AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323260 MtrunA17_Chr4g0054331 91.275 149 13 0 1 149 1 149 2.31e-96 286
Msa1323260 MtrunA17_Chr4g0054331 96.364 110 4 0 233 342 141 250 5.52e-74 229
Msa1323260 MtrunA17_Chr7g0263551 30.519 154 95 4 2 148 4 152 2.56e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323260 AT5G65840.1 72.973 111 30 0 233 343 165 275 3.30e-54 179
Msa1323260 AT5G65840.1 69.231 104 29 1 49 149 70 173 7.90e-42 147

Find 96 sgRNAs with CRISPR-Local

Find 562 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTGAAGGTATTAGATTT+TGG 0.154519 8_4:+31467898 None:intergenic
CTGTCATGTTCAAAGATCTT+TGG 0.216394 8_4:-31467756 Msa1323260:CDS
CAGAAAGAACTCGTTTGTTT+TGG 0.228047 8_4:+31467860 None:intergenic
AGGGGTAAGTGTGTGAATTC+GGG 0.243170 8_4:+31467941 None:intergenic
TTTGTAATTTATACAGTTAT+TGG 0.247744 8_4:-31464092 Msa1323260:three_prime_UTR
GAGGGGTAAGTGTGTGAATT+CGG 0.256228 8_4:+31467940 None:intergenic
TTCACACTCTCATCTATTCT+AGG 0.269138 8_4:-31468049 Msa1323260:five_prime_UTR
AGCAAGAATACGAGCTTTAT+TGG 0.271846 8_4:+31466843 None:intergenic
TACACTGGCTGGGTTGAAAA+AGG 0.282027 8_4:+31464730 None:intergenic
GCAAGAATACGAGCTTTATT+GGG 0.301563 8_4:+31466844 None:intergenic
CTGAAACCACATTCAGTTAC+TGG 0.306925 8_4:-31468140 None:intergenic
TTGTAAATTCGCTTAGCATT+AGG 0.320531 8_4:-31464239 Msa1323260:three_prime_UTR
TTTGACCTCTACTATGGATT+TGG 0.321070 8_4:-31464758 Msa1323260:CDS
TTGTAATTTATACAGTTATT+GGG 0.324930 8_4:-31464091 Msa1323260:three_prime_UTR
AGCTGCATCAAACCTTGATT+TGG 0.325737 8_4:+31466900 None:intergenic
TGTAATATGCTGTGGATATA+TGG 0.335742 8_4:-31464152 Msa1323260:three_prime_UTR
TGTCATGTTCAAAGATCTTT+GGG 0.351307 8_4:-31467755 Msa1323260:CDS
TGTTCTTCTTAGTTGGGAAC+TGG 0.353355 8_4:-31466941 Msa1323260:intron
GGAGGGATGTTTGTGTTTAG+AGG 0.357019 8_4:-31464374 Msa1323260:CDS
TAGATGAGAGTGTGAATTGA+AGG 0.403806 8_4:+31468056 None:intergenic
GTTCAAAGATCTTTGGGATC+AGG 0.419236 8_4:-31467749 Msa1323260:CDS
TAAAGACAATCCATTGGAAA+TGG 0.422792 8_4:+31464897 None:intergenic
AAGGTAAAGCTTACACTGGC+TGG 0.424360 8_4:+31464719 None:intergenic
GGTGTAGTGAAGGGTAGAGG+AGG 0.430839 8_4:+31467921 None:intergenic
GCCTAGATTCTCTGCAATAG+TGG 0.432681 8_4:+31467810 None:intergenic
CTGCTGGAAGGATTCATTGC+GGG 0.437132 8_4:-31465684 Msa1323260:CDS
AGTGGGGATGTAGGTTGGAC+AGG 0.444490 8_4:-31465737 Msa1323260:CDS
TGGGGTGTAGTGAAGGGTAG+AGG 0.444493 8_4:+31467918 None:intergenic
ATACAGTACAGTTAAGCAAC+AGG 0.447939 8_4:+31464266 None:intergenic
CCGTGCATTACCTTACGGTC+AGG 0.448777 8_4:+31464867 None:intergenic
ATCATCCATACTGCTATCCT+TGG 0.453494 8_4:+31465073 None:intergenic
AGATCTTTGGGATCAGGAAC+AGG 0.458429 8_4:-31467743 Msa1323260:intron
AATTGTATTCACAAGACTGC+TGG 0.459882 8_4:-31465700 Msa1323260:CDS
CTTGTATGATTCACAGTGAA+TGG 0.465733 8_4:+31464183 None:intergenic
TGTAGTGAAGGGTAGAGGAG+GGG 0.466733 8_4:+31467923 None:intergenic
CCCACTATTGCAGAGAATCT+AGG 0.467316 8_4:-31467811 Msa1323260:CDS
TTAAAGCCTCATAATTCCCT+AGG 0.467609 8_4:+31466767 None:intergenic
ATTTGCCAAGGATAGCAGTA+TGG 0.471309 8_4:-31465078 Msa1323260:CDS
CAGTGTTTGACTGTTTCCCT+AGG 0.482163 8_4:-31466784 Msa1323260:CDS
CATTGAAAGAATCCAAATCA+AGG 0.492034 8_4:-31466912 Msa1323260:CDS
GCCGATGAATGAAGATTTGA+AGG 0.493342 8_4:+31467885 None:intergenic
GAGGGATGTTTGTGTTTAGA+GGG 0.508209 8_4:-31464373 Msa1323260:CDS
GTATCGTGGGTTCAGGAAGT+GGG 0.514756 8_4:-31465754 Msa1323260:intron
TGTTCAGTTACCATTTCCAA+TGG 0.515281 8_4:-31464907 Msa1323260:intron
TGTTTCCCTAGGGAATTATG+AGG 0.515650 8_4:-31466773 Msa1323260:CDS
AGTGTTTGACTGTTTCCCTA+GGG 0.517627 8_4:-31466783 Msa1323260:CDS
GTGTAGTGAAGGGTAGAGGA+GGG 0.519108 8_4:+31467922 None:intergenic
ACCTTCAAATCTTCATTCAT+CGG 0.522192 8_4:-31467886 Msa1323260:CDS
AAATCAAGGTTTGATGCAGC+TGG 0.524810 8_4:-31466898 Msa1323260:CDS
AAAACACCACTTCTATCATC+TGG 0.525139 8_4:+31464506 None:intergenic
TCAAAATCAGAACAAATCAA+TGG 0.525218 8_4:-31468013 Msa1323260:exon
CAGGAAGTGGGGATGTAGGT+TGG 0.525590 8_4:-31465742 Msa1323260:CDS
CGTGCATTACCTTACGGTCA+GGG 0.525659 8_4:+31464868 None:intergenic
TCACACTCTCATCTATTCTA+GGG 0.529011 8_4:-31468048 Msa1323260:five_prime_UTR
GTGGGGATGTAGGTTGGACA+GGG 0.539416 8_4:-31465736 Msa1323260:CDS
GGTTCAGGAAGTGGGGATGT+AGG 0.544894 8_4:-31465746 Msa1323260:intron
AAGCTAATTGCAGTGGGCGT+TGG 0.548964 8_4:-31466871 Msa1323260:CDS
GGGGTAAGTGTGTGAATTCG+GGG 0.552268 8_4:+31467942 None:intergenic
TTCTTCTTTCTTTGCCAGTG+AGG 0.554138 8_4:+31465632 None:intergenic
TAAAGCCTCATAATTCCCTA+GGG 0.554916 8_4:+31466768 None:intergenic
AGGTAAAGCTTACACTGGCT+GGG 0.557305 8_4:+31464720 None:intergenic
ATCGATGAACAGATCCTCAC+TGG 0.559993 8_4:-31465646 Msa1323260:CDS
CAAAGAAAGAAGAATGTGGC+TGG 0.565162 8_4:-31465623 Msa1323260:intron
TTATGCAGACCCTGACCGTA+AGG 0.565546 8_4:-31464877 Msa1323260:intron
GGTGTGATAGATGGATGAAA+AGG 0.565786 8_4:+31467964 None:intergenic
AGATCATTAGTTACCAGCAT+GGG 0.566257 8_4:+31467035 None:intergenic
GGAAAGAGCTATTATATGCA+AGG 0.568553 8_4:-31464352 Msa1323260:CDS
CAAGAATACGAGCTTTATTG+GGG 0.569412 8_4:+31466845 None:intergenic
CCTAGATTCTCTGCAATAGT+GGG 0.580863 8_4:+31467811 None:intergenic
GCAAGGAAAGACGAAGGCAC+AGG 0.589567 8_4:-31464335 Msa1323260:CDS
TCTGCATAAAGACAATCCAT+TGG 0.596451 8_4:+31464891 None:intergenic
TCTGTGTTGCAAATTTGCCA+AGG 0.610759 8_4:-31465090 Msa1323260:CDS
TGGTGTCAAGCTAATTGCAG+TGG 0.616794 8_4:-31466878 Msa1323260:CDS
TGAAATGACAAAGGAGGACA+AGG 0.621292 8_4:+31466805 None:intergenic
ATTCTTACAGGGAATAGCTG+TGG 0.623503 8_4:-31467083 Msa1323260:intron
AGTGAGGATCTGTTCATCGA+TGG 0.624580 8_4:+31465648 None:intergenic
CTGGCAAAGAAAGAAGAATG+TGG 0.624811 8_4:-31465627 Msa1323260:CDS
AAGATCATTAGTTACCAGCA+TGG 0.626138 8_4:+31467034 None:intergenic
GCCACTCCAGATGATAGAAG+TGG 0.626798 8_4:-31464512 Msa1323260:CDS
GGTGTCAAGCTAATTGCAGT+GGG 0.627555 8_4:-31466877 Msa1323260:CDS
ACCACTTCTATCATCTGGAG+TGG 0.632768 8_4:+31464511 None:intergenic
TTCGGCCAAATCCATAGTAG+AGG 0.635276 8_4:+31464753 None:intergenic
GGGTAAGTGTGTGAATTCGG+GGG 0.635427 8_4:+31467943 None:intergenic
CTTACAGGGAATAGCTGTGG+TGG 0.639248 8_4:-31467080 Msa1323260:intron
GTCAAACACTGAAATGACAA+AGG 0.639779 8_4:+31466796 None:intergenic
TATCGTGGGTTCAGGAAGTG+GGG 0.643186 8_4:-31465753 Msa1323260:intron
GTATTCACAAGACTGCTGGA+AGG 0.643788 8_4:-31465696 Msa1323260:CDS
ACCACATTCAGTTACTGGCG+TGG 0.648313 8_4:-31468135 None:intergenic
CCCGCCACTGAAAATATCCG+TGG 0.667448 8_4:-31468096 Msa1323260:five_prime_UTR
TAGCTGTGAAGAGAGAGCCA+CGG 0.678890 8_4:+31468079 None:intergenic
GGTTGGACAGGGAAAGACTG+TGG 0.680938 8_4:-31465725 Msa1323260:CDS
ATGCAACATGTAATATGCTG+TGG 0.686630 8_4:-31464160 Msa1323260:three_prime_UTR
AAACACTGAAATGACAAAGG+AGG 0.688107 8_4:+31466799 None:intergenic
TTATATGCAAGGAAAGACGA+AGG 0.699801 8_4:-31464341 Msa1323260:CDS
ACTGCTGGAAGGATTCATTG+CGG 0.724896 8_4:-31465685 Msa1323260:CDS
AAGAATACGAGCTTTATTGG+GGG 0.731789 8_4:+31466846 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAAATAAAGTTAAAT+TGG - chr8_4:31464890-31464909 Msa1323260:CDS 10.0%
!!! TTTTATACTTTTCTTTATTA+AGG + chr8_4:31465945-31465964 None:intergenic 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG + chr8_4:31466953-31466972 None:intergenic 10.0%
!! AAGATAAAATAAAGTTAAAT+TGG - chr8_4:31464890-31464909 Msa1323260:CDS 10.0%
!!! TTTTATACTTTTCTTTATTA+AGG + chr8_4:31465945-31465964 None:intergenic 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG + chr8_4:31466953-31466972 None:intergenic 10.0%
!!! TTTTTACTCTTTAAATGTTT+TGG - chr8_4:31464486-31464505 Msa1323260:intron 15.0%
!!! TTTTACTCTTTAAATGTTTT+GGG - chr8_4:31464487-31464506 Msa1323260:intron 15.0%
!!! ACATCACAATTTTTTTTTTT+TGG - chr8_4:31464511-31464530 Msa1323260:CDS 15.0%
!! GAATTGAAATTAATTTATTC+TGG - chr8_4:31464703-31464722 Msa1323260:intron 15.0%
!! ATTTATTATTTATCCAAGTA+AGG + chr8_4:31464813-31464832 None:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG + chr8_4:31466838-31466857 None:intergenic 15.0%
!! TAATTTACGCAATTATTATA+TGG - chr8_4:31467182-31467201 Msa1323260:intron 15.0%
!!! TAATATTTTACTTTACAACT+TGG - chr8_4:31467738-31467757 Msa1323260:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG - chr8_4:31467739-31467758 Msa1323260:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG + chr8_4:31467768-31467787 None:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG - chr8_4:31468080-31468099 Msa1323260:five_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG - chr8_4:31468081-31468100 Msa1323260:five_prime_UTR 15.0%
!!! TTTTTACTCTTTAAATGTTT+TGG - chr8_4:31464486-31464505 Msa1323260:intron 15.0%
!!! TTTTACTCTTTAAATGTTTT+GGG - chr8_4:31464487-31464506 Msa1323260:intron 15.0%
!!! ACATCACAATTTTTTTTTTT+TGG - chr8_4:31464511-31464530 Msa1323260:CDS 15.0%
!! GAATTGAAATTAATTTATTC+TGG - chr8_4:31464703-31464722 Msa1323260:intron 15.0%
!! ATTTATTATTTATCCAAGTA+AGG + chr8_4:31464813-31464832 None:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG + chr8_4:31466838-31466857 None:intergenic 15.0%
!! TAATTTACGCAATTATTATA+TGG - chr8_4:31467182-31467201 Msa1323260:intron 15.0%
!!! TAATATTTTACTTTACAACT+TGG - chr8_4:31467738-31467757 Msa1323260:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG - chr8_4:31467739-31467758 Msa1323260:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG + chr8_4:31467768-31467787 None:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG - chr8_4:31468080-31468099 Msa1323260:five_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG - chr8_4:31468081-31468100 Msa1323260:five_prime_UTR 15.0%
!!! ATTTGAAGGTATTAGATTTT+GGG + chr8_4:31464276-31464295 None:intergenic 20.0%
!!! AATTAGTTGAAATTGATTTG+AGG - chr8_4:31464618-31464637 Msa1323260:intron 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG - chr8_4:31464650-31464669 Msa1323260:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG + chr8_4:31465022-31465041 None:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG - chr8_4:31465033-31465052 Msa1323260:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG + chr8_4:31465512-31465531 None:intergenic 20.0%
!! TATTATTGTAAGTAAAGACA+TGG - chr8_4:31465639-31465658 Msa1323260:CDS 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG + chr8_4:31465779-31465798 None:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG - chr8_4:31465798-31465817 Msa1323260:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG - chr8_4:31465888-31465907 Msa1323260:intron 20.0%
!!! TAATTTGTATATTGGCAATT+TGG + chr8_4:31466024-31466043 None:intergenic 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG - chr8_4:31466176-31466195 Msa1323260:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG + chr8_4:31466335-31466354 None:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG - chr8_4:31466335-31466354 Msa1323260:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG + chr8_4:31466365-31466384 None:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG + chr8_4:31466666-31466685 None:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG - chr8_4:31466985-31467004 Msa1323260:intron 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG - chr8_4:31467052-31467071 Msa1323260:CDS 20.0%
!! TTTAAATTCACTTCATTGAA+GGG - chr8_4:31467053-31467072 Msa1323260:CDS 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG - chr8_4:31467776-31467795 Msa1323260:CDS 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG - chr8_4:31467777-31467796 Msa1323260:CDS 20.0%
!!! ATTTGAAGGTATTAGATTTT+GGG + chr8_4:31464276-31464295 None:intergenic 20.0%
!!! AATTAGTTGAAATTGATTTG+AGG - chr8_4:31464618-31464637 Msa1323260:intron 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG - chr8_4:31464650-31464669 Msa1323260:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG + chr8_4:31465022-31465041 None:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG - chr8_4:31465033-31465052 Msa1323260:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG + chr8_4:31465512-31465531 None:intergenic 20.0%
!! TATTATTGTAAGTAAAGACA+TGG - chr8_4:31465639-31465658 Msa1323260:CDS 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG + chr8_4:31465779-31465798 None:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG - chr8_4:31465798-31465817 Msa1323260:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG - chr8_4:31465888-31465907 Msa1323260:intron 20.0%
!!! TAATTTGTATATTGGCAATT+TGG + chr8_4:31466024-31466043 None:intergenic 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG - chr8_4:31466176-31466195 Msa1323260:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG + chr8_4:31466335-31466354 None:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG - chr8_4:31466335-31466354 Msa1323260:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG + chr8_4:31466365-31466384 None:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG + chr8_4:31466666-31466685 None:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG - chr8_4:31466985-31467004 Msa1323260:intron 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG - chr8_4:31467052-31467071 Msa1323260:CDS 20.0%
!! TTTAAATTCACTTCATTGAA+GGG - chr8_4:31467053-31467072 Msa1323260:CDS 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG - chr8_4:31467776-31467795 Msa1323260:CDS 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG - chr8_4:31467777-31467796 Msa1323260:CDS 20.0%
! TCAAAATCAGAACAAATCAA+TGG - chr8_4:31464159-31464178 Msa1323260:three_prime_UTR 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG + chr8_4:31464275-31464294 None:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG + chr8_4:31464277-31464296 None:intergenic 25.0%
!!! TTTTTTTTGGACCTAAATTG+TGG - chr8_4:31464524-31464543 Msa1323260:CDS 25.0%
! TAAAGCAAAAACCACAATTT+AGG + chr8_4:31464538-31464557 None:intergenic 25.0%
!! AAATTGTGGTTTTTGCTTTA+TGG - chr8_4:31464538-31464557 Msa1323260:CDS 25.0%
!!! TTTGAGGTTGATATATTAGT+TGG - chr8_4:31464634-31464653 Msa1323260:intron 25.0%
!!! AATAGGTTGATGTTAATATG+TGG - chr8_4:31465050-31465069 Msa1323260:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG - chr8_4:31465077-31465096 Msa1323260:CDS 25.0%
! GATTAGAGTTAATTCTTACA+GGG - chr8_4:31465078-31465097 Msa1323260:CDS 25.0%
!! ATTAATAACCAAAAGCACAA+AGG + chr8_4:31465166-31465185 None:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG - chr8_4:31465166-31465185 Msa1323260:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG + chr8_4:31465591-31465610 None:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG - chr8_4:31465914-31465933 Msa1323260:intron 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG + chr8_4:31466032-31466051 None:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG - chr8_4:31466031-31466050 Msa1323260:intron 25.0%
! ATATACAAATTAAGCACACA+GGG - chr8_4:31466032-31466051 Msa1323260:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG - chr8_4:31466070-31466089 Msa1323260:intron 25.0%
! AAATATAAGTATGCCAATAG+TGG - chr8_4:31466116-31466135 Msa1323260:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG + chr8_4:31466166-31466185 None:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG + chr8_4:31466947-31466966 None:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG - chr8_4:31466984-31467003 Msa1323260:intron 25.0%
!! AGTATGGATGATCATTTTAA+TGG - chr8_4:31467110-31467129 Msa1323260:intron 25.0%
!!! GATGATCATTTTAATGGATA+TGG - chr8_4:31467116-31467135 Msa1323260:intron 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG - chr8_4:31467235-31467254 Msa1323260:intron 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG + chr8_4:31467350-31467369 None:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG - chr8_4:31467408-31467427 Msa1323260:intron 25.0%
! GACTTCAAAATGATATTAAC+AGG - chr8_4:31467578-31467597 Msa1323260:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG - chr8_4:31467584-31467603 Msa1323260:intron 25.0%
! TCAAAATCAGAACAAATCAA+TGG - chr8_4:31464159-31464178 Msa1323260:three_prime_UTR 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG + chr8_4:31464275-31464294 None:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG + chr8_4:31464277-31464296 None:intergenic 25.0%
!!! TTTTTTTTGGACCTAAATTG+TGG - chr8_4:31464524-31464543 Msa1323260:CDS 25.0%
! TAAAGCAAAAACCACAATTT+AGG + chr8_4:31464538-31464557 None:intergenic 25.0%
!! AAATTGTGGTTTTTGCTTTA+TGG - chr8_4:31464538-31464557 Msa1323260:CDS 25.0%
!!! TTTGAGGTTGATATATTAGT+TGG - chr8_4:31464634-31464653 Msa1323260:intron 25.0%
!!! AATAGGTTGATGTTAATATG+TGG - chr8_4:31465050-31465069 Msa1323260:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG - chr8_4:31465077-31465096 Msa1323260:CDS 25.0%
! GATTAGAGTTAATTCTTACA+GGG - chr8_4:31465078-31465097 Msa1323260:CDS 25.0%
!! ATTAATAACCAAAAGCACAA+AGG + chr8_4:31465166-31465185 None:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG - chr8_4:31465166-31465185 Msa1323260:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG + chr8_4:31465591-31465610 None:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG - chr8_4:31465914-31465933 Msa1323260:intron 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG + chr8_4:31466032-31466051 None:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG - chr8_4:31466031-31466050 Msa1323260:intron 25.0%
! ATATACAAATTAAGCACACA+GGG - chr8_4:31466032-31466051 Msa1323260:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG - chr8_4:31466070-31466089 Msa1323260:intron 25.0%
! AAATATAAGTATGCCAATAG+TGG - chr8_4:31466116-31466135 Msa1323260:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG + chr8_4:31466166-31466185 None:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG + chr8_4:31466947-31466966 None:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG - chr8_4:31466984-31467003 Msa1323260:intron 25.0%
!! AGTATGGATGATCATTTTAA+TGG - chr8_4:31467110-31467129 Msa1323260:intron 25.0%
!!! GATGATCATTTTAATGGATA+TGG - chr8_4:31467116-31467135 Msa1323260:intron 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG - chr8_4:31467235-31467254 Msa1323260:intron 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG + chr8_4:31467350-31467369 None:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG - chr8_4:31467408-31467427 Msa1323260:intron 25.0%
! GACTTCAAAATGATATTAAC+AGG - chr8_4:31467578-31467597 Msa1323260:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG - chr8_4:31467584-31467603 Msa1323260:intron 25.0%
ACCTTCAAATCTTCATTCAT+CGG - chr8_4:31464286-31464305 Msa1323260:CDS 30.0%
!! AGAAAGAACTCGTTTGTTTT+GGG + chr8_4:31464314-31464333 None:intergenic 30.0%
TGTCATGTTCAAAGATCTTT+GGG - chr8_4:31464417-31464436 Msa1323260:intron 30.0%
TCAACACAACATTAACAAAC+AGG + chr8_4:31464585-31464604 None:intergenic 30.0%
! TTTGAAGTTGTATCAGATCA+AGG - chr8_4:31464787-31464806 Msa1323260:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG - chr8_4:31464925-31464944 Msa1323260:intron 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG + chr8_4:31464975-31464994 None:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG + chr8_4:31464976-31464995 None:intergenic 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG - chr8_4:31465167-31465186 Msa1323260:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG - chr8_4:31465260-31465279 Msa1323260:intron 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG - chr8_4:31465448-31465467 Msa1323260:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG - chr8_4:31465449-31465468 Msa1323260:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG - chr8_4:31465476-31465495 Msa1323260:intron 30.0%
GAAATCCATTTCAATGACTT+TGG - chr8_4:31466069-31466088 Msa1323260:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG + chr8_4:31466077-31466096 None:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG - chr8_4:31466323-31466342 Msa1323260:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG - chr8_4:31466369-31466388 Msa1323260:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG + chr8_4:31466824-31466843 None:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG + chr8_4:31467278-31467297 None:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG + chr8_4:31467394-31467413 None:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG + chr8_4:31467475-31467494 None:intergenic 30.0%
ATATTTACCAGCATGCAAAA+TGG + chr8_4:31467551-31467570 None:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG - chr8_4:31467617-31467636 Msa1323260:intron 30.0%
ACATCAAAAACATCGTCTAA+GGG + chr8_4:31467873-31467892 None:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG + chr8_4:31467874-31467893 None:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG - chr8_4:31467933-31467952 Msa1323260:CDS 30.0%
TGTAATATGCTGTGGATATA+TGG - chr8_4:31468020-31468039 Msa1323260:five_prime_UTR 30.0%
ACCTTCAAATCTTCATTCAT+CGG - chr8_4:31464286-31464305 Msa1323260:CDS 30.0%
!! AGAAAGAACTCGTTTGTTTT+GGG + chr8_4:31464314-31464333 None:intergenic 30.0%
TGTCATGTTCAAAGATCTTT+GGG - chr8_4:31464417-31464436 Msa1323260:intron 30.0%
TCAACACAACATTAACAAAC+AGG + chr8_4:31464585-31464604 None:intergenic 30.0%
! TTTGAAGTTGTATCAGATCA+AGG - chr8_4:31464787-31464806 Msa1323260:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG - chr8_4:31464925-31464944 Msa1323260:intron 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG + chr8_4:31464975-31464994 None:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG + chr8_4:31464976-31464995 None:intergenic 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG - chr8_4:31465167-31465186 Msa1323260:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG - chr8_4:31465260-31465279 Msa1323260:intron 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG - chr8_4:31465448-31465467 Msa1323260:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG - chr8_4:31465449-31465468 Msa1323260:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG - chr8_4:31465476-31465495 Msa1323260:intron 30.0%
GAAATCCATTTCAATGACTT+TGG - chr8_4:31466069-31466088 Msa1323260:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG + chr8_4:31466077-31466096 None:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG - chr8_4:31466323-31466342 Msa1323260:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG - chr8_4:31466369-31466388 Msa1323260:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG + chr8_4:31466824-31466843 None:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG + chr8_4:31467278-31467297 None:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG + chr8_4:31467394-31467413 None:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG + chr8_4:31467475-31467494 None:intergenic 30.0%
ATATTTACCAGCATGCAAAA+TGG + chr8_4:31467551-31467570 None:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG - chr8_4:31467617-31467636 Msa1323260:intron 30.0%
ACATCAAAAACATCGTCTAA+GGG + chr8_4:31467873-31467892 None:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG + chr8_4:31467874-31467893 None:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG - chr8_4:31467933-31467952 Msa1323260:CDS 30.0%
TGTAATATGCTGTGGATATA+TGG - chr8_4:31468020-31468039 Msa1323260:five_prime_UTR 30.0%
! TAGATGAGAGTGTGAATTGA+AGG + chr8_4:31464119-31464138 None:intergenic 35.0%
TTCACACTCTCATCTATTCT+AGG - chr8_4:31464123-31464142 Msa1323260:three_prime_UTR 35.0%
TCACACTCTCATCTATTCTA+GGG - chr8_4:31464124-31464143 Msa1323260:three_prime_UTR 35.0%
! CAGAAAGAACTCGTTTGTTT+TGG + chr8_4:31464315-31464334 None:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG - chr8_4:31464389-31464408 Msa1323260:intron 35.0%
CTGTCATGTTCAAAGATCTT+TGG - chr8_4:31464416-31464435 Msa1323260:intron 35.0%
ACAACATTAACAAACAGGAG+GGG + chr8_4:31464580-31464599 None:intergenic 35.0%
CACAACATTAACAAACAGGA+GGG + chr8_4:31464581-31464600 None:intergenic 35.0%
ACACAACATTAACAAACAGG+AGG + chr8_4:31464582-31464601 None:intergenic 35.0%
GTCATACTTTACTTACCTAC+AGG + chr8_4:31464747-31464766 None:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG + chr8_4:31464984-31465003 None:intergenic 35.0%
! GGTTGATGTTAATATGTGGT+TGG - chr8_4:31465054-31465073 Msa1323260:intron 35.0%
AGATCATTAGTTACCAGCAT+GGG + chr8_4:31465140-31465159 None:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG + chr8_4:31465141-31465160 None:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG - chr8_4:31465199-31465218 Msa1323260:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG - chr8_4:31465224-31465243 Msa1323260:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG - chr8_4:31465225-31465244 Msa1323260:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG + chr8_4:31465329-31465348 None:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG + chr8_4:31465330-31465349 None:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG + chr8_4:31465331-31465350 None:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG + chr8_4:31465332-31465351 None:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG + chr8_4:31465376-31465395 None:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG + chr8_4:31465379-31465398 None:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG + chr8_4:31465407-31465426 None:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG + chr8_4:31465408-31465427 None:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG - chr8_4:31465727-31465746 Msa1323260:CDS 35.0%
! GAAGAGCCTTTTAACAACTT+TGG + chr8_4:31465736-31465755 None:intergenic 35.0%
GTTATGATTACACAAGTGTC+TGG + chr8_4:31465850-31465869 None:intergenic 35.0%
CTTATCCTTTGAACCACTAT+TGG + chr8_4:31466132-31466151 None:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG + chr8_4:31466162-31466181 None:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG - chr8_4:31466193-31466212 Msa1323260:intron 35.0%
AATTGTATTCACAAGACTGC+TGG - chr8_4:31466472-31466491 Msa1323260:intron 35.0%
AAATGACAGATCCATATGGT+GGG - chr8_4:31466682-31466701 Msa1323260:intron 35.0%
! AACTCACAGAAACTTCCTTT+TGG + chr8_4:31466750-31466769 None:intergenic 35.0%
! TACCAATTTGGAACAATCAG+TGG - chr8_4:31466791-31466810 Msa1323260:CDS 35.0%
AAAAAGAGGTAAGTCGTACA+TGG + chr8_4:31466909-31466928 None:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG - chr8_4:31466908-31466927 Msa1323260:CDS 35.0%
TCAAGTTATCTTGGGTTACT+AGG - chr8_4:31466993-31467012 Msa1323260:intron 35.0%
TCAAGTATATTCTGCCTCAA+CGG - chr8_4:31467017-31467036 Msa1323260:intron 35.0%
AATTAAACCACAAACCGTTG+AGG + chr8_4:31467034-31467053 None:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG - chr8_4:31467265-31467284 Msa1323260:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG + chr8_4:31467284-31467303 None:intergenic 35.0%
TTTGACCTCTACTATGGATT+TGG - chr8_4:31467414-31467433 Msa1323260:intron 35.0%
! ACAATTTCCATTTTGCATGC+TGG - chr8_4:31467541-31467560 Msa1323260:intron 35.0%
TTTGCATGCTGGTAAATATG+TGG - chr8_4:31467552-31467571 Msa1323260:intron 35.0%
AAAACACCACTTCTATCATC+TGG + chr8_4:31467669-31467688 None:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG - chr8_4:31467692-31467711 Msa1323260:intron 35.0%
GGTTTGATACATTAATCTGG+TGG - chr8_4:31467695-31467714 Msa1323260:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG - chr8_4:31467780-31467799 Msa1323260:CDS 35.0%
! TCTTTACATTTTGTCAGGGA+GGG - chr8_4:31467781-31467800 Msa1323260:CDS 35.0%
GGAAAGAGCTATTATATGCA+AGG - chr8_4:31467820-31467839 Msa1323260:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG - chr8_4:31467831-31467850 Msa1323260:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG + chr8_4:31467871-31467890 None:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG + chr8_4:31467872-31467891 None:intergenic 35.0%
ATACAGTACAGTTAAGCAAC+AGG + chr8_4:31467909-31467928 None:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG + chr8_4:31467992-31468011 None:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG - chr8_4:31468012-31468031 Msa1323260:exon 35.0%
! TAGATGAGAGTGTGAATTGA+AGG + chr8_4:31464119-31464138 None:intergenic 35.0%
TTCACACTCTCATCTATTCT+AGG - chr8_4:31464123-31464142 Msa1323260:three_prime_UTR 35.0%
TCACACTCTCATCTATTCTA+GGG - chr8_4:31464124-31464143 Msa1323260:three_prime_UTR 35.0%
! CAGAAAGAACTCGTTTGTTT+TGG + chr8_4:31464315-31464334 None:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG - chr8_4:31464389-31464408 Msa1323260:intron 35.0%
CTGTCATGTTCAAAGATCTT+TGG - chr8_4:31464416-31464435 Msa1323260:intron 35.0%
ACAACATTAACAAACAGGAG+GGG + chr8_4:31464580-31464599 None:intergenic 35.0%
CACAACATTAACAAACAGGA+GGG + chr8_4:31464581-31464600 None:intergenic 35.0%
ACACAACATTAACAAACAGG+AGG + chr8_4:31464582-31464601 None:intergenic 35.0%
GTCATACTTTACTTACCTAC+AGG + chr8_4:31464747-31464766 None:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG + chr8_4:31464984-31465003 None:intergenic 35.0%
! GGTTGATGTTAATATGTGGT+TGG - chr8_4:31465054-31465073 Msa1323260:intron 35.0%
AGATCATTAGTTACCAGCAT+GGG + chr8_4:31465140-31465159 None:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG + chr8_4:31465141-31465160 None:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG - chr8_4:31465199-31465218 Msa1323260:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG - chr8_4:31465224-31465243 Msa1323260:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG - chr8_4:31465225-31465244 Msa1323260:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG + chr8_4:31465329-31465348 None:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG + chr8_4:31465330-31465349 None:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG + chr8_4:31465331-31465350 None:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG + chr8_4:31465332-31465351 None:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG + chr8_4:31465376-31465395 None:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG + chr8_4:31465379-31465398 None:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG + chr8_4:31465407-31465426 None:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG + chr8_4:31465408-31465427 None:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG - chr8_4:31465727-31465746 Msa1323260:CDS 35.0%
! GAAGAGCCTTTTAACAACTT+TGG + chr8_4:31465736-31465755 None:intergenic 35.0%
GTTATGATTACACAAGTGTC+TGG + chr8_4:31465850-31465869 None:intergenic 35.0%
CTTATCCTTTGAACCACTAT+TGG + chr8_4:31466132-31466151 None:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG + chr8_4:31466162-31466181 None:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG - chr8_4:31466193-31466212 Msa1323260:intron 35.0%
AATTGTATTCACAAGACTGC+TGG - chr8_4:31466472-31466491 Msa1323260:intron 35.0%
AAATGACAGATCCATATGGT+GGG - chr8_4:31466682-31466701 Msa1323260:intron 35.0%
! AACTCACAGAAACTTCCTTT+TGG + chr8_4:31466750-31466769 None:intergenic 35.0%
! TACCAATTTGGAACAATCAG+TGG - chr8_4:31466791-31466810 Msa1323260:CDS 35.0%
AAAAAGAGGTAAGTCGTACA+TGG + chr8_4:31466909-31466928 None:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG - chr8_4:31466908-31466927 Msa1323260:CDS 35.0%
TCAAGTTATCTTGGGTTACT+AGG - chr8_4:31466993-31467012 Msa1323260:intron 35.0%
TCAAGTATATTCTGCCTCAA+CGG - chr8_4:31467017-31467036 Msa1323260:intron 35.0%
AATTAAACCACAAACCGTTG+AGG + chr8_4:31467034-31467053 None:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG - chr8_4:31467265-31467284 Msa1323260:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG + chr8_4:31467284-31467303 None:intergenic 35.0%
TTTGACCTCTACTATGGATT+TGG - chr8_4:31467414-31467433 Msa1323260:intron 35.0%
! ACAATTTCCATTTTGCATGC+TGG - chr8_4:31467541-31467560 Msa1323260:intron 35.0%
TTTGCATGCTGGTAAATATG+TGG - chr8_4:31467552-31467571 Msa1323260:intron 35.0%
AAAACACCACTTCTATCATC+TGG + chr8_4:31467669-31467688 None:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG - chr8_4:31467692-31467711 Msa1323260:intron 35.0%
GGTTTGATACATTAATCTGG+TGG - chr8_4:31467695-31467714 Msa1323260:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG - chr8_4:31467780-31467799 Msa1323260:CDS 35.0%
! TCTTTACATTTTGTCAGGGA+GGG - chr8_4:31467781-31467800 Msa1323260:CDS 35.0%
GGAAAGAGCTATTATATGCA+AGG - chr8_4:31467820-31467839 Msa1323260:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG - chr8_4:31467831-31467850 Msa1323260:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG + chr8_4:31467871-31467890 None:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG + chr8_4:31467872-31467891 None:intergenic 35.0%
ATACAGTACAGTTAAGCAAC+AGG + chr8_4:31467909-31467928 None:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG + chr8_4:31467992-31468011 None:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG - chr8_4:31468012-31468031 Msa1323260:exon 35.0%
GGTGTGATAGATGGATGAAA+AGG + chr8_4:31464211-31464230 None:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+GGG + chr8_4:31464263-31464282 None:intergenic 40.0%
!!! TAGATTTTGGGGTGTAGTGA+AGG + chr8_4:31464264-31464283 None:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG + chr8_4:31464290-31464309 None:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG + chr8_4:31464364-31464383 None:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG - chr8_4:31464388-31464407 Msa1323260:intron 40.0%
! TAGTATTTTCACTGCTGCTG+GGG - chr8_4:31464390-31464409 Msa1323260:intron 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG - chr8_4:31464423-31464442 Msa1323260:intron 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG - chr8_4:31464721-31464740 Msa1323260:intron 40.0%
TATCAGATCAAGGCCTTACT+TGG - chr8_4:31464797-31464816 Msa1323260:intron 40.0%
AACAGACATTGTCCATAAGC+TGG + chr8_4:31464940-31464959 None:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG - chr8_4:31465089-31465108 Msa1323260:CDS 40.0%
!!! GTGGCACTTTTAAGGCATTT+TGG - chr8_4:31465111-31465130 Msa1323260:intron 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG - chr8_4:31465155-31465174 Msa1323260:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG - chr8_4:31465231-31465250 Msa1323260:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG + chr8_4:31465275-31465294 None:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG - chr8_4:31465274-31465293 Msa1323260:intron 40.0%
TGAAATGACAAAGGAGGACA+AGG + chr8_4:31465370-31465389 None:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG - chr8_4:31465389-31465408 Msa1323260:intron 40.0%
TGTTTCCCTAGGGAATTATG+AGG - chr8_4:31465399-31465418 Msa1323260:intron 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG - chr8_4:31465480-31465499 Msa1323260:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG - chr8_4:31466036-31466055 Msa1323260:intron 40.0%
GTATGCCAATAGTGGTTCAA+AGG - chr8_4:31466124-31466143 Msa1323260:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG + chr8_4:31466248-31466267 None:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG + chr8_4:31466543-31466562 None:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG - chr8_4:31466545-31466564 Msa1323260:intron 40.0%
CAAAGAAAGAAGAATGTGGC+TGG - chr8_4:31466549-31466568 Msa1323260:intron 40.0%
GCACAAATGACAGATCCATA+TGG - chr8_4:31466678-31466697 Msa1323260:intron 40.0%
CAAATGACAGATCCATATGG+TGG - chr8_4:31466681-31466700 Msa1323260:intron 40.0%
! CAGGGTAGGTTTTACCAATT+TGG - chr8_4:31466779-31466798 Msa1323260:CDS 40.0%
! AGCCACTGATTGTTCCAAAT+TGG + chr8_4:31466796-31466815 None:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG - chr8_4:31466914-31466933 Msa1323260:CDS 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG - chr8_4:31466918-31466937 Msa1323260:CDS 40.0%
TTCCTACCTTCACCAAAAAG+AGG + chr8_4:31466923-31466942 None:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG - chr8_4:31467082-31467101 Msa1323260:intron 40.0%
ATTTGCCAAGGATAGCAGTA+TGG - chr8_4:31467094-31467113 Msa1323260:intron 40.0%
ATCATCCATACTGCTATCCT+TGG + chr8_4:31467102-31467121 None:intergenic 40.0%
GATATCCGTGCATTACCTTA+CGG + chr8_4:31467313-31467332 None:intergenic 40.0%
AACCAATTTCGCCTTCTTTC+AGG - chr8_4:31467380-31467399 Msa1323260:intron 40.0%
GAGGGATGTTTGTGTTTAGA+GGG - chr8_4:31467799-31467818 Msa1323260:CDS 40.0%
GGTGTGATAGATGGATGAAA+AGG + chr8_4:31464211-31464230 None:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+GGG + chr8_4:31464263-31464282 None:intergenic 40.0%
!!! TAGATTTTGGGGTGTAGTGA+AGG + chr8_4:31464264-31464283 None:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG + chr8_4:31464290-31464309 None:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG + chr8_4:31464364-31464383 None:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG - chr8_4:31464388-31464407 Msa1323260:intron 40.0%
! TAGTATTTTCACTGCTGCTG+GGG - chr8_4:31464390-31464409 Msa1323260:intron 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG - chr8_4:31464423-31464442 Msa1323260:intron 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG - chr8_4:31464721-31464740 Msa1323260:intron 40.0%
TATCAGATCAAGGCCTTACT+TGG - chr8_4:31464797-31464816 Msa1323260:intron 40.0%
AACAGACATTGTCCATAAGC+TGG + chr8_4:31464940-31464959 None:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG - chr8_4:31465089-31465108 Msa1323260:CDS 40.0%
!!! GTGGCACTTTTAAGGCATTT+TGG - chr8_4:31465111-31465130 Msa1323260:intron 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG - chr8_4:31465155-31465174 Msa1323260:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG - chr8_4:31465231-31465250 Msa1323260:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG + chr8_4:31465275-31465294 None:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG - chr8_4:31465274-31465293 Msa1323260:intron 40.0%
TGAAATGACAAAGGAGGACA+AGG + chr8_4:31465370-31465389 None:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG - chr8_4:31465389-31465408 Msa1323260:intron 40.0%
TGTTTCCCTAGGGAATTATG+AGG - chr8_4:31465399-31465418 Msa1323260:intron 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG - chr8_4:31465480-31465499 Msa1323260:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG - chr8_4:31466036-31466055 Msa1323260:intron 40.0%
GTATGCCAATAGTGGTTCAA+AGG - chr8_4:31466124-31466143 Msa1323260:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG + chr8_4:31466248-31466267 None:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG + chr8_4:31466543-31466562 None:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG - chr8_4:31466545-31466564 Msa1323260:intron 40.0%
CAAAGAAAGAAGAATGTGGC+TGG - chr8_4:31466549-31466568 Msa1323260:intron 40.0%
GCACAAATGACAGATCCATA+TGG - chr8_4:31466678-31466697 Msa1323260:intron 40.0%
CAAATGACAGATCCATATGG+TGG - chr8_4:31466681-31466700 Msa1323260:intron 40.0%
! CAGGGTAGGTTTTACCAATT+TGG - chr8_4:31466779-31466798 Msa1323260:CDS 40.0%
! AGCCACTGATTGTTCCAAAT+TGG + chr8_4:31466796-31466815 None:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG - chr8_4:31466914-31466933 Msa1323260:CDS 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG - chr8_4:31466918-31466937 Msa1323260:CDS 40.0%
TTCCTACCTTCACCAAAAAG+AGG + chr8_4:31466923-31466942 None:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG - chr8_4:31467082-31467101 Msa1323260:intron 40.0%
ATTTGCCAAGGATAGCAGTA+TGG - chr8_4:31467094-31467113 Msa1323260:intron 40.0%
ATCATCCATACTGCTATCCT+TGG + chr8_4:31467102-31467121 None:intergenic 40.0%
GATATCCGTGCATTACCTTA+CGG + chr8_4:31467313-31467332 None:intergenic 40.0%
AACCAATTTCGCCTTCTTTC+AGG - chr8_4:31467380-31467399 Msa1323260:intron 40.0%
GAGGGATGTTTGTGTTTAGA+GGG - chr8_4:31467799-31467818 Msa1323260:CDS 40.0%
! AGAGCCACGGATATTTTCAG+TGG + chr8_4:31464083-31464102 None:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG + chr8_4:31464234-31464253 None:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG + chr8_4:31464235-31464254 None:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG - chr8_4:31464361-31464380 Msa1323260:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG + chr8_4:31464365-31464384 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG - chr8_4:31464429-31464448 Msa1323260:intron 45.0%
TAACCTAGTGTTTGGCCTGT+AGG - chr8_4:31464729-31464748 Msa1323260:intron 45.0%
TTACCTACAGGCCAAACACT+AGG + chr8_4:31464735-31464754 None:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG - chr8_4:31465103-31465122 Msa1323260:intron 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG - chr8_4:31465294-31465313 Msa1323260:intron 45.0%
GGTGTCAAGCTAATTGCAGT+GGG - chr8_4:31465295-31465314 Msa1323260:intron 45.0%
CAGTGTTTGACTGTTTCCCT+AGG - chr8_4:31465388-31465407 Msa1323260:intron 45.0%
! CGTCCGAAACTACTCTAAAG+AGG + chr8_4:31465482-31465501 None:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG + chr8_4:31465585-31465604 None:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG - chr8_4:31465676-31465695 Msa1323260:CDS 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG + chr8_4:31465696-31465715 None:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG - chr8_4:31466044-31466063 Msa1323260:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG + chr8_4:31466241-31466260 None:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG - chr8_4:31466396-31466415 Msa1323260:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG - chr8_4:31466404-31466423 Msa1323260:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG - chr8_4:31466405-31466424 Msa1323260:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG - chr8_4:31466476-31466495 Msa1323260:intron 45.0%
ACTGCTGGAAGGATTCATTG+CGG - chr8_4:31466487-31466506 Msa1323260:intron 45.0%
AGTGAGGATCTGTTCATCGA+TGG + chr8_4:31466527-31466546 None:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG - chr8_4:31466526-31466545 Msa1323260:intron 45.0%
ATCAGCAAGGGAGATGACAT+GGG - chr8_4:31466599-31466618 Msa1323260:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG - chr8_4:31466760-31466779 Msa1323260:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG - chr8_4:31466761-31466780 Msa1323260:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG - chr8_4:31466927-31466946 Msa1323260:CDS 45.0%
TATTCTGCCTCAACGGTTTG+TGG - chr8_4:31467024-31467043 Msa1323260:intron 45.0%
TGCCTGAAAGAAGGCGAAAT+TGG + chr8_4:31467385-31467404 None:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG + chr8_4:31467422-31467441 None:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG + chr8_4:31467440-31467459 None:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG + chr8_4:31467445-31467464 None:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG + chr8_4:31467455-31467474 None:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG + chr8_4:31467456-31467475 None:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG + chr8_4:31467460-31467479 None:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG + chr8_4:31467664-31467683 None:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG - chr8_4:31467674-31467693 Msa1323260:intron 45.0%
GGAGGGATGTTTGTGTTTAG+AGG - chr8_4:31467798-31467817 Msa1323260:CDS 45.0%
! AGAGCCACGGATATTTTCAG+TGG + chr8_4:31464083-31464102 None:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG + chr8_4:31464234-31464253 None:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG + chr8_4:31464235-31464254 None:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG - chr8_4:31464361-31464380 Msa1323260:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG + chr8_4:31464365-31464384 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG - chr8_4:31464429-31464448 Msa1323260:intron 45.0%
TAACCTAGTGTTTGGCCTGT+AGG - chr8_4:31464729-31464748 Msa1323260:intron 45.0%
TTACCTACAGGCCAAACACT+AGG + chr8_4:31464735-31464754 None:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG - chr8_4:31465103-31465122 Msa1323260:intron 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG - chr8_4:31465294-31465313 Msa1323260:intron 45.0%
GGTGTCAAGCTAATTGCAGT+GGG - chr8_4:31465295-31465314 Msa1323260:intron 45.0%
CAGTGTTTGACTGTTTCCCT+AGG - chr8_4:31465388-31465407 Msa1323260:intron 45.0%
! CGTCCGAAACTACTCTAAAG+AGG + chr8_4:31465482-31465501 None:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG + chr8_4:31465585-31465604 None:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG - chr8_4:31465676-31465695 Msa1323260:CDS 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG + chr8_4:31465696-31465715 None:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG - chr8_4:31466044-31466063 Msa1323260:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG + chr8_4:31466241-31466260 None:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG - chr8_4:31466396-31466415 Msa1323260:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG - chr8_4:31466404-31466423 Msa1323260:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG - chr8_4:31466405-31466424 Msa1323260:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG - chr8_4:31466476-31466495 Msa1323260:intron 45.0%
ACTGCTGGAAGGATTCATTG+CGG - chr8_4:31466487-31466506 Msa1323260:intron 45.0%
AGTGAGGATCTGTTCATCGA+TGG + chr8_4:31466527-31466546 None:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG - chr8_4:31466526-31466545 Msa1323260:intron 45.0%
ATCAGCAAGGGAGATGACAT+GGG - chr8_4:31466599-31466618 Msa1323260:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG - chr8_4:31466760-31466779 Msa1323260:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG - chr8_4:31466761-31466780 Msa1323260:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG - chr8_4:31466927-31466946 Msa1323260:CDS 45.0%
TATTCTGCCTCAACGGTTTG+TGG - chr8_4:31467024-31467043 Msa1323260:intron 45.0%
TGCCTGAAAGAAGGCGAAAT+TGG + chr8_4:31467385-31467404 None:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG + chr8_4:31467422-31467441 None:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG + chr8_4:31467440-31467459 None:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG + chr8_4:31467445-31467464 None:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG + chr8_4:31467455-31467474 None:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG + chr8_4:31467456-31467475 None:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG + chr8_4:31467460-31467479 None:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG + chr8_4:31467664-31467683 None:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG - chr8_4:31467674-31467693 Msa1323260:intron 45.0%
GGAGGGATGTTTGTGTTTAG+AGG - chr8_4:31467798-31467817 Msa1323260:CDS 45.0%
!! GATATTTTCAGTGGCGGGAG+AGG + chr8_4:31464074-31464093 None:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG + chr8_4:31464079-31464098 None:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG + chr8_4:31464080-31464099 None:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG + chr8_4:31464096-31464115 None:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG + chr8_4:31464220-31464239 None:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG + chr8_4:31464232-31464251 None:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG + chr8_4:31464233-31464252 None:intergenic 50.0%
TGTAGTGAAGGGTAGAGGAG+GGG + chr8_4:31464252-31464271 None:intergenic 50.0%
GTGTAGTGAAGGGTAGAGGA+GGG + chr8_4:31464253-31464272 None:intergenic 50.0%
GGATCAGGAACAGGTCAGAA+TGG - chr8_4:31464438-31464457 Msa1323260:intron 50.0%
CTTACAGGGAATAGCTGTGG+TGG - chr8_4:31465092-31465111 Msa1323260:CDS 50.0%
AAGCTAATTGCAGTGGGCGT+TGG - chr8_4:31465301-31465320 Msa1323260:intron 50.0%
! CAACTTTGGCTCATCAGCTG+TGG + chr8_4:31465722-31465741 None:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG - chr8_4:31466233-31466252 Msa1323260:intron 50.0%
TGAACCCACGATACCTCACT+TGG + chr8_4:31466412-31466431 None:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG - chr8_4:31466411-31466430 Msa1323260:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG - chr8_4:31466418-31466437 Msa1323260:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG - chr8_4:31466419-31466438 Msa1323260:intron 50.0%
CTGCTGGAAGGATTCATTGC+GGG - chr8_4:31466488-31466507 Msa1323260:intron 50.0%
AGCGTGATCCTCATCAGCAA+GGG - chr8_4:31466587-31466606 Msa1323260:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG + chr8_4:31466598-31466617 None:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG - chr8_4:31466598-31466617 Msa1323260:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG - chr8_4:31466685-31466704 Msa1323260:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG - chr8_4:31466717-31466736 Msa1323260:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG - chr8_4:31466718-31466737 Msa1323260:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG - chr8_4:31466765-31466784 Msa1323260:CDS 50.0%
TTATGCAGACCCTGACCGTA+AGG - chr8_4:31467295-31467314 Msa1323260:intron 50.0%
CGTGCATTACCTTACGGTCA+GGG + chr8_4:31467307-31467326 None:intergenic 50.0%
CCTGACCGTAAGGTAATGCA+CGG - chr8_4:31467305-31467324 Msa1323260:intron 50.0%
GCCACTCCAGATGATAGAAG+TGG - chr8_4:31467660-31467679 Msa1323260:intron 50.0%
!! GATATTTTCAGTGGCGGGAG+AGG + chr8_4:31464074-31464093 None:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG + chr8_4:31464079-31464098 None:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG + chr8_4:31464080-31464099 None:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG + chr8_4:31464096-31464115 None:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG + chr8_4:31464220-31464239 None:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG + chr8_4:31464232-31464251 None:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG + chr8_4:31464233-31464252 None:intergenic 50.0%
TGTAGTGAAGGGTAGAGGAG+GGG + chr8_4:31464252-31464271 None:intergenic 50.0%
GTGTAGTGAAGGGTAGAGGA+GGG + chr8_4:31464253-31464272 None:intergenic 50.0%
GGATCAGGAACAGGTCAGAA+TGG - chr8_4:31464438-31464457 Msa1323260:intron 50.0%
CTTACAGGGAATAGCTGTGG+TGG - chr8_4:31465092-31465111 Msa1323260:CDS 50.0%
AAGCTAATTGCAGTGGGCGT+TGG - chr8_4:31465301-31465320 Msa1323260:intron 50.0%
! CAACTTTGGCTCATCAGCTG+TGG + chr8_4:31465722-31465741 None:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG - chr8_4:31466233-31466252 Msa1323260:intron 50.0%
TGAACCCACGATACCTCACT+TGG + chr8_4:31466412-31466431 None:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG - chr8_4:31466411-31466430 Msa1323260:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG - chr8_4:31466418-31466437 Msa1323260:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG - chr8_4:31466419-31466438 Msa1323260:intron 50.0%
CTGCTGGAAGGATTCATTGC+GGG - chr8_4:31466488-31466507 Msa1323260:intron 50.0%
AGCGTGATCCTCATCAGCAA+GGG - chr8_4:31466587-31466606 Msa1323260:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG + chr8_4:31466598-31466617 None:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG - chr8_4:31466598-31466617 Msa1323260:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG - chr8_4:31466685-31466704 Msa1323260:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG - chr8_4:31466717-31466736 Msa1323260:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG - chr8_4:31466718-31466737 Msa1323260:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG - chr8_4:31466765-31466784 Msa1323260:CDS 50.0%
TTATGCAGACCCTGACCGTA+AGG - chr8_4:31467295-31467314 Msa1323260:intron 50.0%
CGTGCATTACCTTACGGTCA+GGG + chr8_4:31467307-31467326 None:intergenic 50.0%
CCTGACCGTAAGGTAATGCA+CGG - chr8_4:31467305-31467324 Msa1323260:intron 50.0%
GCCACTCCAGATGATAGAAG+TGG - chr8_4:31467660-31467679 Msa1323260:intron 50.0%
CCCGCCACTGAAAATATCCG+TGG - chr8_4:31464076-31464095 Msa1323260:three_prime_UTR 55.0%
GGTGTAGTGAAGGGTAGAGG+AGG + chr8_4:31464254-31464273 None:intergenic 55.0%
TGGGGTGTAGTGAAGGGTAG+AGG + chr8_4:31464257-31464276 None:intergenic 55.0%
! GGCATTTTGGATGCCCATGC+TGG - chr8_4:31465124-31465143 Msa1323260:intron 55.0%
ACAGGCTGCTGAAGCTGACA+AGG + chr8_4:31466223-31466242 None:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG - chr8_4:31466417-31466436 Msa1323260:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG - chr8_4:31466426-31466445 Msa1323260:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG - chr8_4:31466430-31466449 Msa1323260:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG - chr8_4:31466435-31466454 Msa1323260:intron 55.0%
! GTGGGGATGTAGGTTGGACA+GGG - chr8_4:31466436-31466455 Msa1323260:intron 55.0%
GGTTGGACAGGGAAAGACTG+TGG - chr8_4:31466447-31466466 Msa1323260:intron 55.0%
CAGCGTGATCCTCATCAGCA+AGG - chr8_4:31466586-31466605 Msa1323260:intron 55.0%
GACACACTCCACCCACCATA+TGG + chr8_4:31466696-31466715 None:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG - chr8_4:31466721-31466740 Msa1323260:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG - chr8_4:31466724-31466743 Msa1323260:intron 55.0%
TTTGGCCACCTCCCTCACAA+AGG + chr8_4:31466732-31466751 None:intergenic 55.0%
TTGTGAGGGAGGTGGCCAAA+AGG - chr8_4:31466732-31466751 Msa1323260:intron 55.0%
CCGTGCATTACCTTACGGTC+AGG + chr8_4:31467308-31467327 None:intergenic 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG - chr8_4:31467837-31467856 Msa1323260:CDS 55.0%
CCCGCCACTGAAAATATCCG+TGG - chr8_4:31464076-31464095 Msa1323260:three_prime_UTR 55.0%
GGTGTAGTGAAGGGTAGAGG+AGG + chr8_4:31464254-31464273 None:intergenic 55.0%
TGGGGTGTAGTGAAGGGTAG+AGG + chr8_4:31464257-31464276 None:intergenic 55.0%
! GGCATTTTGGATGCCCATGC+TGG - chr8_4:31465124-31465143 Msa1323260:intron 55.0%
ACAGGCTGCTGAAGCTGACA+AGG + chr8_4:31466223-31466242 None:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG - chr8_4:31466417-31466436 Msa1323260:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG - chr8_4:31466426-31466445 Msa1323260:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG - chr8_4:31466430-31466449 Msa1323260:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG - chr8_4:31466435-31466454 Msa1323260:intron 55.0%
! GTGGGGATGTAGGTTGGACA+GGG - chr8_4:31466436-31466455 Msa1323260:intron 55.0%
GGTTGGACAGGGAAAGACTG+TGG - chr8_4:31466447-31466466 Msa1323260:intron 55.0%
CAGCGTGATCCTCATCAGCA+AGG - chr8_4:31466586-31466605 Msa1323260:intron 55.0%
GACACACTCCACCCACCATA+TGG + chr8_4:31466696-31466715 None:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG - chr8_4:31466721-31466740 Msa1323260:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG - chr8_4:31466724-31466743 Msa1323260:intron 55.0%
TTTGGCCACCTCCCTCACAA+AGG + chr8_4:31466732-31466751 None:intergenic 55.0%
TTGTGAGGGAGGTGGCCAAA+AGG - chr8_4:31466732-31466751 Msa1323260:intron 55.0%
CCGTGCATTACCTTACGGTC+AGG + chr8_4:31467308-31467327 None:intergenic 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG - chr8_4:31467837-31467856 Msa1323260:CDS 55.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG - chr8_4:31466697-31466716 Msa1323260:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG - chr8_4:31466701-31466720 Msa1323260:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG - chr8_4:31466702-31466721 Msa1323260:intron 60.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG - chr8_4:31466697-31466716 Msa1323260:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG - chr8_4:31466701-31466720 Msa1323260:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG - chr8_4:31466702-31466721 Msa1323260:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 31464043 31468151 31464043 ID=Msa1323260;Name=Msa1323260
chr8_4 mRNA 31464043 31468151 31464043 ID=Msa1323260-mRNA-1;Parent=Msa1323260;Name=Msa1323260-mRNA-1;_AED=0.28;_eAED=0.28;_QI=135|0.62|0.66|0.77|1|1|9|234|343
chr8_4 exon 31464043 31464396 31464043 ID=Msa1323260-mRNA-1:exon:10237;Parent=Msa1323260-mRNA-1
chr8_4 exon 31464499 31464594 31464499 ID=Msa1323260-mRNA-1:exon:10236;Parent=Msa1323260-mRNA-1
chr8_4 exon 31464733 31464792 31464733 ID=Msa1323260-mRNA-1:exon:10235;Parent=Msa1323260-mRNA-1
chr8_4 exon 31464878 31464922 31464878 ID=Msa1323260-mRNA-1:exon:10234;Parent=Msa1323260-mRNA-1
chr8_4 exon 31465057 31465120 31465057 ID=Msa1323260-mRNA-1:exon:10233;Parent=Msa1323260-mRNA-1
chr8_4 exon 31465624 31465761 31465624 ID=Msa1323260-mRNA-1:exon:10232;Parent=Msa1323260-mRNA-1
chr8_4 exon 31466763 31466951 31466763 ID=Msa1323260-mRNA-1:exon:10231;Parent=Msa1323260-mRNA-1
chr8_4 exon 31467049 31467095 31467049 ID=Msa1323260-mRNA-1:exon:10230;Parent=Msa1323260-mRNA-1
chr8_4 exon 31467744 31468151 31467744 ID=Msa1323260-mRNA-1:exon:10229;Parent=Msa1323260-mRNA-1
chr8_4 five_prime_UTR 31468017 31468151 31468017 ID=Msa1323260-mRNA-1:five_prime_utr;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31467744 31468016 31467744 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31467049 31467095 31467049 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31466763 31466951 31466763 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31465624 31465761 31465624 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31465057 31465120 31465057 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31464878 31464922 31464878 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31464733 31464792 31464733 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31464499 31464594 31464499 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 CDS 31464277 31464396 31464277 ID=Msa1323260-mRNA-1:cds;Parent=Msa1323260-mRNA-1
chr8_4 three_prime_UTR 31464043 31464276 31464043 ID=Msa1323260-mRNA-1:three_prime_utr;Parent=Msa1323260-mRNA-1
Gene Sequence

>Msa1323260

ATGGCAACAACTCTACAATCTCTTCGATTTCCTTTTCATCCATCTATCACACCCCCGAATTCACACACTTACCCCTCCTCTACCCTTCACTACACCCCAAAATCTAATACCTTCAAATCTTCATTCATCGGCACCCAAAACAAACGAGTTCTTTCTGCTAGAGCTTCGAGTTCACAGTATAGTCCCACTATTGCAGAGAATCTAGGCGATGTTAGTATTTTCACTGCTGCTGGGGAATCTGTCATGTTCAAAGATCTTTGGGATCAGGAACAGGGAATAGCTGTGGTGGCACTTTTAAGGCATTTTGGATGCCCATGCTGTTGGGAACTGGCTTCAACATTGAAAGAATCCAAATCAAGGTTTGATGCAGCTGGTGTCAAGCTAATTGCAGTGGGCGTTGGTGCCCCCAATAAAGCTCGTATTCTTGCTGAACGAGTAATGTTTCCTTGTCCTCCTTTGTCATTTCAGTGTTTGACTGTTTCCCTAGGGAATTATGAGGCTTTAAAAGAGAAGTGGGGATGTAGGTTGGACAGGGAAAGACTGTGGAAAATTGTATTCACAAGACTGCTGGAAGGATTCATTGCGGGTGAGATCAGTGTGCCATCGATGAACAGATCCTCACTGGCAAAGAAAGAAGAATGTGGCTGGGTCACTATCTGTGTTGCAAATTTGCCAAGGATAGCAGTATGGATGATCATTTTAATGGATATGTTACCATTTCCAATGGATTGTCTTTATGCAGACCCTGACCGTAAGGCATACAATTTTTTTGACCTCTACTATGGATTTGGCCGAACCTTTTTCAACCCAGCCAGTGCAAAGGTGTTATCGAGATTTGATGCTTTGCAAAAAGCGGTCAAGAACTATACAATAGAAGCCACTCCAGATGATAGAAGTGGTGTTTTGCAGCAGGGAGGGATGTTTGTGTTTAGAGGGAAAGAGCTATTATATGCAAGGAAAGACGAAGGCACAGGTGATCATGCCCCCTTAGACGATGTTTTTGATGTTTGCTGCAAAGTGCCTGTTGCTTAA

Protein sequence

>Msa1323260

MATTLQSLRFPFHPSITPPNSHTYPSSTLHYTPKSNTFKSSFIGTQNKRVLSARASSSQYSPTIAENLGDVSIFTAAGESVMFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKESKSRFDAAGVKLIAVGVGAPNKARILAERVMFPCPPLSFQCLTVSLGNYEALKEKWGCRLDRERLWKIVFTRLLEGFIAGEISVPSMNRSSLAKKEECGWVTICVANLPRIAVWMIILMDMLPFPMDCLYADPDRKAYNFFDLYYGFGRTFFNPASAKVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGTGDHAPLDDVFDVCCKVPVA*