-52 | -8.615850e-47 |
| Msa0458220 | Msa0924690 | -0.845822 | 3.196045e-59 | -8.615850e-47 |
| Msa0458220 | Msa0931550 | -0.830282 | 3.205510e-55 | -8.615850e-47 |
| Msa0458220 | Msa0947550 | -0.803644 | 3.158943e-49 | -8.615850e-47 |
| Msa0458220 | Msa0963800 | -0.845277 | 4.489712e-59 | -8.615850e-47 |
| Msa0458220 | Msa0967900 | -0.810520 | 1.106693e-50 | -8.615850e-47 |
| Msa0458220 | Msa0969380 | 0.834012 | 3.832278e-56 | -8.615850e-47 |
| Msa0458220 | Msa0969590 | 0.824745 | 6.833887e-54 | -8.615850e-47 |
| Msa0458220 | Msa0969720 | 0.824779 | 6.708896e-54 | -8.615850e-47 |
| Msa0458220 | Msa0975950 | 0.814290 | 1.661158e-51 | -8.615850e-47 |
| Msa0458220 | Msa0975960 | 0.846823 | 1.705230e-59 | -8.615850e-47 |
| Msa0458220 | Msa1004300 | -0.815632 | 8.367795e-52 | -8.615850e-47 |
| Msa0458220 | Msa1028660 | 0.819641 | 1.043842e-52 | -8.615850e-47 |
| Msa0458220 | Msa1041250 | 0.820270 | 7.495692e-53 | -8.615850e-47 |
| Msa0458220 | Msa1052000 | 0.808322 | 3.278816e-50 | -8.615850e-47 |
| Msa0458220 | Msa1055520 | -0.801250 | 9.839761e-49 | -8.615850e-47 |
| Msa0458220 | Msa1071230 | 0.801432 | 9.031398e-49 | -8.615850e-47 |
| Msa0458220 | Msa1082080 | 0.801350 | 9.384782e-49 | -8.615850e-47 |
| Msa0458220 | Msa1088000 | -0.821068 | 4.914823e-53 | -8.615850e-47 |
| Msa0458220 | Msa1117770 | -0.808314 | 3.291005e-50 | -8.615850e-47 |
| Msa0458220 | Msa1121720 | -0.814940 | 1.192952e-51 | -8.615850e-47 |
| Msa0458220 | Msa1129120 | -0.802131 | 6.489512e-49 | -8.615850e-47 |
| Msa0458220 | Msa1157200 | 0.834923 | 2.263601e-56 | -8.615850e-47 |
| Msa0458220 | Msa1171510 | 0.940861 | 1.128211e-100 | -8.615850e-47 |
| Msa0458220 | Msa1173150 | 0.829138 | 6.088290e-55 | -8.615850e-47 |
| Msa0458220 | Msa1174340 | 0.816015 | 6.873939e-52 | -8.615850e-47 |
| Msa0458220 | Msa1181370 | -0.809796 | 1.585182e-50 | -8.615850e-47 |
| Msa0458220 | Msa1193910 | 0.817458 | 3.263872e-52 | -8.615850e-47 |
| Msa0458220 | Msa1196110 | 0.807419 | 5.102663e-50 | -8.615850e-47 |
| Msa0458220 | Msa1199870 | 0.822321 | 2.522130e-53 | -8.615850e-47 |
| Msa0458220 | Msa1202470 | 0.848165 | 7.292441e-60 | -8.615850e-47 |
| Msa0458220 | Msa1202710 | -0.810906 | 9.132345e-51 | -8.615850e-47 |
| Msa0458220 | Msa1205270 | -0.803197 | 3.910343e-49 | -8.615850e-47 |
| Msa0458220 | Msa1211600 | 0.804323 | 2.282326e-49 | -8.615850e-47 |
| Msa0458220 | Msa1217950 | 0.820830 | 5.573907e-53 | -8.615850e-47 |
| Msa0458220 | Msa1219790 | 0.800480 | 1.413253e-48 | -8.615850e-47 |
| Msa0458220 | Msa1228600 | -0.800276 | 1.555179e-48 | -8.615850e-47 |
| Msa0458220 | Msa1236190 | -0.803955 | 2.723435e-49 | -8.615850e-47 |
| Msa0458220 | Msa1249600 | 0.837871 | 4.023882e-57 | -8.615850e-47 |
| Msa0458220 | Msa1254910 | 0.823675 | 1.219190e-53 | -8.615850e-47 |
| Msa0458220 | Msa1276400 | 0.801815 | 7.535068e-49 | -8.615850e-47 |
| Msa0458220 | Msa1302340 | 0.803130 | 4.037853e-49 | -8.615850e-47 |
| Msa0458220 | Msa1304790 | 0.831003 | 2.135250e-55 | -8.615850e-47 |
| Msa0458220 | Msa1322180 | 0.805092 | 1.576990e-49 | -8.615850e-47 |
| Msa0458220 | Msa1326180 | 0.845082 | 5.068325e-59 | -8.615850e-47 |
| Msa0458220 | Msa1326780 | -0.813395 | 2.615850e-51 | -8.615850e-47 |
| Msa0458220 | Msa1330400 | 0.807392 | 5.168472e-50 | -8.615850e-47 |
| Msa0458220 | Msa1339870 | 0.800541 | 1.372903e-48 | -8.615850e-47 |
| Msa0458220 | Msa1342360 | -0.811426 | 7.044057e-51 | -8.615850e-47 |
| Msa0458220 | Msa1344930 | 0.803261 | 3.793887e-49 | -8.615850e-47 |
| Msa0458220 | Msa1348860 | -0.807975 | 3.887615e-50 | -8.615850e-47 |
| Msa0458220 | Msa1356100 | -0.814688 | 1.356647e-51 | -8.615850e-47 |
| Msa0458220 | Msa1357990 | 0.812371 | 4.385572e-51 | -8.615850e-47 |
| Msa0458220 | Msa1361040 | 0.839607 | 1.432015e-57 | -8.615850e-47 |
| Msa0458220 | Msa1364970 | 0.809957 | 1.463825e-50 | -8.615850e-47 |
| Msa0458220 | Msa1366480 | 0.810895 | 9.182298e-51 | -8.615850e-47 |
| Msa0458220 | Msa1367460 | 0.812382 | 4.360608e-51 | -8.615850e-47 |
| Msa0458220 | Msa1368400 | 0.842687 | 2.220537e-58 | -8.615850e-47 |
| Msa0458220 | Msa1377980 | -0.836208 | 1.070415e-56 | -8.615850e-47 |
| Msa0458220 | Msa1380180 | -0.812811 | 3.513778e-51 | -8.615850e-47 |
| Msa0458220 | Msa1380790 | 0.809190 | 2.138818e-50 | -8.615850e-47 |
| Msa0458220 | Msa1383190 | 0.809019 | 2.326340e-50 | -8.615850e-47 |
| Msa0458220 | Msa1384410 | -0.827833 | 1.257248e-54 | -8.615850e-47 |
| Msa0458220 | Msa1388720 | -0.802964 | 4.369783e-49 | -8.615850e-47 |
| Msa0458220 | Msa1398450 | -0.834683 | 2.601380e-56 | -8.615850e-47 |
| Msa0458220 | Msa1401550 | 0.823805 | 1.136785e-53 | -8.615850e-47 |
| Msa0458220 | Msa1402300 | 0.816889 | 4.382536e-52 | -8.615850e-47 |
| Msa0458220 | Msa1408280 | -0.833312 | 5.732520e-56 | -8.615850e-47 |
| Msa0458220 | Msa1408860 | -0.815590 | 8.552689e-52 | -8.615850e-47 |
| Msa0458220 | Msa1411370 | 0.822412 | 2.402311e-53 | -8.615850e-47 |
| Msa0458220 | Msa1412410 | 0.849927 | 2.360967e-60 | -8.615850e-47 |
| Msa0458220 | Msa1413150 | 0.816924 | 4.303047e-52 | -8.615850e-47 |
| Msa0458220 | Msa1414780 | -0.813298 | 2.747408e-51 | -8.615850e-47 |
| Msa0458220 | Msa1417600 | 0.807454 | 5.015881e-50 | -8.615850e-47 |
| Msa0458220 | Msa1427860 | 0.852903 | 3.400975e-61 | -8.615850e-47 |
| Msa0458220 | Msa1429470 | 0.819519 | 1.113083e-52 | -8.615850e-47 |
| Msa0458220 | Msa1435550 | 0.808227 | 3.435159e-50 | -8.615850e-47 |
| Msa0458220 | Msa1439860 | 0.825269 | 5.139786e-54 | -8.615850e-47 |
| Msa0458220 | Msa1453430 | 0.818420 | 1.978336e-52 | -8.615850e-47 |
| Msa0458220 | Msa1456180 | -0.831788 | 1.368727e-55 | -8.615850e-47 |
| Msa0458220 | Msa1459920 | 0.800705 | 1.271146e-48 | -8.615850e-47 |
| Msa0458220 | Msa1462640 | 0.833304 | 5.759443e-56 | -8.615850e-47 |
| Msa0238950 | Msa0458220 | 0.801858 | 7.383698e-49 | -8.615850e-47 |
| Msa0242790 | Msa0458220 | 0.811832 | 5.748591e-51 | -8.615850e-47 |
| Msa0247030 | Msa0458220 | 0.820492 | 6.664510e-53 | -8.615850e-47 |
| Msa0264890 | Msa0458220 | 0.817315 | 3.514230e-52 | -8.615850e-47 |
| Msa0285420 | Msa0458220 | 0.852382 | 4.787591e-61 | -8.615850e-47 |
| Msa0294200 | Msa0458220 | 0.801746 | 7.783788e-49 | -8.615850e-47 |
| Msa0303900 | Msa0458220 | 0.802675 | 5.014210e-49 | -8.615850e-47 |
| Msa0324220 | Msa0458220 | 0.844100 | 9.317260e-59 | -8.615850e-47 |
| Msa0332360 | Msa0458220 | 0.812765 | 3.595280e-51 | -8.615850e-47 |
| Msa0334450 | Msa0458220 | -0.816189 | 6.285942e-52 | -8.615850e-47 |
| Msa0340270 | Msa0458220 | 0.832355 | 9.908747e-56 | -8.615850e-47 |
| Msa0364030 | Msa0458220 | -0.810408 | 1.169960e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458220 | MtrunA17_Chr3g0105311 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1224 |
| Msa0458220 | MtrunA17_Chr5g0430381 | 86.177 | 586 | 79 | 2 | 1 | 586 | 1 | 584 | 0.0 | 1059 |
| Msa0458220 | MtrunA17_Chr3g0123991 | 75.714 | 560 | 135 | 1 | 1 | 560 | 1 | 559 | 0.0 | 916 |
| Msa0458220 | MtrunA17_Chr5g0429171 | 56.481 | 108 | 40 | 2 | 479 | 586 | 5 | 105 | 4.40e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458220 | AT3G47340.1 | 82.112 | 587 | 101 | 3 | 1 | 586 | 1 | 584 | 0.0 | 1024 |
| Msa0458220 | AT5G10240.1 | 79.099 | 555 | 115 | 1 | 1 | 555 | 1 | 554 | 0.0 | 948 |
| Msa0458220 | AT5G65010.1 | 78.584 | 551 | 117 | 1 | 1 | 551 | 1 | 550 | 0.0 | 940 |
| Msa0458220 | AT5G65010.2 | 78.623 | 552 | 116 | 2 | 1 | 551 | 1 | 551 | 0.0 | 937 |
| Msa0458220 | AT5G10240.2 | 78.559 | 555 | 117 | 2 | 1 | 555 | 1 | 553 | 0.0 | 937 |
| Msa0458220 | AT3G47340.2 | 84.676 | 509 | 77 | 1 | 1 | 509 | 1 | 508 | 0.0 | 928 |
| Msa0458220 | AT3G47340.3 | 84.450 | 418 | 64 | 1 | 1 | 418 | 1 | 417 | 0.0 | 766 |
| Msa0458220 | AT3G47340.4 | 83.828 | 303 | 48 | 1 | 116 | 418 | 1 | 302 | 0.0 | 550 |
Find 146 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGCATATGTTGATTTAT+TGG | 0.113242 | 3_3:+53576358 | None:intergenic |
| AACACTATGATATTGTAATT+TGG | 0.201699 | 3_3:-53574921 | Msa0458220:three_prime_UTR |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3_3:+53576546 | None:intergenic |
| AATAATATTCTGGCTTTATT+AGG | 0.218404 | 3_3:+53575102 | None:intergenic |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3_3:-53577960 | Msa0458220:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3_3:-53576608 | Msa0458220:CDS |
| TGAATTTCAGTTTACAATTC+AGG | 0.237255 | 3_3:-53577327 | Msa0458220:intron |
| CAAAGAGAATAGTTTCTATA+AGG | 0.244961 | 3_3:+53579764 | None:intergenic |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3_3:+53575754 | None:intergenic |
| CACTTCCTTGTACATTGGTT+GGG | 0.257852 | 3_3:-53578093 | Msa0458220:CDS |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3_3:+53575201 | None:intergenic |
| CATATGATGTTACTACAATT+AGG | 0.278268 | 3_3:-53576676 | Msa0458220:CDS |
| CAAATGCTATGTTATGTATA+AGG | 0.280088 | 3_3:-53575017 | Msa0458220:three_prime_UTR |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 3_3:-53578574 | Msa0458220:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3_3:-53578611 | Msa0458220:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3_3:+53576516 | None:intergenic |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3_3:-53575303 | Msa0458220:CDS |
| TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3_3:-53575280 | Msa0458220:CDS |
| ATTGTTTCCTGAGGTCTTCA+TGG | 0.316641 | 3_3:+53578387 | None:intergenic |
| AGATTAGAGATTTCCATCTT+TGG | 0.319043 | 3_3:+53575172 | None:intergenic |
| TCAGCAAGGCTAACGGTTCC+TGG | 0.326698 | 3_3:-53575358 | Msa0458220:CDS |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3_3:+53576536 | None:intergenic |
| TGGTTGGATCGATGGTATTA+AGG | 0.333548 | 3_3:-53575945 | Msa0458220:CDS |
| TTATGTTAGTATGAGGAGTA+TGG | 0.338204 | 3_3:-53578212 | Msa0458220:intron |
| GATTACAGGCTGTCATAAAA+AGG | 0.342496 | 3_3:-53577684 | Msa0458220:intron |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 3_3:+53577375 | None:intergenic |
| TATGTAGTATAATAATATTC+TGG | 0.351740 | 3_3:+53575092 | None:intergenic |
| AAAGAGAATAGTTTCTATAA+GGG | 0.362474 | 3_3:+53579765 | None:intergenic |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3_3:+53575187 | None:intergenic |
| CATTGATCCTGAGTACAAAA+TGG | 0.372906 | 3_3:-53576279 | Msa0458220:intron |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3_3:-53577980 | Msa0458220:intron |
| CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3_3:-53577536 | Msa0458220:intron |
| TTGTTGCGAGGGATGCTATA+GGG | 0.380417 | 3_3:-53578118 | Msa0458220:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3_3:-53578422 | Msa0458220:intron |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3_3:-53578083 | Msa0458220:intron |
| CTCAAAACTAGAGGATCATA+AGG | 0.390752 | 3_3:+53577813 | None:intergenic |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.391623 | 3_3:-53577572 | Msa0458220:CDS |
| TGGAGGTTTGGATTCGTCAT+TGG | 0.393459 | 3_3:-53577626 | Msa0458220:CDS |
| GAATTGAGAAATGGATTCTA+AGG | 0.401660 | 3_3:-53576150 | Msa0458220:CDS |
| CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3_3:-53575265 | Msa0458220:CDS |
| TCACTTCCTTGTACATTGGT+TGG | 0.408558 | 3_3:-53578094 | Msa0458220:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3_3:+53578362 | None:intergenic |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3_3:-53576619 | Msa0458220:CDS |
| AAGATGGAAATCTCTAATCT+TGG | 0.417057 | 3_3:-53575169 | Msa0458220:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 3_3:-53577390 | Msa0458220:intron |
| TGGTGGAGCCCACTCCAGTC+TGG | 0.424835 | 3_3:+53578631 | None:intergenic |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3_3:-53575185 | Msa0458220:CDS |
| ATATGATGTTACTACAATTA+GGG | 0.435490 | 3_3:-53576675 | Msa0458220:CDS |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.436093 | 3_3:-53576397 | Msa0458220:intron |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3_3:-53576561 | Msa0458220:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 3_3:+53577822 | None:intergenic |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 3_3:-53579729 | Msa0458220:CDS |
| AAGAAGGTAGAATTGAGAAA+TGG | 0.457528 | 3_3:-53576159 | Msa0458220:CDS |
| GGGGTCACTTCCTTGTACAT+TGG | 0.460121 | 3_3:-53578098 | Msa0458220:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 3_3:+53577814 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3_3:+53575141 | None:intergenic |
| ATTGTTGCGAGGGATGCTAT+AGG | 0.464075 | 3_3:-53578119 | Msa0458220:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.468716 | 3_3:-53575965 | Msa0458220:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 3_3:+53577380 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3_3:-53578092 | Msa0458220:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3_3:+53575761 | None:intergenic |
| TGAAGCACCGTGGTCCAGAC+TGG | 0.485903 | 3_3:-53578645 | Msa0458220:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3_3:-53578333 | Msa0458220:intron |
| TATAGTACCTTAGGCAGATA+AGG | 0.491088 | 3_3:+53576103 | None:intergenic |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.493861 | 3_3:-53577573 | Msa0458220:CDS |
| TTGGTAAGTGGAGTATTGAA+AGG | 0.495646 | 3_3:+53575773 | None:intergenic |
| TTTCAGATAAAACATGAAGA+AGG | 0.497554 | 3_3:-53576175 | Msa0458220:intron |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3_3:-53576618 | Msa0458220:CDS |
| TCTCGTAAGATCAAATCATC+AGG | 0.505315 | 3_3:-53576629 | Msa0458220:CDS |
| CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3_3:+53575272 | None:intergenic |
| CAATAAATCAACATATGCAT+GGG | 0.509465 | 3_3:-53576357 | Msa0458220:CDS |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3_3:-53577878 | Msa0458220:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3_3:-53577959 | Msa0458220:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3_3:-53579701 | Msa0458220:CDS |
| TTTAAAACAAAGACTAGATG+TGG | 0.519468 | 3_3:+53574960 | None:intergenic |
| GTGATGGAGTTGGCTATGGT+TGG | 0.526188 | 3_3:-53575961 | Msa0458220:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3_3:+53578562 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 3_3:-53578600 | Msa0458220:CDS |
| CAGAAGGAGCAGTTCAGTGA+TGG | 0.534684 | 3_3:-53575977 | Msa0458220:CDS |
| ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3_3:-53577893 | Msa0458220:CDS |
| CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3_3:-53577892 | Msa0458220:CDS |
| TGAGAAATGGATTCTAAGGA+AGG | 0.538302 | 3_3:-53576146 | Msa0458220:CDS |
| CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3_3:-53578129 | Msa0458220:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 3_3:-53577386 | Msa0458220:CDS |
| AGCAGTCACTGCTAGATACC+TGG | 0.543495 | 3_3:-53577599 | Msa0458220:CDS |
| TCTACAACCATGAAGACCTC+AGG | 0.544557 | 3_3:-53578394 | Msa0458220:CDS |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3_3:+53578614 | None:intergenic |
| TTATGTTAAATTTGAATGCA+AGG | 0.545966 | 3_3:-53574875 | Msa0458220:three_prime_UTR |
| CCAATAAATCAACATATGCA+TGG | 0.548770 | 3_3:-53576358 | Msa0458220:CDS |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3_3:-53576602 | Msa0458220:CDS |
| ACCGTGGTCCAGACTGGAGT+GGG | 0.551709 | 3_3:-53578639 | Msa0458220:CDS |
| TTTGAGGAATGCCTTTGAGA+AGG | 0.557124 | 3_3:-53577796 | Msa0458220:intron |
| AGAGAATCCTTATCTGCCTA+AGG | 0.558330 | 3_3:-53576110 | Msa0458220:intron |
| ATTGGATAAAATGTGAAGAG+AGG | 0.559792 | 3_3:+53579819 | None:intergenic |
| TGTGAATCTTACCTTCTCAA+AGG | 0.560195 | 3_3:+53577785 | None:intergenic |
| CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3_3:+53575265 | None:intergenic |
| TTGTAAACTGAAATTCATGA+TGG | 0.564593 | 3_3:+53577333 | None:intergenic |
| AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3_3:-53577544 | Msa0458220:CDS |
| GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3_3:-53576303 | Msa0458220:CDS |
| GTTGGCTATGGTTGGATCGA+TGG | 0.569704 | 3_3:-53575953 | Msa0458220:CDS |
| GCATCCTTGAGCTTTCTCGC+AGG | 0.571788 | 3_3:-53579674 | Msa0458220:intron |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3_3:+53578348 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3_3:-53579700 | Msa0458220:CDS |
| TGTTGCGAGGGATGCTATAG+GGG | 0.583881 | 3_3:-53578117 | Msa0458220:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3_3:-53575739 | Msa0458220:CDS |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3_3:+53575340 | None:intergenic |
| TTACGAGACATCAGAAACAT+AGG | 0.592773 | 3_3:+53576644 | None:intergenic |
| GAGCAGTTCAGTGATGGAGT+TGG | 0.594756 | 3_3:-53575971 | Msa0458220:CDS |
| TATAGTCAATAATTACATAG+AGG | 0.596872 | 3_3:-53575071 | Msa0458220:three_prime_UTR |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3_3:-53577661 | Msa0458220:CDS |
| AAAACAAGGTGCAAAGAGTG+TGG | 0.599956 | 3_3:+53579868 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3_3:+53578611 | None:intergenic |
| TCGATTTGTAGAACTCAGCA+AGG | 0.601528 | 3_3:-53575372 | Msa0458220:intron |
| ATTGCCTGCGAGAAAGCTCA+AGG | 0.606762 | 3_3:+53579670 | None:intergenic |
| GTAGATGGTACAATCCTCCA+TGG | 0.607175 | 3_3:-53577863 | Msa0458220:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3_3:+53578088 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3_3:-53575314 | Msa0458220:CDS |
| GTAGAACTCAGCAAGGCTAA+CGG | 0.609016 | 3_3:-53575365 | Msa0458220:intron |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3_3:-53575315 | Msa0458220:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3_3:+53578544 | None:intergenic |
| CACCGTGGTCCAGACTGGAG+TGG | 0.611314 | 3_3:-53578640 | Msa0458220:CDS |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3_3:-53578530 | Msa0458220:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3_3:+53577874 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 3_3:+53578378 | None:intergenic |
| AAGGCATTCCTCAAAACTAG+AGG | 0.619679 | 3_3:+53577804 | None:intergenic |
| AGCTAATATGAGACATGGCA+AGG | 0.619874 | 3_3:-53575133 | Msa0458220:exon |
| GTCACTGCTAGATACCTGGC+TGG | 0.621089 | 3_3:-53577595 | Msa0458220:CDS |
| TCTTTGATCATCACAATGTG+TGG | 0.626178 | 3_3:-53579747 | Msa0458220:exon |
| GCCCACTCCAGTCTGGACCA+CGG | 0.634064 | 3_3:+53578638 | None:intergenic |
| ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3_3:-53578130 | Msa0458220:CDS |
| TTCAAAGCTAATATGAGACA+TGG | 0.641602 | 3_3:-53575138 | Msa0458220:exon |
| TGGAGTGGGCTCCACCAACA+TGG | 0.641715 | 3_3:-53578625 | Msa0458220:CDS |
| TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3_3:+53577900 | None:intergenic |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3_3:+53577646 | None:intergenic |
| CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3_3:+53577903 | None:intergenic |
| ATAATAGCCTCATTGAACCA+TGG | 0.651148 | 3_3:+53577846 | None:intergenic |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3_3:-53576519 | Msa0458220:intron |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 3_3:+53577815 | None:intergenic |
| CAATCCTCCATGGTTCAATG+AGG | 0.664816 | 3_3:-53577853 | Msa0458220:CDS |
| GGATGGCATAGATGCAATCG+AGG | 0.665437 | 3_3:-53576720 | Msa0458220:CDS |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 3_3:+53578573 | None:intergenic |
| AATAAATCAACATATGCATG+GGG | 0.691237 | 3_3:-53576356 | Msa0458220:CDS |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.694915 | 3_3:-53577571 | Msa0458220:CDS |
| GCAAGGCTAACGGTTCCTGG+AGG | 0.726931 | 3_3:-53575355 | Msa0458220:CDS |
| ATAGCCTCATTGAACCATGG+AGG | 0.754515 | 3_3:+53577849 | None:intergenic |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3_3:-53578655 | Msa0458220:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAACTCT+AGG | + | chr3_3:53575244-53575263 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTTGTATTTTG+TGG | - | chr3_3:53575255-53575274 | Msa0458220:CDS | 10.0% |
| !!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3_3:53575662-53575681 | None:intergenic | 10.0% |
| !! | ATATAATTATCCATTTATAT+TGG | - | chr3_3:53575696-53575715 | Msa0458220:intron | 10.0% |
| !! | TATAATTATCCATTTATATT+GGG | - | chr3_3:53575697-53575716 | Msa0458220:intron | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3_3:53576322-53576341 | Msa0458220:CDS | 10.0% |
| !!! | AAAGGGTATATTTATATAAA+AGG | + | chr3_3:53575147-53575166 | None:intergenic | 15.0% |
| !!! | TTTATATAAATATACCCTTT+TGG | - | chr3_3:53575147-53575166 | Msa0458220:exon | 15.0% |
| !!! | AAAATATTTTGGTTTTAAGA+GGG | - | chr3_3:53575396-53575415 | Msa0458220:intron | 15.0% |
| !! | AACACTAATTAATACATATA+TGG | - | chr3_3:53575449-53575468 | Msa0458220:intron | 15.0% |
| !! | TATATGGCTATAATATAATA+TGG | - | chr3_3:53575465-53575484 | Msa0458220:intron | 15.0% |
| !!! | TGGTTTTTTATTTTTTTCAA+TGG | + | chr3_3:53575638-53575657 | None:intergenic | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3_3:53575950-53575969 | Msa0458220:CDS | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3_3:53575951-53575970 | Msa0458220:CDS | 15.0% |
| !! | GAGTTATTAATTATTCTAAT+TGG | + | chr3_3:53576009-53576028 | None:intergenic | 15.0% |
| !! | TAAACTATAGAATATTACTA+GGG | + | chr3_3:53576257-53576276 | None:intergenic | 15.0% |
| !! | ATAAACTATAGAATATTACT+AGG | + | chr3_3:53576258-53576277 | None:intergenic | 15.0% |
| !!! | ATTAGCAATGTTTTAAATAA+AGG | + | chr3_3:53576483-53576502 | None:intergenic | 15.0% |
| !!! | TTATTTTTTATGTTAGTATG+AGG | - | chr3_3:53576532-53576551 | Msa0458220:CDS | 15.0% |
| !! | GGATTATTAAAAAATTTCAA+TGG | - | chr3_3:53577280-53577299 | Msa0458220:intron | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3_3:53577330-53577349 | Msa0458220:CDS | 15.0% |
| !!! | ACATTTTTTATAATACCATA+AGG | - | chr3_3:53577959-53577978 | Msa0458220:CDS | 15.0% |
| !!! | CATTTTTTATAATACCATAA+GGG | - | chr3_3:53577960-53577979 | Msa0458220:CDS | 15.0% |
| !!! | ATTTTTTATAATACCATAAG+GGG | - | chr3_3:53577961-53577980 | Msa0458220:CDS | 15.0% |
| !!! | TCATTATTAATTTTTTTGTG+TGG | - | chr3_3:53578000-53578019 | Msa0458220:intron | 15.0% |
| !! | TATGTAGTATAATAATATTC+TGG | + | chr3_3:53579662-53579681 | None:intergenic | 15.0% |
| !! | AAAGAGAATAGTTTCTATAA+GGG | + | chr3_3:53574989-53575008 | None:intergenic | 20.0% |
| !! | AATATCAAAGTTAACCAAAA+GGG | + | chr3_3:53575164-53575183 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCAAA+AGG | + | chr3_3:53575165-53575184 | None:intergenic | 20.0% |
| !!! | GAGTTTTTATTATATTGATG+AGG | - | chr3_3:53575352-53575371 | Msa0458220:CDS | 20.0% |
| !!! | AATGGAAGTTCAAAATATTT+TGG | - | chr3_3:53575385-53575404 | Msa0458220:intron | 20.0% |
| !!! | CAAAATATTTTGGTTTTAAG+AGG | - | chr3_3:53575395-53575414 | Msa0458220:intron | 20.0% |
| !! | TACTAGAAAAATCACAAAAA+TGG | - | chr3_3:53575537-53575556 | Msa0458220:intron | 20.0% |
| !!! | TTTTTTCAATGGCAAAATAT+TGG | + | chr3_3:53575627-53575646 | None:intergenic | 20.0% |
| !!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3_3:53575658-53575677 | None:intergenic | 20.0% |
| !!! | TTGTAACTTGTAAATAGTTT+AGG | - | chr3_3:53575740-53575759 | Msa0458220:CDS | 20.0% |
| !! | AATAAACAAAAGTAAGACAT+GGG | - | chr3_3:53575832-53575851 | Msa0458220:intron | 20.0% |
| !! | ATAACTCTAATAAGTAACTT+TGG | - | chr3_3:53576022-53576041 | Msa0458220:intron | 20.0% |
| !! | TGCTATATAGTATAATAAAG+TGG | - | chr3_3:53576289-53576308 | Msa0458220:CDS | 20.0% |
| !!! | GAATCAAAAATCAATTTTAG+TGG | - | chr3_3:53577259-53577278 | Msa0458220:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr3_3:53577343-53577362 | Msa0458220:CDS | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr3_3:53577344-53577363 | Msa0458220:CDS | 20.0% |
| !! | ATATGATGTTACTACAATTA+GGG | - | chr3_3:53578076-53578095 | Msa0458220:intron | 20.0% |
| !! | TGAAATTAGAAAGAAAATGT+TGG | + | chr3_3:53578861-53578880 | None:intergenic | 20.0% |
| !!! | AATAATATTCTGGCTTTATT+AGG | + | chr3_3:53579652-53579671 | None:intergenic | 20.0% |
| !! | TATAGTCAATAATTACATAG+AGG | - | chr3_3:53579680-53579699 | Msa0458220:CDS | 20.0% |
| !! | AACACTATGATATTGTAATT+TGG | - | chr3_3:53579830-53579849 | Msa0458220:five_prime_UTR | 20.0% |
| !! | TTATGTTAAATTTGAATGCA+AGG | - | chr3_3:53579876-53579895 | Msa0458220:five_prime_UTR | 20.0% |
| ! | AGAGAAAGAAAAAAAAGGAT+TGG | + | chr3_3:53574953-53574972 | None:intergenic | 25.0% |
| ! | TGAAGAGAGAAAGAAAAAAA+AGG | + | chr3_3:53574958-53574977 | None:intergenic | 25.0% |
| ! | CAAAGAGAATAGTTTCTATA+AGG | + | chr3_3:53574990-53575009 | None:intergenic | 25.0% |
| ! | ATAAAAAACTCTAGGTAAAG+AGG | + | chr3_3:53575236-53575255 | None:intergenic | 25.0% |
| ! | GATAAGTGATATACAAGTAA+AGG | - | chr3_3:53575513-53575532 | Msa0458220:intron | 25.0% |
| ! | GAATAAACAAAAGTAAGACA+TGG | - | chr3_3:53575831-53575850 | Msa0458220:intron | 25.0% |
| ! | ATAAACAAAAGTAAGACATG+GGG | - | chr3_3:53575833-53575852 | Msa0458220:intron | 25.0% |
| ! | TGTTGTTATGATGCAATAAT+TGG | - | chr3_3:53575862-53575881 | Msa0458220:intron | 25.0% |
| ! | TTATGATGCAATAATTGGTT+CGG | - | chr3_3:53575867-53575886 | Msa0458220:intron | 25.0% |
| !!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3_3:53575900-53575919 | None:intergenic | 25.0% |
| ! | AAAATAAAAATTCCACATGC+AGG | + | chr3_3:53575939-53575958 | None:intergenic | 25.0% |
| ! | TTGGACTTTATGTATATGAA+CGG | + | chr3_3:53575990-53576009 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3_3:53576221-53576240 | Msa0458220:intron | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3_3:53576329-53576348 | Msa0458220:CDS | 25.0% |
| !!! | ACCATGAATGTTATTGATTT+TGG | - | chr3_3:53576509-53576528 | Msa0458220:intron | 25.0% |
| ! | ACCAAAATCAATAACATTCA+TGG | + | chr3_3:53576513-53576532 | None:intergenic | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3_3:53576741-53576760 | Msa0458220:intron | 25.0% |
| !!! | ATTGATCCTCATTTTTAAGT+CGG | - | chr3_3:53576994-53577013 | Msa0458220:intron | 25.0% |
| ! | TGGAAAAAAACATTCATTTG+AGG | - | chr3_3:53577300-53577319 | Msa0458220:intron | 25.0% |
| ! | TTGTAAACTGAAATTCATGA+TGG | + | chr3_3:53577421-53577440 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACAATTC+AGG | - | chr3_3:53577424-53577443 | Msa0458220:intron | 25.0% |
| ! | CATATGATGTTACTACAATT+AGG | - | chr3_3:53578075-53578094 | Msa0458220:intron | 25.0% |
| ! | CAATAAATCAACATATGCAT+GGG | - | chr3_3:53578394-53578413 | Msa0458220:CDS | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | - | chr3_3:53578395-53578414 | Msa0458220:CDS | 25.0% |
| ! | TTTCAGATAAAACATGAAGA+AGG | - | chr3_3:53578576-53578595 | Msa0458220:CDS | 25.0% |
| ! | AAAGTAGAATATAGTACCTT+AGG | + | chr3_3:53578660-53578679 | None:intergenic | 25.0% |
| !!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3_3:53578877-53578896 | Msa0458220:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr3_3:53579000-53579019 | None:intergenic | 25.0% |
| ! | TAATTATTGCTAACGAGTTA+GGG | - | chr3_3:53579091-53579110 | Msa0458220:intron | 25.0% |
| !! | AAAAAATTGTCAGACTTTTG+CGG | - | chr3_3:53579157-53579176 | Msa0458220:intron | 25.0% |
| !!! | GTTTTAATTATAAGCTATCC+TGG | + | chr3_3:53579233-53579252 | None:intergenic | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3_3:53579350-53579369 | None:intergenic | 25.0% |
| ! | CAAATGCTATGTTATGTATA+AGG | - | chr3_3:53579734-53579753 | Msa0458220:CDS | 25.0% |
| !! | TTTAAAACAAAGACTAGATG+TGG | + | chr3_3:53579794-53579813 | None:intergenic | 25.0% |
| !!! | GTCTTTGTTTTAAATTGATG+TGG | - | chr3_3:53579800-53579819 | Msa0458220:five_prime_UTR | 25.0% |
| ATTGGATAAAATGTGAAGAG+AGG | + | chr3_3:53574935-53574954 | None:intergenic | 30.0% | |
| ! | TTTTGTGGTTTAGAAGTTCA+TGG | - | chr3_3:53575270-53575289 | Msa0458220:CDS | 30.0% |
| TTTGTGGTTTAGAAGTTCAT+GGG | - | chr3_3:53575271-53575290 | Msa0458220:CDS | 30.0% | |
| AGTAGTTGAGATTGATATCA+AGG | - | chr3_3:53575294-53575313 | Msa0458220:CDS | 30.0% | |
| TCACTATGACATTTAATACG+AGG | + | chr3_3:53575582-53575601 | None:intergenic | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3_3:53575724-53575743 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3_3:53575725-53575744 | None:intergenic | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | - | chr3_3:53575765-53575784 | Msa0458220:CDS | 30.0% | |
| TATTGCATCATAACAACATG+TGG | + | chr3_3:53575860-53575879 | None:intergenic | 30.0% | |
| !!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3_3:53575901-53575920 | None:intergenic | 30.0% |
| !! | AAATTAATTTGTCCTGCATG+TGG | - | chr3_3:53575924-53575943 | Msa0458220:intron | 30.0% |
| TGGACTTTATGTATATGAAC+GGG | + | chr3_3:53575989-53576008 | None:intergenic | 30.0% | |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3_3:53576151-53576170 | Msa0458220:CDS | 30.0% |
| TTATGTTAGTATGAGGAGTA+TGG | - | chr3_3:53576539-53576558 | Msa0458220:CDS | 30.0% | |
| ! | AGAAAATTTTGTGGACATGT+TGG | - | chr3_3:53576562-53576581 | Msa0458220:CDS | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | - | chr3_3:53576589-53576608 | Msa0458220:CDS | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3_3:53576771-53576790 | Msa0458220:intron | 30.0% |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3_3:53576791-53576810 | Msa0458220:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3_3:53576792-53576811 | Msa0458220:intron | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | + | chr3_3:53576940-53576959 | None:intergenic | 30.0% | |
| !!! | ATTTTTAAGTCGGTTCTGTA+AGG | - | chr3_3:53577004-53577023 | Msa0458220:intron | 30.0% |
| CGATTTATGTGTTTGATTAC+AGG | - | chr3_3:53577053-53577072 | Msa0458220:intron | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3_3:53577207-53577226 | Msa0458220:intron | 30.0% | |
| ! | TTTCACAATTTTGAGCAGAA+AGG | + | chr3_3:53577476-53577495 | None:intergenic | 30.0% |
| CTCAAAATTGTGAAAAGTTG+CGG | - | chr3_3:53577481-53577500 | Msa0458220:intron | 30.0% | |
| AGAAAAGTTACAGTCGAATA+AGG | - | chr3_3:53577604-53577623 | Msa0458220:CDS | 30.0% | |
| !! | ATAATTTTGTTTGCCCCTTA+TGG | + | chr3_3:53577977-53577996 | None:intergenic | 30.0% |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3_3:53578190-53578209 | Msa0458220:CDS | 30.0% |
| ! | AATGTAGTTCTATTACCTTG+CGG | + | chr3_3:53578250-53578269 | None:intergenic | 30.0% |
| GGTAATAGAACTACATTACA+TGG | - | chr3_3:53578253-53578272 | Msa0458220:intron | 30.0% | |
| !! | CCATGCATATGTTGATTTAT+TGG | + | chr3_3:53578396-53578415 | None:intergenic | 30.0% |
| CCAATAAATCAACATATGCA+TGG | - | chr3_3:53578393-53578412 | Msa0458220:CDS | 30.0% | |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3_3:53578437-53578456 | None:intergenic | 30.0% | |
| AAGAAGGTAGAATTGAGAAA+TGG | - | chr3_3:53578592-53578611 | Msa0458220:CDS | 30.0% | |
| ! | GAATTGAGAAATGGATTCTA+AGG | - | chr3_3:53578601-53578620 | Msa0458220:CDS | 30.0% |
| GAACAGAAATTGTAGCAAAT+GGG | + | chr3_3:53578683-53578702 | None:intergenic | 30.0% | |
| TGAACAGAAATTGTAGCAAA+TGG | + | chr3_3:53578684-53578703 | None:intergenic | 30.0% | |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr3_3:53578751-53578770 | Msa0458220:intron | 30.0% |
| ! | GTTCTTGAAATTTTTCGTGT+AGG | - | chr3_3:53578917-53578936 | Msa0458220:intron | 30.0% |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3_3:53578993-53579012 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr3_3:53579012-53579031 | Msa0458220:intron | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | + | chr3_3:53579043-53579062 | None:intergenic | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | + | chr3_3:53579044-53579063 | None:intergenic | 30.0% | |
| GTAATTATTGCTAACGAGTT+AGG | - | chr3_3:53579090-53579109 | Msa0458220:intron | 30.0% | |
| TCCCAATAGAACCTTAATAA+AGG | - | chr3_3:53579336-53579355 | Msa0458220:intron | 30.0% | |
| GCCTTTATTAAGGTTCTATT+GGG | + | chr3_3:53579340-53579359 | None:intergenic | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3_3:53579567-53579586 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3_3:53579566-53579585 | Msa0458220:intron | 30.0% | |
| AGATTAGAGATTTCCATCTT+TGG | + | chr3_3:53579582-53579601 | None:intergenic | 30.0% | |
| AAGATGGAAATCTCTAATCT+TGG | - | chr3_3:53579582-53579601 | Msa0458220:intron | 30.0% | |
| !! | TGTCTCATATTAGCTTTGAA+TGG | + | chr3_3:53579613-53579632 | None:intergenic | 30.0% |
| TTCAAAGCTAATATGAGACA+TGG | - | chr3_3:53579613-53579632 | Msa0458220:intron | 30.0% | |
| AGAAGAAGACACGAAAAACA+AGG | + | chr3_3:53574900-53574919 | None:intergenic | 35.0% | |
| TCTTTGATCATCACAATGTG+TGG | - | chr3_3:53575004-53575023 | Msa0458220:three_prime_UTR | 35.0% | |
| TGATGAGGAAGAATGAAGAA+TGG | - | chr3_3:53575367-53575386 | Msa0458220:intron | 35.0% | |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3_3:53575723-53575742 | None:intergenic | 35.0% |
| AATAGTTATCACCATGTTGG+TGG | + | chr3_3:53576140-53576159 | None:intergenic | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3_3:53576143-53576162 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3_3:53576140-53576159 | Msa0458220:CDS | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3_3:53576210-53576229 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3_3:53576392-53576411 | None:intergenic | 35.0% | |
| ! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3_3:53576553-53576572 | Msa0458220:CDS | 35.0% |
| ! | AATTTTGTGGACATGTTGGA+TGG | - | chr3_3:53576566-53576585 | Msa0458220:CDS | 35.0% |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3_3:53576761-53576780 | Msa0458220:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3_3:53576833-53576852 | Msa0458220:intron | 35.0% |
| ATAATAGCCTCATTGAACCA+TGG | + | chr3_3:53576908-53576927 | None:intergenic | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | + | chr3_3:53576939-53576958 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | + | chr3_3:53576941-53576960 | None:intergenic | 35.0% | |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | - | chr3_3:53576939-53576958 | Msa0458220:intron | 35.0% |
| TGTGAATCTTACCTTCTCAA+AGG | + | chr3_3:53576969-53576988 | None:intergenic | 35.0% | |
| ! | ACAGAACCGACTTAAAAATG+AGG | + | chr3_3:53577003-53577022 | None:intergenic | 35.0% |
| GATTACAGGCTGTCATAAAA+AGG | - | chr3_3:53577067-53577086 | Msa0458220:intron | 35.0% | |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3_3:53577113-53577132 | Msa0458220:intron | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr3_3:53577389-53577408 | Msa0458220:CDS | 35.0% |
| TGAAAAGTTGCGGTCAAATA+GGG | - | chr3_3:53577491-53577510 | Msa0458220:intron | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | - | chr3_3:53577670-53577689 | Msa0458220:CDS | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | - | chr3_3:53577671-53577690 | Msa0458220:CDS | 35.0% | |
| CTCAAAATTGCGAAAAGTTG+CGG | - | chr3_3:53577725-53577744 | Msa0458220:intron | 35.0% | |
| TGAAGTCACAATCTAGATTG+CGG | - | chr3_3:53577932-53577951 | Msa0458220:CDS | 35.0% | |
| !!! | TTTTTTTGTGTGGTCTATGC+AGG | - | chr3_3:53578010-53578029 | Msa0458220:intron | 35.0% |
| TTACGAGACATCAGAAACAT+AGG | + | chr3_3:53578110-53578129 | None:intergenic | 35.0% | |
| TCTCGTAAGATCAAATCATC+AGG | - | chr3_3:53578122-53578141 | Msa0458220:CDS | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3_3:53578132-53578151 | Msa0458220:CDS | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3_3:53578133-53578152 | Msa0458220:CDS | 35.0% | |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr3_3:53578167-53578186 | Msa0458220:CDS | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr3_3:53578171-53578190 | Msa0458220:CDS | 35.0% |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3_3:53578218-53578237 | None:intergenic | 35.0% | |
| ATTACATGGCTCATGTTTGA+AGG | - | chr3_3:53578267-53578286 | Msa0458220:intron | 35.0% | |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3_3:53578421-53578440 | Msa0458220:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3_3:53578427-53578446 | Msa0458220:intron | 35.0% |
| GGATTTCATCAAAGTTGCAA+TGG | - | chr3_3:53578448-53578467 | Msa0458220:intron | 35.0% | |
| CATTGATCCTGAGTACAAAA+TGG | - | chr3_3:53578472-53578491 | Msa0458220:intron | 35.0% | |
| ! | TATCGTACCATTTTGTACTC+AGG | + | chr3_3:53578482-53578501 | None:intergenic | 35.0% |
| ! | TGAGAAATGGATTCTAAGGA+AGG | - | chr3_3:53578605-53578624 | Msa0458220:CDS | 35.0% |
| TATAGTACCTTAGGCAGATA+AGG | + | chr3_3:53578651-53578670 | None:intergenic | 35.0% | |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr3_3:53578758-53578777 | Msa0458220:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3_3:53578833-53578852 | None:intergenic | 35.0% |
| !! | TTGGTAAGTGGAGTATTGAA+AGG | + | chr3_3:53578981-53579000 | None:intergenic | 35.0% |
| GCAATAATTACAATGTCGCT+TGG | + | chr3_3:53579081-53579100 | None:intergenic | 35.0% | |
| GGCCTTTATTAAGGTTCTAT+TGG | + | chr3_3:53579341-53579360 | None:intergenic | 35.0% | |
| !!! | GCCTGTTGTGTATTTTTTCA+AGG | - | chr3_3:53579711-53579730 | Msa0458220:CDS | 35.0% |
| GCCTTGAAAAAATACACAAC+AGG | + | chr3_3:53579715-53579734 | None:intergenic | 35.0% | |
| AAAACAAGGTGCAAAGAGTG+TGG | + | chr3_3:53574886-53574905 | None:intergenic | 40.0% | |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr3_3:53575022-53575041 | Msa0458220:three_prime_UTR | 40.0% |
| TGATGACTCACAAGCTAAGA+GGG | - | chr3_3:53575051-53575070 | Msa0458220:three_prime_UTR | 40.0% | |
| GGTAAAGAGGAGTTTGATCA+TGG | + | chr3_3:53575223-53575242 | None:intergenic | 40.0% | |
| ATTGTTTCCTGAGGTCTTCA+TGG | + | chr3_3:53576367-53576386 | None:intergenic | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | + | chr3_3:53576376-53576395 | None:intergenic | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr3_3:53576406-53576425 | None:intergenic | 40.0% | |
| ACAACAGTTTCATTGTTGCG+AGG | - | chr3_3:53576621-53576640 | Msa0458220:CDS | 40.0% | |
| CAACAGTTTCATTGTTGCGA+GGG | - | chr3_3:53576622-53576641 | Msa0458220:CDS | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3_3:53576657-53576676 | Msa0458220:CDS | 40.0% | |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3_3:53576658-53576677 | Msa0458220:CDS | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3_3:53576659-53576678 | Msa0458220:CDS | 40.0% |
| ! | AAGGCATTCCTCAAAACTAG+AGG | + | chr3_3:53576950-53576969 | None:intergenic | 40.0% |
| ! | TTTGAGGAATGCCTTTGAGA+AGG | - | chr3_3:53576955-53576974 | Msa0458220:intron | 40.0% |
| CTGTAAGGTTGAGTTAGACT+CGG | - | chr3_3:53577019-53577038 | Msa0458220:intron | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3_3:53577108-53577127 | None:intergenic | 40.0% | |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3_3:53577108-53577127 | Msa0458220:intron | 40.0% |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr3_3:53577179-53577198 | Msa0458220:intron | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr3_3:53577180-53577199 | Msa0458220:intron | 40.0% | |
| CTCATTCTGTGTAGGACTTA+AGG | - | chr3_3:53577215-53577234 | Msa0458220:intron | 40.0% | |
| GTGAAAAGTTGCGGTCAAAT+AGG | - | chr3_3:53577490-53577509 | Msa0458220:intron | 40.0% | |
| TTGATGTCACAGTCTGAACT+TGG | - | chr3_3:53577800-53577819 | Msa0458220:CDS | 40.0% | |
| TGATGTCACAGTCTGAACTT+GGG | - | chr3_3:53577801-53577820 | Msa0458220:CDS | 40.0% | |
| CGAAAAGTTGCAGTCAACTA+GGG | - | chr3_3:53577865-53577884 | Msa0458220:CDS | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3_3:53578149-53578168 | Msa0458220:CDS | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr3_3:53578170-53578189 | Msa0458220:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3_3:53578208-53578227 | None:intergenic | 40.0% |
| TGCAGATCAAAGCTCTTCAT+AGG | - | chr3_3:53578354-53578373 | Msa0458220:CDS | 40.0% | |
| AGAGAATCCTTATCTGCCTA+AGG | - | chr3_3:53578641-53578660 | Msa0458220:CDS | 40.0% | |
| TGGTTGGATCGATGGTATTA+AGG | - | chr3_3:53578806-53578825 | Msa0458220:intron | 40.0% | |
| ! | TCGATTTGTAGAACTCAGCA+AGG | - | chr3_3:53579379-53579398 | Msa0458220:intron | 40.0% |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3_3:53579437-53579456 | Msa0458220:intron | 40.0% | |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3_3:53579536-53579555 | None:intergenic | 40.0% |
| AGCTAATATGAGACATGGCA+AGG | - | chr3_3:53579618-53579637 | Msa0458220:intron | 40.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr3_3:53575050-53575069 | Msa0458220:three_prime_UTR | 45.0% | |
| GCATTGGGGCCCAATATAAA+TGG | + | chr3_3:53575709-53575728 | None:intergenic | 45.0% | |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3_3:53576181-53576200 | None:intergenic | 45.0% | |
| TCTACAACCATGAAGACCTC+AGG | - | chr3_3:53576357-53576376 | Msa0458220:CDS | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3_3:53576418-53576437 | Msa0458220:intron | 45.0% | |
| ATTGTTGCGAGGGATGCTAT+AGG | - | chr3_3:53576632-53576651 | Msa0458220:CDS | 45.0% | |
| TTGTTGCGAGGGATGCTATA+GGG | - | chr3_3:53576633-53576652 | Msa0458220:CDS | 45.0% | |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3_3:53576666-53576685 | None:intergenic | 45.0% | |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3_3:53576668-53576687 | Msa0458220:CDS | 45.0% |
| ACTTGTACTCGAGCAAAGAC+CGG | - | chr3_3:53576858-53576877 | Msa0458220:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3_3:53576880-53576899 | None:intergenic | 45.0% | |
| GTAGATGGTACAATCCTCCA+TGG | - | chr3_3:53576888-53576907 | Msa0458220:intron | 45.0% | |
| CAATCCTCCATGGTTCAATG+AGG | - | chr3_3:53576898-53576917 | Msa0458220:intron | 45.0% | |
| ATAGCCTCATTGAACCATGG+AGG | + | chr3_3:53576905-53576924 | None:intergenic | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3_3:53576932-53576951 | None:intergenic | 45.0% | |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3_3:53577090-53577109 | Msa0458220:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3_3:53577105-53577124 | Msa0458220:intron | 45.0% |
| TGGAGGTTTGGATTCGTCAT+TGG | - | chr3_3:53577125-53577144 | Msa0458220:intron | 45.0% | |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr3_3:53577178-53577197 | Msa0458220:intron | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | + | chr3_3:53577379-53577398 | None:intergenic | 45.0% | |
| ! | CAAAGTCGCATCAGCGTTTT+TGG | + | chr3_3:53577752-53577771 | None:intergenic | 45.0% |
| GCGAAAAGTTGCAGTCAACT+AGG | - | chr3_3:53577864-53577883 | Msa0458220:CDS | 45.0% | |
| TTTGTGTGGTCTATGCAGGA+TGG | - | chr3_3:53578014-53578033 | Msa0458220:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3_3:53578143-53578162 | Msa0458220:CDS | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3_3:53578238-53578257 | None:intergenic | 45.0% | |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3_3:53578786-53578805 | Msa0458220:intron | 45.0% |
| !! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3_3:53579025-53579044 | Msa0458220:intron | 45.0% |
| ! | GCTCTTTTCATAAGCTCTCC+AGG | - | chr3_3:53579212-53579231 | Msa0458220:intron | 45.0% |
| GTAGAACTCAGCAAGGCTAA+CGG | - | chr3_3:53579386-53579405 | Msa0458220:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3_3:53579436-53579455 | Msa0458220:intron | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3_3:53579448-53579467 | Msa0458220:intron | 45.0% | |
| TCAAGCAACCTTGATCCTTC+TGG | - | chr3_3:53579471-53579490 | Msa0458220:intron | 45.0% | |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3_3:53579553-53579572 | None:intergenic | 45.0% |
| !!! | TTTTTAAAAAAAATTTAACA+TGG | - | chr3_3:53575330-53575349 | Msa0458220:CDS | 5.0% |
| ATTGCCTGCGAGAAAGCTCA+AGG | + | chr3_3:53575084-53575103 | None:intergenic | 50.0% | |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3_3:53576096-53576115 | Msa0458220:intron | 50.0% |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3_3:53576177-53576196 | Msa0458220:intron | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3_3:53576192-53576211 | None:intergenic | 50.0% |
| TGTTGCGAGGGATGCTATAG+GGG | - | chr3_3:53576634-53576653 | Msa0458220:CDS | 50.0% | |
| GGGGTCACTTCCTTGTACAT+TGG | - | chr3_3:53576653-53576672 | Msa0458220:CDS | 50.0% | |
| TTGCTCGAGTACAAGTGACC+AGG | + | chr3_3:53576854-53576873 | None:intergenic | 50.0% | |
| CTTGTACTCGAGCAAAGACC+GGG | - | chr3_3:53576859-53576878 | Msa0458220:intron | 50.0% | |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3_3:53576873-53576892 | Msa0458220:intron | 50.0% | |
| AGCAGTCACTGCTAGATACC+TGG | - | chr3_3:53577152-53577171 | Msa0458220:intron | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3_3:53577361-53577380 | Msa0458220:CDS | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | + | chr3_3:53577374-53577393 | None:intergenic | 50.0% | |
| GGATGGCATAGATGCAATCG+AGG | - | chr3_3:53578031-53578050 | Msa0458220:intron | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3_3:53578232-53578251 | Msa0458220:intron | 50.0% | |
| CAGAAGGAGCAGTTCAGTGA+TGG | - | chr3_3:53578774-53578793 | Msa0458220:intron | 50.0% | |
| ! | GAGCAGTTCAGTGATGGAGT+TGG | - | chr3_3:53578780-53578799 | Msa0458220:intron | 50.0% |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3_3:53578790-53578809 | Msa0458220:intron | 50.0% |
| GTTGGCTATGGTTGGATCGA+TGG | - | chr3_3:53578798-53578817 | Msa0458220:intron | 50.0% | |
| CTGCTCTTCCAGAAGGATCA+AGG | + | chr3_3:53579482-53579501 | None:intergenic | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+AGG | + | chr3_3:53579489-53579508 | None:intergenic | 50.0% | |
| ! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3_3:53579486-53579505 | Msa0458220:intron | 50.0% |
| GCATCCTTGAGCTTTCTCGC+AGG | - | chr3_3:53575077-53575096 | Msa0458220:three_prime_UTR | 55.0% | |
| CACACCTGGTTAGTATGCCG+CGG | - | chr3_3:53576432-53576451 | Msa0458220:intron | 55.0% | |
| TAGACCGCGGCATACTAACC+AGG | + | chr3_3:53576439-53576458 | None:intergenic | 55.0% | |
| GTATGCCGCGGTCTAGATTG+TGG | - | chr3_3:53576444-53576463 | Msa0458220:intron | 55.0% | |
| CTCGAGTACAAGTGACCAGG+TGG | + | chr3_3:53576851-53576870 | None:intergenic | 55.0% | |
| GTCACTGCTAGATACCTGGC+TGG | - | chr3_3:53577156-53577175 | Msa0458220:intron | 55.0% | |
| ! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3_3:53577173-53577192 | None:intergenic | 55.0% |
| TCAGCAAGGCTAACGGTTCC+TGG | - | chr3_3:53579393-53579412 | Msa0458220:intron | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3_3:53579414-53579433 | None:intergenic | 55.0% | |
| !! | TGAAGCACCGTGGTCCAGAC+TGG | - | chr3_3:53576106-53576125 | Msa0458220:intron | 60.0% |
| ACCGTGGTCCAGACTGGAGT+GGG | - | chr3_3:53576112-53576131 | Msa0458220:CDS | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3_3:53576126-53576145 | Msa0458220:CDS | 60.0% |
| CGCGACCACAATCTAGACCG+CGG | + | chr3_3:53576452-53576471 | None:intergenic | 60.0% | |
| CGCGGTCTAGATTGTGGTCG+CGG | - | chr3_3:53576450-53576469 | Msa0458220:intron | 60.0% | |
| CTAGATTGTGGTCGCGGTCG+CGG | - | chr3_3:53576456-53576475 | Msa0458220:intron | 60.0% | |
| GGTGCACCTGACCTTAAGGC+TGG | - | chr3_3:53577365-53577384 | Msa0458220:CDS | 60.0% | |
| GCAAGGCTAACGGTTCCTGG+AGG | - | chr3_3:53579396-53579415 | Msa0458220:intron | 60.0% | |
| CACCGTGGTCCAGACTGGAG+TGG | - | chr3_3:53576111-53576130 | Msa0458220:CDS | 65.0% | |
| GCCCACTCCAGTCTGGACCA+CGG | + | chr3_3:53576116-53576135 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+TGG | + | chr3_3:53576123-53576142 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 53574872 | 53579901 | 53574872 | ID=Msa0458220;Name=Msa0458220 |
| chr3_3 | mRNA | 53574872 | 53579901 | 53574872 | ID=Msa0458220-mRNA-1;Parent=Msa0458220;Name=Msa0458220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=147|1|1|1|1|1|13|278|586 |
| chr3_3 | exon | 53574872 | 53575383 | 53574872 | ID=Msa0458220-mRNA-1:exon:10518;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53575727 | 53575834 | 53575727 | ID=Msa0458220-mRNA-1:exon:10517;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53575928 | 53576014 | 53575928 | ID=Msa0458220-mRNA-1:exon:10516;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53576111 | 53576191 | 53576111 | ID=Msa0458220-mRNA-1:exon:10515;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53576280 | 53576414 | 53576280 | ID=Msa0458220-mRNA-1:exon:10514;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53576520 | 53576741 | 53576520 | ID=Msa0458220-mRNA-1:exon:10513;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53577328 | 53577408 | 53577328 | ID=Msa0458220-mRNA-1:exon:10512;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53577537 | 53577698 | 53577537 | ID=Msa0458220-mRNA-1:exon:10511;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53577797 | 53577990 | 53577797 | ID=Msa0458220-mRNA-1:exon:10510;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53578084 | 53578225 | 53578084 | ID=Msa0458220-mRNA-1:exon:10509;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53578334 | 53578429 | 53578334 | ID=Msa0458220-mRNA-1:exon:10508;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53578531 | 53578669 | 53578531 | ID=Msa0458220-mRNA-1:exon:10507;Parent=Msa0458220-mRNA-1 |
| chr3_3 | exon | 53579675 | 53579901 | 53579675 | ID=Msa0458220-mRNA-1:exon:10506;Parent=Msa0458220-mRNA-1 |
| chr3_3 | five_prime_UTR | 53579755 | 53579901 | 53579755 | ID=Msa0458220-mRNA-1:five_prime_utr;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53579675 | 53579754 | 53579675 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53578531 | 53578669 | 53578531 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53578334 | 53578429 | 53578334 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53578084 | 53578225 | 53578084 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53577797 | 53577990 | 53577797 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53577537 | 53577698 | 53577537 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53577328 | 53577408 | 53577328 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53576520 | 53576741 | 53576520 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53576280 | 53576414 | 53576280 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53576111 | 53576191 | 53576111 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53575928 | 53576014 | 53575928 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53575727 | 53575834 | 53575727 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | CDS | 53575150 | 53575383 | 53575150 | ID=Msa0458220-mRNA-1:cds;Parent=Msa0458220-mRNA-1 |
| chr3_3 | three_prime_UTR | 53574872 | 53575149 | 53574872 | ID=Msa0458220-mRNA-1:three_prime_utr;Parent=Msa0458220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
