Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225650 | XP_013462549.1 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225650 | sp|Q08448|LPL1_YEAST | 26.050 | 238 | 132 | 8 | 84 | 311 | 6 | 209 | 4.77e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0705520 | Msa1225650 | -0.816590 | 5.113789e-52 | -8.615850e-47 |
| Msa0802950 | Msa1225650 | 0.800697 | 1.276080e-48 | -8.615850e-47 |
| Msa0225070 | Msa1225650 | 0.818471 | 1.926982e-52 | -8.615850e-47 |
| Msa1225650 | Msa1323260 | 0.812954 | 3.268439e-51 | -8.615850e-47 |
| Msa1225650 | Msa1413190 | 0.989337 | 1.083377e-177 | -8.615850e-47 |
| Msa1225650 | Msa1429510 | 0.994169 | 4.198381e-205 | -8.615850e-47 |
| Msa0392090 | Msa1225650 | 0.818694 | 1.714592e-52 | -8.615850e-47 |
| Msa0470000 | Msa1225650 | 0.801327 | 9.487959e-49 | -8.615850e-47 |
| Msa0470040 | Msa1225650 | 0.826059 | 3.339633e-54 | -8.615850e-47 |
| Msa0474570 | Msa1225650 | -0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa1035640 | Msa1225650 | 0.804581 | 2.016432e-49 | -8.615850e-47 |
| Msa0313870 | Msa1225650 | 0.831703 | 1.436643e-55 | -8.615850e-47 |
| Msa1205270 | Msa1225650 | 0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa0487890 | Msa1225650 | 0.807650 | 4.557519e-50 | -8.615850e-47 |
| Msa0538050 | Msa1225650 | 0.811366 | 7.257191e-51 | -8.615850e-47 |
| Msa0547340 | Msa1225650 | -0.800385 | 1.477523e-48 | -8.615850e-47 |
| Msa0566930 | Msa1225650 | -0.803515 | 3.360027e-49 | -8.615850e-47 |
| Msa0967900 | Msa1225650 | 0.833630 | 4.776465e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225650 | MtrunA17_Chr2g0283771 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Msa1225650 | MtrunA17_Chr8g0379001 | 72.889 | 450 | 107 | 7 | 3 | 438 | 2 | 450 | 0.0 | 646 |
| Msa1225650 | MtrunA17_Chr4g0072801 | 44.476 | 353 | 173 | 5 | 82 | 426 | 72 | 409 | 5.13e-92 | 284 |
| Msa1225650 | MtrunA17_Chr0c06g0493481 | 43.370 | 362 | 170 | 8 | 79 | 426 | 76 | 416 | 1.80e-90 | 280 |
| Msa1225650 | MtrunA17_Chr3g0140681 | 42.210 | 353 | 190 | 6 | 79 | 427 | 56 | 398 | 1.52e-88 | 275 |
| Msa1225650 | MtrunA17_Chr1g0170451 | 44.444 | 342 | 169 | 5 | 83 | 424 | 30 | 350 | 3.29e-88 | 272 |
| Msa1225650 | MtrunA17_Chr7g0214251 | 50.575 | 87 | 40 | 2 | 149 | 232 | 40 | 126 | 1.32e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225650 | AT1G29120.1 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1225650 | AT1G29120.8 | 67.085 | 398 | 122 | 4 | 45 | 438 | 63 | 455 | 0.0 | 520 |
| Msa1225650 | AT1G29120.2 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1225650 | AT1G29120.5 | 67.003 | 397 | 121 | 5 | 47 | 438 | 64 | 455 | 2.18e-180 | 511 |
| Msa1225650 | AT1G29120.7 | 68.378 | 370 | 108 | 4 | 47 | 412 | 64 | 428 | 2.44e-170 | 485 |
| Msa1225650 | AT1G29120.4 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.20e-147 | 425 |
| Msa1225650 | AT1G29120.3 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.70e-147 | 425 |
| Msa1225650 | AT1G29120.6 | 66.023 | 259 | 82 | 3 | 47 | 304 | 64 | 317 | 6.65e-113 | 335 |
| Msa1225650 | AT4G25770.1 | 47.674 | 344 | 159 | 4 | 82 | 424 | 91 | 414 | 1.19e-96 | 296 |
| Msa1225650 | AT4G25770.2 | 47.385 | 325 | 150 | 4 | 82 | 405 | 91 | 395 | 7.38e-89 | 276 |
| Msa1225650 | AT5G51180.2 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1225650 | AT5G51180.1 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1225650 | AT1G10040.1 | 42.090 | 354 | 180 | 6 | 79 | 426 | 76 | 410 | 2.13e-85 | 267 |
| Msa1225650 | AT1G10040.2 | 42.342 | 333 | 167 | 6 | 79 | 405 | 76 | 389 | 2.55e-78 | 249 |
Find 161 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTAGCTCCATTGTTTAT+TGG | 0.190651 | 8_1:+91115964 | Msa1225650:CDS |
| CCTGAAGCGAATATCCTTTC+TGG | 0.194294 | 8_1:+91115179 | Msa1225650:CDS |
| TGTAGAATTTCATGAAATTA+TGG | 0.246342 | 8_1:+91117031 | Msa1225650:CDS |
| GCTTACACTAAGACATTTAC+TGG | 0.264384 | 8_1:+91114994 | Msa1225650:CDS |
| ACACGTAGGAAAATTGAATA+AGG | 0.270828 | 8_1:+91117517 | Msa1225650:three_prime_UTR |
| TAAGTAAGTGTGAAATTTCT+TGG | 0.281576 | 8_1:-91112288 | None:intergenic |
| CCACATTCGTAAACCTTTAC+TGG | 0.281747 | 8_1:+91117489 | Msa1225650:three_prime_UTR |
| TACAATTATTTGGAAAGTTC+TGG | 0.286429 | 8_1:+91112336 | Msa1225650:five_prime_UTR |
| CTACAACGCGCGTAAATAAA+AGG | 0.296569 | 8_1:-91112386 | None:intergenic |
| GCAGTACATGGATGTTACTA+TGG | 0.298616 | 8_1:-91117258 | None:intergenic |
| TTGTTCTTGTCCATGGTATC+TGG | 0.304231 | 8_1:+91113801 | Msa1225650:CDS |
| AAGTTCGATTTCCCTCCTTA+TGG | 0.311023 | 8_1:-91116326 | None:intergenic |
| TGAATTTACACAGAAAATAA+TGG | 0.312150 | 8_1:-91117678 | None:intergenic |
| TCCTTTCTGGCCCATTCTCT+TGG | 0.333297 | 8_1:+91115192 | Msa1225650:CDS |
| TGAGGTCCATCGGAAGGAAT+TGG | 0.338684 | 8_1:-91116954 | None:intergenic |
| GTTCTGGTTCCTTTGCTATA+TGG | 0.340792 | 8_1:+91112352 | Msa1225650:exon |
| ACAGCCTCCACGCCAATCTT+TGG | 0.344306 | 8_1:+91116893 | Msa1225650:intron |
| AGAAGAGTGTAAGGTATCTT+TGG | 0.350757 | 8_1:+91117596 | Msa1225650:three_prime_UTR |
| GAGGTCCATCGGAAGGAATT+GGG | 0.357643 | 8_1:-91116953 | None:intergenic |
| ATCAGGTTGGCCACTATTAT+AGG | 0.360766 | 8_1:-91115262 | None:intergenic |
| TCCTTTGCTTTCACTGCCTC+CGG | 0.369392 | 8_1:-91116984 | None:intergenic |
| TACTCATAGCTTCAGCTCTA+AGG | 0.378413 | 8_1:-91113712 | None:intergenic |
| TCAACTTTCACTCAGCAGTT+TGG | 0.384156 | 8_1:+91117224 | Msa1225650:CDS |
| CAAAAGAAGGGATGGTTTGT+TGG | 0.385209 | 8_1:-91116025 | None:intergenic |
| CCAACGCGGCCAATCTTTGT+TGG | 0.393315 | 8_1:-91117858 | None:intergenic |
| GGTGGAGGAAGAAGAGCAAC+AGG | 0.395750 | 8_1:-91112459 | None:intergenic |
| TGGCCACTATTATAGGTATC+AGG | 0.400578 | 8_1:-91115255 | None:intergenic |
| GGTGGCCATCCCAGCTCATC+TGG | 0.402780 | 8_1:+91112170 | Msa1225650:five_prime_UTR |
| CAATTGCATATCTAGCAAAT+AGG | 0.405550 | 8_1:-91115218 | None:intergenic |
| GCTAAAGTAATAAAATTCAT+TGG | 0.408625 | 8_1:-91115354 | None:intergenic |
| AAACCAAGAGGCATCGTTAC+GGG | 0.412999 | 8_1:+91117915 | Msa1225650:three_prime_UTR |
| TCGCAGTTTGCTGGATCATC+AGG | 0.414201 | 8_1:-91115279 | None:intergenic |
| TTTAACAGAGGAGATGATAC+AGG | 0.415436 | 8_1:+91117168 | Msa1225650:intron |
| ATGGCCACCGCCTACCAATC+AGG | 0.416351 | 8_1:-91112156 | None:intergenic |
| CATCTCCTTGTTCTTGTCCA+TGG | 0.421595 | 8_1:+91113794 | Msa1225650:CDS |
| TCCGCATAACTCCAGTCACC+TGG | 0.422658 | 8_1:-91114429 | None:intergenic |
| CGCGGCCAATCTTTGTTGGA+TGG | 0.423379 | 8_1:-91117854 | None:intergenic |
| GATACAGGGATTACAAAGAT+TGG | 0.424431 | 8_1:+91117183 | Msa1225650:CDS |
| TTTCTGGCCCATTCTCTTGG+AGG | 0.425581 | 8_1:+91115195 | Msa1225650:CDS |
| ACTCCGCATCTTGGCGTAAG+AGG | 0.426849 | 8_1:+91115378 | Msa1225650:CDS |
| TTGTCCATGGTATCTGGTCT+AGG | 0.430182 | 8_1:+91113807 | Msa1225650:CDS |
| AAAAGAAGGGATGGTTTGTT+GGG | 0.430748 | 8_1:-91116024 | None:intergenic |
| ATCGGAACACCGAACAGAAA+TGG | 0.430885 | 8_1:-91115922 | None:intergenic |
| AAGAGGGATGATTGCTGGAC+TGG | 0.433128 | 8_1:+91115329 | Msa1225650:CDS |
| GAATTTACACAGAAAATAAT+GGG | 0.434251 | 8_1:-91117677 | None:intergenic |
| TAAATGTTGTGATAAGAAAC+AGG | 0.435922 | 8_1:+91117465 | Msa1225650:three_prime_UTR |
| ACAACATTTATTTATGATGT+TGG | 0.437266 | 8_1:-91117452 | None:intergenic |
| GTTTGTATTGATGTATCAAA+TGG | 0.437523 | 8_1:-91117729 | None:intergenic |
| CAATTGTGAGCCAGATGAGC+TGG | 0.442144 | 8_1:-91112180 | None:intergenic |
| CCAGAAAGGATATTCGCTTC+AGG | 0.442879 | 8_1:-91115179 | None:intergenic |
| ACAAGAACAAGGAGATGATC+AGG | 0.445282 | 8_1:-91113788 | None:intergenic |
| ACTGATACAGCCCAGGTGAC+TGG | 0.446874 | 8_1:+91114418 | Msa1225650:intron |
| TTAATAGAATCTCTGGACTA+AGG | 0.447403 | 8_1:-91117830 | None:intergenic |
| GTTACGGGCACAAGATCATT+TGG | 0.449814 | 8_1:+91117930 | Msa1225650:three_prime_UTR |
| GAAAATGAAGCTAGGGGTGG+AGG | 0.449942 | 8_1:-91112474 | None:intergenic |
| TGGAGGAAGAAGAGCAACAG+GGG | 0.449972 | 8_1:-91112457 | None:intergenic |
| AAGTAAGTGTGAAATTTCTT+GGG | 0.452608 | 8_1:-91112287 | None:intergenic |
| AGAACGTGTTTCTCAAACTA+GGG | 0.453072 | 8_1:+91117646 | Msa1225650:three_prime_UTR |
| CAGAAGCCATTCTCAAAAGA+AGG | 0.453668 | 8_1:-91116038 | None:intergenic |
| CAAATAGGCCTCCAAGAGAA+TGG | 0.458924 | 8_1:-91115203 | None:intergenic |
| TCAAAGCTTCCATTTCTGTT+CGG | 0.459099 | 8_1:+91115913 | Msa1225650:intron |
| AGTGTCAGGAGAAGAGTGTA+AGG | 0.460987 | 8_1:+91117587 | Msa1225650:three_prime_UTR |
| CGATGGACCTCAATTTCCTC+CGG | 0.468852 | 8_1:+91116965 | Msa1225650:CDS |
| CTACGTGTATAGACCAGTAA+AGG | 0.472537 | 8_1:-91117502 | None:intergenic |
| GGATGGCTTAATAGAATCTC+TGG | 0.472863 | 8_1:-91117837 | None:intergenic |
| TTTGTATTGATGTATCAAAT+GGG | 0.473174 | 8_1:-91117728 | None:intergenic |
| TAACCTATATAGATATGGTT+GGG | 0.474158 | 8_1:+91116290 | Msa1225650:intron |
| CACGTAGGAAAATTGAATAA+GGG | 0.476312 | 8_1:+91117518 | Msa1225650:three_prime_UTR |
| GTGCCCGTAACGATGCCTCT+TGG | 0.477328 | 8_1:-91117918 | None:intergenic |
| GCTTGTATCCATCCAAAGAT+TGG | 0.478195 | 8_1:-91116905 | None:intergenic |
| ATGGCTTCTGACTGTGAAGA+TGG | 0.478288 | 8_1:+91116051 | Msa1225650:CDS |
| TTAAGCCATCCAACAAAGAT+TGG | 0.479936 | 8_1:+91117849 | Msa1225650:three_prime_UTR |
| TGTTGGGTTTATCATCAGTA+AGG | 0.480234 | 8_1:-91116008 | None:intergenic |
| ATCTGATAGTATATAGTGTC+AGG | 0.481869 | 8_1:+91117573 | Msa1225650:three_prime_UTR |
| TCACCTGATACCTATAATAG+TGG | 0.482484 | 8_1:+91115252 | Msa1225650:CDS |
| AGGTGAGTGAAAATGAAGCT+AGG | 0.483864 | 8_1:-91112482 | None:intergenic |
| AAATTATGAAATCTAGCAAA+TGG | 0.485991 | 8_1:+91117805 | Msa1225650:three_prime_UTR |
| ACTTTAGCAACTCCGCATCT+TGG | 0.486963 | 8_1:+91115369 | Msa1225650:CDS |
| CCAATAAACAATGGAGCTAC+AGG | 0.492808 | 8_1:-91115964 | None:intergenic |
| TAGCTCCATTGTTTATTGGT+CGG | 0.497267 | 8_1:+91115968 | Msa1225650:CDS |
| AAGAAATGGCTTCACAATGC+TGG | 0.502561 | 8_1:+91117368 | Msa1225650:CDS |
| AAAACCAAGAGGCATCGTTA+CGG | 0.503479 | 8_1:+91117914 | Msa1225650:three_prime_UTR |
| ATAAGGAGGGAAATCGAACT+TGG | 0.506230 | 8_1:+91116328 | Msa1225650:CDS |
| ATACAGGGATTACAAAGATT+GGG | 0.509448 | 8_1:+91117184 | Msa1225650:CDS |
| AAGTCTCCTGCTAAAACCAC+TGG | 0.510527 | 8_1:+91113749 | Msa1225650:CDS |
| TTTACTGGGATTGATGAAGC+TGG | 0.513591 | 8_1:+91115009 | Msa1225650:CDS |
| CCAGTAAAGGTTTACGAATG+TGG | 0.514517 | 8_1:-91117489 | None:intergenic |
| ACTGCCTCCGGAGGAAATTG+AGG | 0.515275 | 8_1:-91116972 | None:intergenic |
| AAATAGGCCTCCAAGAGAAT+GGG | 0.520903 | 8_1:-91115202 | None:intergenic |
| CCAACAAAGATTGGCCGCGT+TGG | 0.521788 | 8_1:+91117858 | Msa1225650:three_prime_UTR |
| TTAACCTATATAGATATGGT+TGG | 0.524781 | 8_1:+91116289 | Msa1225650:intron |
| TCCAAGAGAATGGGCCAGAA+AGG | 0.524839 | 8_1:-91115193 | None:intergenic |
| AGCTATGAGTACTACCACTC+AGG | 0.525136 | 8_1:+91113724 | Msa1225650:CDS |
| TAATAGAATCTCTGGACTAA+GGG | 0.526979 | 8_1:-91117829 | None:intergenic |
| CCATTGTTTATTGGTCGGAC+TGG | 0.527917 | 8_1:+91115973 | Msa1225650:CDS |
| TTATGATGTTGGTAAAATTG+AGG | 0.528337 | 8_1:-91117441 | None:intergenic |
| GGAGGAAGAAGAGCAACAGG+GGG | 0.529934 | 8_1:-91112456 | None:intergenic |
| GGTGGCGCACGTCCTCCATA+AGG | 0.530656 | 8_1:+91116311 | Msa1225650:CDS |
| AGGAAAATTGAATAAGGGAA+AGG | 0.533832 | 8_1:+91117523 | Msa1225650:three_prime_UTR |
| AAGGATATTCGCTTCAGGCT+CGG | 0.535585 | 8_1:-91115174 | None:intergenic |
| ATTAGGTGTCGTGACCTGAT+TGG | 0.537221 | 8_1:+91112142 | None:intergenic |
| GCCATTCTCAAAAGAAGGGA+TGG | 0.545625 | 8_1:-91116033 | None:intergenic |
| GGTGAGTGAAAATGAAGCTA+GGG | 0.547244 | 8_1:-91112481 | None:intergenic |
| AGGTCCATCGGAAGGAATTG+GGG | 0.548499 | 8_1:-91116952 | None:intergenic |
| TGTTATGACACAACAACCGC+TGG | 0.549188 | 8_1:+91112246 | Msa1225650:five_prime_UTR |
| TTCCCTCTTACGCCAAGATG+CGG | 0.550452 | 8_1:-91115381 | None:intergenic |
| TTTGCTTTCACTGCCTCCGG+AGG | 0.552823 | 8_1:-91116981 | None:intergenic |
| GAGAACGTGTTTCTCAAACT+AGG | 0.555847 | 8_1:+91117645 | Msa1225650:three_prime_UTR |
| CTCCGCATCTTGGCGTAAGA+GGG | 0.558128 | 8_1:+91115379 | Msa1225650:CDS |
| GAGGGAAATCGAACTTGGTA+AGG | 0.559034 | 8_1:+91116333 | Msa1225650:CDS |
| TGGCTTCACAATGCTGGTGT+AGG | 0.563718 | 8_1:+91117374 | Msa1225650:CDS |
| CGGAGGAAATTGAGGTCCAT+CGG | 0.564835 | 8_1:-91116964 | None:intergenic |
| GGCGCACGTCCTCCATAAGG+AGG | 0.571549 | 8_1:+91116314 | Msa1225650:CDS |
| TTCGATTTCCCTCCTTATGG+AGG | 0.572163 | 8_1:-91116323 | None:intergenic |
| CAGTACATGGATGTTACTAT+GGG | 0.572825 | 8_1:-91117257 | None:intergenic |
| CTTACACTAAGACATTTACT+GGG | 0.574022 | 8_1:+91114995 | Msa1225650:CDS |
| GTGGAGGAAGAAGAGCAACA+GGG | 0.577058 | 8_1:-91112458 | None:intergenic |
| CAGTAAAGGTTTACGAATGT+GGG | 0.583435 | 8_1:-91117488 | None:intergenic |
| GTGAGCCAGATGAGCTGGGA+TGG | 0.589418 | 8_1:-91112175 | None:intergenic |
| CCTCCACGCCAATCTTTGGA+TGG | 0.594116 | 8_1:+91116897 | Msa1225650:CDS |
| AAAATAGGGAATTACCAGAA+AGG | 0.595675 | 8_1:-91112502 | None:intergenic |
| AGTTTGCTGGATCATCAGGT+TGG | 0.596532 | 8_1:-91115275 | None:intergenic |
| TGATCCAGCAAACTGCGAGA+TGG | 0.597740 | 8_1:+91115284 | Msa1225650:CDS |
| AGAAGCCATTCTCAAAAGAA+GGG | 0.599139 | 8_1:-91116037 | None:intergenic |
| GAATTTCATGAAATTATGGA+AGG | 0.599293 | 8_1:+91117035 | Msa1225650:CDS |
| GGTGTCGTGACCTGATTGGT+AGG | 0.603721 | 8_1:+91112146 | None:intergenic |
| CCATCCAAAGATTGGCGTGG+AGG | 0.605389 | 8_1:-91116897 | None:intergenic |
| GCTATGAGTACTACCACTCA+GGG | 0.606664 | 8_1:+91113725 | Msa1225650:CDS |
| GACTCAACAGCAGCAACTTG+TGG | 0.607470 | 8_1:-91117883 | None:intergenic |
| AGCAGGAGACTTTCCCTGAG+TGG | 0.608321 | 8_1:-91113738 | None:intergenic |
| GTGACCTGATTGGTAGGCGG+TGG | 0.609899 | 8_1:+91112152 | None:intergenic |
| AGGGATTACAAAGATTGGGA+TGG | 0.615998 | 8_1:+91117188 | Msa1225650:CDS |
| CCGCATAACTCCAGTCACCT+GGG | 0.616017 | 8_1:-91114428 | None:intergenic |
| GGAAATTGAGGTCCATCGGA+AGG | 0.616513 | 8_1:-91116960 | None:intergenic |
| AGTGAAAATGAAGCTAGGGG+TGG | 0.618416 | 8_1:-91112477 | None:intergenic |
| TTAACAGAGGAGATGATACA+GGG | 0.625473 | 8_1:+91117169 | Msa1225650:intron |
| AATTGTGAGCCAGATGAGCT+GGG | 0.632582 | 8_1:-91112179 | None:intergenic |
| AGATACCATGGACAAGAACA+AGG | 0.635264 | 8_1:-91113799 | None:intergenic |
| CCTATATAGATATGGTTGGG+TGG | 0.635344 | 8_1:+91116293 | Msa1225650:intron |
| ACTTCTGCAGGTGCAAACAA+AGG | 0.635660 | 8_1:+91113674 | Msa1225650:intron |
| TATCCATCCAAAGATTGGCG+TGG | 0.638279 | 8_1:-91116900 | None:intergenic |
| ATGCTGCTGCCATATAGCAA+AGG | 0.640400 | 8_1:-91112361 | None:intergenic |
| TGGACCTCAATTTCCTCCGG+AGG | 0.641292 | 8_1:+91116968 | Msa1225650:CDS |
| ATTACCTAGACCAGATACCA+TGG | 0.645160 | 8_1:-91113811 | None:intergenic |
| AGTCTCCTGCTAAAACCACT+GGG | 0.648790 | 8_1:+91113750 | Msa1225650:CDS |
| ATCATTCTTCAGATTCCCAG+TGG | 0.649086 | 8_1:-91113765 | None:intergenic |
| GAACGTGTTTCTCAAACTAG+GGG | 0.649295 | 8_1:+91117647 | Msa1225650:three_prime_UTR |
| CCCAGGTGACTGGAGTTATG+CGG | 0.649781 | 8_1:+91114428 | Msa1225650:CDS |
| TCCGGAGGCAGTGAAAGCAA+AGG | 0.653002 | 8_1:+91116983 | Msa1225650:CDS |
| CCAGTCCGACCAATAAACAA+TGG | 0.653339 | 8_1:-91115973 | None:intergenic |
| TTGTATTGATGTATCAAATG+GGG | 0.657146 | 8_1:-91117727 | None:intergenic |
| GCGCACGTCCTCCATAAGGA+GGG | 0.668252 | 8_1:+91116315 | Msa1225650:CDS |
| ATGTTACTATGGGCAAAGAG+AGG | 0.669169 | 8_1:-91117247 | None:intergenic |
| CAAATTGTGACAAGTTCCAG+CGG | 0.669267 | 8_1:-91112262 | None:intergenic |
| GGTCCATCGGAAGGAATTGG+GGG | 0.676997 | 8_1:-91116951 | None:intergenic |
| AGGTGACTGGAGTTATGCGG+AGG | 0.678765 | 8_1:+91114431 | Msa1225650:CDS |
| GTGAGTGAAAATGAAGCTAG+GGG | 0.707096 | 8_1:-91112480 | None:intergenic |
| AGCAACTTGTGGTTCCAACG+CGG | 0.713596 | 8_1:-91117872 | None:intergenic |
| CTTTACTGGTCTATACACGT+AGG | 0.714453 | 8_1:+91117503 | Msa1225650:three_prime_UTR |
| AACGTGTTTCTCAAACTAGG+GGG | 0.716656 | 8_1:+91117648 | Msa1225650:three_prime_UTR |
| GTCGTGACCTGATTGGTAGG+CGG | 0.716999 | 8_1:+91112149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAAGAATAAAATA+GGG | - | chr8_1:91112519-91112538 | None:intergenic | 10.0% |
| !! | AAATTGAAAAAGAATAAAAT+AGG | - | chr8_1:91112520-91112539 | None:intergenic | 10.0% |
| !!! | TTTTATTCTTTTTCAATTTT+AGG | + | chr8_1:91112521-91112540 | Msa1225650:intron | 10.0% |
| !!! | ATCATATATTAATATTTCTA+TGG | - | chr8_1:91113638-91113657 | None:intergenic | 10.0% |
| !!! | TTAATATATGATTTTAATGT+TGG | + | chr8_1:91113646-91113665 | Msa1225650:intron | 10.0% |
| !! | AATTAAAGATTAATTTAACA+TGG | - | chr8_1:91114920-91114939 | None:intergenic | 10.0% |
| !! | CAAAAATAGATACAATTATT+TGG | + | chr8_1:91112326-91112345 | Msa1225650:five_prime_UTR | 15.0% |
| !! | TAAAGAAAACAAGAAAAAAA+AGG | - | chr8_1:91114549-91114568 | None:intergenic | 15.0% |
| !!! | AAGAAATTTTTTGAAAATCT+TGG | + | chr8_1:91114693-91114712 | Msa1225650:intron | 15.0% |
| !!! | AGAAATTTTTTGAAAATCTT+GGG | + | chr8_1:91114694-91114713 | Msa1225650:intron | 15.0% |
| !!! | AGAAATCAAATTCATTTTTA+AGG | - | chr8_1:91114956-91114975 | None:intergenic | 15.0% |
| !! | GAACTATATAAAAATTCTAA+AGG | - | chr8_1:91115842-91115861 | None:intergenic | 15.0% |
| !!! | AGAATTTTTATATAGTTCAA+TGG | + | chr8_1:91115844-91115863 | Msa1225650:intron | 15.0% |
| !!! | GAATTTTTATATAGTTCAAT+GGG | + | chr8_1:91115845-91115864 | Msa1225650:intron | 15.0% |
| !! | AATACAAATTTCATAATCAT+AGG | - | chr8_1:91116478-91116497 | None:intergenic | 15.0% |
| !! | TGAAAACAAAAATGAAATAA+AGG | - | chr8_1:91117782-91117801 | None:intergenic | 15.0% |
| !!! | GTTTAACTTGTTCTATAATT+CGG | + | chr8_1:91112583-91112602 | Msa1225650:intron | 20.0% |
| !! | AATCATCATAAATTTAGACA+TGG | - | chr8_1:91112833-91112852 | None:intergenic | 20.0% |
| !!! | TGTAGTAATTTGTATTGATT+AGG | + | chr8_1:91113009-91113028 | Msa1225650:intron | 20.0% |
| !! | GAATTCAGAATTATTCAATT+AGG | + | chr8_1:91113098-91113117 | Msa1225650:intron | 20.0% |
| !!! | TCTTTTGTTTCTCTTTAATT+CGG | + | chr8_1:91113235-91113254 | Msa1225650:intron | 20.0% |
| !!! | AAGTTTTCACTGATTATTTA+AGG | - | chr8_1:91114187-91114206 | None:intergenic | 20.0% |
| !! | TATTGAACCATAAGTAAAAA+AGG | - | chr8_1:91114505-91114524 | None:intergenic | 20.0% |
| !! | TTCAAAAAATTTCTTCTGTT+GGG | - | chr8_1:91114688-91114707 | None:intergenic | 20.0% |
| !! | TTTCAAAAAATTTCTTCTGT+TGG | - | chr8_1:91114689-91114708 | None:intergenic | 20.0% |
| !! | GCTAAAGTAATAAAATTCAT+TGG | - | chr8_1:91115357-91115376 | None:intergenic | 20.0% |
| !! | TAAAGGAATAACACAAATTA+AGG | - | chr8_1:91116272-91116291 | None:intergenic | 20.0% |
| !! | AAAATTAATGCATTATAGTC+AGG | - | chr8_1:91116574-91116593 | None:intergenic | 20.0% |
| !!! | AATATTTGAAACATAGGATA+TGG | - | chr8_1:91116720-91116739 | None:intergenic | 20.0% |
| !! | TGTAGAATTTCATGAAATTA+TGG | + | chr8_1:91117031-91117050 | Msa1225650:CDS | 20.0% |
| !! | ACAACATTTATTTATGATGT+TGG | - | chr8_1:91117455-91117474 | None:intergenic | 20.0% |
| !! | GAATTTACACAGAAAATAAT+GGG | - | chr8_1:91117680-91117699 | None:intergenic | 20.0% |
| !! | TGAATTTACACAGAAAATAA+TGG | - | chr8_1:91117681-91117700 | None:intergenic | 20.0% |
| !!! | TTTGTATTGATGTATCAAAT+GGG | - | chr8_1:91117731-91117750 | None:intergenic | 20.0% |
| !! | ACAAAAATGAAATAAAGGAA+TGG | - | chr8_1:91117777-91117796 | None:intergenic | 20.0% |
| !! | AAATTATGAAATCTAGCAAA+TGG | + | chr8_1:91117805-91117824 | Msa1225650:three_prime_UTR | 20.0% |
| ! | AAGTAAGTGTGAAATTTCTT+GGG | - | chr8_1:91112290-91112309 | None:intergenic | 25.0% |
| ! | TAAGTAAGTGTGAAATTTCT+TGG | - | chr8_1:91112291-91112310 | None:intergenic | 25.0% |
| ! | TACAATTATTTGGAAAGTTC+TGG | + | chr8_1:91112336-91112355 | Msa1225650:five_prime_UTR | 25.0% |
| ! | TGAGAAAAAGAAGTAATTAG+TGG | - | chr8_1:91112419-91112438 | None:intergenic | 25.0% |
| ! | AGTTAAACAACAATAAATGC+AGG | - | chr8_1:91112571-91112590 | None:intergenic | 25.0% |
| !! | TCTATAATTCGGTTAATTTG+TGG | + | chr8_1:91112594-91112613 | Msa1225650:intron | 25.0% |
| !!! | CTATAATTCGGTTAATTTGT+GGG | + | chr8_1:91112595-91112614 | Msa1225650:intron | 25.0% |
| !!! | TATAATTCGGTTAATTTGTG+GGG | + | chr8_1:91112596-91112615 | Msa1225650:intron | 25.0% |
| ! | GACAAAGAATTATTTCATTC+AGG | - | chr8_1:91112692-91112711 | None:intergenic | 25.0% |
| ! | CAATGATTTGAATTCAATTG+CGG | + | chr8_1:91112795-91112814 | Msa1225650:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | + | chr8_1:91113014-91113033 | Msa1225650:intron | 25.0% |
| ! | GTCCTATTTATACAAACTAA+GGG | - | chr8_1:91113056-91113075 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAGGACCATT+TGG | + | chr8_1:91113060-91113079 | Msa1225650:intron | 25.0% |
| ! | TATTCAATTAGGAACCTTAT+TGG | + | chr8_1:91113109-91113128 | Msa1225650:intron | 25.0% |
| !!! | CTTTTGTTTCTCTTTAATTC+GGG | + | chr8_1:91113236-91113255 | Msa1225650:intron | 25.0% |
| !! | CCATTTTCTCAAATTATCAT+AGG | - | chr8_1:91113305-91113324 | None:intergenic | 25.0% |
| ! | CCTATGATAATTTGAGAAAA+TGG | + | chr8_1:91113302-91113321 | Msa1225650:intron | 25.0% |
| ! | AACTTCATGTCTAAAAAAAC+AGG | + | chr8_1:91113511-91113530 | Msa1225650:intron | 25.0% |
| ! | ACTTCATGTCTAAAAAAACA+GGG | + | chr8_1:91113512-91113531 | Msa1225650:intron | 25.0% |
| ! | TGATTGCAATTAAAAAGACT+AGG | - | chr8_1:91114114-91114133 | None:intergenic | 25.0% |
| ! | AACAAGTTAAAACATCCAAT+TGG | - | chr8_1:91114395-91114414 | None:intergenic | 25.0% |
| ! | AAGAGTTAAAAATGAACCTT+GGG | + | chr8_1:91114454-91114473 | Msa1225650:CDS | 25.0% |
| ! | AGAAAACAAGAAAAAAAAGG+TGG | - | chr8_1:91114546-91114565 | None:intergenic | 25.0% |
| ! | AAATGCTTAAAACTCATTGA+AGG | + | chr8_1:91114613-91114632 | Msa1225650:intron | 25.0% |
| ! | TCAAAAAATTTCTTCTGTTG+GGG | - | chr8_1:91114687-91114706 | None:intergenic | 25.0% |
| ! | TCAACATATACAACTAACTA+GGG | - | chr8_1:91114864-91114883 | None:intergenic | 25.0% |
| !! | ATATTTCCTTTTATCACAAC+AGG | + | chr8_1:91115128-91115147 | Msa1225650:intron | 25.0% |
| ! | TGTTCAGAACAATCAAATTA+TGG | + | chr8_1:91115414-91115433 | Msa1225650:intron | 25.0% |
| !!! | AGCTTTTATTTTGACACATA+TGG | + | chr8_1:91115437-91115456 | Msa1225650:intron | 25.0% |
| ! | ATATACTTCTTTCTCTTAAC+TGG | + | chr8_1:91115705-91115724 | Msa1225650:intron | 25.0% |
| ! | AAACTTGAATGATTAAGCAA+TGG | - | chr8_1:91115763-91115782 | None:intergenic | 25.0% |
| ! | TGGAAAATTCATGTATGTAA+TGG | + | chr8_1:91116071-91116090 | Msa1225650:intron | 25.0% |
| !!! | TGATTGTTTTACTGAAACAA+AGG | - | chr8_1:91116122-91116141 | None:intergenic | 25.0% |
| ! | TCCTTTAACCTATATAGATA+TGG | + | chr8_1:91116285-91116304 | Msa1225650:intron | 25.0% |
| ! | ACCATATCTATATAGGTTAA+AGG | - | chr8_1:91116289-91116308 | None:intergenic | 25.0% |
| ! | TTAACCTATATAGATATGGT+TGG | + | chr8_1:91116289-91116308 | Msa1225650:intron | 25.0% |
| ! | TAACCTATATAGATATGGTT+GGG | + | chr8_1:91116290-91116309 | Msa1225650:intron | 25.0% |
| !! | GTCTTCTAATTTTGAATCAT+TGG | + | chr8_1:91116652-91116671 | Msa1225650:intron | 25.0% |
| !! | CTAATTTTGAATCATTGGAA+TGG | + | chr8_1:91116657-91116676 | Msa1225650:intron | 25.0% |
| ! | AAAATTGTGATATGTTAGCA+GGG | - | chr8_1:91116695-91116714 | None:intergenic | 25.0% |
| ! | TAAAATTGTGATATGTTAGC+AGG | - | chr8_1:91116696-91116715 | None:intergenic | 25.0% |
| ! | CTACATGGAATTTATAGTTA+TGG | - | chr8_1:91116746-91116765 | None:intergenic | 25.0% |
| ! | GAATTTCATGAAATTATGGA+AGG | + | chr8_1:91117035-91117054 | Msa1225650:CDS | 25.0% |
| !!! | TCTTCTATTAGTTTTGGTTA+TGG | - | chr8_1:91117067-91117086 | None:intergenic | 25.0% |
| !!! | AGAGTATCTTCTATTAGTTT+TGG | - | chr8_1:91117073-91117092 | None:intergenic | 25.0% |
| !!! | AGATACTCTAGTTTACATTT+TGG | + | chr8_1:91117084-91117103 | Msa1225650:intron | 25.0% |
| !!! | GATACTCTAGTTTACATTTT+GGG | + | chr8_1:91117085-91117104 | Msa1225650:intron | 25.0% |
| ! | TTTATAACATGAGTATTCCT+TGG | + | chr8_1:91117332-91117351 | Msa1225650:intron | 25.0% |
| !! | TTATGATGTTGGTAAAATTG+AGG | - | chr8_1:91117444-91117463 | None:intergenic | 25.0% |
| ! | TAAATGTTGTGATAAGAAAC+AGG | + | chr8_1:91117465-91117484 | Msa1225650:three_prime_UTR | 25.0% |
| !! | TTGTATTGATGTATCAAATG+GGG | - | chr8_1:91117730-91117749 | None:intergenic | 25.0% |
| !! | GTTTGTATTGATGTATCAAA+TGG | - | chr8_1:91117732-91117751 | None:intergenic | 25.0% |
| AAAATAGGGAATTACCAGAA+AGG | - | chr8_1:91112505-91112524 | None:intergenic | 30.0% | |
| ACCAAGTAATTGAGTTCAAT+CGG | + | chr8_1:91112651-91112670 | Msa1225650:intron | 30.0% | |
| TATGAAGCACATACATTGTT+AGG | + | chr8_1:91112859-91112878 | Msa1225650:intron | 30.0% | |
| !! | TGCCCTTAGTTTGTATAAAT+AGG | + | chr8_1:91113051-91113070 | Msa1225650:intron | 30.0% |
| GGTCCTATTTATACAAACTA+AGG | - | chr8_1:91113057-91113076 | None:intergenic | 30.0% | |
| GAGTTAAAAGATAGTCTGAA+CGG | + | chr8_1:91113866-91113885 | Msa1225650:intron | 30.0% | |
| AAGAAAAACCAACAAGCTTA+AGG | + | chr8_1:91113897-91113916 | Msa1225650:intron | 30.0% | |
| CATAAAAACCTTAAGCTTGT+TGG | - | chr8_1:91113908-91113927 | None:intergenic | 30.0% | |
| TAACCAACATTGTTTCACAA+TGG | - | chr8_1:91113958-91113977 | None:intergenic | 30.0% | |
| CAATTAAAAAGACTAGGACA+GGG | - | chr8_1:91114108-91114127 | None:intergenic | 30.0% | |
| !! | AGGTTTTAGTGCAAGATATA+TGG | - | chr8_1:91114224-91114243 | None:intergenic | 30.0% |
| ATATATCTTGCACTAAAACC+TGG | + | chr8_1:91114223-91114242 | Msa1225650:intron | 30.0% | |
| TGCACAATATCTCTAGTAAT+TGG | + | chr8_1:91114277-91114296 | Msa1225650:intron | 30.0% | |
| TATCTCTAGTAATTGGATGT+TGG | + | chr8_1:91114284-91114303 | Msa1225650:intron | 30.0% | |
| GAAGAGTTAAAAATGAACCT+TGG | + | chr8_1:91114453-91114472 | Msa1225650:CDS | 30.0% | |
| ! | GAATTAAAAAGCTTTTCCCA+AGG | - | chr8_1:91114473-91114492 | None:intergenic | 30.0% |
| !! | GGGAAAAGCTTTTTAATTCA+TGG | + | chr8_1:91114474-91114493 | Msa1225650:CDS | 30.0% |
| !!! | GGTAACTCCTTTTTTACTTA+TGG | + | chr8_1:91114495-91114514 | Msa1225650:intron | 30.0% |
| GGTGGTAGAAACAAAATAAA+TGG | - | chr8_1:91114528-91114547 | None:intergenic | 30.0% | |
| TTAAAACTCATTGAAGGTAG+TGG | + | chr8_1:91114619-91114638 | Msa1225650:intron | 30.0% | |
| AATTTCACAGAAAACAAGCA+TGG | - | chr8_1:91114799-91114818 | None:intergenic | 30.0% | |
| CTCAACATATACAACTAACT+AGG | - | chr8_1:91114865-91114884 | None:intergenic | 30.0% | |
| CTTACACTAAGACATTTACT+GGG | + | chr8_1:91114995-91115014 | Msa1225650:CDS | 30.0% | |
| CAATTGCATATCTAGCAAAT+AGG | - | chr8_1:91115221-91115240 | None:intergenic | 30.0% | |
| ! | TACTGTATGTTTTATGCTGA+TGG | + | chr8_1:91115504-91115523 | Msa1225650:intron | 30.0% |
| TCACAGCTTACATAATGTTT+AGG | + | chr8_1:91115528-91115547 | Msa1225650:intron | 30.0% | |
| !!! | TCCTACGAATTTTTTCTTAC+TGG | + | chr8_1:91115639-91115658 | Msa1225650:intron | 30.0% |
| !!! | CCTACGAATTTTTTCTTACT+GGG | + | chr8_1:91115640-91115659 | Msa1225650:intron | 30.0% |
| ! | AATAAGTGTCACTAATACAC+TGG | - | chr8_1:91116238-91116257 | None:intergenic | 30.0% |
| AGTGTATTAGTGACACTTAT+TGG | + | chr8_1:91116237-91116256 | Msa1225650:intron | 30.0% | |
| AACACAAATTAAGGAGGAAA+GGG | - | chr8_1:91116263-91116282 | None:intergenic | 30.0% | |
| TAACACAAATTAAGGAGGAA+AGG | - | chr8_1:91116264-91116283 | None:intergenic | 30.0% | |
| AGGAATAACACAAATTAAGG+AGG | - | chr8_1:91116269-91116288 | None:intergenic | 30.0% | |
| ! | TTGTCTCCTTTTTATGTTGA+AGG | + | chr8_1:91116382-91116401 | Msa1225650:intron | 30.0% |
| TTGAGACCTTCAACATAAAA+AGG | - | chr8_1:91116391-91116410 | None:intergenic | 30.0% | |
| ! | AGAAGACTGAAGTGTTAAAT+TGG | - | chr8_1:91116639-91116658 | None:intergenic | 30.0% |
| ! | TGGTGGAATATTTGAAACAT+AGG | - | chr8_1:91116726-91116745 | None:intergenic | 30.0% |
| CATGGAATTTATAGTTATGG+TGG | - | chr8_1:91116743-91116762 | None:intergenic | 30.0% | |
| CATTGAACTACATATCTACA+TGG | - | chr8_1:91116761-91116780 | None:intergenic | 30.0% | |
| TTGGCTTAAGTTTCAGAAAA+AGG | + | chr8_1:91116796-91116815 | Msa1225650:intron | 30.0% | |
| ! | ATAAGACAACACAATGGTTT+TGG | - | chr8_1:91117128-91117147 | None:intergenic | 30.0% |
| TTAGCAATAAGACAACACAA+TGG | - | chr8_1:91117134-91117153 | None:intergenic | 30.0% | |
| ATACAGGGATTACAAAGATT+GGG | + | chr8_1:91117184-91117203 | Msa1225650:CDS | 30.0% | |
| ! | GATTTCAGGTGAAAAAGAAA+TGG | + | chr8_1:91117354-91117373 | Msa1225650:intron | 30.0% |
| ACACGTAGGAAAATTGAATA+AGG | + | chr8_1:91117517-91117536 | Msa1225650:three_prime_UTR | 30.0% | |
| CACGTAGGAAAATTGAATAA+GGG | + | chr8_1:91117518-91117537 | Msa1225650:three_prime_UTR | 30.0% | |
| AGGAAAATTGAATAAGGGAA+AGG | + | chr8_1:91117523-91117542 | Msa1225650:three_prime_UTR | 30.0% | |
| ATCTGATAGTATATAGTGTC+AGG | + | chr8_1:91117573-91117592 | Msa1225650:three_prime_UTR | 30.0% | |
| TAATAGAATCTCTGGACTAA+GGG | - | chr8_1:91117832-91117851 | None:intergenic | 30.0% | |
| TTAATAGAATCTCTGGACTA+AGG | - | chr8_1:91117833-91117852 | None:intergenic | 30.0% | |
| ! | TTCATTTTCACTCACCTTTC+TGG | + | chr8_1:91112488-91112507 | Msa1225650:CDS | 35.0% |
| ! | AATGCAGGAGTTTAGAACAA+GGG | - | chr8_1:91112556-91112575 | None:intergenic | 35.0% |
| ! | AAATGCAGGAGTTTAGAACA+AGG | - | chr8_1:91112557-91112576 | None:intergenic | 35.0% |
| ACCGATTGAACTCAATTACT+TGG | - | chr8_1:91112655-91112674 | None:intergenic | 35.0% | |
| ! | ATTCTTTTCTGTTAGAGCTC+CGG | - | chr8_1:91112771-91112790 | None:intergenic | 35.0% |
| GCACATACATTGTTAGGTAT+CGG | + | chr8_1:91112865-91112884 | Msa1225650:intron | 35.0% | |
| CACATACATTGTTAGGTATC+GGG | + | chr8_1:91112866-91112885 | Msa1225650:intron | 35.0% | |
| !! | ATGCAGTATTTGTGCTGATT+AGG | + | chr8_1:91112969-91112988 | Msa1225650:intron | 35.0% |
| !!! | TTTTTCTCTGGGATTACAGA+GGG | + | chr8_1:91113170-91113189 | Msa1225650:intron | 35.0% |
| GCATCATTCAGTGTAATCAT+AGG | + | chr8_1:91113324-91113343 | Msa1225650:intron | 35.0% | |
| TTCAGTGTAATCATAGGTGT+CGG | + | chr8_1:91113330-91113349 | Msa1225650:intron | 35.0% | |
| ! | ATGTCAGAGCTTTAGTACAT+CGG | + | chr8_1:91113589-91113608 | Msa1225650:intron | 35.0% |
| ATGGCATGTTACCTACAAAA+GGG | - | chr8_1:91113619-91113638 | None:intergenic | 35.0% | |
| TATGGCATGTTACCTACAAA+AGG | - | chr8_1:91113620-91113639 | None:intergenic | 35.0% | |
| GTTCCATTGTGAAACAATGT+TGG | + | chr8_1:91113952-91113971 | Msa1225650:intron | 35.0% | |
| GAGAACATCACAAAAGAACT+CGG | - | chr8_1:91114042-91114061 | None:intergenic | 35.0% | |
| GCAATTAAAAAGACTAGGAC+AGG | - | chr8_1:91114109-91114128 | None:intergenic | 35.0% | |
| GATCTTTCCATAGAAAAGCA+AGG | + | chr8_1:91114136-91114155 | Msa1225650:intron | 35.0% | |
| CTATAAGAGCTTATTGATCC+AGG | - | chr8_1:91114244-91114263 | None:intergenic | 35.0% | |
| CAAAATAGTGAACAAATGCC+AGG | - | chr8_1:91114355-91114374 | None:intergenic | 35.0% | |
| ! | TTTGTTCACTATTTTGCTGC+TGG | + | chr8_1:91114359-91114378 | Msa1225650:intron | 35.0% |
| TAGTGTGATCAACTTTGAGT+TGG | - | chr8_1:91114760-91114779 | None:intergenic | 35.0% | |
| GCTTACACTAAGACATTTAC+TGG | + | chr8_1:91114994-91115013 | Msa1225650:CDS | 35.0% | |
| TCACCTGATACCTATAATAG+TGG | + | chr8_1:91115252-91115271 | Msa1225650:CDS | 35.0% | |
| CCCAGTAAGAAAAAATTCGT+AGG | - | chr8_1:91115643-91115662 | None:intergenic | 35.0% | |
| TCAAAGCTTCCATTTCTGTT+CGG | + | chr8_1:91115913-91115932 | Msa1225650:intron | 35.0% | |
| TAGCTCCATTGTTTATTGGT+CGG | + | chr8_1:91115968-91115987 | Msa1225650:CDS | 35.0% | |
| TGTTGGGTTTATCATCAGTA+AGG | - | chr8_1:91116011-91116030 | None:intergenic | 35.0% | |
| !! | AAAAGAAGGGATGGTTTGTT+GGG | - | chr8_1:91116027-91116046 | None:intergenic | 35.0% |
| AGAAGCCATTCTCAAAAGAA+GGG | - | chr8_1:91116040-91116059 | None:intergenic | 35.0% | |
| ! | ATGTTTTGTAGATCTGCACT+TGG | + | chr8_1:91116160-91116179 | Msa1225650:intron | 35.0% |
| AATGTAGAAACGCAACATGT+TGG | + | chr8_1:91116777-91116796 | Msa1225650:intron | 35.0% | |
| CCTCTGTTAAAAACATCATG+TGG | - | chr8_1:91117159-91117178 | None:intergenic | 35.0% | |
| !! | CCACATGATGTTTTTAACAG+AGG | + | chr8_1:91117156-91117175 | Msa1225650:intron | 35.0% |
| TTTAACAGAGGAGATGATAC+AGG | + | chr8_1:91117168-91117187 | Msa1225650:intron | 35.0% | |
| TTAACAGAGGAGATGATACA+GGG | + | chr8_1:91117169-91117188 | Msa1225650:intron | 35.0% | |
| GATACAGGGATTACAAAGAT+TGG | + | chr8_1:91117183-91117202 | Msa1225650:CDS | 35.0% | |
| CAGTACATGGATGTTACTAT+GGG | - | chr8_1:91117260-91117279 | None:intergenic | 35.0% | |
| ATTCAGAGAAATGCAGTACA+TGG | - | chr8_1:91117273-91117292 | None:intergenic | 35.0% | |
| ATGAGTATTCCTTGGATTTC+AGG | + | chr8_1:91117340-91117359 | Msa1225650:intron | 35.0% | |
| !! | TCTTTTTCACCTGAAATCCA+AGG | - | chr8_1:91117352-91117371 | None:intergenic | 35.0% |
| CAGTAAAGGTTTACGAATGT+GGG | - | chr8_1:91117491-91117510 | None:intergenic | 35.0% | |
| ! | AGAAGAGTGTAAGGTATCTT+TGG | + | chr8_1:91117596-91117615 | Msa1225650:three_prime_UTR | 35.0% |
| AGAACGTGTTTCTCAAACTA+GGG | + | chr8_1:91117646-91117665 | Msa1225650:three_prime_UTR | 35.0% | |
| TTAAGCCATCCAACAAAGAT+TGG | + | chr8_1:91117849-91117868 | Msa1225650:three_prime_UTR | 35.0% | |
| CAAATTGTGACAAGTTCCAG+CGG | - | chr8_1:91112265-91112284 | None:intergenic | 40.0% | |
| !! | GTTCTGGTTCCTTTGCTATA+TGG | + | chr8_1:91112352-91112371 | Msa1225650:exon | 40.0% |
| CTACAACGCGCGTAAATAAA+AGG | - | chr8_1:91112389-91112408 | None:intergenic | 40.0% | |
| GTGAGTGAAAATGAAGCTAG+GGG | - | chr8_1:91112483-91112502 | None:intergenic | 40.0% | |
| GGTGAGTGAAAATGAAGCTA+GGG | - | chr8_1:91112484-91112503 | None:intergenic | 40.0% | |
| AGGTGAGTGAAAATGAAGCT+AGG | - | chr8_1:91112485-91112504 | None:intergenic | 40.0% | |
| CTTACTTGCTTGCCAAACTT+TGG | + | chr8_1:91112720-91112739 | Msa1225650:intron | 40.0% | |
| CTTGCCAAACTTTGGATTGT+CGG | + | chr8_1:91112728-91112747 | Msa1225650:intron | 40.0% | |
| TTGCCAAACTTTGGATTGTC+GGG | + | chr8_1:91112729-91112748 | Msa1225650:intron | 40.0% | |
| !! | ATACATTGTTAGGTATCGGG+TGG | + | chr8_1:91112869-91112888 | Msa1225650:intron | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | + | chr8_1:91113021-91113040 | Msa1225650:intron | 40.0% |
| CTCTCTGCTCAAAACCAATA+AGG | - | chr8_1:91113126-91113145 | None:intergenic | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | + | chr8_1:91113144-91113163 | Msa1225650:intron | 40.0% | |
| !!! | CTTTTTCTCTGGGATTACAG+AGG | + | chr8_1:91113169-91113188 | Msa1225650:intron | 40.0% |
| ! | ATTCGGGTTCCTATCATACA+TGG | + | chr8_1:91113252-91113271 | Msa1225650:intron | 40.0% |
| TTCCTATCATACATGGACAC+CGG | + | chr8_1:91113259-91113278 | Msa1225650:intron | 40.0% | |
| TATGAAGCACATACACTCCT+AGG | - | chr8_1:91113392-91113411 | None:intergenic | 40.0% | |
| AAGGTCACTTGTTCAAGTCT+TGG | + | chr8_1:91113484-91113503 | Msa1225650:intron | 40.0% | |
| CTGTGTCCAATACACCAAAA+TGG | + | chr8_1:91113540-91113559 | Msa1225650:intron | 40.0% | |
| TGTCCAATACACCAAAATGG+TGG | + | chr8_1:91113543-91113562 | Msa1225650:intron | 40.0% | |
| GTCCAATACACCAAAATGGT+GGG | + | chr8_1:91113544-91113563 | Msa1225650:intron | 40.0% | |
| ! | TGTCAGAGCTTTAGTACATC+GGG | + | chr8_1:91113590-91113609 | Msa1225650:intron | 40.0% |
| TACTCATAGCTTCAGCTCTA+AGG | - | chr8_1:91113715-91113734 | None:intergenic | 40.0% | |
| ATCATTCTTCAGATTCCCAG+TGG | - | chr8_1:91113768-91113787 | None:intergenic | 40.0% | |
| ACAAGAACAAGGAGATGATC+AGG | - | chr8_1:91113791-91113810 | None:intergenic | 40.0% | |
| AGATACCATGGACAAGAACA+AGG | - | chr8_1:91113802-91113821 | None:intergenic | 40.0% | |
| TTGTTCTTGTCCATGGTATC+TGG | + | chr8_1:91113801-91113820 | Msa1225650:CDS | 40.0% | |
| ATTACCTAGACCAGATACCA+TGG | - | chr8_1:91113814-91113833 | None:intergenic | 40.0% | |
| TAAAAGATAGTCTGAACGGC+TGG | + | chr8_1:91113870-91113889 | Msa1225650:intron | 40.0% | |
| AAAAAAATGTGCCACGCACA+CGG | - | chr8_1:91114162-91114181 | None:intergenic | 40.0% | |
| !!! | TGTTTTAACTGATACAGCCC+AGG | + | chr8_1:91114411-91114430 | Msa1225650:intron | 40.0% |
| !! | GATCAACTTTGAGTTGGCTA+AGG | - | chr8_1:91114754-91114773 | None:intergenic | 40.0% |
| TTTACTGGGATTGATGAAGC+TGG | + | chr8_1:91115009-91115028 | Msa1225650:CDS | 40.0% | |
| GCATGACCTGTTGTGATAAA+AGG | - | chr8_1:91115137-91115156 | None:intergenic | 40.0% | |
| AAATAGGCCTCCAAGAGAAT+GGG | - | chr8_1:91115205-91115224 | None:intergenic | 40.0% | |
| TGGCCACTATTATAGGTATC+AGG | - | chr8_1:91115258-91115277 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGGCCACTATTAT+AGG | - | chr8_1:91115265-91115284 | None:intergenic | 40.0% |
| !! | TCACAGACAGACTTTTCAAG+AGG | + | chr8_1:91115312-91115331 | Msa1225650:CDS | 40.0% |
| !! | CACAGACAGACTTTTCAAGA+GGG | + | chr8_1:91115313-91115332 | Msa1225650:CDS | 40.0% |
| !! | TTTTCAAGAGGGATGATTGC+TGG | + | chr8_1:91115324-91115343 | Msa1225650:CDS | 40.0% |
| AGCAATGGAAGAGAAAACGA+TGG | - | chr8_1:91115748-91115767 | None:intergenic | 40.0% | |
| TGCATGCAATGAAGATCTTG+TGG | - | chr8_1:91115816-91115835 | None:intergenic | 40.0% | |
| !!! | GCAACAAGCTTTTCTAGGAT+CGG | - | chr8_1:91115943-91115962 | None:intergenic | 40.0% |
| CCAATAAACAATGGAGCTAC+AGG | - | chr8_1:91115967-91115986 | None:intergenic | 40.0% | |
| CCTGTAGCTCCATTGTTTAT+TGG | + | chr8_1:91115964-91115983 | Msa1225650:CDS | 40.0% | |
| ! | CAAAAGAAGGGATGGTTTGT+TGG | - | chr8_1:91116028-91116047 | None:intergenic | 40.0% |
| !! | ACCATCCCTTCTTTTGAGAA+TGG | + | chr8_1:91116032-91116051 | Msa1225650:CDS | 40.0% |
| CAGAAGCCATTCTCAAAAGA+AGG | - | chr8_1:91116041-91116060 | None:intergenic | 40.0% | |
| ! | AGTGTCACTAATACACTGGA+AGG | - | chr8_1:91116234-91116253 | None:intergenic | 40.0% |
| CCACCCAACCATATCTATAT+AGG | - | chr8_1:91116296-91116315 | None:intergenic | 40.0% | |
| CCTATATAGATATGGTTGGG+TGG | + | chr8_1:91116293-91116312 | Msa1225650:intron | 40.0% | |
| AAGTTCGATTTCCCTCCTTA+TGG | - | chr8_1:91116329-91116348 | None:intergenic | 40.0% | |
| ATAAGGAGGGAAATCGAACT+TGG | + | chr8_1:91116328-91116347 | Msa1225650:CDS | 40.0% | |
| AGTAGTTGAACTCCTGAATG+TGG | + | chr8_1:91116499-91116518 | Msa1225650:intron | 40.0% | |
| TGAACTCCTGAATGTGGTTA+AGG | + | chr8_1:91116505-91116524 | Msa1225650:intron | 40.0% | |
| GCATTATAGTCAGGCGTTAT+AGG | - | chr8_1:91116565-91116584 | None:intergenic | 40.0% | |
| AAAGGAAAACACCTGATCTG+TGG | + | chr8_1:91116814-91116833 | Msa1225650:intron | 40.0% | |
| GCTTGTATCCATCCAAAGAT+TGG | - | chr8_1:91116908-91116927 | None:intergenic | 40.0% | |
| AGGGATTACAAAGATTGGGA+TGG | + | chr8_1:91117188-91117207 | Msa1225650:CDS | 40.0% | |
| TCAACTTTCACTCAGCAGTT+TGG | + | chr8_1:91117224-91117243 | Msa1225650:CDS | 40.0% | |
| ATGTTACTATGGGCAAAGAG+AGG | - | chr8_1:91117250-91117269 | None:intergenic | 40.0% | |
| GCAGTACATGGATGTTACTA+TGG | - | chr8_1:91117261-91117280 | None:intergenic | 40.0% | |
| AAGAAATGGCTTCACAATGC+TGG | + | chr8_1:91117368-91117387 | Msa1225650:CDS | 40.0% | |
| CCAGTAAAGGTTTACGAATG+TGG | - | chr8_1:91117492-91117511 | None:intergenic | 40.0% | |
| CCACATTCGTAAACCTTTAC+TGG | + | chr8_1:91117489-91117508 | Msa1225650:three_prime_UTR | 40.0% | |
| CTACGTGTATAGACCAGTAA+AGG | - | chr8_1:91117505-91117524 | None:intergenic | 40.0% | |
| ! | CTTTACTGGTCTATACACGT+AGG | + | chr8_1:91117503-91117522 | Msa1225650:three_prime_UTR | 40.0% |
| GAGAACGTGTTTCTCAAACT+AGG | + | chr8_1:91117645-91117664 | Msa1225650:three_prime_UTR | 40.0% | |
| GAACGTGTTTCTCAAACTAG+GGG | + | chr8_1:91117647-91117666 | Msa1225650:three_prime_UTR | 40.0% | |
| AACGTGTTTCTCAAACTAGG+GGG | + | chr8_1:91117648-91117667 | Msa1225650:three_prime_UTR | 40.0% | |
| GGATGGCTTAATAGAATCTC+TGG | - | chr8_1:91117840-91117859 | None:intergenic | 40.0% | |
| !!! | TGCCTCTTGGTTTTTTAGCA+CGG | - | chr8_1:91117908-91117927 | None:intergenic | 40.0% |
| !! | AAAACCAAGAGGCATCGTTA+CGG | + | chr8_1:91117914-91117933 | Msa1225650:three_prime_UTR | 40.0% |
| AATTGTGAGCCAGATGAGCT+GGG | - | chr8_1:91112182-91112201 | None:intergenic | 45.0% | |
| TGTTATGACACAACAACCGC+TGG | + | chr8_1:91112246-91112265 | Msa1225650:five_prime_UTR | 45.0% | |
| ATGCTGCTGCCATATAGCAA+AGG | - | chr8_1:91112364-91112383 | None:intergenic | 45.0% | |
| AGTGAAAATGAAGCTAGGGG+TGG | - | chr8_1:91112480-91112499 | None:intergenic | 45.0% | |
| GTTCCCGACAATCCAAAGTT+TGG | - | chr8_1:91112735-91112754 | None:intergenic | 45.0% | |
| !! | AGGTATCGGGTGGTATTGAT+AGG | + | chr8_1:91112879-91112898 | Msa1225650:intron | 45.0% |
| !! | GGTATCGGGTGGTATTGATA+GGG | + | chr8_1:91112880-91112899 | Msa1225650:intron | 45.0% |
| !! | TGTGCTGATTAGGAGCAGTT+AGG | + | chr8_1:91112979-91112998 | Msa1225650:intron | 45.0% |
| ACCATTTGGCCACAACAGTA+GGG | + | chr8_1:91113074-91113093 | Msa1225650:intron | 45.0% | |
| !! | TCTCTGAGGAGCTTTTTCTC+TGG | + | chr8_1:91113158-91113177 | Msa1225650:intron | 45.0% |
| !! | CTCTGAGGAGCTTTTTCTCT+GGG | + | chr8_1:91113159-91113178 | Msa1225650:intron | 45.0% |
| !! | TGTAATCATAGGTGTCGGTG+TGG | + | chr8_1:91113335-91113354 | Msa1225650:intron | 45.0% |
| !! | GTAATCATAGGTGTCGGTGT+GGG | + | chr8_1:91113336-91113355 | Msa1225650:intron | 45.0% |
| ATACACTCCTAGGTGTGTCA+CGG | - | chr8_1:91113382-91113401 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTACGTGACAGAA+AGG | + | chr8_1:91113465-91113484 | Msa1225650:intron | 45.0% |
| !! | GTCCCACCATTTTGGTGTAT+TGG | - | chr8_1:91113549-91113568 | None:intergenic | 45.0% |
| ! | AAAAAGGGGTCCCACCATTT+TGG | - | chr8_1:91113557-91113576 | None:intergenic | 45.0% |
| !! | AAATGGTGGGACCCCTTTTT+CGG | + | chr8_1:91113557-91113576 | Msa1225650:intron | 45.0% |
| ! | CTAAAGCTCTGACATACGCA+GGG | - | chr8_1:91113584-91113603 | None:intergenic | 45.0% |
| ! | ACTAAAGCTCTGACATACGC+AGG | - | chr8_1:91113585-91113604 | None:intergenic | 45.0% |
| ATGTTGGAGAGAACTTCTGC+AGG | + | chr8_1:91113662-91113681 | Msa1225650:intron | 45.0% | |
| ACTTCTGCAGGTGCAAACAA+AGG | + | chr8_1:91113674-91113693 | Msa1225650:intron | 45.0% | |
| AGCTATGAGTACTACCACTC+AGG | + | chr8_1:91113724-91113743 | Msa1225650:CDS | 45.0% | |
| GCTATGAGTACTACCACTCA+GGG | + | chr8_1:91113725-91113744 | Msa1225650:CDS | 45.0% | |
| AAGTCTCCTGCTAAAACCAC+TGG | + | chr8_1:91113749-91113768 | Msa1225650:CDS | 45.0% | |
| AGTCTCCTGCTAAAACCACT+GGG | + | chr8_1:91113750-91113769 | Msa1225650:CDS | 45.0% | |
| !!! | AGATTCCCAGTGGTTTTAGC+AGG | - | chr8_1:91113758-91113777 | None:intergenic | 45.0% |
| CATCTCCTTGTTCTTGTCCA+TGG | + | chr8_1:91113794-91113813 | Msa1225650:CDS | 45.0% | |
| TTGTCCATGGTATCTGGTCT+AGG | + | chr8_1:91113807-91113826 | Msa1225650:CDS | 45.0% | |
| CTCATGTGAGCAAGTGTTTG+AGG | + | chr8_1:91114059-91114078 | Msa1225650:intron | 45.0% | |
| TGTACTGTTTGTACCGCAAG+CGG | + | chr8_1:91114327-91114346 | Msa1225650:intron | 45.0% | |
| !!! | GCTGGTTTTTGCTCTCCAAT+TGG | + | chr8_1:91114377-91114396 | Msa1225650:intron | 45.0% |
| TTGGGATGATTGCGTTGTTG+CGG | + | chr8_1:91114712-91114731 | Msa1225650:intron | 45.0% | |
| ! | TTTTTGTCCAATGCAGCGCA+CGG | + | chr8_1:91115079-91115098 | Msa1225650:intron | 45.0% |
| AAGGATATTCGCTTCAGGCT+CGG | - | chr8_1:91115177-91115196 | None:intergenic | 45.0% | |
| CCAGAAAGGATATTCGCTTC+AGG | - | chr8_1:91115182-91115201 | None:intergenic | 45.0% | |
| CCTGAAGCGAATATCCTTTC+TGG | + | chr8_1:91115179-91115198 | Msa1225650:CDS | 45.0% | |
| CAAATAGGCCTCCAAGAGAA+TGG | - | chr8_1:91115206-91115225 | None:intergenic | 45.0% | |
| !! | AGTTTGCTGGATCATCAGGT+TGG | - | chr8_1:91115278-91115297 | None:intergenic | 45.0% |
| ! | TTTTCCATCTCGCAGTTTGC+TGG | - | chr8_1:91115291-91115310 | None:intergenic | 45.0% |
| ACTTTAGCAACTCCGCATCT+TGG | + | chr8_1:91115369-91115388 | Msa1225650:CDS | 45.0% | |
| ATCGGAACACCGAACAGAAA+TGG | - | chr8_1:91115925-91115944 | None:intergenic | 45.0% | |
| CCAGTCCGACCAATAAACAA+TGG | - | chr8_1:91115976-91115995 | None:intergenic | 45.0% | |
| CCATTGTTTATTGGTCGGAC+TGG | + | chr8_1:91115973-91115992 | Msa1225650:CDS | 45.0% | |
| GCCATTCTCAAAAGAAGGGA+TGG | - | chr8_1:91116036-91116055 | None:intergenic | 45.0% | |
| ATGGCTTCTGACTGTGAAGA+TGG | + | chr8_1:91116051-91116070 | Msa1225650:CDS | 45.0% | |
| TTCGATTTCCCTCCTTATGG+AGG | - | chr8_1:91116326-91116345 | None:intergenic | 45.0% | |
| GAGGGAAATCGAACTTGGTA+AGG | + | chr8_1:91116333-91116352 | Msa1225650:CDS | 45.0% | |
| TACACGCCTTAACCACATTC+AGG | - | chr8_1:91116514-91116533 | None:intergenic | 45.0% | |
| AACACCTGATCTGTGGAAGT+TGG | + | chr8_1:91116821-91116840 | Msa1225650:intron | 45.0% | |
| ACACCTGATCTGTGGAAGTT+GGG | + | chr8_1:91116822-91116841 | Msa1225650:intron | 45.0% | |
| TATCCATCCAAAGATTGGCG+TGG | - | chr8_1:91116903-91116922 | None:intergenic | 45.0% | |
| ! | AGTGTCAGGAGAAGAGTGTA+AGG | + | chr8_1:91117587-91117606 | Msa1225650:three_prime_UTR | 45.0% |
| GTCCGTGCTAAAAAACCAAG+AGG | + | chr8_1:91117903-91117922 | Msa1225650:three_prime_UTR | 45.0% | |
| !! | AAACCAAGAGGCATCGTTAC+GGG | + | chr8_1:91117915-91117934 | Msa1225650:three_prime_UTR | 45.0% |
| GTTACGGGCACAAGATCATT+TGG | + | chr8_1:91117930-91117949 | Msa1225650:three_prime_UTR | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | + | chr8_1:91112924-91112943 | Msa1225650:intron | 5.0% |
| !! | TAATATTAATATTAAATATC+TGG | + | chr8_1:91116431-91116450 | Msa1225650:intron | 5.0% |
| CAATTGTGAGCCAGATGAGC+TGG | - | chr8_1:91112183-91112202 | None:intergenic | 50.0% | |
| TGGAGGAAGAAGAGCAACAG+GGG | - | chr8_1:91112460-91112479 | None:intergenic | 50.0% | |
| GTGGAGGAAGAAGAGCAACA+GGG | - | chr8_1:91112461-91112480 | None:intergenic | 50.0% | |
| GAAAATGAAGCTAGGGGTGG+AGG | - | chr8_1:91112477-91112496 | None:intergenic | 50.0% | |
| GACCATTTGGCCACAACAGT+AGG | + | chr8_1:91113073-91113092 | Msa1225650:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | + | chr8_1:91113075-91113094 | Msa1225650:intron | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | + | chr8_1:91113076-91113095 | Msa1225650:intron | 50.0% | |
| CTGAATTCCCCCTACTGTTG+TGG | - | chr8_1:91113086-91113105 | None:intergenic | 50.0% | |
| GTCCGGTGTCCATGTATGAT+AGG | - | chr8_1:91113264-91113283 | None:intergenic | 50.0% | |
| ATCATACATGGACACCGGAC+AGG | + | chr8_1:91113264-91113283 | Msa1225650:intron | 50.0% | |
| AGACTGTGTCGCATTCTCTC+TGG | + | chr8_1:91113411-91113430 | Msa1225650:intron | 50.0% | |
| GACTGTGTCGCATTCTCTCT+GGG | + | chr8_1:91113412-91113431 | Msa1225650:intron | 50.0% | |
| ACTGTGTCGCATTCTCTCTG+GGG | + | chr8_1:91113413-91113432 | Msa1225650:intron | 50.0% | |
| ATACGCAGGGTCCGAAAAAG+GGG | - | chr8_1:91113571-91113590 | None:intergenic | 50.0% | |
| CATACGCAGGGTCCGAAAAA+GGG | - | chr8_1:91113572-91113591 | None:intergenic | 50.0% | |
| ACATACGCAGGGTCCGAAAA+AGG | - | chr8_1:91113573-91113592 | None:intergenic | 50.0% | |
| AAGATAGTCTGAACGGCTGG+TGG | + | chr8_1:91113873-91113892 | Msa1225650:intron | 50.0% | |
| !! | CACACGGCCTTGCTTTTCTA+TGG | - | chr8_1:91114146-91114165 | None:intergenic | 50.0% |
| ! | TCCTTTCTGGCCCATTCTCT+TGG | + | chr8_1:91115192-91115211 | Msa1225650:CDS | 50.0% |
| TCCAAGAGAATGGGCCAGAA+AGG | - | chr8_1:91115196-91115215 | None:intergenic | 50.0% | |
| ! | TTTCTGGCCCATTCTCTTGG+AGG | + | chr8_1:91115195-91115214 | Msa1225650:CDS | 50.0% |
| !! | TCGCAGTTTGCTGGATCATC+AGG | - | chr8_1:91115282-91115301 | None:intergenic | 50.0% |
| TGATCCAGCAAACTGCGAGA+TGG | + | chr8_1:91115284-91115303 | Msa1225650:CDS | 50.0% | |
| AAGAGGGATGATTGCTGGAC+TGG | + | chr8_1:91115329-91115348 | Msa1225650:CDS | 50.0% | |
| TTCCCTCTTACGCCAAGATG+CGG | - | chr8_1:91115384-91115403 | None:intergenic | 50.0% | |
| ! | CAGGCGCAACAAGCTTTTCT+AGG | - | chr8_1:91115948-91115967 | None:intergenic | 50.0% |
| CTTCCCAACTTCCACAGATC+AGG | - | chr8_1:91116828-91116847 | None:intergenic | 50.0% | |
| CTGATCTGTGGAAGTTGGGA+AGG | + | chr8_1:91116826-91116845 | Msa1225650:intron | 50.0% | |
| AGGTCCATCGGAAGGAATTG+GGG | - | chr8_1:91116955-91116974 | None:intergenic | 50.0% | |
| GAGGTCCATCGGAAGGAATT+GGG | - | chr8_1:91116956-91116975 | None:intergenic | 50.0% | |
| TGAGGTCCATCGGAAGGAAT+TGG | - | chr8_1:91116957-91116976 | None:intergenic | 50.0% | |
| GGAAATTGAGGTCCATCGGA+AGG | - | chr8_1:91116963-91116982 | None:intergenic | 50.0% | |
| CGGAGGAAATTGAGGTCCAT+CGG | - | chr8_1:91116967-91116986 | None:intergenic | 50.0% | |
| CGATGGACCTCAATTTCCTC+CGG | + | chr8_1:91116965-91116984 | Msa1225650:CDS | 50.0% | |
| TCCTTTGCTTTCACTGCCTC+CGG | - | chr8_1:91116987-91117006 | None:intergenic | 50.0% | |
| TGGCTTCACAATGCTGGTGT+AGG | + | chr8_1:91117374-91117393 | Msa1225650:CDS | 50.0% | |
| AGCAACTTGTGGTTCCAACG+CGG | - | chr8_1:91117875-91117894 | None:intergenic | 50.0% | |
| GACTCAACAGCAGCAACTTG+TGG | - | chr8_1:91117886-91117905 | None:intergenic | 50.0% | |
| GGAGGAAGAAGAGCAACAGG+GGG | - | chr8_1:91112459-91112478 | None:intergenic | 55.0% | |
| GGTGGAGGAAGAAGAGCAAC+AGG | - | chr8_1:91112462-91112481 | None:intergenic | 55.0% | |
| CTGTTAGAGCTCCGGTTCAG+CGG | - | chr8_1:91112763-91112782 | None:intergenic | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | - | chr8_1:91113078-91113097 | None:intergenic | 55.0% | |
| CACCGGACAGGACACAAACA+CGG | + | chr8_1:91113276-91113295 | Msa1225650:intron | 55.0% | |
| GTCCGTGTTTGTGTCCTGTC+CGG | - | chr8_1:91113281-91113300 | None:intergenic | 55.0% | |
| !! | ATAGGTGTCGGTGTGGGACA+CGG | + | chr8_1:91113342-91113361 | Msa1225650:intron | 55.0% |
| TCCTAGGTGTGTCACGGTGT+CGG | - | chr8_1:91113376-91113395 | None:intergenic | 55.0% | |
| CTGTGTCGCATTCTCTCTGG+GGG | + | chr8_1:91113414-91113433 | Msa1225650:intron | 55.0% | |
| TGTGTCGCATTCTCTCTGGG+GGG | + | chr8_1:91113415-91113434 | Msa1225650:intron | 55.0% | |
| ! | ACATCGGGCTGCCCTTTTGT+AGG | + | chr8_1:91113605-91113624 | Msa1225650:intron | 55.0% |
| AGCAGGAGACTTTCCCTGAG+TGG | - | chr8_1:91113741-91113760 | None:intergenic | 55.0% | |
| ACTGATACAGCCCAGGTGAC+TGG | + | chr8_1:91114418-91114437 | Msa1225650:intron | 55.0% | |
| CCGCATAACTCCAGTCACCT+GGG | - | chr8_1:91114431-91114450 | None:intergenic | 55.0% | |
| CCCAGGTGACTGGAGTTATG+CGG | + | chr8_1:91114428-91114447 | Msa1225650:CDS | 55.0% | |
| TCCGCATAACTCCAGTCACC+TGG | - | chr8_1:91114432-91114451 | None:intergenic | 55.0% | |
| AGGTGACTGGAGTTATGCGG+AGG | + | chr8_1:91114431-91114450 | Msa1225650:CDS | 55.0% | |
| TTCAGAACCGTGCGCTGCAT+TGG | - | chr8_1:91115089-91115108 | None:intergenic | 55.0% | |
| ACTCCGCATCTTGGCGTAAG+AGG | + | chr8_1:91115378-91115397 | Msa1225650:CDS | 55.0% | |
| CTCCGCATCTTGGCGTAAGA+GGG | + | chr8_1:91115379-91115398 | Msa1225650:CDS | 55.0% | |
| AAGATTGGCGTGGAGGCTGT+CGG | - | chr8_1:91116893-91116912 | None:intergenic | 55.0% | |
| ACAGCCTCCACGCCAATCTT+TGG | + | chr8_1:91116893-91116912 | Msa1225650:intron | 55.0% | |
| CCATCCAAAGATTGGCGTGG+AGG | - | chr8_1:91116900-91116919 | None:intergenic | 55.0% | |
| CCTCCACGCCAATCTTTGGA+TGG | + | chr8_1:91116897-91116916 | Msa1225650:CDS | 55.0% | |
| TGTCCCCCAATTCCTTCCGA+TGG | + | chr8_1:91116948-91116967 | Msa1225650:CDS | 55.0% | |
| GGTCCATCGGAAGGAATTGG+GGG | - | chr8_1:91116954-91116973 | None:intergenic | 55.0% | |
| TGGACCTCAATTTCCTCCGG+AGG | + | chr8_1:91116968-91116987 | Msa1225650:CDS | 55.0% | |
| ACTGCCTCCGGAGGAAATTG+AGG | - | chr8_1:91116975-91116994 | None:intergenic | 55.0% | |
| TTTGCTTTCACTGCCTCCGG+AGG | - | chr8_1:91116984-91117003 | None:intergenic | 55.0% | |
| TCCGGAGGCAGTGAAAGCAA+AGG | + | chr8_1:91116983-91117002 | Msa1225650:CDS | 55.0% | |
| CGCGGCCAATCTTTGTTGGA+TGG | - | chr8_1:91117857-91117876 | None:intergenic | 55.0% | |
| CCAACGCGGCCAATCTTTGT+TGG | - | chr8_1:91117861-91117880 | None:intergenic | 55.0% | |
| ! | CCAACAAAGATTGGCCGCGT+TGG | + | chr8_1:91117858-91117877 | Msa1225650:three_prime_UTR | 55.0% |
| ATGGCCACCGCCTACCAATC+AGG | - | chr8_1:91112159-91112178 | None:intergenic | 60.0% | |
| GTGAGCCAGATGAGCTGGGA+TGG | - | chr8_1:91112178-91112197 | None:intergenic | 60.0% | |
| CAGGGGGAGGATGAGGAAGA+AGG | - | chr8_1:91112443-91112462 | None:intergenic | 60.0% | |
| AGAGCAACAGGGGGAGGATG+AGG | - | chr8_1:91112450-91112469 | None:intergenic | 60.0% | |
| GGAAGAAGAGCAACAGGGGG+AGG | - | chr8_1:91112456-91112475 | None:intergenic | 60.0% | |
| GGGAACCCTTTCCGCTGAAC+CGG | + | chr8_1:91112749-91112768 | Msa1225650:intron | 60.0% | |
| GAGCTCCGGTTCAGCGGAAA+GGG | - | chr8_1:91112757-91112776 | None:intergenic | 60.0% | |
| AGAGCTCCGGTTCAGCGGAA+AGG | - | chr8_1:91112758-91112777 | None:intergenic | 60.0% | |
| TCCGACACCGTGACACACCT+AGG | + | chr8_1:91113372-91113391 | Msa1225650:intron | 60.0% | |
| ! | GTGTCGCATTCTCTCTGGGG+GGG | + | chr8_1:91113416-91113435 | Msa1225650:intron | 60.0% |
| ! | TGTCGCATTCTCTCTGGGGG+GGG | + | chr8_1:91113417-91113436 | Msa1225650:intron | 60.0% |
| GAAAAGCAAGGCCGTGTGCG+TGG | + | chr8_1:91114148-91114167 | Msa1225650:intron | 60.0% | |
| TTTGTACCGCAAGCGGTGCC+TGG | + | chr8_1:91114334-91114353 | Msa1225650:intron | 60.0% | |
| ! | CAAATGCCAGGCACCGCTTG+CGG | - | chr8_1:91114343-91114362 | None:intergenic | 60.0% |
| !! | GCAGCGCACGGTTCTGAATC+AGG | + | chr8_1:91115091-91115110 | Msa1225650:intron | 60.0% |
| GCGCACGTCCTCCATAAGGA+GGG | + | chr8_1:91116315-91116334 | Msa1225650:CDS | 60.0% | |
| GTGCCCGTAACGATGCCTCT+TGG | - | chr8_1:91117921-91117940 | None:intergenic | 60.0% | |
| GGTGGCCATCCCAGCTCATC+TGG | + | chr8_1:91112170-91112189 | Msa1225650:five_prime_UTR | 65.0% | |
| ! | GTCGCATTCTCTCTGGGGGG+GGG | + | chr8_1:91113418-91113437 | Msa1225650:intron | 65.0% |
| ! | TCGCATTCTCTCTGGGGGGG+GGG | + | chr8_1:91113419-91113438 | Msa1225650:intron | 65.0% |
| GGTGGCGCACGTCCTCCATA+AGG | + | chr8_1:91116311-91116330 | Msa1225650:CDS | 65.0% | |
| GGCGCACGTCCTCCATAAGG+AGG | + | chr8_1:91116314-91116333 | Msa1225650:CDS | 65.0% | |
| ! | CGCATTCTCTCTGGGGGGGG+GGG | + | chr8_1:91113420-91113439 | Msa1225650:intron | 70.0% |
| ! | GCATTCTCTCTGGGGGGGGG+GGG | + | chr8_1:91113421-91113440 | Msa1225650:intron | 70.0% |
| ! | CATTCTCTCTGGGGGGGGGG+GGG | + | chr8_1:91113422-91113441 | Msa1225650:intron | 70.0% |
| ! | ATTCTCTCTGGGGGGGGGGG+GGG | + | chr8_1:91113423-91113442 | Msa1225650:intron | 70.0% |
| ! | TTCTCTCTGGGGGGGGGGGG+GGG | + | chr8_1:91113424-91113443 | Msa1225650:intron | 75.0% |
| GGGGGGGGGTCTTGGCGCAA+CGG | + | chr8_1:91113438-91113457 | Msa1225650:intron | 75.0% | |
| ! | CTGGGGGGGGGGGGGGGTCT+TGG | + | chr8_1:91113430-91113449 | Msa1225650:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 91112154 | 91117970 | 91112154 | ID=Msa1225650;Name=Msa1225650 |
| chr8_1 | mRNA | 91112154 | 91117970 | 91112154 | ID=Msa1225650-mRNA-1;Parent=Msa1225650;Name=Msa1225650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=217|1|1|1|0.9|0.81|11|507|438 |
| chr8_1 | exon | 91112154 | 91112509 | 91112154 | ID=Msa1225650-mRNA-1:exon:33258;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91113684 | 91113828 | 91113684 | ID=Msa1225650-mRNA-1:exon:33259;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91114428 | 91114495 | 91114428 | ID=Msa1225650-mRNA-1:exon:33260;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91114980 | 91115050 | 91114980 | ID=Msa1225650-mRNA-1:exon:33261;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91115150 | 91115410 | 91115150 | ID=Msa1225650-mRNA-1:exon:33262;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91115919 | 91116082 | 91115919 | ID=Msa1225650-mRNA-1:exon:33263;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91116171 | 91116226 | 91116171 | ID=Msa1225650-mRNA-1:exon:33264;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91116302 | 91116354 | 91116302 | ID=Msa1225650-mRNA-1:exon:33265;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91116897 | 91117056 | 91116897 | ID=Msa1225650-mRNA-1:exon:33266;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91117176 | 91117273 | 91117176 | ID=Msa1225650-mRNA-1:exon:33267;Parent=Msa1225650-mRNA-1 |
| chr8_1 | exon | 91117362 | 91117970 | 91117362 | ID=Msa1225650-mRNA-1:exon:33268;Parent=Msa1225650-mRNA-1 |
| chr8_1 | five_prime_UTR | 91112154 | 91112370 | 91112154 | ID=Msa1225650-mRNA-1:five_prime_utr;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91112371 | 91112509 | 91112371 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91113684 | 91113828 | 91113684 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91114428 | 91114495 | 91114428 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91114980 | 91115050 | 91114980 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91115150 | 91115410 | 91115150 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91115919 | 91116082 | 91115919 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91116171 | 91116226 | 91116171 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91116302 | 91116354 | 91116302 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91116897 | 91117056 | 91116897 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91117176 | 91117273 | 91117176 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | CDS | 91117362 | 91117463 | 91117362 | ID=Msa1225650-mRNA-1:cds;Parent=Msa1225650-mRNA-1 |
| chr8_1 | three_prime_UTR | 91117464 | 91117970 | 91117464 | ID=Msa1225650-mRNA-1:three_prime_utr;Parent=Msa1225650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
