Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504700 | AAB81011.1 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504700 | sp|P19251|ASNS1_PEA | 95.051 | 586 | 29 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504700 | O24483 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1223 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0504700 | -0.814029 | 1.897133e-51 | -8.615850e-47 |
| Msa0011920 | Msa0504700 | -0.850980 | 1.195027e-60 | -8.615850e-47 |
| Msa0030050 | Msa0504700 | 0.838758 | 2.378003e-57 | -8.615850e-47 |
| Msa0036560 | Msa0504700 | -0.804467 | 2.130245e-49 | -8.615850e-47 |
| Msa0037180 | Msa0504700 | 0.865221 | 6.908579e-65 | -8.615850e-47 |
| Msa0037280 | Msa0504700 | 0.824151 | 9.430377e-54 | -8.615850e-47 |
| Msa0037650 | Msa0504700 | -0.842182 | 3.022832e-58 | -8.615850e-47 |
| Msa0037720 | Msa0504700 | 0.853007 | 3.175533e-61 | -8.615850e-47 |
| Msa0039890 | Msa0504700 | 0.802396 | 5.723417e-49 | -8.615850e-47 |
| Msa0045310 | Msa0504700 | 0.808636 | 2.809670e-50 | -8.615850e-47 |
| Msa0052780 | Msa0504700 | 0.840304 | 9.427155e-58 | -8.615850e-47 |
| Msa0074860 | Msa0504700 | -0.818528 | 1.870208e-52 | -8.615850e-47 |
| Msa0075990 | Msa0504700 | -0.814830 | 1.261686e-51 | -8.615850e-47 |
| Msa0076640 | Msa0504700 | 0.825764 | 3.924430e-54 | -8.615850e-47 |
| Msa0081700 | Msa0504700 | -0.813780 | 2.152860e-51 | -8.615850e-47 |
| Msa0083240 | Msa0504700 | 0.868239 | 7.569830e-66 | -8.615850e-47 |
| Msa0087550 | Msa0504700 | 0.837631 | 4.639213e-57 | -8.615850e-47 |
| Msa0092220 | Msa0504700 | 0.864381 | 1.266589e-64 | -8.615850e-47 |
| Msa0093740 | Msa0504700 | 0.936237 | 2.393002e-97 | -8.615850e-47 |
| Msa0097570 | Msa0504700 | 0.837181 | 6.047117e-57 | -8.615850e-47 |
| Msa0103830 | Msa0504700 | 0.820332 | 7.254961e-53 | -8.615850e-47 |
| Msa0105480 | Msa0504700 | -0.807120 | 5.903687e-50 | -8.615850e-47 |
| Msa0127220 | Msa0504700 | -0.817336 | 3.477193e-52 | -8.615850e-47 |
| Msa0127910 | Msa0504700 | -0.829206 | 5.861581e-55 | -8.615850e-47 |
| Msa0129640 | Msa0504700 | 0.846442 | 2.167159e-59 | -8.615850e-47 |
| Msa0134270 | Msa0504700 | 0.827672 | 1.374783e-54 | -8.615850e-47 |
| Msa0138990 | Msa0504700 | -0.807057 | 6.087723e-50 | -8.615850e-47 |
| Msa0143630 | Msa0504700 | 0.805816 | 1.111958e-49 | -8.615850e-47 |
| Msa0145430 | Msa0504700 | 0.829147 | 6.057810e-55 | -8.615850e-47 |
| Msa0150330 | Msa0504700 | 0.805358 | 1.387700e-49 | -8.615850e-47 |
| Msa0159240 | Msa0504700 | -0.808233 | 3.424583e-50 | -8.615850e-47 |
| Msa0173950 | Msa0504700 | -0.803417 | 3.521846e-49 | -8.615850e-47 |
| Msa0174060 | Msa0504700 | -0.828485 | 8.757578e-55 | -8.615850e-47 |
| Msa0177320 | Msa0504700 | 0.859127 | 5.125806e-63 | -8.615850e-47 |
| Msa0178000 | Msa0504700 | 0.813095 | 3.044724e-51 | -8.615850e-47 |
| Msa0180820 | Msa0504700 | 0.802771 | 4.789695e-49 | -8.615850e-47 |
| Msa0203880 | Msa0504700 | 0.814047 | 1.879114e-51 | -8.615850e-47 |
| Msa0216150 | Msa0504700 | -0.845213 | 4.673405e-59 | -8.615850e-47 |
| Msa0223590 | Msa0504700 | 0.809848 | 1.544482e-50 | -8.615850e-47 |
| Msa0224210 | Msa0504700 | 0.810807 | 9.592418e-51 | -8.615850e-47 |
| Msa0225070 | Msa0504700 | -0.823752 | 1.169781e-53 | -8.615850e-47 |
| Msa0236690 | Msa0504700 | -0.810615 | 1.055425e-50 | -8.615850e-47 |
| Msa0238140 | Msa0504700 | 0.813351 | 2.674974e-51 | -8.615850e-47 |
| Msa0369990 | Msa0504700 | 0.808246 | 3.403339e-50 | -8.615850e-47 |
| Msa0381470 | Msa0504700 | 0.855964 | 4.429318e-62 | -8.615850e-47 |
| Msa0386890 | Msa0504700 | 0.835180 | 1.950018e-56 | -8.615850e-47 |
| Msa0389080 | Msa0504700 | -0.814236 | 1.707464e-51 | -8.615850e-47 |
| Msa0390590 | Msa0504700 | -0.827226 | 1.759057e-54 | -8.615850e-47 |
| Msa0390790 | Msa0504700 | 0.806791 | 6.927470e-50 | -8.615850e-47 |
| Msa0399810 | Msa0504700 | 0.812623 | 3.863388e-51 | -8.615850e-47 |
| Msa0399820 | Msa0504700 | 0.818520 | 1.878393e-52 | -8.615850e-47 |
| Msa0402800 | Msa0504700 | 0.832863 | 7.416243e-56 | -8.615850e-47 |
| Msa0403740 | Msa0504700 | -0.818524 | 1.873924e-52 | -8.615850e-47 |
| Msa0413130 | Msa0504700 | 0.928423 | 2.950022e-92 | -8.615850e-47 |
| Msa0417790 | Msa0504700 | -0.800682 | 1.285501e-48 | -8.615850e-47 |
| Msa0427560 | Msa0504700 | 0.804768 | 1.843598e-49 | -8.615850e-47 |
| Msa0449620 | Msa0504700 | 0.800750 | 1.244942e-48 | -8.615850e-47 |
| Msa0450890 | Msa0504700 | -0.805157 | 1.528525e-49 | -8.615850e-47 |
| Msa0456450 | Msa0504700 | -0.816871 | 4.422201e-52 | -8.615850e-47 |
| Msa0458220 | Msa0504700 | 0.971577 | 2.202565e-133 | -8.615850e-47 |
| Msa0470920 | Msa0504700 | 0.813313 | 2.726290e-51 | -8.615850e-47 |
| Msa0476070 | Msa0504700 | 0.829855 | 4.075285e-55 | -8.615850e-47 |
| Msa0481100 | Msa0504700 | 0.825159 | 5.458224e-54 | -8.615850e-47 |
| Msa0481310 | Msa0504700 | 0.800220 | 1.596644e-48 | -8.615850e-47 |
| Msa0238950 | Msa0504700 | 0.801769 | 7.700855e-49 | -8.615850e-47 |
| Msa0242790 | Msa0504700 | 0.801326 | 9.494056e-49 | -8.615850e-47 |
| Msa0247030 | Msa0504700 | 0.836111 | 1.133153e-56 | -8.615850e-47 |
| Msa0264890 | Msa0504700 | 0.828216 | 1.016784e-54 | -8.615850e-47 |
| Msa0266140 | Msa0504700 | -0.803012 | 4.270279e-49 | -8.615850e-47 |
| Msa0269660 | Msa0504700 | -0.804917 | 1.716173e-49 | -8.615850e-47 |
| Msa0270730 | Msa0504700 | -0.803530 | 3.336354e-49 | -8.615850e-47 |
| Msa0285420 | Msa0504700 | 0.860178 | 2.476198e-63 | -8.615850e-47 |
| Msa0294200 | Msa0504700 | 0.816183 | 6.306331e-52 | -8.615850e-47 |
| Msa0303900 | Msa0504700 | 0.802747 | 4.843759e-49 | -8.615850e-47 |
| Msa0304060 | Msa0504700 | -0.800263 | 1.564799e-48 | -8.615850e-47 |
| Msa0324220 | Msa0504700 | 0.860212 | 2.418365e-63 | -8.615850e-47 |
| Msa0333770 | Msa0504700 | 0.805970 | 1.032124e-49 | -8.615850e-47 |
| Msa0334450 | Msa0504700 | -0.826057 | 3.343334e-54 | -8.615850e-47 |
| Msa0340270 | Msa0504700 | 0.830327 | 3.125974e-55 | -8.615850e-47 |
| Msa0364030 | Msa0504700 | -0.817278 | 3.582008e-52 | -8.615850e-47 |
| Msa0497860 | Msa0504700 | 0.813720 | 2.219123e-51 | -8.615850e-47 |
| Msa0504700 | Msa0519910 | 0.859507 | 3.943991e-63 | -8.615850e-47 |
| Msa0504700 | Msa0524260 | 0.812851 | 3.443183e-51 | -8.615850e-47 |
| Msa0504700 | Msa0524370 | 0.815549 | 8.732054e-52 | -8.615850e-47 |
| Msa0504700 | Msa0526520 | -0.803641 | 3.164325e-49 | -8.615850e-47 |
| Msa0504700 | Msa0528930 | 0.818852 | 1.578826e-52 | -8.615850e-47 |
| Msa0504700 | Msa0537340 | 0.800085 | 1.700391e-48 | -8.615850e-47 |
| Msa0504700 | Msa0538050 | -0.815229 | 1.028810e-51 | -8.615850e-47 |
| Msa0504700 | Msa0560280 | 0.816417 | 5.590817e-52 | -8.615850e-47 |
| Msa0504700 | Msa0563230 | -0.805413 | 1.351076e-49 | -8.615850e-47 |
| Msa0504700 | Msa0563440 | 0.814258 | 1.688467e-51 | -8.615850e-47 |
| Msa0504700 | Msa0565180 | 0.807781 | 4.273911e-50 | -8.615850e-47 |
| Msa0504700 | Msa0568300 | -0.810291 | 1.239775e-50 | -8.615850e-47 |
| Msa0504700 | Msa0572730 | -0.827955 | 1.175448e-54 | -8.615850e-47 |
| Msa0504700 | Msa0580850 | 0.802746 | 4.845726e-49 | -8.615850e-47 |
| Msa0504700 | Msa0582270 | -0.806481 | 8.056696e-50 | -8.615850e-47 |
| Msa0504700 | Msa0588110 | -0.808785 | 2.611232e-50 | -8.615850e-47 |
| Msa0504700 | Msa0600350 | 0.830330 | 3.121652e-55 | -8.615850e-47 |
| Msa0504700 | Msa0605150 | -0.800673 | 1.290437e-48 | -8.615850e-47 |
| Msa0504700 | Msa0614290 | 0.824359 | 8.423326e-54 | -8.615850e-47 |
| Msa0504700 | Msa0617470 | -0.826155 | 3.168241e-54 | -8.615850e-47 |
| Msa0504700 | Msa0621670 | -0.846504 | 2.084105e-59 | -8.615850e-47 |
| Msa0504700 | Msa0626920 | 0.817455 | 3.268536e-52 | -8.615850e-47 |
| Msa0504700 | Msa0638810 | 0.811528 | 6.691544e-51 | -8.615850e-47 |
| Msa0504700 | Msa0638820 | 0.807236 | 5.578982e-50 | -8.615850e-47 |
| Msa0504700 | Msa0639530 | -0.830176 | 3.404032e-55 | -8.615850e-47 |
| Msa0504700 | Msa0657340 | 0.807560 | 4.761179e-50 | -8.615850e-47 |
| Msa0504700 | Msa0660650 | 0.804911 | 1.720651e-49 | -8.615850e-47 |
| Msa0504700 | Msa0672950 | 0.820495 | 6.655040e-53 | -8.615850e-47 |
| Msa0504700 | Msa0672980 | 0.840732 | 7.281180e-58 | -8.615850e-47 |
| Msa0504700 | Msa0697510 | 0.820759 | 5.788136e-53 | -8.615850e-47 |
| Msa0504700 | Msa0697520 | 0.810970 | 8.844510e-51 | -8.615850e-47 |
| Msa0504700 | Msa0700250 | -0.818121 | 2.312172e-52 | -8.615850e-47 |
| Msa0504700 | Msa0701430 | 0.812170 | 4.851804e-51 | -8.615850e-47 |
| Msa0504700 | Msa0702690 | -0.802416 | 5.669999e-49 | -8.615850e-47 |
| Msa0504700 | Msa0711110 | -0.805118 | 1.557841e-49 | -8.615850e-47 |
| Msa0504700 | Msa0717540 | -0.802586 | 5.228344e-49 | -8.615850e-47 |
| Msa0504700 | Msa0731690 | 0.800358 | 1.495957e-48 | -8.615850e-47 |
| Msa0504700 | Msa0753270 | 0.800994 | 1.110127e-48 | -8.615850e-47 |
| Msa0504700 | Msa0754020 | -0.826208 | 3.077468e-54 | -8.615850e-47 |
| Msa0504700 | Msa0758880 | -0.802889 | 4.528627e-49 | -8.615850e-47 |
| Msa0504700 | Msa0807100 | -0.828155 | 1.051887e-54 | -8.615850e-47 |
| Msa0504700 | Msa0816630 | 0.818663 | 1.743295e-52 | -8.615850e-47 |
| Msa0504700 | Msa0826370 | 0.802737 | 4.867848e-49 | -8.615850e-47 |
| Msa0504700 | Msa0826380 | 0.810710 | 1.006739e-50 | -8.615850e-47 |
| Msa0504700 | Msa0828350 | 0.806901 | 6.568179e-50 | -8.615850e-47 |
| Msa0504700 | Msa0832160 | -0.807768 | 4.301097e-50 | -8.615850e-47 |
| Msa0504700 | Msa0832520 | 0.803440 | 3.482001e-49 | -8.615850e-47 |
| Msa0504700 | Msa0833030 | -0.820074 | 8.312534e-53 | -8.615850e-47 |
| Msa0504700 | Msa0863940 | 0.827589 | 1.438957e-54 | -8.615850e-47 |
| Msa0504700 | Msa0873880 | 0.820398 | 7.006692e-53 | -8.615850e-47 |
| Msa0504700 | Msa0873910 | 0.846851 | 1.674720e-59 | -8.615850e-47 |
| Msa0504700 | Msa0873940 | 0.808202 | 3.477974e-50 | -8.615850e-47 |
| Msa0504700 | Msa0906660 | 0.808585 | 2.880955e-50 | -8.615850e-47 |
| Msa0504700 | Msa0906680 | 0.841912 | 3.563045e-58 | -8.615850e-47 |
| Msa0504700 | Msa0909810 | 0.812585 | 3.936479e-51 | -8.615850e-47 |
| Msa0504700 | Msa0924690 | -0.842401 | 2.645134e-58 | -8.615850e-47 |
| Msa0504700 | Msa0931550 | -0.832826 | 7.574874e-56 | -8.615850e-47 |
| Msa0504700 | Msa0947550 | -0.806990 | 6.288990e-50 | -8.615850e-47 |
| Msa0504700 | Msa0963800 | -0.837807 | 4.180792e-57 | -8.615850e-47 |
| Msa0504700 | Msa0967900 | -0.814305 | 1.648164e-51 | -8.615850e-47 |
| Msa0504700 | Msa0969380 | 0.833728 | 4.514370e-56 | -8.615850e-47 |
| Msa0504700 | Msa0969590 | 0.817853 | 2.658621e-52 | -8.615850e-47 |
| Msa0504700 | Msa0969720 | 0.825653 | 4.168618e-54 | -8.615850e-47 |
| Msa0504700 | Msa0975950 | 0.817887 | 2.611531e-52 | -8.615850e-47 |
| Msa0504700 | Msa0975960 | 0.848872 | 4.645960e-60 | -8.615850e-47 |
| Msa0504700 | Msa1004300 | -0.817263 | 3.610024e-52 | -8.615850e-47 |
| Msa0504700 | Msa1028660 | 0.804895 | 1.734263e-49 | -8.615850e-47 |
| Msa0504700 | Msa1041250 | 0.804506 | 2.090556e-49 | -8.615850e-47 |
| Msa0504700 | Msa1055520 | -0.808902 | 2.464549e-50 | -8.615850e-47 |
| Msa0504700 | Msa1057940 | -0.805806 | 1.117446e-49 | -8.615850e-47 |
| Msa0504700 | Msa1071230 | 0.802354 | 5.837997e-49 | -8.615850e-47 |
| Msa0504700 | Msa1078760 | -0.800676 | 1.289081e-48 | -8.615850e-47 |
| Msa0504700 | Msa1088000 | -0.829945 | 3.874454e-55 | -8.615850e-47 |
| Msa0504700 | Msa1112210 | -0.801748 | 7.779470e-49 | -8.615850e-47 |
| Msa0504700 | Msa1117770 | -0.809730 | 1.637969e-50 | -8.615850e-47 |
| Msa0504700 | Msa1121720 | -0.824022 | 1.010678e-53 | -8.615850e-47 |
| Msa0504700 | Msa1129120 | -0.821095 | 4.843943e-53 | -8.615850e-47 |
| Msa0504700 | Msa1134430 | -0.810354 | 1.201898e-50 | -8.615850e-47 |
| Msa0504700 | Msa1156120 | -0.809261 | 2.064937e-50 | -8.615850e-47 |
| Msa0504700 | Msa1157200 | 0.826691 | 2.361299e-54 | -8.615850e-47 |
| Msa0504700 | Msa1171510 | 0.925435 | 1.841773e-90 | -8.615850e-47 |
| Msa0504700 | Msa1173150 | 0.838906 | 2.177194e-57 | -8.615850e-47 |
| Msa0504700 | Msa1174340 | 0.828418 | 9.088651e-55 | -8.615850e-47 |
| Msa0504700 | Msa1181370 | -0.813555 | 2.412256e-51 | -8.615850e-47 |
| Msa0504700 | Msa1193910 | 0.829777 | 4.256324e-55 | -8.615850e-47 |
| Msa0504700 | Msa1199540 | -0.800866 | 1.178856e-48 | -8.615850e-47 |
| Msa0504700 | Msa1199870 | 0.804612 | 1.987067e-49 | -8.615850e-47 |
| Msa0504700 | Msa1202470 | 0.841508 | 4.553814e-58 | -8.615850e-47 |
| Msa0504700 | Msa1202710 | -0.803108 | 4.080002e-49 | -8.615850e-47 |
| Msa0504700 | Msa1205270 | -0.805135 | 1.545201e-49 | -8.615850e-47 |
| Msa0504700 | Msa1211600 | 0.800221 | 1.595574e-48 | -8.615850e-47 |
| Msa0504700 | Msa1217950 | 0.819921 | 9.008724e-53 | -8.615850e-47 |
| Msa0504700 | Msa1236190 | -0.811694 | 6.159506e-51 | -8.615850e-47 |
| Msa0504700 | Msa1249600 | 0.837421 | 5.251030e-57 | -8.615850e-47 |
| Msa0504700 | Msa1254910 | 0.815132 | 1.081136e-51 | -8.615850e-47 |
| Msa0504700 | Msa1273620 | -0.812403 | 4.314355e-51 | -8.615850e-47 |
| Msa0504700 | Msa1276400 | 0.818931 | 1.514911e-52 | -8.615850e-47 |
| Msa0504700 | Msa1290900 | 0.801061 | 1.075398e-48 | -8.615850e-47 |
| Msa0504700 | Msa1300370 | -0.800681 | 1.286034e-48 | -8.615850e-47 |
| Msa0504700 | Msa1304790 | 0.812812 | 3.511779e-51 | -8.615850e-47 |
| Msa0504700 | Msa1311600 | -0.803670 | 3.119966e-49 | -8.615850e-47 |
| Msa0504700 | Msa1322180 | 0.802705 | 4.942158e-49 | -8.615850e-47 |
| Msa0504700 | Msa1326180 | 0.856733 | 2.635014e-62 | -8.615850e-47 |
| Msa0504700 | Msa1326780 | -0.811158 | 8.052016e-51 | -8.615850e-47 |
| Msa0504700 | Msa1330400 | 0.809682 | 1.677445e-50 | -8.615850e-47 |
| Msa0504700 | Msa1342360 | -0.817819 | 2.706081e-52 | -8.615850e-47 |
| Msa0504700 | Msa1344930 | 0.812006 | 5.266625e-51 | -8.615850e-47 |
| Msa0504700 | Msa1348860 | -0.812085 | 5.063222e-51 | -8.615850e-47 |
| Msa0504700 | Msa1356100 | -0.824933 | 6.170240e-54 | -8.615850e-47 |
| Msa0504700 | Msa1357990 | 0.806341 | 8.621688e-50 | -8.615850e-47 |
| Msa0504700 | Msa1361040 | 0.832694 | 8.168560e-56 | -8.615850e-47 |
| Msa0504700 | Msa1363310 | -0.804801 | 1.814574e-49 | -8.615850e-47 |
| Msa0504700 | Msa1367460 | 0.802707 | 4.936425e-49 | -8.615850e-47 |
| Msa0504700 | Msa1368400 | 0.835043 | 2.111243e-56 | -8.615850e-47 |
| Msa0504700 | Msa1371540 | -0.803207 | 3.891092e-49 | -8.615850e-47 |
| Msa0504700 | Msa1372470 | -0.800750 | 1.244851e-48 | -8.615850e-47 |
| Msa0504700 | Msa1373310 | -0.800632 | 1.315504e-48 | -8.615850e-47 |
| Msa0504700 | Msa1375980 | -0.805135 | 1.545201e-49 | -8.615850e-47 |
| Msa0504700 | Msa1377980 | -0.835680 | 1.457392e-56 | -8.615850e-47 |
| Msa0504700 | Msa1380180 | -0.822481 | 2.314341e-53 | -8.615850e-47 |
| Msa0504700 | Msa1382100 | -0.807238 | 5.572458e-50 | -8.615850e-47 |
| Msa0504700 | Msa1384410 | -0.826247 | 3.012595e-54 | -8.615850e-47 |
| Msa0504700 | Msa1386580 | -0.804769 | 1.842263e-49 | -8.615850e-47 |
| Msa0504700 | Msa1388720 | -0.821429 | 4.056905e-53 | -8.615850e-47 |
| Msa0504700 | Msa1398450 | -0.835204 | 1.922791e-56 | -8.615850e-47 |
| Msa0504700 | Msa1401550 | 0.816665 | 4.918911e-52 | -8.615850e-47 |
| Msa0504700 | Msa1402300 | 0.827526 | 1.490390e-54 | -8.615850e-47 |
| Msa0504700 | Msa1408280 | -0.833012 | 6.808292e-56 | -8.615850e-47 |
| Msa0504700 | Msa1408860 | -0.826110 | 3.246312e-54 | -8.615850e-47 |
| Msa0504700 | Msa1411370 | 0.817314 | 3.517123e-52 | -8.615850e-47 |
| Msa0504700 | Msa1412410 | 0.844357 | 7.947870e-59 | -8.615850e-47 |
| Msa0504700 | Msa1413150 | 0.807957 | 3.920827e-50 | -8.615850e-47 |
| Msa0504700 | Msa1414780 | -0.825354 | 4.907707e-54 | -8.615850e-47 |
| Msa0504700 | Msa1427860 | 0.846350 | 2.295538e-59 | -8.615850e-47 |
| Msa0504700 | Msa1429470 | 0.811078 | 8.381761e-51 | -8.615850e-47 |
| Msa0504700 | Msa1432730 | -0.806633 | 7.483722e-50 | -8.615850e-47 |
| Msa0504700 | Msa1439860 | 0.819141 | 1.356985e-52 | -8.615850e-47 |
| Msa0504700 | Msa1453430 | 0.817145 | 3.838293e-52 | -8.615850e-47 |
| Msa0504700 | Msa1456180 | -0.814341 | 1.618542e-51 | -8.615850e-47 |
| Msa0504700 | Msa1459130 | -0.805106 | 1.566923e-49 | -8.615850e-47 |
| Msa0504700 | Msa1462640 | 0.834449 | 2.978690e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504700 | MtrunA17_Chr3g0105311 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1223 |
| Msa0504700 | MtrunA17_Chr5g0430381 | 86.177 | 586 | 79 | 2 | 1 | 586 | 1 | 584 | 0.0 | 1059 |
| Msa0504700 | MtrunA17_Chr3g0123991 | 75.714 | 560 | 135 | 1 | 1 | 560 | 1 | 559 | 0.0 | 916 |
| Msa0504700 | MtrunA17_Chr5g0429171 | 56.481 | 108 | 40 | 2 | 479 | 586 | 5 | 105 | 4.62e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504700 | AT3G47340.1 | 82.283 | 587 | 100 | 3 | 1 | 586 | 1 | 584 | 0.0 | 1025 |
| Msa0504700 | AT5G10240.1 | 79.279 | 555 | 114 | 1 | 1 | 555 | 1 | 554 | 0.0 | 949 |
| Msa0504700 | AT5G65010.1 | 78.766 | 551 | 116 | 1 | 1 | 551 | 1 | 550 | 0.0 | 940 |
| Msa0504700 | AT5G10240.2 | 78.739 | 555 | 116 | 2 | 1 | 555 | 1 | 553 | 0.0 | 937 |
| Msa0504700 | AT5G65010.2 | 78.804 | 552 | 115 | 2 | 1 | 551 | 1 | 551 | 0.0 | 937 |
| Msa0504700 | AT3G47340.2 | 84.872 | 509 | 76 | 1 | 1 | 509 | 1 | 508 | 0.0 | 929 |
| Msa0504700 | AT3G47340.3 | 84.689 | 418 | 63 | 1 | 1 | 418 | 1 | 417 | 0.0 | 766 |
| Msa0504700 | AT3G47340.4 | 84.158 | 303 | 47 | 1 | 116 | 418 | 1 | 302 | 0.0 | 550 |
Find 146 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTATGATATTGTAATT+TGG | 0.201699 | 3_4:-49608424 | Msa0504700:three_prime_UTR |
| CCATGCGTATGTTGATTTAT+TGG | 0.205283 | 3_4:+49609815 | None:intergenic |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3_4:+49610002 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3_4:-49610794 | Msa0504700:intron |
| AATAATATTCTGGCTTTATT+AGG | 0.218404 | 3_4:+49608605 | None:intergenic |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3_4:-49611456 | Msa0504700:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3_4:-49610064 | Msa0504700:CDS |
| TCAAGAAAATAGTTTCTATA+AGG | 0.236460 | 3_4:+49613243 | None:intergenic |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3_4:+49609215 | None:intergenic |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3_4:+49608675 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3_4:+49608704 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 3_4:-49612075 | Msa0504700:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3_4:-49612112 | Msa0504700:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3_4:+49609972 | None:intergenic |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3_4:-49608806 | Msa0504700:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3_4:-49608672 | Msa0504700:CDS |
| TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3_4:-49608783 | Msa0504700:CDS |
| TGGTTGGATTGATGGCATTA+AGG | 0.312488 | 3_4:-49609407 | Msa0504700:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.316283 | 3_4:-49611589 | Msa0504700:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3_4:-49611135 | Msa0504700:intron |
| TCGGCAAGGCTAACGGTTCC+TGG | 0.326698 | 3_4:-49608861 | Msa0504700:CDS |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3_4:+49609992 | None:intergenic |
| TGTTGTTAGTACGAGGAGTA+TGG | 0.336456 | 3_4:-49611708 | Msa0504700:intron |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 3_4:-49611077 | Msa0504700:CDS |
| TATGTAGTATAATAATATTC+TGG | 0.351740 | 3_4:+49608595 | None:intergenic |
| CAAGAAAATAGTTTCTATAA+GGG | 0.354766 | 3_4:+49613244 | None:intergenic |
| CCACTTCTCTTCCGGCCTTA+AGG | 0.361914 | 3_4:+49610842 | None:intergenic |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3_4:+49608690 | None:intergenic |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3_4:-49611476 | Msa0504700:intron |
| CATTGATCCTGAGTACAAAA+TGG | 0.374006 | 3_4:-49609736 | Msa0504700:intron |
| CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3_4:-49610987 | Msa0504700:intron |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3_4:-49611923 | Msa0504700:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.383418 | 3_4:-49609415 | Msa0504700:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3_4:-49611579 | Msa0504700:intron |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.391623 | 3_4:-49611023 | Msa0504700:CDS |
| AAAGTCTGCCACTTCTCTTC+CGG | 0.398299 | 3_4:+49610834 | None:intergenic |
| TCACTTCCTTGTACATTGGT+TGG | 0.403117 | 3_4:-49611590 | Msa0504700:CDS |
| CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3_4:-49608768 | Msa0504700:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3_4:+49611863 | None:intergenic |
| CATATGATGTAACCACAATC+AGG | 0.412177 | 3_4:-49610132 | Msa0504700:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3_4:-49610075 | Msa0504700:CDS |
| CTCAAAACAAGAGGATCATA+AGG | 0.417430 | 3_4:+49611309 | None:intergenic |
| TGCAGATTAAAGCTCTTCAT+AGG | 0.424217 | 3_4:-49609854 | Msa0504700:intron |
| TTAGGGTGCACCTGACCTTA+AGG | 0.431886 | 3_4:-49610857 | Msa0504700:intron |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3_4:-49608688 | Msa0504700:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.435604 | 3_4:+49611318 | None:intergenic |
| TGGTGGAGCCCACTCCAATC+TGG | 0.436866 | 3_4:+49612132 | None:intergenic |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3_4:-49610017 | Msa0504700:CDS |
| TCTCTTCCGGCCTTAAGGTC+AGG | 0.447008 | 3_4:+49610847 | None:intergenic |
| GGTGTCACTTCCTTGTACAT+TGG | 0.452637 | 3_4:-49611594 | Msa0504700:CDS |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 3_4:-49613202 | Msa0504700:CDS |
| AAGAAGGTAGAATTGAGAAA+TGG | 0.457528 | 3_4:-49609616 | Msa0504700:CDS |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3_4:+49608644 | None:intergenic |
| TCAAAACAAGAGGATCATAA+GGG | 0.462003 | 3_4:+49611310 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3_4:-49611588 | Msa0504700:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3_4:+49609222 | None:intergenic |
| TAGAGTACCTTAGGTAGGTA+AGG | 0.478173 | 3_4:+49609560 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3_4:-49610085 | Msa0504700:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3_4:-49611834 | Msa0504700:intron |
| TCTACAATCATGAAGACCTT+AGG | 0.489260 | 3_4:-49611895 | Msa0504700:CDS |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.493861 | 3_4:-49611024 | Msa0504700:CDS |
| TGAAGCACCGTGGTCCAGAT+TGG | 0.494451 | 3_4:-49612146 | Msa0504700:CDS |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3_4:-49610074 | Msa0504700:CDS |
| GTTCAGATAAAACATGAAGA+AGG | 0.499536 | 3_4:-49609632 | Msa0504700:intron |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3_4:+49609234 | None:intergenic |
| CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3_4:+49608775 | None:intergenic |
| ATTGTTGCGAGGGATGCTAT+AGG | 0.511574 | 3_4:-49611615 | Msa0504700:CDS |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3_4:-49611374 | Msa0504700:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3_4:-49611455 | Msa0504700:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3_4:-49609423 | Msa0504700:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3_4:-49613174 | Msa0504700:CDS |
| TTTAAAACAAAGACTAGATG+TGG | 0.519468 | 3_4:+49608463 | None:intergenic |
| GGATGGCATAGATGCAATAG+AGG | 0.521917 | 3_4:-49610176 | Msa0504700:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3_4:-49609427 | Msa0504700:CDS |
| GAATTGAGAAATGGATACTT+AGG | 0.529889 | 3_4:-49609607 | Msa0504700:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3_4:+49612063 | None:intergenic |
| GATTAGGCAATTGTTTCCTA+AGG | 0.531169 | 3_4:+49611879 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 3_4:-49612101 | Msa0504700:CDS |
| ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3_4:-49611389 | Msa0504700:CDS |
| CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3_4:-49611388 | Msa0504700:CDS |
| CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3_4:-49611625 | Msa0504700:CDS |
| AGCAGTCACTGCTAGATACC+TGG | 0.543495 | 3_4:-49611050 | Msa0504700:CDS |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3_4:+49610800 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3_4:+49612115 | None:intergenic |
| TTATGTTAAATTTGAATGCA+AGG | 0.545966 | 3_4:-49608378 | Msa0504700:three_prime_UTR |
| CAATAAATCAACATACGCAT+GGG | 0.548801 | 3_4:-49609814 | Msa0504700:CDS |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3_4:-49610058 | Msa0504700:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3_4:-49609439 | Msa0504700:CDS |
| AGGTGTTGCTGCCCTGATTG+TGG | 0.554777 | 3_4:+49610120 | None:intergenic |
| CCAATAAATCAACATACGCA+TGG | 0.555802 | 3_4:-49609815 | Msa0504700:CDS |
| GTAGAACTCGGCAAGGCTAA+CGG | 0.559214 | 3_4:-49608868 | Msa0504700:intron |
| ATTGGATAAAATGTGAAGAG+AGG | 0.559792 | 3_4:+49613298 | None:intergenic |
| CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3_4:+49608768 | None:intergenic |
| AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3_4:-49610995 | Msa0504700:CDS |
| GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3_4:-49609760 | Msa0504700:CDS |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3_4:+49610100 | None:intergenic |
| TGTGAATCTTACCTTCTCAA+AGG | 0.571655 | 3_4:+49611281 | None:intergenic |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3_4:+49611849 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3_4:-49613173 | Msa0504700:CDS |
| AGAGAATCCTTACCTACCTA+AGG | 0.580886 | 3_4:-49609567 | Msa0504700:intron |
| TTTGAGGAACGCCTTTGAGA+AGG | 0.583912 | 3_4:-49611292 | Msa0504700:intron |
| ACCGTGGTCCAGATTGGAGT+GGG | 0.584195 | 3_4:-49612140 | Msa0504700:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3_4:-49609200 | Msa0504700:CDS |
| TCGATTTGTAGAACTCGGCA+AGG | 0.586254 | 3_4:-49608875 | Msa0504700:intron |
| ATTGCCTGCGTGAAAGCTCA+AGG | 0.587570 | 3_4:+49613143 | None:intergenic |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3_4:+49608843 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3_4:-49609433 | Msa0504700:CDS |
| AAAAGAAGGTGCAAAGAGTG+TGG | 0.592927 | 3_4:+49613347 | None:intergenic |
| TGAGAAATGGATACTTAGGA+AGG | 0.593962 | 3_4:-49609603 | Msa0504700:CDS |
| TATAGTCAATAATTGCATAG+AGG | 0.594968 | 3_4:-49608574 | Msa0504700:three_prime_UTR |
| GGTGCACCTGACCTTAAGGC+CGG | 0.595098 | 3_4:-49610853 | Msa0504700:CDS |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3_4:-49611112 | Msa0504700:CDS |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3_4:+49612112 | None:intergenic |
| TAGAGTAGAGTACCTTAGGT+AGG | 0.606905 | 3_4:+49609555 | None:intergenic |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3_4:+49611584 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3_4:-49608817 | Msa0504700:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3_4:-49608818 | Msa0504700:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3_4:+49612045 | None:intergenic |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3_4:-49612031 | Msa0504700:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3_4:+49611370 | None:intergenic |
| CCTTAAGGCCGGAAGAGAAG+TGG | 0.615422 | 3_4:-49610842 | Msa0504700:CDS |
| AGCTAATATGAGACATGGCA+AGG | 0.619874 | 3_4:-49608636 | Msa0504700:exon |
| GTCACTGCTAGATACCTGGC+TGG | 0.621089 | 3_4:-49611046 | Msa0504700:CDS |
| ATATGATGTAACCACAATCA+GGG | 0.627367 | 3_4:-49610131 | Msa0504700:CDS |
| AAGGCGTTCCTCAAAACAAG+AGG | 0.630369 | 3_4:+49611300 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.631779 | 3_4:-49612126 | Msa0504700:CDS |
| ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3_4:-49611626 | Msa0504700:CDS |
| CACCGTGGTCCAGATTGGAG+TGG | 0.641426 | 3_4:-49612141 | Msa0504700:CDS |
| TTCAAAGCTAATATGAGACA+TGG | 0.641602 | 3_4:-49608641 | Msa0504700:exon |
| TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3_4:+49611396 | None:intergenic |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3_4:+49611097 | None:intergenic |
| CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3_4:+49611399 | None:intergenic |
| GCCCACTCCAATCTGGACCA+CGG | 0.649014 | 3_4:+49612139 | None:intergenic |
| CAATCCTCCGTGGTTCAATG+AGG | 0.649428 | 3_4:-49611349 | Msa0504700:CDS |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3_4:-49609975 | Msa0504700:intron |
| CAAAACAAGAGGATCATAAG+GGG | 0.657549 | 3_4:+49611311 | None:intergenic |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 3_4:+49612074 | None:intergenic |
| GCATCCTTGAGCTTTCACGC+AGG | 0.684135 | 3_4:-49613147 | Msa0504700:intron |
| ATCTTGATCATCACAATGTG+TGG | 0.687978 | 3_4:-49613220 | Msa0504700:exon |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.694915 | 3_4:-49611022 | Msa0504700:CDS |
| GTAGATGGTACAATCCTCCG+TGG | 0.707926 | 3_4:-49611359 | Msa0504700:CDS |
| AATAAATCAACATACGCATG+GGG | 0.713947 | 3_4:-49609813 | Msa0504700:CDS |
| GCAAGGCTAACGGTTCCTGG+AGG | 0.715059 | 3_4:-49608858 | Msa0504700:CDS |
| ATAACAGCCTCATTGAACCA+CGG | 0.715208 | 3_4:+49611342 | None:intergenic |
| ACAGCCTCATTGAACCACGG+AGG | 0.790372 | 3_4:+49611345 | None:intergenic |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3_4:-49612156 | Msa0504700:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3_4:49609146-49609165 | None:intergenic | 10.0% |
| !! | ATATAATTATCCATTTATAT+TGG | - | chr3_4:49609180-49609199 | Msa0504700:intron | 10.0% |
| !! | TATAATTATCCATTTATATT+GGG | - | chr3_4:49609181-49609200 | Msa0504700:intron | 10.0% |
| !! | TACTTATTAATTATTCTAAT+TGG | + | chr3_4:49609499-49609518 | None:intergenic | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3_4:49609803-49609822 | Msa0504700:CDS | 10.0% |
| !!! | ATTCTTTATTAAATATTTTG+TGG | - | chr3_4:49611526-49611545 | Msa0504700:intron | 10.0% |
| !! | TAGAAAAATAAAAAAACTCT+AGG | + | chr3_4:49608763-49608782 | None:intergenic | 15.0% |
| !!! | AAAATATTTTGGTTTTAAGA+GGG | - | chr3_4:49608909-49608928 | Msa0504700:intron | 15.0% |
| !! | AATACTAATTAATACACATA+TGG | - | chr3_4:49608962-49608981 | Msa0504700:intron | 15.0% |
| !! | CATATGGATATAATATAATA+TGG | - | chr3_4:49608978-49608997 | Msa0504700:intron | 15.0% |
| !!! | TGGTTTTTTATTTTTTTCAA+TGG | + | chr3_4:49609122-49609141 | None:intergenic | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3_4:49609440-49609459 | Msa0504700:CDS | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3_4:49609441-49609460 | Msa0504700:CDS | 15.0% |
| !! | GAATAATTAATAAGTAACTT+TGG | - | chr3_4:49609503-49609522 | Msa0504700:intron | 15.0% |
| !! | TACTATATAGTATAATAAAG+TGG | - | chr3_4:49609770-49609789 | Msa0504700:CDS | 15.0% |
| !! | GGATTATTAAAAAAATTCAA+TGG | - | chr3_4:49610793-49610812 | Msa0504700:intron | 15.0% |
| !! | GAAAAAAAAACATTCATTTA+AGG | - | chr3_4:49610815-49610834 | Msa0504700:CDS | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3_4:49610845-49610864 | Msa0504700:CDS | 15.0% |
| !! | GAATAAAAACACTTAATAAA+AGG | + | chr3_4:49612076-49612095 | None:intergenic | 15.0% |
| !! | TATGTAGTATAATAATATTC+TGG | + | chr3_4:49613141-49613160 | None:intergenic | 15.0% |
| !! | CAAGAAAATAGTTTCTATAA+GGG | + | chr3_4:49608492-49608511 | None:intergenic | 20.0% |
| !! | TCAAGAAAATAGTTTCTATA+AGG | + | chr3_4:49608493-49608512 | None:intergenic | 20.0% |
| !!! | CTTTTATATAAATACCCTTT+TGG | - | chr3_4:49608666-49608685 | Msa0504700:CDS | 20.0% |
| !! | AATATCAAAGTTAACCAAAA+GGG | + | chr3_4:49608683-49608702 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCAAA+AGG | + | chr3_4:49608684-49608703 | None:intergenic | 20.0% |
| !!! | GAGTTTTTATTATATTGATG+AGG | - | chr3_4:49608864-49608883 | Msa0504700:CDS | 20.0% |
| !!! | AATGGAAGTTCAAAATATTT+TGG | - | chr3_4:49608898-49608917 | Msa0504700:intron | 20.0% |
| !!! | CAAAATATTTTGGTTTTAAG+AGG | - | chr3_4:49608908-49608927 | Msa0504700:intron | 20.0% |
| !!! | TTTTTTCAATGGCAAAATAT+TGG | + | chr3_4:49609111-49609130 | None:intergenic | 20.0% |
| !!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3_4:49609142-49609161 | None:intergenic | 20.0% |
| !! | AATAAACAAAAGTAAGACAT+GGG | - | chr3_4:49609322-49609341 | Msa0504700:intron | 20.0% |
| !!! | TGTTATTTTGATGCAATAAT+TGG | - | chr3_4:49609352-49609371 | Msa0504700:intron | 20.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr3_4:49609429-49609448 | None:intergenic | 20.0% |
| !! | CAAACTATAGAATATTACTA+GGG | + | chr3_4:49609738-49609757 | None:intergenic | 20.0% |
| !! | ACAAACTATAGAATATTACT+AGG | + | chr3_4:49609739-49609758 | None:intergenic | 20.0% |
| !!! | TTATTTAAAACATTATGTCG+CGG | - | chr3_4:49609944-49609963 | Msa0504700:intron | 20.0% |
| !! | GTAACATTCATGTAAATAAA+AGG | + | chr3_4:49609989-49610008 | None:intergenic | 20.0% |
| !!! | CAATTCTTACATTTTTAAGT+CGG | - | chr3_4:49610525-49610544 | Msa0504700:intron | 20.0% |
| !!! | GAATGAAAAATCAATTTTAG+TGG | - | chr3_4:49610772-49610791 | Msa0504700:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr3_4:49610858-49610877 | Msa0504700:intron | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr3_4:49610859-49610878 | Msa0504700:intron | 20.0% |
| !!! | ACATTTTTTATGATACCATA+GGG | - | chr3_4:49611488-49611507 | Msa0504700:intron | 20.0% |
| !!! | TTCTTGAAATTTTTTCGTAT+AGG | - | chr3_4:49612438-49612457 | Msa0504700:intron | 20.0% |
| !! | AAATAGCTGAAAATAGTTTA+TGG | + | chr3_4:49612671-49612690 | None:intergenic | 20.0% |
| !!! | AATAATATTCTGGCTTTATT+AGG | + | chr3_4:49613131-49613150 | None:intergenic | 20.0% |
| !! | AACACTATGATATTGTAATT+TGG | - | chr3_4:49613309-49613328 | Msa0504700:five_prime_UTR | 20.0% |
| !! | TTATGTTAAATTTGAATGCA+AGG | - | chr3_4:49613355-49613374 | Msa0504700:five_prime_UTR | 20.0% |
| ! | AGAGAAAGAAAAAAAAGGAT+TGG | + | chr3_4:49608456-49608475 | None:intergenic | 25.0% |
| ! | TGAAGAGAGAAAGAAAAAAA+AGG | + | chr3_4:49608461-49608480 | None:intergenic | 25.0% |
| ! | GATAAGTGATATACAACTAA+AGG | - | chr3_4:49609026-49609045 | Msa0504700:intron | 25.0% |
| ! | TACTAGAAAAATCACCAAAA+TGG | - | chr3_4:49609050-49609069 | Msa0504700:intron | 25.0% |
| ! | GAATAAACAAAAGTAAGACA+TGG | - | chr3_4:49609321-49609340 | Msa0504700:intron | 25.0% |
| ! | ATAAACAAAAGTAAGACATG+GGG | - | chr3_4:49609323-49609342 | Msa0504700:intron | 25.0% |
| ! | TATTGCATCAAAATAACATG+TGG | + | chr3_4:49609350-49609369 | None:intergenic | 25.0% |
| !! | TTTTGATGCAATAATTGGTT+CGG | - | chr3_4:49609357-49609376 | Msa0504700:intron | 25.0% |
| !!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3_4:49609390-49609409 | None:intergenic | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr3_4:49609414-49609433 | Msa0504700:CDS | 25.0% |
| ! | TTGGACTTTATGTATATGAA+CGG | + | chr3_4:49609480-49609499 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3_4:49609702-49609721 | Msa0504700:intron | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3_4:49609810-49609829 | Msa0504700:CDS | 25.0% |
| !!! | TACATGAATGTTACTGATTT+TGG | - | chr3_4:49609995-49610014 | Msa0504700:CDS | 25.0% |
| !! | TATCTTTTCATTTGTTCTGT+TGG | - | chr3_4:49610075-49610094 | Msa0504700:CDS | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3_4:49610227-49610246 | Msa0504700:intron | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr3_4:49610936-49610955 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr3_4:49610939-49610958 | Msa0504700:intron | 25.0% |
| ! | TAGACAAATACTATTTGAAG+TGG | + | chr3_4:49611364-49611383 | None:intergenic | 25.0% |
| !!! | CACATTTTTTATGATACCAT+AGG | - | chr3_4:49611487-49611506 | Msa0504700:intron | 25.0% |
| !!! | CATTTTTTATGATACCATAG+GGG | - | chr3_4:49611489-49611508 | Msa0504700:intron | 25.0% |
| ! | TTTGAAGGAAAAAAATGAAG+TGG | - | chr3_4:49611808-49611827 | Msa0504700:intron | 25.0% |
| ! | TGAAACTGAAAAGAAAATGT+TGG | + | chr3_4:49612381-49612400 | None:intergenic | 25.0% |
| !!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3_4:49612397-49612416 | Msa0504700:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr3_4:49612521-49612540 | None:intergenic | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3_4:49612829-49612848 | None:intergenic | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | + | chr3_4:49613061-49613080 | None:intergenic | 25.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | - | chr3_4:49613061-49613080 | Msa0504700:intron | 25.0% |
| ! | TATAGTCAATAATTGCATAG+AGG | - | chr3_4:49613159-49613178 | Msa0504700:CDS | 25.0% |
| !! | TTTAAAACAAAGACTAGATG+TGG | + | chr3_4:49613273-49613292 | None:intergenic | 25.0% |
| !!! | GTCTTTGTTTTAAATTGATG+TGG | - | chr3_4:49613279-49613298 | Msa0504700:five_prime_UTR | 25.0% |
| ATTGGATAAAATGTGAAGAG+AGG | + | chr3_4:49608438-49608457 | None:intergenic | 30.0% | |
| GGTAAAAAAGAGTTTGATCA+TGG | + | chr3_4:49608742-49608761 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGTTTACAAGCTCA+TGG | - | chr3_4:49608783-49608802 | Msa0504700:CDS | 30.0% |
| ! | TTTAAGGTTTACAAGCTCAT+GGG | - | chr3_4:49608784-49608803 | Msa0504700:CDS | 30.0% |
| TAGAAAAATCACCAAAATGG+TGG | - | chr3_4:49609053-49609072 | Msa0504700:intron | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3_4:49609208-49609227 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3_4:49609209-49609228 | None:intergenic | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | - | chr3_4:49609255-49609274 | Msa0504700:CDS | 30.0% | |
| AACATACTTGACTTTGACAA+GGG | - | chr3_4:49609256-49609275 | Msa0504700:CDS | 30.0% | |
| !!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3_4:49609391-49609410 | None:intergenic | 30.0% |
| TGGACTTTATGTATATGAAC+GGG | + | chr3_4:49609479-49609498 | None:intergenic | 30.0% | |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3_4:49609632-49609651 | Msa0504700:intron | 30.0% |
| CTACATAAAGATTACTAACC+AGG | + | chr3_4:49609920-49609939 | None:intergenic | 30.0% | |
| !!! | TCATTTTTGTTGTTAGTACG+AGG | - | chr3_4:49610018-49610037 | Msa0504700:CDS | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3_4:49610257-49610276 | Msa0504700:intron | 30.0% |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3_4:49610277-49610296 | Msa0504700:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3_4:49610278-49610297 | Msa0504700:intron | 30.0% | |
| TCAAAACAAGAGGATCATAA+GGG | + | chr3_4:49610426-49610445 | None:intergenic | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3_4:49610738-49610757 | Msa0504700:intron | 30.0% | |
| TCAAAATTGCGAAAAGATGT+GGG | - | chr3_4:49610994-49611013 | Msa0504700:CDS | 30.0% | |
| CATCAAAAACATTGATGTCA+TGG | - | chr3_4:49611318-49611337 | Msa0504700:CDS | 30.0% | |
| ! | TTGATGTCATGGTCTTAATT+TGG | - | chr3_4:49611329-49611348 | Msa0504700:CDS | 30.0% |
| ! | AAATATTTTGTGGTCTATGC+AGG | - | chr3_4:49611536-49611555 | Msa0504700:intron | 30.0% |
| ATATGATGTAACCACAATCA+GGG | - | chr3_4:49611602-49611621 | Msa0504700:CDS | 30.0% | |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3_4:49611716-49611735 | Msa0504700:intron | 30.0% |
| ! | AATGTAGTTCTATTACCTTG+CGG | + | chr3_4:49611776-49611795 | None:intergenic | 30.0% |
| CAATAAATCAACATACGCAT+GGG | - | chr3_4:49611919-49611938 | Msa0504700:intron | 30.0% | |
| AATAAATCAACATACGCATG+GGG | - | chr3_4:49611920-49611939 | Msa0504700:intron | 30.0% | |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3_4:49611962-49611981 | None:intergenic | 30.0% | |
| ! | TATCATACCATTTTGTACTC+AGG | + | chr3_4:49612007-49612026 | None:intergenic | 30.0% |
| GTTCAGATAAAACATGAAGA+AGG | - | chr3_4:49612101-49612120 | Msa0504700:CDS | 30.0% | |
| AAGAAGGTAGAATTGAGAAA+TGG | - | chr3_4:49612117-49612136 | Msa0504700:CDS | 30.0% | |
| GAATTGAGAAATGGATACTT+AGG | - | chr3_4:49612126-49612145 | Msa0504700:CDS | 30.0% | |
| CAGATAGAAATTGTAGCAAA+TGG | + | chr3_4:49612209-49612228 | None:intergenic | 30.0% | |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr3_4:49612271-49612290 | Msa0504700:intron | 30.0% |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3_4:49612514-49612533 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr3_4:49612533-49612552 | Msa0504700:intron | 30.0% | |
| CGATTGATTAAATTACCTGA+GGG | + | chr3_4:49612564-49612583 | None:intergenic | 30.0% | |
| TCGATTGATTAAATTACCTG+AGG | + | chr3_4:49612565-49612584 | None:intergenic | 30.0% | |
| AAACGTTTGTCAAACTGTTT+CGG | - | chr3_4:49612616-49612635 | Msa0504700:intron | 30.0% | |
| ATAGTTTATGGACATGTCAT+AGG | + | chr3_4:49612659-49612678 | None:intergenic | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3_4:49613046-49613065 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3_4:49613045-49613064 | Msa0504700:intron | 30.0% | |
| !! | TGTCTCATATTAGCTTTGAA+TGG | + | chr3_4:49613092-49613111 | None:intergenic | 30.0% |
| TTCAAAGCTAATATGAGACA+TGG | - | chr3_4:49613092-49613111 | Msa0504700:intron | 30.0% | |
| AGAAGAAGACACGAAAAAGA+AGG | + | chr3_4:49608403-49608422 | None:intergenic | 35.0% | |
| ATCTTGATCATCACAATGTG+TGG | - | chr3_4:49608513-49608532 | Msa0504700:three_prime_UTR | 35.0% | |
| AGTGGTTGAGATTGATATCA+AGG | - | chr3_4:49608807-49608826 | Msa0504700:CDS | 35.0% | |
| GATGAGGAAGAATGAAAGAA+TGG | - | chr3_4:49608880-49608899 | Msa0504700:intron | 35.0% | |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3_4:49609207-49609226 | None:intergenic | 35.0% |
| CTTGTAACTACGAGTAGTTT+AGG | - | chr3_4:49609230-49609249 | Msa0504700:CDS | 35.0% | |
| ACATACTTGACTTTGACAAG+GGG | - | chr3_4:49609257-49609276 | Msa0504700:CDS | 35.0% | |
| AATAGTTATCACCATGTTGG+TGG | + | chr3_4:49609621-49609640 | None:intergenic | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3_4:49609624-49609643 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3_4:49609621-49609640 | Msa0504700:CDS | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3_4:49609691-49609710 | None:intergenic | 35.0% | |
| TCTACAATCATGAAGACCTT+AGG | - | chr3_4:49609838-49609857 | Msa0504700:CDS | 35.0% | |
| GATTAGGCAATTGTTTCCTA+AGG | + | chr3_4:49609857-49609876 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3_4:49609873-49609892 | None:intergenic | 35.0% | |
| AAAACATTATGTCGCGGTTT+AGG | - | chr3_4:49609950-49609969 | Msa0504700:intron | 35.0% | |
| ! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3_4:49610039-49610058 | Msa0504700:CDS | 35.0% |
| ! | AGAAAATTTTGTGGACATGC+TGG | - | chr3_4:49610048-49610067 | Msa0504700:CDS | 35.0% |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3_4:49610247-49610266 | Msa0504700:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3_4:49610319-49610338 | Msa0504700:intron | 35.0% |
| CAAAACAAGAGGATCATAAG+GGG | + | chr3_4:49610425-49610444 | None:intergenic | 35.0% | |
| CTCAAAACAAGAGGATCATA+AGG | + | chr3_4:49610427-49610446 | None:intergenic | 35.0% | |
| !!! | CTTATGATCCTCTTGTTTTG+AGG | - | chr3_4:49610425-49610444 | Msa0504700:intron | 35.0% |
| TGTGAATCTTACCTTCTCAA+AGG | + | chr3_4:49610455-49610474 | None:intergenic | 35.0% | |
| CGATTGATGTGTTTGATTAC+AGG | - | chr3_4:49610584-49610603 | Msa0504700:intron | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr3_4:49610598-49610617 | Msa0504700:intron | 35.0% | |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3_4:49610644-49610663 | Msa0504700:intron | 35.0% |
| CTCAAAATTGCGAAAAGATG+TGG | - | chr3_4:49610993-49611012 | Msa0504700:CDS | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr3_4:49611394-49611413 | Msa0504700:CDS | 35.0% | |
| CATAATATTGTTTGCCCCTA+TGG | + | chr3_4:49611506-49611525 | None:intergenic | 35.0% | |
| CATATGATGTAACCACAATC+AGG | - | chr3_4:49611601-49611620 | Msa0504700:CDS | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr3_4:49611636-49611655 | None:intergenic | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr3_4:49611648-49611667 | Msa0504700:CDS | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3_4:49611658-49611677 | Msa0504700:CDS | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3_4:49611659-49611678 | Msa0504700:CDS | 35.0% | |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr3_4:49611693-49611712 | Msa0504700:CDS | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr3_4:49611697-49611716 | Msa0504700:CDS | 35.0% |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3_4:49611744-49611763 | None:intergenic | 35.0% | |
| TGCAGATTAAAGCTCTTCAT+AGG | - | chr3_4:49611879-49611898 | Msa0504700:CDS | 35.0% | |
| !! | CCATGCGTATGTTGATTTAT+TGG | + | chr3_4:49611921-49611940 | None:intergenic | 35.0% |
| CCAATAAATCAACATACGCA+TGG | - | chr3_4:49611918-49611937 | Msa0504700:intron | 35.0% | |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3_4:49611946-49611965 | Msa0504700:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3_4:49611952-49611971 | Msa0504700:intron | 35.0% |
| GGATTTCATCAAAGTTGCAA+TGG | - | chr3_4:49611973-49611992 | Msa0504700:intron | 35.0% | |
| CATTGATCCTGAGTACAAAA+TGG | - | chr3_4:49611997-49612016 | Msa0504700:intron | 35.0% | |
| TGAGAAATGGATACTTAGGA+AGG | - | chr3_4:49612130-49612149 | Msa0504700:CDS | 35.0% | |
| ! | AAAGTAGAGTAGAGTACCTT+AGG | + | chr3_4:49612185-49612204 | None:intergenic | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr3_4:49612278-49612297 | Msa0504700:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3_4:49612353-49612372 | None:intergenic | 35.0% |
| TCCGAACAGAACCTTAATAA+AGG | - | chr3_4:49612815-49612834 | Msa0504700:intron | 35.0% | |
| GCCTTTATTAAGGTTCTGTT+CGG | + | chr3_4:49612819-49612838 | None:intergenic | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr3_4:49612841-49612860 | None:intergenic | 35.0% | |
| ! | AAAAGAAGGTGCAAAGAGTG+TGG | + | chr3_4:49608389-49608408 | None:intergenic | 40.0% |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr3_4:49608531-49608550 | Msa0504700:three_prime_UTR | 40.0% |
| TGATGACTCACAAGCTAAGA+GGG | - | chr3_4:49608560-49608579 | Msa0504700:three_prime_UTR | 40.0% | |
| ! | ATCACTAAGCACCACCATTT+TGG | + | chr3_4:49609067-49609086 | None:intergenic | 40.0% |
| CATCACAGTCACATTGTGTA+CGG | + | chr3_4:49609887-49609906 | None:intergenic | 40.0% | |
| TGTTGTTAGTACGAGGAGTA+TGG | - | chr3_4:49610025-49610044 | Msa0504700:CDS | 40.0% | |
| ! | AATTTTGTGGACATGCTGGA+TGG | - | chr3_4:49610052-49610071 | Msa0504700:CDS | 40.0% |
| ACAACAGTTTCATTGTTGCG+AGG | - | chr3_4:49610107-49610126 | Msa0504700:CDS | 40.0% | |
| CAACAGTTTCATTGTTGCGA+GGG | - | chr3_4:49610108-49610127 | Msa0504700:CDS | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3_4:49610143-49610162 | Msa0504700:CDS | 40.0% | |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3_4:49610144-49610163 | Msa0504700:CDS | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3_4:49610145-49610164 | Msa0504700:CDS | 40.0% |
| ATAACAGCCTCATTGAACCA+CGG | + | chr3_4:49610394-49610413 | None:intergenic | 40.0% | |
| AAACACGTTGACCAGAGATA+CGG | - | chr3_4:49610474-49610493 | Msa0504700:intron | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3_4:49610639-49610658 | None:intergenic | 40.0% | |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3_4:49610639-49610658 | Msa0504700:intron | 40.0% |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr3_4:49610656-49610675 | Msa0504700:intron | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr3_4:49610710-49610729 | Msa0504700:intron | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr3_4:49610711-49610730 | Msa0504700:intron | 40.0% | |
| CTCATTCTGTGTAGGACTTA+AGG | - | chr3_4:49610746-49610765 | Msa0504700:intron | 40.0% | |
| ! | AGAGAAGTGGCAGACTTTTT+AGG | - | chr3_4:49610904-49610923 | Msa0504700:intron | 40.0% |
| CGAAAAGATGTGGGCAAATA+GGG | - | chr3_4:49611003-49611022 | Msa0504700:CDS | 40.0% | |
| TTATGTCGCAGTCTTTACTG+TGG | - | chr3_4:49611069-49611088 | Msa0504700:CDS | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr3_4:49611180-49611199 | Msa0504700:intron | 40.0% | |
| CAAATTCTGATGTGACACCA+AGG | + | chr3_4:49611200-49611219 | None:intergenic | 40.0% | |
| CTCAAAATTGCGAAGAGTTG+CGG | - | chr3_4:49611253-49611272 | Msa0504700:intron | 40.0% | |
| ! | CAAAGTCGCATCAGTGTTTT+AGG | + | chr3_4:49611280-49611299 | None:intergenic | 40.0% |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3_4:49611393-49611412 | Msa0504700:CDS | 40.0% | |
| AGAAGTCACAGTCTAGATTG+TGG | - | chr3_4:49611461-49611480 | Msa0504700:CDS | 40.0% | |
| ! | ATTTTGTGGTCTATGCAGGA+TGG | - | chr3_4:49611540-49611559 | Msa0504700:intron | 40.0% |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3_4:49611675-49611694 | Msa0504700:CDS | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr3_4:49611696-49611715 | Msa0504700:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3_4:49611734-49611753 | None:intergenic | 40.0% |
| ATTACATCGCTCGTGTTTGA+AGG | - | chr3_4:49611793-49611812 | Msa0504700:intron | 40.0% | |
| AGAGAATCCTTACCTACCTA+AGG | - | chr3_4:49612166-49612185 | Msa0504700:intron | 40.0% | |
| ! | TAGAGTACCTTAGGTAGGTA+AGG | + | chr3_4:49612176-49612195 | None:intergenic | 40.0% |
| ! | TAGAGTAGAGTACCTTAGGT+AGG | + | chr3_4:49612181-49612200 | None:intergenic | 40.0% |
| ! | TGGTTGGATTGATGGCATTA+AGG | - | chr3_4:49612326-49612345 | Msa0504700:intron | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3_4:49612502-49612521 | None:intergenic | 40.0% |
| ACGTTTATGTCATTGTCGCT+TGG | + | chr3_4:49612602-49612621 | None:intergenic | 40.0% | |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3_4:49612916-49612935 | Msa0504700:intron | 40.0% | |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3_4:49613015-49613034 | None:intergenic | 40.0% |
| AGCTAATATGAGACATGGCA+AGG | - | chr3_4:49613097-49613116 | Msa0504700:intron | 40.0% | |
| !!! | GCCTGTTGTGTATTTTTTCG+AGG | - | chr3_4:49613190-49613209 | Msa0504700:CDS | 40.0% |
| GCCTCGAAAAAATACACAAC+AGG | + | chr3_4:49613194-49613213 | None:intergenic | 40.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr3_4:49608559-49608578 | Msa0504700:three_prime_UTR | 45.0% | |
| GCATTGGGGCCCAATATAAA+TGG | + | chr3_4:49609193-49609212 | None:intergenic | 45.0% | |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3_4:49609662-49609681 | None:intergenic | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3_4:49609899-49609918 | Msa0504700:intron | 45.0% | |
| !! | TTATGTCGCGGTTTAGGTTG+CGG | - | chr3_4:49609956-49609975 | Msa0504700:intron | 45.0% |
| ATTGTTGCGAGGGATGCTAT+AGG | - | chr3_4:49610118-49610137 | Msa0504700:CDS | 45.0% | |
| !! | GGTGTCACTTCCTTGTACAT+TGG | - | chr3_4:49610139-49610158 | Msa0504700:CDS | 45.0% |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3_4:49610152-49610171 | None:intergenic | 45.0% | |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3_4:49610154-49610173 | Msa0504700:CDS | 45.0% |
| ACTTGTACTCGAGCAAAGAC+CGG | - | chr3_4:49610344-49610363 | Msa0504700:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3_4:49610366-49610385 | None:intergenic | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3_4:49610418-49610437 | None:intergenic | 45.0% | |
| ! | AAGGCGTTCCTCAAAACAAG+AGG | + | chr3_4:49610436-49610455 | None:intergenic | 45.0% |
| ! | TTTGAGGAACGCCTTTGAGA+AGG | - | chr3_4:49610441-49610460 | Msa0504700:intron | 45.0% |
| ! | CTCTTTTCAGACCGTATCTC+TGG | + | chr3_4:49610488-49610507 | None:intergenic | 45.0% |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3_4:49610621-49610640 | Msa0504700:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3_4:49610636-49610655 | Msa0504700:intron | 45.0% |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr3_4:49610709-49610728 | Msa0504700:intron | 45.0% | |
| ! | AAAGTCTGCCACTTCTCTTC+CGG | + | chr3_4:49610902-49610921 | None:intergenic | 45.0% |
| GCGAAAAGATGTGGGCAAAT+AGG | - | chr3_4:49611002-49611021 | Msa0504700:CDS | 45.0% | |
| GGATGGCATAGATGCAATAG+AGG | - | chr3_4:49611557-49611576 | Msa0504700:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3_4:49611669-49611688 | Msa0504700:CDS | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3_4:49611764-49611783 | None:intergenic | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr3_4:49612294-49612313 | Msa0504700:intron | 45.0% | |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3_4:49612300-49612319 | Msa0504700:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3_4:49612306-49612325 | Msa0504700:intron | 45.0% |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr3_4:49612318-49612337 | Msa0504700:intron | 45.0% | |
| !! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3_4:49612546-49612565 | Msa0504700:intron | 45.0% |
| ! | GCTATTTCCTTAAGCTCTCC+AGG | - | chr3_4:49612684-49612703 | Msa0504700:intron | 45.0% |
| !! | GCTGTTTTCATGAGCTATCC+TGG | + | chr3_4:49612705-49612724 | None:intergenic | 45.0% |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3_4:49612915-49612934 | Msa0504700:intron | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3_4:49612927-49612946 | Msa0504700:intron | 45.0% | |
| TCAAGCAACCTTGATCCTTC+TGG | - | chr3_4:49612950-49612969 | Msa0504700:intron | 45.0% | |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3_4:49613032-49613051 | None:intergenic | 45.0% |
| !!! | TTTTTTATTTTTCTATTTTA+AGG | - | chr3_4:49608768-49608787 | Msa0504700:CDS | 5.0% |
| !!! | ATTTTTAAAAAAATTTAACA+TGG | - | chr3_4:49608842-49608861 | Msa0504700:CDS | 5.0% |
| ATTGCCTGCGTGAAAGCTCA+AGG | + | chr3_4:49608593-49608612 | None:intergenic | 50.0% | |
| GGTTTACAAGCTCATGGGAG+TGG | - | chr3_4:49608789-49608808 | Msa0504700:CDS | 50.0% | |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3_4:49609577-49609596 | Msa0504700:CDS | 50.0% |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3_4:49609658-49609677 | Msa0504700:intron | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3_4:49609673-49609692 | None:intergenic | 50.0% |
| TTGCTCGAGTACAAGTGACC+AGG | + | chr3_4:49610340-49610359 | None:intergenic | 50.0% | |
| CTTGTACTCGAGCAAAGACC+GGG | - | chr3_4:49610345-49610364 | Msa0504700:intron | 50.0% | |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3_4:49610359-49610378 | Msa0504700:intron | 50.0% | |
| GTAGATGGTACAATCCTCCG+TGG | - | chr3_4:49610374-49610393 | Msa0504700:intron | 50.0% | |
| CAATCCTCCGTGGTTCAATG+AGG | - | chr3_4:49610384-49610403 | Msa0504700:intron | 50.0% | |
| AGCAGTCACTGCTAGATACC+TGG | - | chr3_4:49610683-49610702 | Msa0504700:intron | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3_4:49610876-49610895 | Msa0504700:intron | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3_4:49611758-49611777 | Msa0504700:intron | 50.0% | |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3_4:49612310-49612329 | Msa0504700:intron | 50.0% |
| GAGCTATCCTGGAGAGCTTA+AGG | + | chr3_4:49612694-49612713 | None:intergenic | 50.0% | |
| CTGCTCTTCCAGAAGGATCA+AGG | + | chr3_4:49612961-49612980 | None:intergenic | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+AGG | + | chr3_4:49612968-49612987 | None:intergenic | 50.0% | |
| ! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3_4:49612965-49612984 | Msa0504700:intron | 50.0% |
| GCATCCTTGAGCTTTCACGC+AGG | - | chr3_4:49608586-49608605 | Msa0504700:three_prime_UTR | 55.0% | |
| !! | TGAAGCACCGTGGTCCAGAT+TGG | - | chr3_4:49609587-49609606 | Msa0504700:CDS | 55.0% |
| ACCGTGGTCCAGATTGGAGT+GGG | - | chr3_4:49609593-49609612 | Msa0504700:CDS | 55.0% | |
| CTCGAGTACAAGTGACCAGG+TGG | + | chr3_4:49610337-49610356 | None:intergenic | 55.0% | |
| ACAGCCTCATTGAACCACGG+AGG | + | chr3_4:49610391-49610410 | None:intergenic | 55.0% | |
| GTCACTGCTAGATACCTGGC+TGG | - | chr3_4:49610687-49610706 | Msa0504700:intron | 55.0% | |
| ! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3_4:49610704-49610723 | None:intergenic | 55.0% |
| TCTCTTCCGGCCTTAAGGTC+AGG | + | chr3_4:49610889-49610908 | None:intergenic | 55.0% | |
| CCACTTCTCTTCCGGCCTTA+AGG | + | chr3_4:49610894-49610913 | None:intergenic | 55.0% | |
| CCTTAAGGCCGGAAGAGAAG+TGG | - | chr3_4:49610891-49610910 | Msa0504700:intron | 55.0% | |
| !! | AGGTGTTGCTGCCCTGATTG+TGG | + | chr3_4:49611616-49611635 | None:intergenic | 55.0% |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3_4:49612893-49612912 | None:intergenic | 55.0% | |
| CACCGTGGTCCAGATTGGAG+TGG | - | chr3_4:49609592-49609611 | Msa0504700:CDS | 60.0% | |
| GCCCACTCCAATCTGGACCA+CGG | + | chr3_4:49609597-49609616 | None:intergenic | 60.0% | |
| TGGTGGAGCCCACTCCAATC+TGG | + | chr3_4:49609604-49609623 | None:intergenic | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3_4:49609607-49609626 | Msa0504700:CDS | 60.0% |
| GGTGCACCTGACCTTAAGGC+CGG | - | chr3_4:49610880-49610899 | Msa0504700:intron | 60.0% | |
| GCAAGGCTAACGGTTCCTGG+AGG | - | chr3_4:49612875-49612894 | Msa0504700:intron | 60.0% | |
| !! | CGCGGTTTAGGTTGCGGTCG+CGG | - | chr3_4:49609962-49609981 | Msa0504700:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 49608375 | 49613380 | 49608375 | ID=Msa0504700;Name=Msa0504700 |
| chr3_4 | mRNA | 49608375 | 49613380 | 49608375 | ID=Msa0504700-mRNA-1;Parent=Msa0504700;Name=Msa0504700-mRNA-1;_AED=0.07;_eAED=0.07;_QI=153|1|1|1|1|1|13|278|586 |
| chr3_4 | exon | 49608375 | 49608886 | 49608375 | ID=Msa0504700-mRNA-1:exon:10674;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49609188 | 49609295 | 49609188 | ID=Msa0504700-mRNA-1:exon:10673;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49609390 | 49609476 | 49609390 | ID=Msa0504700-mRNA-1:exon:10672;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49609568 | 49609648 | 49609568 | ID=Msa0504700-mRNA-1:exon:10671;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49609737 | 49609871 | 49609737 | ID=Msa0504700-mRNA-1:exon:10670;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49609976 | 49610197 | 49609976 | ID=Msa0504700-mRNA-1:exon:10669;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49610795 | 49610875 | 49610795 | ID=Msa0504700-mRNA-1:exon:10668;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49610988 | 49611149 | 49610988 | ID=Msa0504700-mRNA-1:exon:10667;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49611293 | 49611486 | 49611293 | ID=Msa0504700-mRNA-1:exon:10666;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49611580 | 49611721 | 49611580 | ID=Msa0504700-mRNA-1:exon:10665;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49611835 | 49611930 | 49611835 | ID=Msa0504700-mRNA-1:exon:10664;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49612032 | 49612170 | 49612032 | ID=Msa0504700-mRNA-1:exon:10663;Parent=Msa0504700-mRNA-1 |
| chr3_4 | exon | 49613148 | 49613380 | 49613148 | ID=Msa0504700-mRNA-1:exon:10662;Parent=Msa0504700-mRNA-1 |
| chr3_4 | five_prime_UTR | 49613228 | 49613380 | 49613228 | ID=Msa0504700-mRNA-1:five_prime_utr;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49613148 | 49613227 | 49613148 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49612032 | 49612170 | 49612032 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49611835 | 49611930 | 49611835 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49611580 | 49611721 | 49611580 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49611293 | 49611486 | 49611293 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49610988 | 49611149 | 49610988 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49610795 | 49610875 | 49610795 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49609976 | 49610197 | 49609976 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49609737 | 49609871 | 49609737 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49609568 | 49609648 | 49609568 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49609390 | 49609476 | 49609390 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49609188 | 49609295 | 49609188 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | CDS | 49608653 | 49608886 | 49608653 | ID=Msa0504700-mRNA-1:cds;Parent=Msa0504700-mRNA-1 |
| chr3_4 | three_prime_UTR | 49608375 | 49608652 | 49608375 | ID=Msa0504700-mRNA-1:three_prime_utr;Parent=Msa0504700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
