Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235150 | XP_003626806.1 | 94.624 | 465 | 25 | 0 | 1 | 465 | 1 | 465 | 0.0 | 910 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235150 | sp|Q9M903|TGD4_ARATH | 35.425 | 494 | 273 | 13 | 1 | 464 | 1 | 478 | 5.47e-77 | 251 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235150 | G7LDE8 | 94.624 | 465 | 25 | 0 | 1 | 465 | 1 | 465 | 0.0 | 910 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0639370 | Msa1235150 | 0.845368 | 4.242007e-59 | -8.615850e-47 |
Msa0746600 | Msa1235150 | 0.802881 | 4.544449e-49 | -8.615850e-47 |
Msa0756470 | Msa1235150 | 0.828066 | 1.105033e-54 | -8.615850e-47 |
Msa0767520 | Msa1235150 | 0.854347 | 1.307303e-61 | -8.615850e-47 |
Msa0776480 | Msa1235150 | 0.801073 | 1.069591e-48 | -8.615850e-47 |
Msa0835520 | Msa1235150 | 0.803268 | 3.780566e-49 | -8.615850e-47 |
Msa0171780 | Msa1235150 | 0.800696 | 1.276819e-48 | -8.615850e-47 |
Msa0171930 | Msa1235150 | 0.800610 | 1.329223e-48 | -8.615850e-47 |
Msa1235150 | Msa1447300 | 0.808147 | 3.572481e-50 | -8.615850e-47 |
Msa1235150 | Msa1460440 | 0.818421 | 1.978017e-52 | -8.615850e-47 |
Msa0522660 | Msa1235150 | 0.802686 | 4.986059e-49 | -8.615850e-47 |
Msa0546840 | Msa1235150 | 0.808041 | 3.762397e-50 | -8.615850e-47 |
Msa0583170 | Msa1235150 | 0.893383 | 6.618144e-75 | -8.615850e-47 |
Msa0589150 | Msa1235150 | 0.812110 | 5.000239e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235150 | MtrunA17_Chr8g0336951 | 94.624 | 465 | 25 | 0 | 1 | 465 | 1 | 465 | 0.0 | 910 |
Msa1235150 | MtrunA17_Chr2g0297041 | 37.113 | 485 | 266 | 14 | 1 | 464 | 1 | 467 | 2.45e-80 | 256 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235150 | AT2G44640.1 | 52.954 | 474 | 191 | 8 | 1 | 465 | 1 | 451 | 5.11e-156 | 450 |
Msa1235150 | AT3G06960.1 | 35.425 | 494 | 273 | 13 | 1 | 464 | 1 | 478 | 5.56e-78 | 251 |
Msa1235150 | AT3G06960.2 | 38.158 | 304 | 176 | 6 | 1 | 294 | 1 | 302 | 1.13e-54 | 186 |
Find 131 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCCTGTGCTTCCTGGATT+TGG | 0.253326 | 8_2:-12922989 | Msa1235150:CDS |
CAGGTAGCTCCTGTGCTTCC+TGG | 0.270782 | 8_2:-12922995 | Msa1235150:CDS |
TTGCTTGGTATTCACCAAAA+AGG | 0.275530 | 8_2:-12921869 | Msa1235150:CDS |
CGAGTCTATATCAGTTGATT+TGG | 0.278646 | 8_2:-12924437 | Msa1235150:CDS |
CAGCCATTGATTCATCATTC+TGG | 0.279261 | 8_2:-12926965 | Msa1235150:CDS |
CAAAGAATCAATCGAAATTC+TGG | 0.282288 | 8_2:+12921986 | None:intergenic |
CCTTCAACATCTGTGTTGTT+TGG | 0.283212 | 8_2:-12924887 | Msa1235150:CDS |
GGAAGATTCACAAAGAAGTT+TGG | 0.289114 | 8_2:-12922855 | Msa1235150:CDS |
CTAGATATATCTTCAGCTTC+TGG | 0.292099 | 8_2:-12922807 | Msa1235150:CDS |
GAAGATTCACAAAGAAGTTT+GGG | 0.296464 | 8_2:-12922854 | Msa1235150:CDS |
GTACCTCATGCAGCAGTATC+TGG | 0.307606 | 8_2:-12924190 | Msa1235150:CDS |
GACTCCACATCGCTAGCTTT+AGG | 0.309022 | 8_2:+12921903 | None:intergenic |
ATCTGTGTTGTTTGGTTTAG+AGG | 0.310418 | 8_2:-12924879 | Msa1235150:CDS |
TCCACATTACCACGGACTTA+TGG | 0.315616 | 8_2:-12924212 | Msa1235150:CDS |
ACTCCACATCGCTAGCTTTA+GGG | 0.317436 | 8_2:+12921904 | None:intergenic |
GGCATCCCTTGTGGCTCGTC+GGG | 0.317553 | 8_2:-12924416 | Msa1235150:CDS |
GCAGCAGTATCTGGAATTAT+TGG | 0.335779 | 8_2:-12924181 | Msa1235150:intron |
TTTCTTCTCTTTGACACAGC+TGG | 0.345108 | 8_2:+12922933 | None:intergenic |
AAAGGAACCATACTCCTTCT+TGG | 0.350882 | 8_2:+12926773 | None:intergenic |
TTGACCACAAAGGAAGATAC+TGG | 0.352098 | 8_2:-12924468 | Msa1235150:CDS |
CGGGGATTGCGATACCGCTT+TGG | 0.356101 | 8_2:-12924397 | Msa1235150:CDS |
ATTGAAAATTTAATTGCAAC+AGG | 0.372612 | 8_2:-12921575 | Msa1235150:three_prime_UTR |
CGGGAAGAACCTTATTGATT+CGG | 0.383096 | 8_2:-12922964 | Msa1235150:CDS |
TATAGGTGGCTTGCAGCAAC+TGG | 0.383507 | 8_2:-12925061 | Msa1235150:intron |
GATCCTCTCCCGAATCAATA+AGG | 0.384097 | 8_2:+12922955 | None:intergenic |
GGGGATTGCGATACCGCTTT+GGG | 0.386728 | 8_2:-12924396 | Msa1235150:CDS |
GGTTGGGCCAAGTTTGTTCC+TGG | 0.387086 | 8_2:-12926909 | Msa1235150:CDS |
TAACTTAATCTTTCAACAAC+AGG | 0.387771 | 8_2:-12922706 | Msa1235150:intron |
CCTTCTCCCAAGAAGGAGTA+TGG | 0.388810 | 8_2:-12926780 | Msa1235150:CDS |
ACTGAAGCGTCAAGAGGAAT+AGG | 0.389532 | 8_2:+12926882 | None:intergenic |
TTTCGATTGATTCTTTGAAC+AGG | 0.390812 | 8_2:-12921980 | Msa1235150:CDS |
GGGAAGAACCTTATTGATTC+GGG | 0.392979 | 8_2:-12922963 | Msa1235150:CDS |
AATGTCTAATTGTAGGTTGC+AGG | 0.396953 | 8_2:-12922032 | Msa1235150:intron |
GTGCTTCCTGGATTTGGAAC+GGG | 0.399166 | 8_2:-12922983 | Msa1235150:CDS |
ACTTAAGAGTTATGTTTAGT+TGG | 0.406432 | 8_2:-12921678 | Msa1235150:three_prime_UTR |
AAAGCTAGCGATGTGGAGTC+TGG | 0.420043 | 8_2:-12921900 | Msa1235150:CDS |
AGCCATTGATTCATCATTCT+GGG | 0.424530 | 8_2:-12926964 | Msa1235150:CDS |
TCCACAAAACCTCGATGGTT+GGG | 0.430228 | 8_2:-12926925 | Msa1235150:CDS |
CAACTGGACAATTCCGTCCT+AGG | 0.440660 | 8_2:-12925045 | Msa1235150:CDS |
GGAAAATGATGAGTGATATG+AGG | 0.441130 | 8_2:+12926828 | None:intergenic |
TCACTTCTCCTTGATTTCAC+TGG | 0.444371 | 8_2:-12926741 | Msa1235150:CDS |
GAATCTGCTCGAAATACAAC+TGG | 0.446191 | 8_2:+12922008 | None:intergenic |
ATTCAATCTCTCCACAGTTA+AGG | 0.455924 | 8_2:-12924978 | Msa1235150:CDS |
AGAAGTTTGGGGACTTAACC+CGG | 0.462716 | 8_2:-12922842 | Msa1235150:CDS |
GTTCTTCCCGTTCCAAATCC+AGG | 0.462945 | 8_2:+12922977 | None:intergenic |
CTTGCGAAGAAAATTCTGAA+TGG | 0.465801 | 8_2:-12922783 | Msa1235150:CDS |
CATCCCAGTATCTTCCTTTG+TGG | 0.468934 | 8_2:+12924464 | None:intergenic |
GCTGCAAATGAAATCTTCAA+TGG | 0.468982 | 8_2:+12921944 | None:intergenic |
TGGCATCCCTTGTGGCTCGT+CGG | 0.472617 | 8_2:-12924417 | Msa1235150:CDS |
GAGAAGTGACTGAAATGAAA+AGG | 0.473027 | 8_2:+12926755 | None:intergenic |
GTTGAAAGATTAAGTTAAGC+CGG | 0.476484 | 8_2:+12922712 | None:intergenic |
AAGGAACCATACTCCTTCTT+GGG | 0.477484 | 8_2:+12926774 | None:intergenic |
CTCCACAAAACCTCGATGGT+TGG | 0.478725 | 8_2:-12926926 | Msa1235150:CDS |
GTCCCAGAATGATGAATCAA+TGG | 0.487363 | 8_2:+12926962 | None:intergenic |
CTCAGCTCCTTCTCCCAAGA+AGG | 0.491627 | 8_2:-12926787 | Msa1235150:CDS |
CCAAACAACACAGATGTTGA+AGG | 0.492018 | 8_2:+12924887 | None:intergenic |
ACACCGCTGTCTCTACTGCC+AGG | 0.495012 | 8_2:-12924322 | Msa1235150:CDS |
ATCGTAAGTAACAGCCGCCT+TGG | 0.496861 | 8_2:+12924291 | None:intergenic |
AACGATGACCAGTGAAATCA+AGG | 0.503727 | 8_2:+12926733 | None:intergenic |
GAAAATGATGAGTGATATGA+GGG | 0.506868 | 8_2:+12926829 | None:intergenic |
CACAACATCATCATCATCAA+TGG | 0.511600 | 8_2:-12927000 | Msa1235150:exon |
CTGAAGCGTCAAGAGGAATA+GGG | 0.513543 | 8_2:+12926883 | None:intergenic |
GATTCTTTGAACAGGAAACA+TGG | 0.515337 | 8_2:-12921972 | Msa1235150:CDS |
TCTGTGTTGTTTGGTTTAGA+GGG | 0.522771 | 8_2:-12924878 | Msa1235150:CDS |
TGAAGTGAAGTGAAGTGAAG+AGG | 0.526440 | 8_2:+12927057 | None:intergenic |
TTGAAAGATTAAGTTAAGCC+GGG | 0.527812 | 8_2:+12922713 | None:intergenic |
TGTGCTTCCTGGATTTGGAA+CGG | 0.527834 | 8_2:-12922984 | Msa1235150:CDS |
TGATATGAGGGAGTTGTTGA+TGG | 0.527979 | 8_2:+12926841 | None:intergenic |
TAAGAACAACGGTAGTCCTC+AGG | 0.529738 | 8_2:-12924368 | Msa1235150:CDS |
ACGATAAGATCAAGTACCTC+TGG | 0.530068 | 8_2:-12924273 | Msa1235150:CDS |
TTGGGAGAAGGAGCTGAGGA+AGG | 0.531214 | 8_2:+12926792 | None:intergenic |
ATTCTAAAATGAACGATGCA+TGG | 0.531505 | 8_2:+12921734 | None:intergenic |
TATCTAGACGAGCATCTACC+CGG | 0.531804 | 8_2:+12922823 | None:intergenic |
GCCGCCTTGGCACATAACCC+TGG | 0.538068 | 8_2:+12924304 | None:intergenic |
AGTTGATTTGGCATCCCTTG+TGG | 0.540341 | 8_2:-12924425 | Msa1235150:CDS |
CCATACTCCTTCTTGGGAGA+AGG | 0.543963 | 8_2:+12926780 | None:intergenic |
AGGGTCACCAGGAACAAACT+TGG | 0.547546 | 8_2:+12926902 | None:intergenic |
TTGATTTCACTGGTCATCGT+TGG | 0.548954 | 8_2:-12926731 | Msa1235150:intron |
ACCATAAGTCCGTGGTAATG+TGG | 0.556100 | 8_2:+12924211 | None:intergenic |
CAAATCAACTGATATAGACT+CGG | 0.556932 | 8_2:+12924438 | None:intergenic |
GAACCTTATTGATTCGGGAG+AGG | 0.559230 | 8_2:-12922958 | Msa1235150:CDS |
GATTAAGTTAAGCCGGGGTG+AGG | 0.564997 | 8_2:+12922719 | None:intergenic |
ATTCTTTGAACAGGAAACAT+GGG | 0.573586 | 8_2:-12921971 | Msa1235150:CDS |
GTTCCAAATCCAGGAAGCAC+AGG | 0.585341 | 8_2:+12922986 | None:intergenic |
TGATGATGATGATGTTGTGC+GGG | 0.585517 | 8_2:+12927004 | None:intergenic |
TTGTTTGGTTTAGAGGGCCA+TGG | 0.586865 | 8_2:-12924872 | Msa1235150:CDS |
CATCATCATCATCAATGGCT+AGG | 0.589680 | 8_2:-12926995 | Msa1235150:exon |
TCAAGAGGAATAGGGTCACC+AGG | 0.593510 | 8_2:+12926891 | None:intergenic |
ATCTTACAGTGGAGGCAGCA+TGG | 0.600522 | 8_2:-12924504 | Msa1235150:CDS |
TCCTCTCCACAAAACCTCGA+TGG | 0.603168 | 8_2:-12926930 | Msa1235150:CDS |
ACTGCCAGGGTTATGTGCCA+AGG | 0.607980 | 8_2:-12924308 | Msa1235150:CDS |
CTTTGCAACGTCCTTAACTG+TGG | 0.610680 | 8_2:+12924967 | None:intergenic |
TGGGAGAAGGAGCTGAGGAA+GGG | 0.611872 | 8_2:+12926793 | None:intergenic |
GCATCCCTTGTGGCTCGTCG+GGG | 0.614398 | 8_2:-12924415 | Msa1235150:CDS |
CACCGCTGTCTCTACTGCCA+GGG | 0.614848 | 8_2:-12924321 | Msa1235150:CDS |
CTGGAGAAACACGGAGACTG+AGG | 0.616034 | 8_2:-12924254 | Msa1235150:CDS |
CAGTCTCCGTGTTTCTCCAG+AGG | 0.618270 | 8_2:+12924257 | None:intergenic |
CTGGAAACTGAAGCGTCAAG+AGG | 0.619867 | 8_2:+12926876 | None:intergenic |
TTAAGCCGGGGTGAGGCTGA+CGG | 0.619931 | 8_2:+12922726 | None:intergenic |
GCAATCCCCGACGAGCCACA+AGG | 0.623218 | 8_2:+12924410 | None:intergenic |
GAAGTTTGGGGACTTAACCC+GGG | 0.623442 | 8_2:-12922841 | Msa1235150:CDS |
GAGGAAGGGATAATGCCAAA+GGG | 0.625924 | 8_2:+12926807 | None:intergenic |
TGATCACGATCTTACAGTGG+AGG | 0.626341 | 8_2:-12924512 | Msa1235150:CDS |
TGAGGAAGGGATAATGCCAA+AGG | 0.630223 | 8_2:+12926806 | None:intergenic |
CAATCCCCGACGAGCCACAA+GGG | 0.631020 | 8_2:+12924411 | None:intergenic |
TTGATGGCGATAGAGTCTGC+TGG | 0.631814 | 8_2:+12926857 | None:intergenic |
GCCAGGGTTATGTGCCAAGG+CGG | 0.636658 | 8_2:-12924305 | Msa1235150:CDS |
CTTCTTGGGAGAAGGAGCTG+AGG | 0.640737 | 8_2:+12926788 | None:intergenic |
GGCTTGTTTCCACATTACCA+CGG | 0.643480 | 8_2:-12924220 | Msa1235150:CDS |
AACAACCGTCAGCCTCACCC+CGG | 0.648424 | 8_2:-12922731 | Msa1235150:CDS |
AAGATTCACAAAGAAGTTTG+GGG | 0.651005 | 8_2:-12922853 | Msa1235150:CDS |
ATTCCAGATACTGCTGCATG+AGG | 0.653346 | 8_2:+12924187 | None:intergenic |
TTCTGATCACGATCTTACAG+TGG | 0.653407 | 8_2:-12924515 | Msa1235150:CDS |
ATCTAGACGAGCATCTACCC+GGG | 0.654861 | 8_2:+12922824 | None:intergenic |
GAGAAACACGGAGACTGAGG+AGG | 0.661282 | 8_2:-12924251 | Msa1235150:CDS |
CAAGTACCTCTGGAGAAACA+CGG | 0.661736 | 8_2:-12924263 | Msa1235150:CDS |
AAATCAACTGATATAGACTC+GGG | 0.662894 | 8_2:+12924439 | None:intergenic |
CAGTTGTTTGTTGACCACAA+AGG | 0.665261 | 8_2:-12924478 | Msa1235150:CDS |
TGACCACAAAGGAAGATACT+GGG | 0.665611 | 8_2:-12924467 | Msa1235150:CDS |
TGAAAGATTAAGTTAAGCCG+GGG | 0.665959 | 8_2:+12922714 | None:intergenic |
TCAGTTGCATTAGTAGCCTG+AGG | 0.666364 | 8_2:+12924352 | None:intergenic |
TGTTCTTATGCATCCCAAAG+CGG | 0.671112 | 8_2:+12924383 | None:intergenic |
TGACCCTAAAGCTAGCGATG+TGG | 0.680404 | 8_2:-12921907 | Msa1235150:CDS |
TTGATGATGATGATGTTGTG+CGG | 0.685767 | 8_2:+12927003 | None:intergenic |
AACCCTGGCAGTAGAGACAG+CGG | 0.710115 | 8_2:+12924319 | None:intergenic |
CATGAGGTACCATAAGTCCG+TGG | 0.716130 | 8_2:+12924203 | None:intergenic |
TTTGGGATGCATAAGAACAA+CGG | 0.717493 | 8_2:-12924379 | Msa1235150:CDS |
GAGACTGAGGAGGAATACGA+AGG | 0.720894 | 8_2:-12924241 | Msa1235150:CDS |
TTGTGGTCAACAAACAACTG+AGG | 0.728374 | 8_2:+12924481 | None:intergenic |
CAAACTTGGCCCAACCATCG+AGG | 0.733200 | 8_2:+12926916 | None:intergenic |
AGGAGATAAAGCAAACTGTG+AGG | 0.736725 | 8_2:+12924907 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATTGGATTTTTTTTTT+TGG | - | chr8_2:12922042-12922061 | Msa1235150:intron | 10.0% |
!!! | AAAATTGGATTTTTTTTTTT+GGG | - | chr8_2:12922043-12922062 | Msa1235150:intron | 10.0% |
!!! | TTCAAACATTTTAATCATAA+TGG | - | chr8_2:12921981-12922000 | Msa1235150:CDS | 15.0% |
!!! | TCAAACATTTTAATCATAAT+GGG | - | chr8_2:12921982-12922001 | Msa1235150:CDS | 15.0% |
!!! | AAAGAAGCATATAAAAAAAA+CGG | + | chr8_2:12922022-12922041 | None:intergenic | 15.0% |
!!! | TTATATGCTTCTTTAAAAAT+TGG | - | chr8_2:12922028-12922047 | Msa1235150:intron | 15.0% |
!!! | AAATTGGATTTTTTTTTTTG+GGG | - | chr8_2:12922533-12922552 | Msa1235150:intron | 15.0% |
!! | TGTATTATTTGAATTTGAAT+GGG | - | chr8_2:12922743-12922762 | Msa1235150:CDS | 15.0% |
!! | TCATTTCTTGAATAAAAAAT+AGG | - | chr8_2:12922883-12922902 | Msa1235150:CDS | 15.0% |
!! | AATTTATCTTCTTCAATATA+AGG | - | chr8_2:12923059-12923078 | Msa1235150:intron | 15.0% |
!!! | TTTTATAGATTACATAAACA+TGG | + | chr8_2:12923493-12923512 | None:intergenic | 15.0% |
!!! | ATATTTTTCAATTTCAGAAA+AGG | + | chr8_2:12923955-12923974 | None:intergenic | 15.0% |
!! | TTTCATTTACTATTTGATTA+AGG | + | chr8_2:12924805-12924824 | None:intergenic | 15.0% |
!! | AATCAAATAGTAAATGAAAT+AGG | - | chr8_2:12924806-12924825 | Msa1235150:intron | 15.0% |
!!! | ATTTATTGTGTTGATTTTTT+TGG | - | chr8_2:12924913-12924932 | Msa1235150:CDS | 15.0% |
!! | TTAATTCAATATACTGAAAT+TGG | - | chr8_2:12926487-12926506 | Msa1235150:intron | 15.0% |
!! | GAAATGAAAATACAATATTA+AGG | - | chr8_2:12926562-12926581 | Msa1235150:intron | 15.0% |
!!! | AAAAATAACAAAAGTGTAAT+TGG | + | chr8_2:12926998-12927017 | None:intergenic | 15.0% |
!! | AATGAAACTTTAGACAATTT+AGG | - | chr8_2:12922116-12922135 | Msa1235150:intron | 20.0% |
!! | AGAAAAAAATGTTAACAAAC+AGG | - | chr8_2:12922407-12922426 | Msa1235150:intron | 20.0% |
!! | TTATAAGCTATAAGCTTAAA+GGG | - | chr8_2:12922450-12922469 | Msa1235150:intron | 20.0% |
!!! | TGTTATGCTTCTTTAAAAAT+TGG | - | chr8_2:12922517-12922536 | Msa1235150:intron | 20.0% |
!!! | AATTGGATTTTTTTTTTTGG+GGG | - | chr8_2:12922534-12922553 | Msa1235150:intron | 20.0% |
!! | TTTCAATTTCTTACTTTGAT+GGG | - | chr8_2:12922597-12922616 | Msa1235150:intron | 20.0% |
!! | GTGTATTATTTGAATTTGAA+TGG | - | chr8_2:12922742-12922761 | Msa1235150:CDS | 20.0% |
!!! | TGTTTAGCTTTTAATTCATT+TGG | + | chr8_2:12922770-12922789 | None:intergenic | 20.0% |
!! | TTATGTTAATACAAAAGAAG+AGG | - | chr8_2:12922795-12922814 | Msa1235150:CDS | 20.0% |
!! | TATGTTAATACAAAAGAAGA+GGG | - | chr8_2:12922796-12922815 | Msa1235150:CDS | 20.0% |
!! | TTTATTCAAGAAATGAGAAT+TGG | + | chr8_2:12922879-12922898 | None:intergenic | 20.0% |
!!! | TATGTTTTGATCATTAGTTT+TGG | - | chr8_2:12923029-12923048 | Msa1235150:intron | 20.0% |
!! | AAATATCGTACTTCATATAT+TGG | - | chr8_2:12923099-12923118 | Msa1235150:intron | 20.0% |
!!! | GTTTCTTATTTCACTATATT+CGG | - | chr8_2:12923414-12923433 | Msa1235150:intron | 20.0% |
!! | ATGTAATCTATAAAACATCA+TGG | - | chr8_2:12923498-12923517 | Msa1235150:intron | 20.0% |
!!! | TTATTTTTCATTATCTGATG+TGG | - | chr8_2:12923845-12923864 | Msa1235150:intron | 20.0% |
!! | CAACTCATAATACTATAAAT+TGG | - | chr8_2:12923979-12923998 | Msa1235150:intron | 20.0% |
!!! | TCTTTTTCATTTTTATGGTT+CGG | - | chr8_2:12924546-12924565 | Msa1235150:intron | 20.0% |
!! | AGAGAGAATAAAACATAAAA+GGG | + | chr8_2:12924624-12924643 | None:intergenic | 20.0% |
!! | AAGAGAGAATAAAACATAAA+AGG | + | chr8_2:12924625-12924644 | None:intergenic | 20.0% |
!!! | TCTTTTTTTGCTAGAATTAT+AGG | - | chr8_2:12924641-12924660 | Msa1235150:intron | 20.0% |
!! | AATAAACTCTTATTGGATTA+AGG | + | chr8_2:12925064-12925083 | None:intergenic | 20.0% |
!! | TTAATCCAATAAGAGTTTAT+TGG | - | chr8_2:12925063-12925082 | Msa1235150:intron | 20.0% |
!! | TAATCCAATAAGAGTTTATT+GGG | - | chr8_2:12925064-12925083 | Msa1235150:intron | 20.0% |
!!! | ACATTTTGTTTATAAAAGAG+AGG | - | chr8_2:12925107-12925126 | Msa1235150:intron | 20.0% |
!!! | CATTTTGTTTATAAAAGAGA+GGG | - | chr8_2:12925108-12925127 | Msa1235150:intron | 20.0% |
!!! | AAGTTTTTTAAGAGTTTGTT+AGG | - | chr8_2:12925156-12925175 | Msa1235150:intron | 20.0% |
!! | TAATTATGTTACAAACTACT+TGG | - | chr8_2:12925382-12925401 | Msa1235150:intron | 20.0% |
!!! | TCTAGATTTTGCATAATTTT+CGG | + | chr8_2:12925412-12925431 | None:intergenic | 20.0% |
!! | TTATGGTTCATAATAAATTC+AGG | - | chr8_2:12925614-12925633 | Msa1235150:intron | 20.0% |
!!! | GTAACTGTAAAGAATTTTTA+CGG | - | chr8_2:12926260-12926279 | Msa1235150:intron | 20.0% |
!! | CTATACTATTCAAATGAAAA+AGG | - | chr8_2:12926431-12926450 | Msa1235150:intron | 20.0% |
!!! | AAAAATCAACTAACTCATTT+TGG | + | chr8_2:12926921-12926940 | None:intergenic | 20.0% |
!! | ATTGAAAATTTAATTGCAAC+AGG | - | chr8_2:12927053-12927072 | Msa1235150:five_prime_UTR | 20.0% |
!! | TTTAATTTACTTGAGCATGA+TGG | - | chr8_2:12922091-12922110 | Msa1235150:intron | 25.0% |
! | TTATGGATAGTTAATAAGCT+AGG | - | chr8_2:12922156-12922175 | Msa1235150:intron | 25.0% |
! | ATAGTTAATAAGCTAGGTTA+TGG | - | chr8_2:12922162-12922181 | Msa1235150:intron | 25.0% |
! | CTGATTGAATTTGTAATGTT+TGG | - | chr8_2:12922243-12922262 | Msa1235150:intron | 25.0% |
! | GTAATGTTTGGTAAATTTAG+TGG | - | chr8_2:12922255-12922274 | Msa1235150:intron | 25.0% |
! | ATTACAGAGTTAAAATTGAG+AGG | - | chr8_2:12922352-12922371 | Msa1235150:intron | 25.0% |
! | CTTATAAGCTATAAGCTTAA+AGG | - | chr8_2:12922449-12922468 | Msa1235150:intron | 25.0% |
!! | AAAGAAGCATAACAAAAAAC+AGG | + | chr8_2:12922511-12922530 | None:intergenic | 25.0% |
!!! | ATTGGATTTTTTTTTTTGGG+GGG | - | chr8_2:12922535-12922554 | Msa1235150:intron | 25.0% |
! | GTTTCAATTTCTTACTTTGA+TGG | - | chr8_2:12922596-12922615 | Msa1235150:intron | 25.0% |
! | TTCAATTTCTTACTTTGATG+GGG | - | chr8_2:12922598-12922617 | Msa1235150:intron | 25.0% |
! | CTTGAATAAAAAATAGGAGT+TGG | - | chr8_2:12922889-12922908 | Msa1235150:CDS | 25.0% |
!! | ATATCAACTATCATTTTCCT+AGG | + | chr8_2:12923603-12923622 | None:intergenic | 25.0% |
!!! | ACAAGTCACTTTTTTCATAT+GGG | - | chr8_2:12923694-12923713 | Msa1235150:intron | 25.0% |
!!! | TCAACATTTTGAGAGTATAA+AGG | + | chr8_2:12923892-12923911 | None:intergenic | 25.0% |
!!! | ACCACTCTTTTTCATTTTTA+TGG | - | chr8_2:12924541-12924560 | Msa1235150:intron | 25.0% |
! | ACCATAAAAATGAAAAAGAG+TGG | + | chr8_2:12924545-12924564 | None:intergenic | 25.0% |
! | TTTGCTAGAATTATAGGATT+AGG | - | chr8_2:12924647-12924666 | Msa1235150:intron | 25.0% |
! | ATAGGATTAGGTAAAGAAAA+AGG | - | chr8_2:12924659-12924678 | Msa1235150:intron | 25.0% |
! | TTGATTAAGGATTAAAAGTC+CGG | + | chr8_2:12924792-12924811 | None:intergenic | 25.0% |
! | AAATATGAAAATCACTCTGA+TGG | - | chr8_2:12924839-12924858 | Msa1235150:CDS | 25.0% |
! | AATATGAAAATCACTCTGAT+GGG | - | chr8_2:12924840-12924859 | Msa1235150:CDS | 25.0% |
! | AAATCAACACAATAAATCTC+AGG | + | chr8_2:12924910-12924929 | None:intergenic | 25.0% |
! | GATAGAACTAGTAAATTCAA+AGG | + | chr8_2:12925318-12925337 | None:intergenic | 25.0% |
!!! | TTTACTAGTTCTATCAAACT+CGG | - | chr8_2:12925323-12925342 | Msa1235150:intron | 25.0% |
!! | TAGATTTTGCATAATTTTCG+GGG | + | chr8_2:12925410-12925429 | None:intergenic | 25.0% |
!! | CTAGATTTTGCATAATTTTC+GGG | + | chr8_2:12925411-12925430 | None:intergenic | 25.0% |
! | AATCTAGACATGCTAATAAT+AGG | - | chr8_2:12925424-12925443 | Msa1235150:intron | 25.0% |
! | ACTTATGGAATCAATATGAA+TGG | - | chr8_2:12925471-12925490 | Msa1235150:intron | 25.0% |
!! | AATCAATATGAATGGATTCA+AGG | - | chr8_2:12925479-12925498 | Msa1235150:intron | 25.0% |
! | AGAGTTTGTATGAAAATCAA+GGG | + | chr8_2:12925533-12925552 | None:intergenic | 25.0% |
! | AAGAGTTTGTATGAAAATCA+AGG | + | chr8_2:12925534-12925553 | None:intergenic | 25.0% |
!! | AGATTTAATGCCGAAATTTT+TGG | - | chr8_2:12925725-12925744 | Msa1235150:intron | 25.0% |
! | TAACTTAATCTTTCAACAAC+AGG | - | chr8_2:12925922-12925941 | Msa1235150:intron | 25.0% |
! | TTCAGTTGTTTATCCAAAAA+TGG | + | chr8_2:12925994-12926013 | None:intergenic | 25.0% |
!! | AATCTTGTTTATGATCTTCA+TGG | - | chr8_2:12926381-12926400 | Msa1235150:intron | 25.0% |
! | TACTATTCAAATGAAAAAGG+AGG | - | chr8_2:12926434-12926453 | Msa1235150:intron | 25.0% |
! | AATTAATCAACATTTCACTG+CGG | + | chr8_2:12926473-12926492 | None:intergenic | 25.0% |
!! | TTTTCGAAATGTCTAATTGT+AGG | - | chr8_2:12926589-12926608 | Msa1235150:intron | 25.0% |
! | ATGCATGAAAGTTACAAAAA+TGG | + | chr8_2:12926840-12926859 | None:intergenic | 25.0% |
! | ACTTAAGAGTTATGTTTAGT+TGG | - | chr8_2:12926950-12926969 | Msa1235150:CDS | 25.0% |
GAAAATGATGAGTGATATGA+GGG | + | chr8_2:12921802-12921821 | None:intergenic | 30.0% | |
TAGACAATTTAGGCTATGTT+TGG | - | chr8_2:12922126-12922145 | Msa1235150:intron | 30.0% | |
CTATGTTTGGCAAGAAATTA+TGG | - | chr8_2:12922139-12922158 | Msa1235150:intron | 30.0% | |
TGTTTGGTAAATTTAGTGGT+TGG | - | chr8_2:12922259-12922278 | Msa1235150:intron | 30.0% | |
GGTTATTGAATGGCTTAAAT+GGG | - | chr8_2:12922562-12922581 | Msa1235150:intron | 30.0% | |
GTTATTGAATGGCTTAAATG+GGG | - | chr8_2:12922563-12922582 | Msa1235150:intron | 30.0% | |
TTATTGAATGGCTTAAATGG+GGG | - | chr8_2:12922564-12922583 | Msa1235150:intron | 30.0% | |
TCAATTTCTTACTTTGATGG+GGG | - | chr8_2:12922599-12922618 | Msa1235150:intron | 30.0% | |
!! | ATGTTTGATCTTGTTGTTGA+TGG | - | chr8_2:12922700-12922719 | Msa1235150:intron | 30.0% |
ACATTGTCTCATATTGTTAC+TGG | - | chr8_2:12923254-12923273 | Msa1235150:intron | 30.0% | |
! | ATTATGAGTACGTTGATAAG+TGG | + | chr8_2:12923458-12923477 | None:intergenic | 30.0% |
AGCTTAATTATGGTCGATAT+AGG | - | chr8_2:12923550-12923569 | Msa1235150:intron | 30.0% | |
TTAATTATGGTCGATATAGG+TGG | - | chr8_2:12923553-12923572 | Msa1235150:intron | 30.0% | |
!!! | GACAAGTCACTTTTTTCATA+TGG | - | chr8_2:12923693-12923712 | Msa1235150:intron | 30.0% |
!!! | GAAAAAACACCACTTTTTTG+CGG | + | chr8_2:12923797-12923816 | None:intergenic | 30.0% |
!!! | CAAAAAAGTGGTGTTTTTTC+AGG | - | chr8_2:12923797-12923816 | Msa1235150:intron | 30.0% |
AGTATAAAGGAAGTCTATCA+TGG | + | chr8_2:12923879-12923898 | None:intergenic | 30.0% | |
CTATAAATTGGATCATGCAA+TGG | - | chr8_2:12923991-12924010 | Msa1235150:intron | 30.0% | |
AAATCAACTGATATAGACTC+GGG | + | chr8_2:12924192-12924211 | None:intergenic | 30.0% | |
CAAATCAACTGATATAGACT+CGG | + | chr8_2:12924193-12924212 | None:intergenic | 30.0% | |
CATTAGTATGTTTGTGTACT+CGG | - | chr8_2:12924516-12924535 | Msa1235150:CDS | 30.0% | |
GAAAAAGGAGAACATAGTTA+AGG | - | chr8_2:12924674-12924693 | Msa1235150:intron | 30.0% | |
!!! | GTCCTTTTTTATCATAGTAC+CGG | - | chr8_2:12924770-12924789 | Msa1235150:intron | 30.0% |
!!! | ATTTTTTTGGTCTTAACCTC+TGG | - | chr8_2:12924926-12924945 | Msa1235150:CDS | 30.0% |
ATCATGACTGAAACAATCAT+TGG | + | chr8_2:12925012-12925031 | None:intergenic | 30.0% | |
ATGTCCCAATAAACTCTTAT+TGG | + | chr8_2:12925071-12925090 | None:intergenic | 30.0% | |
CAAAATGTTCCTAAAACTCA+GGG | + | chr8_2:12925095-12925114 | None:intergenic | 30.0% | |
ACAAAATGTTCCTAAAACTC+AGG | + | chr8_2:12925096-12925115 | None:intergenic | 30.0% | |
CAAAGGTAACACTGTATTAT+TGG | + | chr8_2:12925301-12925320 | None:intergenic | 30.0% | |
!! | CATATTGATTCCATAAGTGA+GGG | + | chr8_2:12925469-12925488 | None:intergenic | 30.0% |
!! | TCATATTGATTCCATAAGTG+AGG | + | chr8_2:12925470-12925489 | None:intergenic | 30.0% |
GAGTTTGTATGAAAATCAAG+GGG | + | chr8_2:12925532-12925551 | None:intergenic | 30.0% | |
! | ATACAAACTCTTTTCGTCAT+CGG | - | chr8_2:12925542-12925561 | Msa1235150:intron | 30.0% |
CGGCAATTATGTTATTGTTA+TGG | - | chr8_2:12925597-12925616 | Msa1235150:intron | 30.0% | |
GCAAACTGAACCAAAAATTT+CGG | + | chr8_2:12925738-12925757 | None:intergenic | 30.0% | |
GAAGATTCACAAAGAAGTTT+GGG | - | chr8_2:12925774-12925793 | Msa1235150:intron | 30.0% | |
AAGATTCACAAAGAAGTTTG+GGG | - | chr8_2:12925775-12925794 | Msa1235150:intron | 30.0% | |
TTGAAAGATTAAGTTAAGCC+GGG | + | chr8_2:12925918-12925937 | None:intergenic | 30.0% | |
GTTGAAAGATTAAGTTAAGC+CGG | + | chr8_2:12925919-12925938 | None:intergenic | 30.0% | |
AAAGATAGTTGCTCTTATCA+AGG | + | chr8_2:12925958-12925977 | None:intergenic | 30.0% | |
TGATAAGAGCAACTATCTTT+AGG | - | chr8_2:12925958-12925977 | Msa1235150:intron | 30.0% | |
AACTATCTTTAGGTGTCTTT+AGG | - | chr8_2:12925968-12925987 | Msa1235150:intron | 30.0% | |
! | GTAAAGAATTTTTACGGAGT+AGG | - | chr8_2:12926266-12926285 | Msa1235150:intron | 30.0% |
TCATTTGAATAGTATAGCCA+AGG | + | chr8_2:12926428-12926447 | None:intergenic | 30.0% | |
TTCAAATGAAAAAGGAGGAA+CGG | - | chr8_2:12926439-12926458 | Msa1235150:intron | 30.0% | |
TCATTTCTGAATCATAGCTA+TGG | + | chr8_2:12926549-12926568 | None:intergenic | 30.0% | |
CAAAGAATCAATCGAAATTC+TGG | + | chr8_2:12926645-12926664 | None:intergenic | 30.0% | |
! | TTTCGATTGATTCTTTGAAC+AGG | - | chr8_2:12926648-12926667 | Msa1235150:intron | 30.0% |
ATTCTTTGAACAGGAAACAT+GGG | - | chr8_2:12926657-12926676 | Msa1235150:intron | 30.0% | |
TATTCACCAAAAAGGAATGA+AGG | - | chr8_2:12926767-12926786 | Msa1235150:CDS | 30.0% | |
ATTCACCAAAAAGGAATGAA+GGG | - | chr8_2:12926768-12926787 | Msa1235150:CDS | 30.0% | |
!! | ATGCACTTTTTAATGCAAGA+GGG | - | chr8_2:12926858-12926877 | Msa1235150:CDS | 30.0% |
!! | ATTCTAAAATGAACGATGCA+TGG | + | chr8_2:12926897-12926916 | None:intergenic | 30.0% |
!!! | GAAGAGGTTTTGTTTTGTTG+AGG | + | chr8_2:12921558-12921577 | None:intergenic | 35.0% |
!! | TTGATGATGATGATGTTGTG+CGG | + | chr8_2:12921628-12921647 | None:intergenic | 35.0% |
CACAACATCATCATCATCAA+TGG | - | chr8_2:12921628-12921647 | Msa1235150:three_prime_UTR | 35.0% | |
!! | AGCCATTGATTCATCATTCT+GGG | - | chr8_2:12921664-12921683 | Msa1235150:three_prime_UTR | 35.0% |
GGAAAATGATGAGTGATATG+AGG | + | chr8_2:12921803-12921822 | None:intergenic | 35.0% | |
! | ATCACTCATCATTTTCCCTT+TGG | - | chr8_2:12921806-12921825 | Msa1235150:three_prime_UTR | 35.0% |
GAGAAGTGACTGAAATGAAA+AGG | + | chr8_2:12921876-12921895 | None:intergenic | 35.0% | |
! | ATAAGCTAGCTTGTAGCTTA+TGG | - | chr8_2:12922209-12922228 | Msa1235150:intron | 35.0% |
! | TAAGCTAGCTTGTAGCTTAT+GGG | - | chr8_2:12922210-12922229 | Msa1235150:intron | 35.0% |
TAAGCTATAAGCTTAAAGGG+TGG | - | chr8_2:12922453-12922472 | Msa1235150:intron | 35.0% | |
!!! | GATTTTTTTTTTTGGGGGGT+GGG | - | chr8_2:12922539-12922558 | Msa1235150:intron | 35.0% |
!!! | ATTTTTTTTTTTGGGGGGTG+GGG | - | chr8_2:12922540-12922559 | Msa1235150:intron | 35.0% |
GGGTTATTGAATGGCTTAAA+TGG | - | chr8_2:12922561-12922580 | Msa1235150:intron | 35.0% | |
TATTGAATGGCTTAAATGGG+GGG | - | chr8_2:12922565-12922584 | Msa1235150:intron | 35.0% | |
!! | TTTGATCTTGTTGTTGATGG+TGG | - | chr8_2:12922703-12922722 | Msa1235150:intron | 35.0% |
!! | TTGATCTTGTTGTTGATGGT+GGG | - | chr8_2:12922704-12922723 | Msa1235150:intron | 35.0% |
TCCAATATCCATGTTTGTGT+CGG | - | chr8_2:12922929-12922948 | Msa1235150:CDS | 35.0% | |
TCCAATATCTGTGTTTGTGT+CGG | - | chr8_2:12923297-12923316 | Msa1235150:intron | 35.0% | |
GCACTCATACAGCTTAATTA+TGG | - | chr8_2:12923540-12923559 | Msa1235150:intron | 35.0% | |
! | CAACTATCATTTTCCTAGGA+CGG | + | chr8_2:12923599-12923618 | None:intergenic | 35.0% |
ATTCAATCTCTCCACAGTTA+AGG | - | chr8_2:12923650-12923669 | Msa1235150:intron | 35.0% | |
!! | ATCTGTGTTGTTTGGTTTAG+AGG | - | chr8_2:12923749-12923768 | Msa1235150:intron | 35.0% |
!! | TCTGTGTTGTTTGGTTTAGA+GGG | - | chr8_2:12923750-12923769 | Msa1235150:intron | 35.0% |
!!! | AAAAGTGGTGTTTTTTCAGG+AGG | - | chr8_2:12923800-12923819 | Msa1235150:intron | 35.0% |
AATTGGATCATGCAATGGTT+TGG | - | chr8_2:12923996-12924015 | Msa1235150:intron | 35.0% | |
CGAGTCTATATCAGTTGATT+TGG | - | chr8_2:12924191-12924210 | Msa1235150:CDS | 35.0% | |
! | TTTGGGATGCATAAGAACAA+CGG | - | chr8_2:12924249-12924268 | Msa1235150:CDS | 35.0% |
CGAGTACACAAACATACTAA+TGG | + | chr8_2:12924518-12924537 | None:intergenic | 35.0% | |
GTCCGGTACTATGATAAAAA+AGG | + | chr8_2:12924775-12924794 | None:intergenic | 35.0% | |
GTCATGATTCAAACTGTGAT+AGG | - | chr8_2:12925024-12925043 | Msa1235150:CDS | 35.0% | |
! | GTTAGGAGAGAAATTTTCTC+TGG | - | chr8_2:12925173-12925192 | Msa1235150:intron | 35.0% |
! | AGAGAAATTTTCTCTGGTCT+AGG | - | chr8_2:12925179-12925198 | Msa1235150:intron | 35.0% |
TGATCTAGAAGCTCTTACAA+TGG | + | chr8_2:12925266-12925285 | None:intergenic | 35.0% | |
GTAACACTGTATTATTGGAC+TGG | + | chr8_2:12925296-12925315 | None:intergenic | 35.0% | |
!!! | GTTTGCTATACTTTTCAGCA+AGG | - | chr8_2:12925752-12925771 | Msa1235150:intron | 35.0% |
GGAAGATTCACAAAGAAGTT+TGG | - | chr8_2:12925773-12925792 | Msa1235150:intron | 35.0% | |
CTAGATATATCTTCAGCTTC+TGG | - | chr8_2:12925821-12925840 | Msa1235150:intron | 35.0% | |
CTTGCGAAGAAAATTCTGAA+TGG | - | chr8_2:12925845-12925864 | Msa1235150:intron | 35.0% | |
TGAAAGATTAAGTTAAGCCG+GGG | + | chr8_2:12925917-12925936 | None:intergenic | 35.0% | |
! | TCTGTTTTCATAAGCTACCT+TGG | - | chr8_2:12926113-12926132 | Msa1235150:intron | 35.0% |
GAGTTTATGGGAACAACTTA+TGG | + | chr8_2:12926155-12926174 | None:intergenic | 35.0% | |
! | ATAAACATTCGTGACTGGTT+GGG | + | chr8_2:12926179-12926198 | None:intergenic | 35.0% |
! | AATTTTTACGGAGTAGGAAG+AGG | - | chr8_2:12926272-12926291 | Msa1235150:intron | 35.0% |
AATGTCTAATTGTAGGTTGC+AGG | - | chr8_2:12926596-12926615 | Msa1235150:intron | 35.0% | |
GATTCTTTGAACAGGAAACA+TGG | - | chr8_2:12926656-12926675 | Msa1235150:intron | 35.0% | |
GCTGCAAATGAAATCTTCAA+TGG | + | chr8_2:12926687-12926706 | None:intergenic | 35.0% | |
AGTCTGGAAAAATTGTTGCT+TGG | - | chr8_2:12926744-12926763 | Msa1235150:CDS | 35.0% | |
TTGCTTGGTATTCACCAAAA+AGG | - | chr8_2:12926759-12926778 | Msa1235150:CDS | 35.0% | |
!! | CATGCACTTTTTAATGCAAG+AGG | - | chr8_2:12926857-12926876 | Msa1235150:CDS | 35.0% |
TGAAGTGAAGTGAAGTGAAG+AGG | + | chr8_2:12921574-12921593 | None:intergenic | 40.0% | |
! | TGATGATGATGATGTTGTGC+GGG | + | chr8_2:12921627-12921646 | None:intergenic | 40.0% |
CATCATCATCATCAATGGCT+AGG | - | chr8_2:12921633-12921652 | Msa1235150:three_prime_UTR | 40.0% | |
!! | CAGCCATTGATTCATCATTC+TGG | - | chr8_2:12921663-12921682 | Msa1235150:three_prime_UTR | 40.0% |
GTCCCAGAATGATGAATCAA+TGG | + | chr8_2:12921669-12921688 | None:intergenic | 40.0% | |
TGATATGAGGGAGTTGTTGA+TGG | + | chr8_2:12921790-12921809 | None:intergenic | 40.0% | |
AAGGAACCATACTCCTTCTT+GGG | + | chr8_2:12921857-12921876 | None:intergenic | 40.0% | |
AAAGGAACCATACTCCTTCT+TGG | + | chr8_2:12921858-12921877 | None:intergenic | 40.0% | |
TCACTTCTCCTTGATTTCAC+TGG | - | chr8_2:12921887-12921906 | Msa1235150:CDS | 40.0% | |
AACGATGACCAGTGAAATCA+AGG | + | chr8_2:12921898-12921917 | None:intergenic | 40.0% | |
TTGATTTCACTGGTCATCGT+TGG | - | chr8_2:12921897-12921916 | Msa1235150:CDS | 40.0% | |
! | AAGCTAGCTTGTAGCTTATG+GGG | - | chr8_2:12922211-12922230 | Msa1235150:intron | 40.0% |
!! | AGGGTGGTTTCTGTTTTTCA+TGG | - | chr8_2:12922469-12922488 | Msa1235150:intron | 40.0% |
!! | GGGTGGTTTCTGTTTTTCAT+GGG | - | chr8_2:12922470-12922489 | Msa1235150:intron | 40.0% |
!!! | GGATTTTTTTTTTTGGGGGG+TGG | - | chr8_2:12922538-12922557 | Msa1235150:intron | 40.0% |
!!! | TTTTTTTTTTTGGGGGGTGG+GGG | - | chr8_2:12922541-12922560 | Msa1235150:intron | 40.0% |
ACCGACACAAACATGGATAT+TGG | + | chr8_2:12922933-12922952 | None:intergenic | 40.0% | |
CTAAACATGTGATGTCGTGT+TGG | + | chr8_2:12923218-12923237 | None:intergenic | 40.0% | |
ACCGACACAAACACAGATAT+TGG | + | chr8_2:12923301-12923320 | None:intergenic | 40.0% | |
AGGAGATAAAGCAAACTGTG+AGG | + | chr8_2:12923724-12923743 | None:intergenic | 40.0% | |
CCAAACAACACAGATGTTGA+AGG | + | chr8_2:12923744-12923763 | None:intergenic | 40.0% | |
! | CCTTCAACATCTGTGTTGTT+TGG | - | chr8_2:12923741-12923760 | Msa1235150:intron | 40.0% |
TTCTGATCACGATCTTACAG+TGG | - | chr8_2:12924113-12924132 | Msa1235150:intron | 40.0% | |
TTGTGGTCAACAAACAACTG+AGG | + | chr8_2:12924150-12924169 | None:intergenic | 40.0% | |
! | CAGTTGTTTGTTGACCACAA+AGG | - | chr8_2:12924150-12924169 | Msa1235150:intron | 40.0% |
TTGACCACAAAGGAAGATAC+TGG | - | chr8_2:12924160-12924179 | Msa1235150:intron | 40.0% | |
TGACCACAAAGGAAGATACT+GGG | - | chr8_2:12924161-12924180 | Msa1235150:intron | 40.0% | |
TGTTCTTATGCATCCCAAAG+CGG | + | chr8_2:12924248-12924267 | None:intergenic | 40.0% | |
ACGATAAGATCAAGTACCTC+TGG | - | chr8_2:12924355-12924374 | Msa1235150:CDS | 40.0% | |
! | GCAGCAGTATCTGGAATTAT+TGG | - | chr8_2:12924447-12924466 | Msa1235150:CDS | 40.0% |
GGATCTGGTAATACGGAATT+CGG | - | chr8_2:12924964-12924983 | Msa1235150:CDS | 40.0% | |
GTTACAAACTCCCTCACTTA+TGG | - | chr8_2:12925456-12925475 | Msa1235150:intron | 40.0% | |
TTTCGTCATCGGTGAATTGA+TGG | - | chr8_2:12925553-12925572 | Msa1235150:intron | 40.0% | |
! | CGGGAAGAACCTTATTGATT+CGG | - | chr8_2:12925664-12925683 | Msa1235150:intron | 40.0% |
!! | GGGAAGAACCTTATTGATTC+GGG | - | chr8_2:12925665-12925684 | Msa1235150:intron | 40.0% |
TTTCTTCTCTTTGACACAGC+TGG | + | chr8_2:12925698-12925717 | None:intergenic | 40.0% | |
!! | AGGTGTCTTTAGGCCATTTT+TGG | - | chr8_2:12925978-12925997 | Msa1235150:intron | 40.0% |
! | TAAACATTCGTGACTGGTTG+GGG | + | chr8_2:12926178-12926197 | None:intergenic | 40.0% |
CATAAACATTCGTGACTGGT+TGG | + | chr8_2:12926180-12926199 | None:intergenic | 40.0% | |
TCAGCATAAACATTCGTGAC+TGG | + | chr8_2:12926184-12926203 | None:intergenic | 40.0% | |
AACCATGATTGTAGACACCT+TGG | - | chr8_2:12926408-12926427 | Msa1235150:intron | 40.0% | |
CTGAAATTGGCATTGTGTTC+CGG | - | chr8_2:12926500-12926519 | Msa1235150:intron | 40.0% | |
GAATCTGCTCGAAATACAAC+TGG | + | chr8_2:12926623-12926642 | None:intergenic | 40.0% | |
ACCAAAAAGGAATGAAGGGA+TGG | - | chr8_2:12926772-12926791 | Msa1235150:CDS | 40.0% | |
! | ACCATCCCTTCATTCCTTTT+TGG | + | chr8_2:12926776-12926795 | None:intergenic | 40.0% |
TCCACAAAACCTCGATGGTT+GGG | - | chr8_2:12921703-12921722 | Msa1235150:three_prime_UTR | 45.0% | |
! | CTGAAGCGTCAAGAGGAATA+GGG | + | chr8_2:12921748-12921767 | None:intergenic | 45.0% |
! | ACTGAAGCGTCAAGAGGAAT+AGG | + | chr8_2:12921749-12921768 | None:intergenic | 45.0% |
GAGGAAGGGATAATGCCAAA+GGG | + | chr8_2:12921824-12921843 | None:intergenic | 45.0% | |
TGAGGAAGGGATAATGCCAA+AGG | + | chr8_2:12921825-12921844 | None:intergenic | 45.0% | |
AAGCTAGGTTATGGCGAATG+AGG | - | chr8_2:12922171-12922190 | Msa1235150:intron | 45.0% | |
!! | ATGAAGCACCGACACAAACA+TGG | + | chr8_2:12922940-12922959 | None:intergenic | 45.0% |
! | GCACTGACACTTCAGATTGA+AGG | - | chr8_2:12923157-12923176 | Msa1235150:intron | 45.0% |
CTTTGCAACGTCCTTAACTG+TGG | + | chr8_2:12923664-12923683 | None:intergenic | 45.0% | |
! | TTGTTTGGTTTAGAGGGCCA+TGG | - | chr8_2:12923756-12923775 | Msa1235150:intron | 45.0% |
!! | GGCGCTTTTCTTTTTCACCA+TGG | + | chr8_2:12923776-12923795 | None:intergenic | 45.0% |
!! | AGAAAAGCGCCGCAAAAAAG+TGG | - | chr8_2:12923785-12923804 | Msa1235150:intron | 45.0% |
TGATCACGATCTTACAGTGG+AGG | - | chr8_2:12924116-12924135 | Msa1235150:intron | 45.0% | |
CATCCCAGTATCTTCCTTTG+TGG | + | chr8_2:12924167-12924186 | None:intergenic | 45.0% | |
!! | AGTTGATTTGGCATCCCTTG+TGG | - | chr8_2:12924203-12924222 | Msa1235150:CDS | 45.0% |
TAAGAACAACGGTAGTCCTC+AGG | - | chr8_2:12924260-12924279 | Msa1235150:CDS | 45.0% | |
TCAGTTGCATTAGTAGCCTG+AGG | + | chr8_2:12924279-12924298 | None:intergenic | 45.0% | |
! | CAAGTACCTCTGGAGAAACA+CGG | - | chr8_2:12924365-12924384 | Msa1235150:CDS | 45.0% |
! | GGCTTGTTTCCACATTACCA+CGG | - | chr8_2:12924408-12924427 | Msa1235150:CDS | 45.0% |
TCCACATTACCACGGACTTA+TGG | - | chr8_2:12924416-12924435 | Msa1235150:CDS | 45.0% | |
! | ACCATAAGTCCGTGGTAATG+TGG | + | chr8_2:12924420-12924439 | None:intergenic | 45.0% |
ATTCCAGATACTGCTGCATG+AGG | + | chr8_2:12924444-12924463 | None:intergenic | 45.0% | |
GGAAAGGGGATCTGGTAATA+CGG | - | chr8_2:12924957-12924976 | Msa1235150:CDS | 45.0% | |
CTGGTAATACGGAATTCGGA+CGG | - | chr8_2:12924968-12924987 | Msa1235150:CDS | 45.0% | |
TGGTAATACGGAATTCGGAC+GGG | - | chr8_2:12924969-12924988 | Msa1235150:CDS | 45.0% | |
TTCAAACTGTGATAGGACCC+TGG | - | chr8_2:12925031-12925050 | Msa1235150:CDS | 45.0% | |
TCAAACTGTGATAGGACCCT+GGG | - | chr8_2:12925032-12925051 | Msa1235150:CDS | 45.0% | |
! | TGGGACATTCCCTGAGTTTT+AGG | - | chr8_2:12925083-12925102 | Msa1235150:intron | 45.0% |
AAGCCTAGTGAGTGAGTCAT+TGG | - | chr8_2:12925131-12925150 | Msa1235150:intron | 45.0% | |
AGCCTAGTGAGTGAGTCATT+GGG | - | chr8_2:12925132-12925151 | Msa1235150:intron | 45.0% | |
TTCCCAATGACTCACTCACT+AGG | + | chr8_2:12925137-12925156 | None:intergenic | 45.0% | |
GTTAGGAGTTCGTAGAACTC+TGG | - | chr8_2:12925214-12925233 | Msa1235150:intron | 45.0% | |
! | ATTGATGGTTGTTAGCTCGC+TGG | - | chr8_2:12925568-12925587 | Msa1235150:intron | 45.0% |
TGTTAGCTCGCTGGACATTA+CGG | - | chr8_2:12925577-12925596 | Msa1235150:intron | 45.0% | |
TGTGCTTCCTGGATTTGGAA+CGG | - | chr8_2:12925644-12925663 | Msa1235150:intron | 45.0% | |
!! | GAACCTTATTGATTCGGGAG+AGG | - | chr8_2:12925670-12925689 | Msa1235150:intron | 45.0% |
GATCCTCTCCCGAATCAATA+AGG | + | chr8_2:12925676-12925695 | None:intergenic | 45.0% | |
AGAAGTTTGGGGACTTAACC+CGG | - | chr8_2:12925786-12925805 | Msa1235150:intron | 45.0% | |
TATCTAGACGAGCATCTACC+CGG | + | chr8_2:12925808-12925827 | None:intergenic | 45.0% | |
AAGCTACCTTGGAGAGCTTA+TGG | - | chr8_2:12926124-12926143 | Msa1235150:intron | 45.0% | |
! | AAACATTCGTGACTGGTTGG+GGG | + | chr8_2:12926177-12926196 | None:intergenic | 45.0% |
! | AGCCAAGGTGTCTACAATCA+TGG | + | chr8_2:12926413-12926432 | None:intergenic | 45.0% |
ATTGGCATTGTGTTCCGGAT+CGG | - | chr8_2:12926505-12926524 | Msa1235150:intron | 45.0% | |
!! | ACTCCACATCGCTAGCTTTA+GGG | + | chr8_2:12926727-12926746 | None:intergenic | 45.0% |
TCCTCTCCACAAAACCTCGA+TGG | - | chr8_2:12921698-12921717 | Msa1235150:three_prime_UTR | 50.0% | |
!! | ACCATCGAGGTTTTGTGGAG+AGG | + | chr8_2:12921702-12921721 | None:intergenic | 50.0% |
CTCCACAAAACCTCGATGGT+TGG | - | chr8_2:12921702-12921721 | Msa1235150:three_prime_UTR | 50.0% | |
AGGGTCACCAGGAACAAACT+TGG | + | chr8_2:12921729-12921748 | None:intergenic | 50.0% | |
TCAAGAGGAATAGGGTCACC+AGG | + | chr8_2:12921740-12921759 | None:intergenic | 50.0% | |
! | CTGGAAACTGAAGCGTCAAG+AGG | + | chr8_2:12921755-12921774 | None:intergenic | 50.0% |
!! | TTGATGGCGATAGAGTCTGC+TGG | + | chr8_2:12921774-12921793 | None:intergenic | 50.0% |
CCATACTCCTTCTTGGGAGA+AGG | + | chr8_2:12921851-12921870 | None:intergenic | 50.0% | |
CCTTCTCCCAAGAAGGAGTA+TGG | - | chr8_2:12921848-12921867 | Msa1235150:CDS | 50.0% | |
! | TATAGGTGGCTTGCAGCAAC+TGG | - | chr8_2:12923567-12923586 | Msa1235150:intron | 50.0% |
CAACTGGACAATTCCGTCCT+AGG | - | chr8_2:12923583-12923602 | Msa1235150:intron | 50.0% | |
ATCTTACAGTGGAGGCAGCA+TGG | - | chr8_2:12924124-12924143 | Msa1235150:intron | 50.0% | |
ATCGTAAGTAACAGCCGCCT+TGG | + | chr8_2:12924340-12924359 | None:intergenic | 50.0% | |
GAGACTGAGGAGGAATACGA+AGG | - | chr8_2:12924387-12924406 | Msa1235150:CDS | 50.0% | |
! | CATGAGGTACCATAAGTCCG+TGG | + | chr8_2:12924428-12924447 | None:intergenic | 50.0% |
GTACCTCATGCAGCAGTATC+TGG | - | chr8_2:12924438-12924457 | Msa1235150:CDS | 50.0% | |
GTCTTAACCTCTGGTCCCTA+GGG | - | chr8_2:12924935-12924954 | Msa1235150:CDS | 50.0% | |
TCTTAACCTCTGGTCCCTAG+GGG | - | chr8_2:12924936-12924955 | Msa1235150:CDS | 50.0% | |
TAATACGGAATTCGGACGGG+AGG | - | chr8_2:12924972-12924991 | Msa1235150:CDS | 50.0% | |
TGTGATAGGACCCTGGGTTT+GGG | - | chr8_2:12925038-12925057 | Msa1235150:CDS | 50.0% | |
TGGATTAAGGCCCAAACCCA+GGG | + | chr8_2:12925051-12925070 | None:intergenic | 50.0% | |
TTGGATTAAGGCCCAAACCC+AGG | + | chr8_2:12925052-12925071 | None:intergenic | 50.0% | |
ACGAACTCCTAACCAGAGCT+AGG | + | chr8_2:12925207-12925226 | None:intergenic | 50.0% | |
! | GTTCCAAATCCAGGAAGCAC+AGG | + | chr8_2:12925645-12925664 | None:intergenic | 50.0% |
! | GTGCTTCCTGGATTTGGAAC+GGG | - | chr8_2:12925645-12925664 | Msa1235150:intron | 50.0% |
GTTCTTCCCGTTCCAAATCC+AGG | + | chr8_2:12925654-12925673 | None:intergenic | 50.0% | |
GAAGTTTGGGGACTTAACCC+GGG | - | chr8_2:12925787-12925806 | Msa1235150:intron | 50.0% | |
ATCTAGACGAGCATCTACCC+GGG | + | chr8_2:12925807-12925826 | None:intergenic | 50.0% | |
GATTAAGTTAAGCCGGGGTG+AGG | + | chr8_2:12925912-12925931 | None:intergenic | 50.0% | |
GCATGTCCATAAGCTCTCCA+AGG | + | chr8_2:12926133-12926152 | None:intergenic | 50.0% | |
! | GACTGGTTGGGGGAGTTTAT+GGG | + | chr8_2:12926167-12926186 | None:intergenic | 50.0% |
! | TGACTGGTTGGGGGAGTTTA+TGG | + | chr8_2:12926168-12926187 | None:intergenic | 50.0% |
CCAGCTGTGATAAACCGATC+CGG | + | chr8_2:12926522-12926541 | None:intergenic | 50.0% | |
TGACCCTAAAGCTAGCGATG+TGG | - | chr8_2:12926721-12926740 | Msa1235150:intron | 50.0% | |
!! | GACTCCACATCGCTAGCTTT+AGG | + | chr8_2:12926728-12926747 | None:intergenic | 50.0% |
AAAGCTAGCGATGTGGAGTC+TGG | - | chr8_2:12926728-12926747 | Msa1235150:intron | 50.0% | |
! | GCCCAACCATCGAGGTTTTG+TGG | + | chr8_2:12921707-12921726 | None:intergenic | 55.0% |
CAAACTTGGCCCAACCATCG+AGG | + | chr8_2:12921715-12921734 | None:intergenic | 55.0% | |
! | GGTTGGGCCAAGTTTGTTCC+TGG | - | chr8_2:12921719-12921738 | Msa1235150:three_prime_UTR | 55.0% |
TGGGAGAAGGAGCTGAGGAA+GGG | + | chr8_2:12921838-12921857 | None:intergenic | 55.0% | |
TTGGGAGAAGGAGCTGAGGA+AGG | + | chr8_2:12921839-12921858 | None:intergenic | 55.0% | |
CTTCTTGGGAGAAGGAGCTG+AGG | + | chr8_2:12921843-12921862 | None:intergenic | 55.0% | |
CTCAGCTCCTTCTCCCAAGA+AGG | - | chr8_2:12921841-12921860 | Msa1235150:CDS | 55.0% | |
TGGCTTAAATGGGGGGCAGT+AGG | - | chr8_2:12922572-12922591 | Msa1235150:intron | 55.0% | |
GGCTTAAATGGGGGGCAGTA+GGG | - | chr8_2:12922573-12922592 | Msa1235150:intron | 55.0% | |
GCTTAAATGGGGGGCAGTAG+GGG | - | chr8_2:12922574-12922593 | Msa1235150:intron | 55.0% | |
GGGGATTGCGATACCGCTTT+GGG | - | chr8_2:12924232-12924251 | Msa1235150:CDS | 55.0% | |
AACCCTGGCAGTAGAGACAG+CGG | + | chr8_2:12924312-12924331 | None:intergenic | 55.0% | |
ACTGCCAGGGTTATGTGCCA+AGG | - | chr8_2:12924320-12924339 | Msa1235150:CDS | 55.0% | |
CAGTCTCCGTGTTTCTCCAG+AGG | + | chr8_2:12924374-12924393 | None:intergenic | 55.0% | |
CTGGAGAAACACGGAGACTG+AGG | - | chr8_2:12924374-12924393 | Msa1235150:CDS | 55.0% | |
GAGAAACACGGAGACTGAGG+AGG | - | chr8_2:12924377-12924396 | Msa1235150:CDS | 55.0% | |
GGTCTTAACCTCTGGTCCCT+AGG | - | chr8_2:12924934-12924953 | Msa1235150:CDS | 55.0% | |
ACCAGATCCCCTTTCCCCTA+GGG | + | chr8_2:12924953-12924972 | None:intergenic | 55.0% | |
TACCAGATCCCCTTTCCCCT+AGG | + | chr8_2:12924954-12924973 | None:intergenic | 55.0% | |
CTGTGATAGGACCCTGGGTT+TGG | - | chr8_2:12925037-12925056 | Msa1235150:CDS | 55.0% | |
!! | CTAGGAGCCTAGCTCTGGTT+AGG | - | chr8_2:12925197-12925216 | Msa1235150:intron | 55.0% |
GCTCCTGTGCTTCCTGGATT+TGG | - | chr8_2:12925639-12925658 | Msa1235150:intron | 55.0% | |
! | CCGGATCGGTTTATCACAGC+TGG | - | chr8_2:12926519-12926538 | Msa1235150:intron | 55.0% |
GGGGGGTGGGGGTTATTGAA+TGG | - | chr8_2:12922552-12922571 | Msa1235150:intron | 60.0% | |
TGGCATCCCTTGTGGCTCGT+CGG | - | chr8_2:12924211-12924230 | Msa1235150:CDS | 60.0% | |
CAATCCCCGACGAGCCACAA+GGG | + | chr8_2:12924220-12924239 | None:intergenic | 60.0% | |
CGGGGATTGCGATACCGCTT+TGG | - | chr8_2:12924231-12924250 | Msa1235150:CDS | 60.0% | |
ACACCGCTGTCTCTACTGCC+AGG | - | chr8_2:12924306-12924325 | Msa1235150:CDS | 60.0% | |
CACCGCTGTCTCTACTGCCA+GGG | - | chr8_2:12924307-12924326 | Msa1235150:CDS | 60.0% | |
GCCAGGGTTATGTGCCAAGG+CGG | - | chr8_2:12924323-12924342 | Msa1235150:CDS | 60.0% | |
ACCTCTGGTCCCTAGGGGAA+AGG | - | chr8_2:12924941-12924960 | Msa1235150:CDS | 60.0% | |
CCTCTGGTCCCTAGGGGAAA+GGG | - | chr8_2:12924942-12924961 | Msa1235150:CDS | 60.0% | |
CTCTGGTCCCTAGGGGAAAG+GGG | - | chr8_2:12924943-12924962 | Msa1235150:CDS | 60.0% | |
TCCCTAGGGGAAAGGGGATC+TGG | - | chr8_2:12924949-12924968 | Msa1235150:CDS | 60.0% | |
CTGGTCTAGGAGCCTAGCTC+TGG | - | chr8_2:12925192-12925211 | Msa1235150:intron | 60.0% | |
CAGGTAGCTCCTGTGCTTCC+TGG | - | chr8_2:12925633-12925652 | Msa1235150:intron | 60.0% | |
AACAACCGTCAGCCTCACCC+CGG | - | chr8_2:12925897-12925916 | Msa1235150:intron | 60.0% | |
TTAAGCCGGGGTGAGGCTGA+CGG | + | chr8_2:12925905-12925924 | None:intergenic | 60.0% | |
GGCATCCCTTGTGGCTCGTC+GGG | - | chr8_2:12924212-12924231 | Msa1235150:CDS | 65.0% | |
GCATCCCTTGTGGCTCGTCG+GGG | - | chr8_2:12924213-12924232 | Msa1235150:CDS | 65.0% | |
GCAATCCCCGACGAGCCACA+AGG | + | chr8_2:12924221-12924240 | None:intergenic | 65.0% | |
GCCGCCTTGGCACATAACCC+TGG | + | chr8_2:12924327-12924346 | None:intergenic | 65.0% | |
CCCTTTCCCCTAGGGACCAG+AGG | + | chr8_2:12924945-12924964 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 12921545 | 12927105 | 12921545 | ID=Msa1235150;Name=Msa1235150 |
chr8_2 | mRNA | 12921545 | 12927105 | 12921545 | ID=Msa1235150-mRNA-1;Parent=Msa1235150;Name=Msa1235150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=102|1|1|1|1|1|5|285|465 |
chr8_2 | exon | 12921545 | 12922039 | 12921545 | ID=Msa1235150-mRNA-1:exon:5031;Parent=Msa1235150-mRNA-1 |
chr8_2 | exon | 12922707 | 12923014 | 12922707 | ID=Msa1235150-mRNA-1:exon:5030;Parent=Msa1235150-mRNA-1 |
chr8_2 | exon | 12924182 | 12924539 | 12924182 | ID=Msa1235150-mRNA-1:exon:5029;Parent=Msa1235150-mRNA-1 |
chr8_2 | exon | 12924829 | 12925078 | 12924829 | ID=Msa1235150-mRNA-1:exon:5028;Parent=Msa1235150-mRNA-1 |
chr8_2 | exon | 12926732 | 12927105 | 12926732 | ID=Msa1235150-mRNA-1:exon:5027;Parent=Msa1235150-mRNA-1 |
chr8_2 | five_prime_UTR | 12927004 | 12927105 | 12927004 | ID=Msa1235150-mRNA-1:five_prime_utr;Parent=Msa1235150-mRNA-1 |
chr8_2 | CDS | 12926732 | 12927003 | 12926732 | ID=Msa1235150-mRNA-1:cds;Parent=Msa1235150-mRNA-1 |
chr8_2 | CDS | 12924829 | 12925078 | 12924829 | ID=Msa1235150-mRNA-1:cds;Parent=Msa1235150-mRNA-1 |
chr8_2 | CDS | 12924182 | 12924539 | 12924182 | ID=Msa1235150-mRNA-1:cds;Parent=Msa1235150-mRNA-1 |
chr8_2 | CDS | 12922707 | 12923014 | 12922707 | ID=Msa1235150-mRNA-1:cds;Parent=Msa1235150-mRNA-1 |
chr8_2 | CDS | 12921830 | 12922039 | 12921830 | ID=Msa1235150-mRNA-1:cds;Parent=Msa1235150-mRNA-1 |
chr8_2 | three_prime_UTR | 12921545 | 12921829 | 12921545 | ID=Msa1235150-mRNA-1:three_prime_utr;Parent=Msa1235150-mRNA-1 |
Gene Sequence |
Protein sequence |