Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522660 | XP_013462091.1 | 95.787 | 356 | 13 | 1 | 1 | 356 | 1 | 354 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522660 | A0A072V374 | 95.787 | 356 | 13 | 1 | 1 | 356 | 1 | 354 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0522660 | 0.826583 | 2.504754e-54 | -8.615850e-47 |
| Msa0032120 | Msa0522660 | 0.838170 | 3.371073e-57 | -8.615850e-47 |
| Msa0032400 | Msa0522660 | 0.821589 | 3.726124e-53 | -8.615850e-47 |
| Msa0050580 | Msa0522660 | 0.829244 | 5.738070e-55 | -8.615850e-47 |
| Msa0056520 | Msa0522660 | 0.874222 | 7.991224e-68 | -8.615850e-47 |
| Msa0056690 | Msa0522660 | 0.874303 | 7.503856e-68 | -8.615850e-47 |
| Msa0166570 | Msa0522660 | 0.808814 | 2.574597e-50 | -8.615850e-47 |
| Msa0173820 | Msa0522660 | 0.803844 | 2.870740e-49 | -8.615850e-47 |
| Msa0173830 | Msa0522660 | 0.810229 | 1.279065e-50 | -8.615850e-47 |
| Msa0185700 | Msa0522660 | 0.839626 | 1.416123e-57 | -8.615850e-47 |
| Msa0378080 | Msa0522660 | 0.833820 | 4.281862e-56 | -8.615850e-47 |
| Msa0384430 | Msa0522660 | 0.942385 | 7.890955e-102 | -8.615850e-47 |
| Msa0384750 | Msa0522660 | 0.823539 | 1.311669e-53 | -8.615850e-47 |
| Msa0390060 | Msa0522660 | 0.869801 | 2.357273e-66 | -8.615850e-47 |
| Msa0392210 | Msa0522660 | 0.830726 | 2.496978e-55 | -8.615850e-47 |
| Msa0425940 | Msa0522660 | 0.802466 | 5.536743e-49 | -8.615850e-47 |
| Msa0426160 | Msa0522660 | 0.803996 | 2.670318e-49 | -8.615850e-47 |
| Msa0443500 | Msa0522660 | 0.809541 | 1.797939e-50 | -8.615850e-47 |
| Msa0468160 | Msa0522660 | 0.825148 | 5.489410e-54 | -8.615850e-47 |
| Msa0470180 | Msa0522660 | 0.840367 | 9.075988e-58 | -8.615850e-47 |
| Msa0323990 | Msa0522660 | 0.801316 | 9.535462e-49 | -8.615850e-47 |
| Msa0346980 | Msa0522660 | 0.807585 | 4.704478e-50 | -8.615850e-47 |
| Msa0349060 | Msa0522660 | 0.834460 | 2.959402e-56 | -8.615850e-47 |
| Msa0358170 | Msa0522660 | 0.829570 | 4.780596e-55 | -8.615850e-47 |
| Msa0487770 | Msa0522660 | 0.824751 | 6.811822e-54 | -8.615850e-47 |
| Msa0491020 | Msa0522660 | 0.822613 | 2.156478e-53 | -8.615850e-47 |
| Msa0518040 | Msa0522660 | 0.834765 | 2.480487e-56 | -8.615850e-47 |
| Msa0522660 | Msa0546840 | 0.845665 | 3.524811e-59 | -8.615850e-47 |
| Msa0522660 | Msa0571610 | 0.805292 | 1.431968e-49 | -8.615850e-47 |
| Msa0522660 | Msa0583740 | 0.867364 | 1.444813e-65 | -8.615850e-47 |
| Msa0522660 | Msa0621120 | 0.854467 | 1.207653e-61 | -8.615850e-47 |
| Msa0522660 | Msa0639370 | 0.851448 | 8.815685e-61 | -8.615850e-47 |
| Msa0522660 | Msa0661240 | 0.860062 | 2.683807e-63 | -8.615850e-47 |
| Msa0522660 | Msa0669220 | 0.805984 | 1.024950e-49 | -8.615850e-47 |
| Msa0522660 | Msa0677290 | 0.815483 | 9.034005e-52 | -8.615850e-47 |
| Msa0522660 | Msa0682460 | 0.806283 | 8.868233e-50 | -8.615850e-47 |
| Msa0522660 | Msa0688370 | 0.819452 | 1.153179e-52 | -8.615850e-47 |
| Msa0522660 | Msa0727170 | 0.831089 | 2.034187e-55 | -8.615850e-47 |
| Msa0522660 | Msa0728280 | 0.804162 | 2.465813e-49 | -8.615850e-47 |
| Msa0522660 | Msa0728380 | 0.804907 | 1.724347e-49 | -8.615850e-47 |
| Msa0522660 | Msa0728540 | 0.813028 | 3.149070e-51 | -8.615850e-47 |
| Msa0522660 | Msa0756470 | 0.803044 | 4.205760e-49 | -8.615850e-47 |
| Msa0522660 | Msa0767520 | 0.864845 | 9.066990e-65 | -8.615850e-47 |
| Msa0522660 | Msa0776480 | 0.803529 | 3.337176e-49 | -8.615850e-47 |
| Msa0522660 | Msa0835520 | 0.845887 | 3.068456e-59 | -8.615850e-47 |
| Msa0522660 | Msa0847100 | 0.846599 | 1.962954e-59 | -8.615850e-47 |
| Msa0522660 | Msa0880220 | 0.822060 | 2.898536e-53 | -8.615850e-47 |
| Msa0522660 | Msa0913090 | 0.804528 | 2.068653e-49 | -8.615850e-47 |
| Msa0522660 | Msa0950320 | 0.812058 | 5.131976e-51 | -8.615850e-47 |
| Msa0522660 | Msa1072340 | 0.831807 | 1.354239e-55 | -8.615850e-47 |
| Msa0522660 | Msa1111630 | 0.830161 | 3.431504e-55 | -8.615850e-47 |
| Msa0522660 | Msa1118150 | 0.828223 | 1.012907e-54 | -8.615850e-47 |
| Msa0522660 | Msa1159350 | 0.821114 | 4.796061e-53 | -8.615850e-47 |
| Msa0522660 | Msa1167170 | 0.824693 | 7.029539e-54 | -8.615850e-47 |
| Msa0522660 | Msa1177240 | 0.865596 | 5.265713e-65 | -8.615850e-47 |
| Msa0522660 | Msa1188940 | 0.856527 | 3.028434e-62 | -8.615850e-47 |
| Msa0522660 | Msa1235150 | 0.802686 | 4.986059e-49 | -8.615850e-47 |
| Msa0522660 | Msa1243170 | 0.832600 | 8.619879e-56 | -8.615850e-47 |
| Msa0522660 | Msa1284520 | 0.845650 | 3.557671e-59 | -8.615850e-47 |
| Msa0522660 | Msa1290200 | 0.805581 | 1.245531e-49 | -8.615850e-47 |
| Msa0522660 | Msa1306580 | 0.818016 | 2.442136e-52 | -8.615850e-47 |
| Msa0522660 | Msa1317030 | 0.882151 | 1.325019e-70 | -8.615850e-47 |
| Msa0522660 | Msa1324000 | 0.851769 | 7.151300e-61 | -8.615850e-47 |
| Msa0522660 | Msa1375340 | 0.827661 | 1.383167e-54 | -8.615850e-47 |
| Msa0522660 | Msa1382310 | 0.830317 | 3.142822e-55 | -8.615850e-47 |
| Msa0522660 | Msa1387200 | 0.810874 | 9.279267e-51 | -8.615850e-47 |
| Msa0522660 | Msa1388240 | 0.803393 | 3.561147e-49 | -8.615850e-47 |
| Msa0522660 | Msa1398480 | 0.842047 | 3.282560e-58 | -8.615850e-47 |
| Msa0522660 | Msa1447300 | 0.967506 | 2.264914e-127 | -8.615850e-47 |
| Msa0522660 | Msa1449880 | 0.842654 | 2.265670e-58 | -8.615850e-47 |
| Msa0522660 | Msa1453620 | 0.848574 | 5.621489e-60 | -8.615850e-47 |
| Msa0522660 | Msa1460440 | 0.980461 | 2.845184e-150 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522660 | MtrunA17_Chr3g0141281 | 95.787 | 356 | 13 | 1 | 1 | 356 | 1 | 354 | 0.0 | 687 |
| Msa0522660 | MtrunA17_Chr3g0117341 | 29.907 | 321 | 206 | 6 | 42 | 349 | 56 | 370 | 3.79e-46 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522660 | AT1G48460.1 | 60.584 | 274 | 104 | 1 | 83 | 356 | 71 | 340 | 6.14e-120 | 350 |
| Msa0522660 | AT1G48460.2 | 53.650 | 274 | 86 | 2 | 83 | 356 | 71 | 303 | 2.44e-98 | 294 |
| Msa0522660 | AT5G63040.2 | 29.762 | 336 | 222 | 5 | 13 | 346 | 35 | 358 | 1.16e-34 | 130 |
| Msa0522660 | AT5G63040.1 | 29.762 | 336 | 222 | 5 | 13 | 346 | 35 | 358 | 1.26e-34 | 130 |
Find 90 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGAGGCTATTCCCTTCT+AGG | 0.161760 | 3_4:+75952546 | Msa0522660:CDS |
| AGATATCAGAAACAGAATTT+TGG | 0.173325 | 3_4:+75949986 | Msa0522660:CDS |
| AGTTCTAGTGTTCCTGTTAA+TGG | 0.210562 | 3_4:+75950230 | Msa0522660:CDS |
| GAGCTCTTACTTATGGGTTT+TGG | 0.226459 | 3_4:+75950370 | Msa0522660:CDS |
| AGACAAACCTCAAATATAAT+AGG | 0.229602 | 3_4:-75952215 | None:intergenic |
| GCTTCTGATTCCAATGTAAA+TGG | 0.239192 | 3_4:+75950182 | Msa0522660:CDS |
| AGCAGCACAGCCAACTAAAA+AGG | 0.270995 | 3_4:-75952135 | None:intergenic |
| TTAGAGCTGTACTGTAAATA+TGG | 0.272745 | 3_4:-75951972 | None:intergenic |
| CATCAACTTCTCGGCAAAAT+TGG | 0.283065 | 3_4:-75952402 | None:intergenic |
| AAGAGGAGAGCTCTTACTTA+TGG | 0.285229 | 3_4:+75950363 | Msa0522660:CDS |
| TTCCATCGTCACATCAGTTT+AGG | 0.286689 | 3_4:-75949779 | None:intergenic |
| GTTCTAGTGTTCCTGTTAAT+GGG | 0.303684 | 3_4:+75950231 | Msa0522660:CDS |
| GAACCATTTCATGGTAAATC+AGG | 0.312758 | 3_4:+75950269 | Msa0522660:CDS |
| GCACACCGTGGTAAGTTGTT+AGG | 0.312996 | 3_4:+75952795 | Msa0522660:three_prime_UTR |
| TCCATCGTCACATCAGTTTA+GGG | 0.322289 | 3_4:-75949778 | None:intergenic |
| CTACATTTGTTGTGAGTAAA+GGG | 0.340887 | 3_4:+75949721 | Msa0522660:five_prime_UTR |
| GAACGAAGTGGAGCTTTGTT+TGG | 0.345152 | 3_4:+75952464 | Msa0522660:CDS |
| TGCATACAATACCCAGTAAC+TGG | 0.357271 | 3_4:-75952502 | None:intergenic |
| TTTATTACTGACACGATGTT+TGG | 0.357578 | 3_4:-75949848 | None:intergenic |
| GGTGTGCGAATCAATTATTT+TGG | 0.360901 | 3_4:-75952779 | None:intergenic |
| CCACTTCGTTCTAGTACTTC+AGG | 0.361982 | 3_4:-75952452 | None:intergenic |
| TCTAGTCCCTATTATATTTG+AGG | 0.362027 | 3_4:+75952208 | Msa0522660:CDS |
| ATTTGCATTTGAGAGACATT+TGG | 0.369154 | 3_4:+75952160 | Msa0522660:CDS |
| AATGGGTTGGAACCATTTCA+TGG | 0.370157 | 3_4:+75950260 | Msa0522660:CDS |
| TACTGGGTATTGTATGCATT+TGG | 0.376974 | 3_4:+75952507 | Msa0522660:CDS |
| CTTTCGCAGTCACAAGCAAC+TGG | 0.380671 | 3_4:+75949947 | Msa0522660:intron |
| TTCCAATGTAAATGGTTCAT+TGG | 0.384931 | 3_4:+75950190 | Msa0522660:CDS |
| TGGAGCTTTGTTTGGAATGA+TGG | 0.401307 | 3_4:+75952472 | Msa0522660:CDS |
| CACACCGTGGTAAGTTGTTA+GGG | 0.409549 | 3_4:+75952796 | Msa0522660:three_prime_UTR |
| GAACCTGATTTACCATGAAA+TGG | 0.410530 | 3_4:-75950272 | None:intergenic |
| ACTACATTTGTTGTGAGTAA+AGG | 0.411169 | 3_4:+75949720 | Msa0522660:five_prime_UTR |
| ACCTCTGCTTTCCTCACAAC+GGG | 0.412478 | 3_4:+75952032 | Msa0522660:CDS |
| AGAGGAGAGCTCTTACTTAT+GGG | 0.413551 | 3_4:+75950364 | Msa0522660:CDS |
| AAAGATGATATGAATGCAAC+AGG | 0.422615 | 3_4:-75950395 | None:intergenic |
| CGGAGCGGATGACATTTATA+AGG | 0.427184 | 3_4:+75952626 | Msa0522660:three_prime_UTR |
| GACAAACCTCAAATATAATA+GGG | 0.437022 | 3_4:-75952214 | None:intergenic |
| GAGAAGTGAAGTGGTTGAGA+GGG | 0.440340 | 3_4:-75949826 | None:intergenic |
| TACAGTACAGCTCTAAAAGA+TGG | 0.450227 | 3_4:+75951979 | Msa0522660:CDS |
| CATAGAGTACATCAACTTCT+CGG | 0.455751 | 3_4:-75952411 | None:intergenic |
| AAAAGATGGGGTCTCATCAC+TGG | 0.458268 | 3_4:+75951993 | Msa0522660:CDS |
| ACTTCCCTTCTTCTACAGAT+TGG | 0.459140 | 3_4:-75950319 | None:intergenic |
| AAGGCGATTAACTTCAATGT+AGG | 0.460653 | 3_4:+75952645 | Msa0522660:three_prime_UTR |
| TTTGATTTCAGCATTCAAAC+AGG | 0.466305 | 3_4:+75950097 | Msa0522660:intron |
| TTCCAATGAACCATTTACAT+TGG | 0.468010 | 3_4:-75950192 | None:intergenic |
| GAAGTTGATGTACTCTATGA+AGG | 0.469649 | 3_4:+75952415 | Msa0522660:CDS |
| CAGAGGTTATATATCCTTTG+AGG | 0.492149 | 3_4:-75952016 | None:intergenic |
| GGAGAAGTGAAGTGGTTGAG+AGG | 0.505328 | 3_4:-75949827 | None:intergenic |
| CATTGATGACGTTTCTCTTG+AGG | 0.505870 | 3_4:+75952531 | Msa0522660:CDS |
| ACAGTACAGCTCTAAAAGAT+GGG | 0.516922 | 3_4:+75951980 | Msa0522660:CDS |
| GTCGGTGGTTCGCATGGCAG+CGG | 0.518805 | 3_4:+75952097 | Msa0522660:CDS |
| ACAGACGTGGGTCATCGTGC+TGG | 0.519318 | 3_4:+75952183 | Msa0522660:CDS |
| ATTCTGCCACAGTTCTTCGT+TGG | 0.519550 | 3_4:+75950419 | Msa0522660:CDS |
| ATCTGTAGAAGAAGGGAAGT+TGG | 0.519792 | 3_4:+75950322 | Msa0522660:CDS |
| TCAGTTTAGGGTTCAAGAAG+TGG | 0.524196 | 3_4:-75949766 | None:intergenic |
| CTTCGTTGGCACTGTTGTTG+CGG | 0.536995 | 3_4:+75950433 | Msa0522660:CDS |
| ACACACCAATCTGTAGAAGA+AGG | 0.538353 | 3_4:+75950314 | Msa0522660:CDS |
| TTCTAGTGTTCCTGTTAATG+GGG | 0.540217 | 3_4:+75950232 | Msa0522660:CDS |
| GGTCTCATCACTGGCCTCAA+AGG | 0.549169 | 3_4:+75952002 | Msa0522660:CDS |
| GAGCTCTCCTCTTGTTTGAA+CGG | 0.557951 | 3_4:-75950353 | None:intergenic |
| GTCACATACAAAAGAAGAAG+AGG | 0.559688 | 3_4:-75952071 | None:intergenic |
| GACCTGGTCGGTGGTTCGCA+TGG | 0.562381 | 3_4:+75952091 | Msa0522660:CDS |
| TGCCATGCGAACCACCGACC+AGG | 0.563381 | 3_4:-75952093 | None:intergenic |
| TGTACTGTAAATATGGCCTC+TGG | 0.563744 | 3_4:-75951965 | None:intergenic |
| GGAAGAGTGTTGTACATAGT+CGG | 0.575600 | 3_4:+75952606 | Msa0522660:three_prime_UTR |
| AAGTTGATGTACTCTATGAA+GGG | 0.577690 | 3_4:+75952416 | Msa0522660:CDS |
| TCCGAGGCACTGTTCTATGT+CGG | 0.580851 | 3_4:+75951909 | Msa0522660:CDS |
| ATCTGCTCCGTTCAAACAAG+AGG | 0.588809 | 3_4:+75950346 | Msa0522660:CDS |
| GAGAGACATTTGGACAGACG+TGG | 0.588933 | 3_4:+75952170 | Msa0522660:CDS |
| TTTCTGCTACTGGCCTAGAA+GGG | 0.597512 | 3_4:-75952559 | None:intergenic |
| TCAAATATAATAGGGACTAG+AGG | 0.608339 | 3_4:-75952206 | None:intergenic |
| CACACCAATCTGTAGAAGAA+GGG | 0.610794 | 3_4:+75950315 | Msa0522660:CDS |
| TGTGACTTCATTCTCTTCCG+AGG | 0.611821 | 3_4:+75951893 | Msa0522660:CDS |
| AACCTCTGCTTTCCTCACAA+CGG | 0.613720 | 3_4:+75952031 | Msa0522660:CDS |
| TCTAGTGTTCCTGTTAATGG+GGG | 0.617974 | 3_4:+75950233 | Msa0522660:CDS |
| AGTTGATGTACTCTATGAAG+GGG | 0.619565 | 3_4:+75952417 | Msa0522660:CDS |
| TCCGACATAGAACAGTGCCT+CGG | 0.628444 | 3_4:-75951910 | None:intergenic |
| AGGTGGCTGATCGTGTCCAG+AGG | 0.630587 | 3_4:+75951949 | Msa0522660:CDS |
| TCTAGTACTTCAGGTGACGC+AGG | 0.632274 | 3_4:-75952443 | None:intergenic |
| TTTGTATGTGACCTGGTCGG+TGG | 0.632802 | 3_4:+75952082 | Msa0522660:CDS |
| CGATGTTTGGAGAAGTGAAG+TGG | 0.648063 | 3_4:-75949835 | None:intergenic |
| CCTGAAGTACTAGAACGAAG+TGG | 0.656210 | 3_4:+75952452 | Msa0522660:CDS |
| CAGTACAGCTCTAAAAGATG+GGG | 0.663248 | 3_4:+75951981 | Msa0522660:CDS |
| AGAGACATTTGGACAGACGT+GGG | 0.672518 | 3_4:+75952171 | Msa0522660:CDS |
| ATACAAAAGAAGAAGAGGAA+CGG | 0.679901 | 3_4:-75952066 | None:intergenic |
| TGAACCCTAACAACTTACCA+CGG | 0.681279 | 3_4:-75952800 | None:intergenic |
| ACCCTAAACTGATGTGACGA+TGG | 0.681521 | 3_4:+75949777 | Msa0522660:exon |
| ACCCGTTGTGAGGAAAGCAG+AGG | 0.694025 | 3_4:-75952033 | None:intergenic |
| ACAGTGCCAACGAAGAACTG+TGG | 0.710210 | 3_4:-75950425 | None:intergenic |
| AGTGTTGTACATAGTCGGAG+CGG | 0.712892 | 3_4:+75952611 | Msa0522660:three_prime_UTR |
| AATAATTGATTCGCACACCG+TGG | 0.717711 | 3_4:+75952783 | Msa0522660:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATGATTTGATTTTAAA+AGG | + | chr3_4:75950461-75950480 | Msa0522660:CDS | 10.0% |
| !!! | ATTTATAACAATTTGTTGAA+TGG | - | chr3_4:75950070-75950089 | None:intergenic | 15.0% |
| !!! | GAAATTATTTTGTTTACTTA+AGG | - | chr3_4:75951397-75951416 | None:intergenic | 15.0% |
| !!! | AAATGTACGATTTTTGTTTT+TGG | + | chr3_4:75950025-75950044 | Msa0522660:intron | 20.0% |
| !!! | AATGTACGATTTTTGTTTTT+GGG | + | chr3_4:75950026-75950045 | Msa0522660:intron | 20.0% |
| !!! | ATTAAAGAACCTTCATTTTT+GGG | + | chr3_4:75950122-75950141 | Msa0522660:CDS | 20.0% |
| !! | CTTTGATAAAACTTAATGAA+AGG | - | chr3_4:75950788-75950807 | None:intergenic | 20.0% |
| !!! | CAGAATTTTATTTTACTTGT+CGG | - | chr3_4:75951111-75951130 | None:intergenic | 20.0% |
| !!! | ATGATAATTGTTTTTGTTGT+AGG | + | chr3_4:75951149-75951168 | Msa0522660:intron | 20.0% |
| !! | GTTAATACCAAATTAGTTAT+TGG | + | chr3_4:75951295-75951314 | Msa0522660:intron | 20.0% |
| !! | TATAAAGCCAATAACTAATT+TGG | - | chr3_4:75951305-75951324 | None:intergenic | 20.0% |
| !!! | AAAGACATTGTTTATTTTCT+CGG | - | chr3_4:75952737-75952756 | None:intergenic | 20.0% |
| ! | AAGAAGAAAAAAAGTTAGTG+TGG | - | chr3_4:75949927-75949946 | None:intergenic | 25.0% |
| !! | AGATATCAGAAACAGAATTT+TGG | + | chr3_4:75949986-75950005 | Msa0522660:CDS | 25.0% |
| !! | GATATCAGAAACAGAATTTT+GGG | + | chr3_4:75949987-75950006 | Msa0522660:CDS | 25.0% |
| !! | GATTAAAGAACCTTCATTTT+TGG | + | chr3_4:75950121-75950140 | Msa0522660:CDS | 25.0% |
| !!! | TTTTTCAATCCCAAAAATGA+AGG | - | chr3_4:75950134-75950153 | None:intergenic | 25.0% |
| ! | TGGGATTGAAAAAATTTCAA+AGG | + | chr3_4:75950141-75950160 | Msa0522660:CDS | 25.0% |
| ! | GTTAATGCCAAATTATTTAG+TGG | + | chr3_4:75950709-75950728 | Msa0522660:intron | 25.0% |
| ! | CCATTCATAATTACAAAACA+TGG | - | chr3_4:75950925-75950944 | None:intergenic | 25.0% |
| !! | CCATGTTTTGTAATTATGAA+TGG | + | chr3_4:75950922-75950941 | Msa0522660:intron | 25.0% |
| !! | TATTTTACTTGTCGGAAATT+CGG | - | chr3_4:75951103-75951122 | None:intergenic | 25.0% |
| !!! | ATATTCTGGTTGTTATTTCA+CGG | - | chr3_4:75951183-75951202 | None:intergenic | 25.0% |
| ! | ATCAGCAATATAAACACATT+AGG | - | chr3_4:75951218-75951237 | None:intergenic | 25.0% |
| ! | TATATGGTAGTATGTTGTTA+AGG | + | chr3_4:75951259-75951278 | Msa0522660:intron | 25.0% |
| !!! | ACTATTTGTTGTTATCTTTG+TGG | + | chr3_4:75951477-75951496 | Msa0522660:intron | 25.0% |
| ! | CCATTCATAATTTCAAAACA+TGG | - | chr3_4:75951511-75951530 | None:intergenic | 25.0% |
| !!! | CCATGTTTTGAAATTATGAA+TGG | + | chr3_4:75951508-75951527 | Msa0522660:intron | 25.0% |
| !! | TTTATGTAACTCCATTCTTT+TGG | - | chr3_4:75951783-75951802 | None:intergenic | 25.0% |
| ! | AAAAGAATGGAGTTACATAA+AGG | + | chr3_4:75951782-75951801 | Msa0522660:intron | 25.0% |
| !! | TCACAATATCTGCATTTTAT+TGG | - | chr3_4:75951878-75951897 | None:intergenic | 25.0% |
| ! | GACAAACCTCAAATATAATA+GGG | - | chr3_4:75952217-75952236 | None:intergenic | 25.0% |
| ! | AGACAAACCTCAAATATAAT+AGG | - | chr3_4:75952218-75952237 | None:intergenic | 25.0% |
| !!! | GAAAATTACTGAGTTTTGTA+TGG | + | chr3_4:75952578-75952597 | Msa0522660:exon | 25.0% |
| !! | ACTACATTTGTTGTGAGTAA+AGG | + | chr3_4:75949720-75949739 | Msa0522660:five_prime_UTR | 30.0% |
| !! | CTACATTTGTTGTGAGTAAA+GGG | + | chr3_4:75949721-75949740 | Msa0522660:five_prime_UTR | 30.0% |
| TTTATTACTGACACGATGTT+TGG | - | chr3_4:75949851-75949870 | None:intergenic | 30.0% | |
| ! | TTTGATTTCAGCATTCAAAC+AGG | + | chr3_4:75950097-75950116 | Msa0522660:intron | 30.0% |
| TTCCAATGTAAATGGTTCAT+TGG | + | chr3_4:75950190-75950209 | Msa0522660:CDS | 30.0% | |
| TTCCAATGAACCATTTACAT+TGG | - | chr3_4:75950195-75950214 | None:intergenic | 30.0% | |
| AAAGATGATATGAATGCAAC+AGG | - | chr3_4:75950398-75950417 | None:intergenic | 30.0% | |
| ! | AATTTAAAGCACAGAACAGA+AGG | - | chr3_4:75950535-75950554 | None:intergenic | 30.0% |
| ! | TTCTGTTCTGTGCTTTAAAT+TGG | + | chr3_4:75950534-75950553 | Msa0522660:intron | 30.0% |
| CATCAAGCCACTAAATAATT+TGG | - | chr3_4:75950719-75950738 | None:intergenic | 30.0% | |
| TGAAAGGATCAATTATCAAC+AGG | - | chr3_4:75950772-75950791 | None:intergenic | 30.0% | |
| !! | TTAAGTTTTATCAAAGCCTC+CGG | + | chr3_4:75950792-75950811 | Msa0522660:intron | 30.0% |
| AAAGAAATGACTTTGTATGC+CGG | - | chr3_4:75950814-75950833 | None:intergenic | 30.0% | |
| AAGAGTTATACAACAAACAG+AGG | - | chr3_4:75951021-75951040 | None:intergenic | 30.0% | |
| !! | TCTGTTTGTTGTATAACTCT+TGG | + | chr3_4:75951020-75951039 | Msa0522660:intron | 30.0% |
| !! | CTGTTTGTTGTATAACTCTT+GGG | + | chr3_4:75951021-75951040 | Msa0522660:intron | 30.0% |
| AGTTCTTTGTCTACACTATA+TGG | + | chr3_4:75951243-75951262 | Msa0522660:intron | 30.0% | |
| TCAATTACCAATAGTCTTTG+AGG | - | chr3_4:75951350-75951369 | None:intergenic | 30.0% | |
| ! | CAAAGACTATTGGTAATTGA+TGG | + | chr3_4:75951350-75951369 | Msa0522660:intron | 30.0% |
| ATAACAACAAATAGTGTCAG+TGG | - | chr3_4:75951472-75951491 | None:intergenic | 30.0% | |
| AGAAATGCAGAGAAATTCAA+GGG | - | chr3_4:75951552-75951571 | None:intergenic | 30.0% | |
| TAGAAATGCAGAGAAATTCA+AGG | - | chr3_4:75951553-75951572 | None:intergenic | 30.0% | |
| TGAGTTCTCACTAACATATA+TGG | + | chr3_4:75951631-75951650 | Msa0522660:intron | 30.0% | |
| ! | TGTATACCTTTTAGCGATTT+TGG | + | chr3_4:75951677-75951696 | Msa0522660:intron | 30.0% |
| ! | ATTTTGCCAAAATCGCTAAA+AGG | - | chr3_4:75951686-75951705 | None:intergenic | 30.0% |
| GAAATTCTGTTCCAAAAGAA+TGG | + | chr3_4:75951769-75951788 | Msa0522660:intron | 30.0% | |
| ! | TTTGTTTGTGCTGTTAAATG+TGG | + | chr3_4:75951812-75951831 | Msa0522660:intron | 30.0% |
| TTAGAGCTGTACTGTAAATA+TGG | - | chr3_4:75951975-75951994 | None:intergenic | 30.0% | |
| ATACAAAAGAAGAAGAGGAA+CGG | - | chr3_4:75952069-75952088 | None:intergenic | 30.0% | |
| ATTTGCATTTGAGAGACATT+TGG | + | chr3_4:75952160-75952179 | Msa0522660:CDS | 30.0% | |
| TCAAATATAATAGGGACTAG+AGG | - | chr3_4:75952209-75952228 | None:intergenic | 30.0% | |
| TCTAGTCCCTATTATATTTG+AGG | + | chr3_4:75952208-75952227 | Msa0522660:CDS | 30.0% | |
| !! | AAGTTGATGTACTCTATGAA+GGG | + | chr3_4:75952416-75952435 | Msa0522660:CDS | 30.0% |
| !! | TACTGAGTTTTGTATGGAAT+TGG | + | chr3_4:75952584-75952603 | Msa0522660:exon | 30.0% |
| !! | ACTGAGTTTTGTATGGAATT+GGG | + | chr3_4:75952585-75952604 | Msa0522660:exon | 30.0% |
| !!! | TATTTTGGCTGTAAACAAAC+AGG | - | chr3_4:75952767-75952786 | None:intergenic | 30.0% |
| ! | TGTTGTGAGTAAAGGGTTTT+AGG | + | chr3_4:75949728-75949747 | Msa0522660:five_prime_UTR | 35.0% |
| GCTTCTGATTCCAATGTAAA+TGG | + | chr3_4:75950182-75950201 | Msa0522660:CDS | 35.0% | |
| ! | AGTTCTAGTGTTCCTGTTAA+TGG | + | chr3_4:75950230-75950249 | Msa0522660:CDS | 35.0% |
| GTTCTAGTGTTCCTGTTAAT+GGG | + | chr3_4:75950231-75950250 | Msa0522660:CDS | 35.0% | |
| TTCTAGTGTTCCTGTTAATG+GGG | + | chr3_4:75950232-75950251 | Msa0522660:CDS | 35.0% | |
| CTGTTAATGGGGGTTATAAT+GGG | + | chr3_4:75950243-75950262 | Msa0522660:CDS | 35.0% | |
| GAACCATTTCATGGTAAATC+AGG | + | chr3_4:75950269-75950288 | Msa0522660:CDS | 35.0% | |
| GAACCTGATTTACCATGAAA+TGG | - | chr3_4:75950275-75950294 | None:intergenic | 35.0% | |
| ! | TCAGGTTCTGTCTCTTTTTA+TGG | + | chr3_4:75950287-75950306 | Msa0522660:CDS | 35.0% |
| ! | CAGGTTCTGTCTCTTTTTAT+GGG | + | chr3_4:75950288-75950307 | Msa0522660:CDS | 35.0% |
| ! | GTTCTGTGCTTTAAATTGGA+TGG | + | chr3_4:75950538-75950557 | Msa0522660:intron | 35.0% |
| ! | TGCTCTTTTTGTCTACACTT+CGG | + | chr3_4:75950652-75950671 | Msa0522660:intron | 35.0% |
| TCAATTATCAACAGGCTTTG+AGG | - | chr3_4:75950764-75950783 | None:intergenic | 35.0% | |
| AAGCTAACAACAACTAGTGT+TGG | - | chr3_4:75950889-75950908 | None:intergenic | 35.0% | |
| !! | ACTAGTTGTTGTTAGCTTTG+TGG | + | chr3_4:75950891-75950910 | Msa0522660:intron | 35.0% |
| TCTCACTCAGATAACATACA+TGG | + | chr3_4:75950979-75950998 | Msa0522660:intron | 35.0% | |
| TGTATAACTCTTGGGTATCT+TGG | + | chr3_4:75951029-75951048 | Msa0522660:intron | 35.0% | |
| GGAACAGCAATCATATATTC+TGG | - | chr3_4:75951197-75951216 | None:intergenic | 35.0% | |
| GAAATGCAGAGAAATTCAAG+GGG | - | chr3_4:75951551-75951570 | None:intergenic | 35.0% | |
| GTTCTCACTAACATATATGG+AGG | + | chr3_4:75951634-75951653 | Msa0522660:intron | 35.0% | |
| GTGTTTCCACGTTATTCTAT+CGG | + | chr3_4:75951709-75951728 | Msa0522660:intron | 35.0% | |
| ACAAATCCGATAGAATAACG+TGG | - | chr3_4:75951718-75951737 | None:intergenic | 35.0% | |
| ATGGAGTTACATAAAGGTCA+TGG | + | chr3_4:75951788-75951807 | Msa0522660:intron | 35.0% | |
| !! | TACAGTACAGCTCTAAAAGA+TGG | + | chr3_4:75951979-75951998 | Msa0522660:CDS | 35.0% |
| !! | ACAGTACAGCTCTAAAAGAT+GGG | + | chr3_4:75951980-75951999 | Msa0522660:CDS | 35.0% |
| CAGAGGTTATATATCCTTTG+AGG | - | chr3_4:75952019-75952038 | None:intergenic | 35.0% | |
| GTCACATACAAAAGAAGAAG+AGG | - | chr3_4:75952074-75952093 | None:intergenic | 35.0% | |
| ! | TTCTTCTTTTGTATGTGACC+TGG | + | chr3_4:75952075-75952094 | Msa0522660:CDS | 35.0% |
| TGAGAGGAATAACAACAACT+TGG | + | chr3_4:75952296-75952315 | Msa0522660:intron | 35.0% | |
| !! | TGAAATTGAATTGACTTGCC+AGG | + | chr3_4:75952349-75952368 | Msa0522660:intron | 35.0% |
| CATAGAGTACATCAACTTCT+CGG | - | chr3_4:75952414-75952433 | None:intergenic | 35.0% | |
| !! | GAAGTTGATGTACTCTATGA+AGG | + | chr3_4:75952415-75952434 | Msa0522660:CDS | 35.0% |
| ! | AGTTGATGTACTCTATGAAG+GGG | + | chr3_4:75952417-75952436 | Msa0522660:CDS | 35.0% |
| ! | ATGGTGATTTTCCAGTTACT+GGG | + | chr3_4:75952491-75952510 | Msa0522660:CDS | 35.0% |
| ! | TACTGGGTATTGTATGCATT+TGG | + | chr3_4:75952507-75952526 | Msa0522660:CDS | 35.0% |
| ! | ACTCAGTAATTTTCTGCTAC+TGG | - | chr3_4:75952572-75952591 | None:intergenic | 35.0% |
| AAGGCGATTAACTTCAATGT+AGG | + | chr3_4:75952645-75952664 | Msa0522660:three_prime_UTR | 35.0% | |
| ! | GGTGTGCGAATCAATTATTT+TGG | - | chr3_4:75952782-75952801 | None:intergenic | 35.0% |
| ! | TCAGTTTAGGGTTCAAGAAG+TGG | - | chr3_4:75949769-75949788 | None:intergenic | 40.0% |
| TCCATCGTCACATCAGTTTA+GGG | - | chr3_4:75949781-75949800 | None:intergenic | 40.0% | |
| TTCCATCGTCACATCAGTTT+AGG | - | chr3_4:75949782-75949801 | None:intergenic | 40.0% | |
| TCTAGTGTTCCTGTTAATGG+GGG | + | chr3_4:75950233-75950252 | Msa0522660:CDS | 40.0% | |
| CCATTATAACCCCCATTAAC+AGG | - | chr3_4:75950245-75950264 | None:intergenic | 40.0% | |
| CCTGTTAATGGGGGTTATAA+TGG | + | chr3_4:75950242-75950261 | Msa0522660:CDS | 40.0% | |
| !! | TAATGGGGGTTATAATGGGT+TGG | + | chr3_4:75950247-75950266 | Msa0522660:CDS | 40.0% |
| !! | AATGGGTTGGAACCATTTCA+TGG | + | chr3_4:75950260-75950279 | Msa0522660:CDS | 40.0% |
| ACACACCAATCTGTAGAAGA+AGG | + | chr3_4:75950314-75950333 | Msa0522660:CDS | 40.0% | |
| CACACCAATCTGTAGAAGAA+GGG | + | chr3_4:75950315-75950334 | Msa0522660:CDS | 40.0% | |
| ACTTCCCTTCTTCTACAGAT+TGG | - | chr3_4:75950322-75950341 | None:intergenic | 40.0% | |
| ATCTGTAGAAGAAGGGAAGT+TGG | + | chr3_4:75950322-75950341 | Msa0522660:CDS | 40.0% | |
| AAGAGGAGAGCTCTTACTTA+TGG | + | chr3_4:75950363-75950382 | Msa0522660:CDS | 40.0% | |
| AGAGGAGAGCTCTTACTTAT+GGG | + | chr3_4:75950364-75950383 | Msa0522660:CDS | 40.0% | |
| ! | GAGCTCTTACTTATGGGTTT+TGG | + | chr3_4:75950370-75950389 | Msa0522660:CDS | 40.0% |
| AGTGTAGACAAAAAGAGCAG+CGG | - | chr3_4:75950651-75950670 | None:intergenic | 40.0% | |
| ! | CTTTTTGTCTACACTTCGGT+AGG | + | chr3_4:75950656-75950675 | Msa0522660:intron | 40.0% |
| ! | CTAACAACAACTAGTGTTGG+TGG | - | chr3_4:75950886-75950905 | None:intergenic | 40.0% |
| GGCAAAACTTTGTGTTTCCA+TGG | + | chr3_4:75951050-75951069 | Msa0522660:intron | 40.0% | |
| TGTTTCCATGGTGTTCTGTT+GGG | + | chr3_4:75951062-75951081 | Msa0522660:intron | 40.0% | |
| ATGCGAACCTCAAAGACTAT+TGG | + | chr3_4:75951340-75951359 | Msa0522660:intron | 40.0% | |
| !! | TCTGCATTTCTAGTGCTTCT+TGG | + | chr3_4:75951561-75951580 | Msa0522660:intron | 40.0% |
| !! | CTGCATTTCTAGTGCTTCTT+GGG | + | chr3_4:75951562-75951581 | Msa0522660:intron | 40.0% |
| !! | TGCATTTCTAGTGCTTCTTG+GGG | + | chr3_4:75951563-75951582 | Msa0522660:intron | 40.0% |
| !! | GTTTTAGATGTAGACTCTCG+TGG | + | chr3_4:75951585-75951604 | Msa0522660:intron | 40.0% |
| ! | CGCTAAAAGGTATACAGCAA+AGG | - | chr3_4:75951673-75951692 | None:intergenic | 40.0% |
| ! | ACTTGCAACATTTTTGCAGG+TGG | + | chr3_4:75951932-75951951 | Msa0522660:CDS | 40.0% |
| TGTACTGTAAATATGGCCTC+TGG | - | chr3_4:75951968-75951987 | None:intergenic | 40.0% | |
| !! | CAGTACAGCTCTAAAAGATG+GGG | + | chr3_4:75951981-75952000 | Msa0522660:CDS | 40.0% |
| ! | CAATTTTCAAACCCGTTGTG+AGG | - | chr3_4:75952046-75952065 | None:intergenic | 40.0% |
| ! | TCTTTTGTATGTGACCTGGT+CGG | + | chr3_4:75952079-75952098 | Msa0522660:CDS | 40.0% |
| !! | GCTATAGCTCCCTTTTTAGT+TGG | + | chr3_4:75952125-75952144 | Msa0522660:CDS | 40.0% |
| GCTGATACAATCTGTATACC+TGG | - | chr3_4:75952370-75952389 | None:intergenic | 40.0% | |
| CATCAACTTCTCGGCAAAAT+TGG | - | chr3_4:75952405-75952424 | None:intergenic | 40.0% | |
| !! | TGGAGCTTTGTTTGGAATGA+TGG | + | chr3_4:75952472-75952491 | Msa0522660:CDS | 40.0% |
| ! | GATGGTGATTTTCCAGTTAC+TGG | + | chr3_4:75952490-75952509 | Msa0522660:CDS | 40.0% |
| TGCATACAATACCCAGTAAC+TGG | - | chr3_4:75952505-75952524 | None:intergenic | 40.0% | |
| !! | CATTGATGACGTTTCTCTTG+AGG | + | chr3_4:75952531-75952550 | Msa0522660:CDS | 40.0% |
| !! | GGAAGAGTGTTGTACATAGT+CGG | + | chr3_4:75952606-75952625 | Msa0522660:three_prime_UTR | 40.0% |
| !! | AATAATTGATTCGCACACCG+TGG | + | chr3_4:75952783-75952802 | Msa0522660:three_prime_UTR | 40.0% |
| TGAACCCTAACAACTTACCA+CGG | - | chr3_4:75952803-75952822 | None:intergenic | 40.0% | |
| ACCCTAAACTGATGTGACGA+TGG | + | chr3_4:75949777-75949796 | Msa0522660:exon | 45.0% | |
| GAGAAGTGAAGTGGTTGAGA+GGG | - | chr3_4:75949829-75949848 | None:intergenic | 45.0% | |
| CGATGTTTGGAGAAGTGAAG+TGG | - | chr3_4:75949838-75949857 | None:intergenic | 45.0% | |
| ATCTGCTCCGTTCAAACAAG+AGG | + | chr3_4:75950346-75950365 | Msa0522660:CDS | 45.0% | |
| ! | GAGCTCTCCTCTTGTTTGAA+CGG | - | chr3_4:75950356-75950375 | None:intergenic | 45.0% |
| ATTCTGCCACAGTTCTTCGT+TGG | + | chr3_4:75950419-75950438 | Msa0522660:CDS | 45.0% | |
| GAAATGACTTTGTATGCCGG+AGG | - | chr3_4:75950811-75950830 | None:intergenic | 45.0% | |
| GTGTTTCCATGGTGTTCTGT+TGG | + | chr3_4:75951061-75951080 | Msa0522660:intron | 45.0% | |
| GTTTCCATGGTGTTCTGTTG+GGG | + | chr3_4:75951063-75951082 | Msa0522660:intron | 45.0% | |
| AAAACCCCAACAGAACACCA+TGG | - | chr3_4:75951070-75951089 | None:intergenic | 45.0% | |
| !! | TCAGTTCTGAAGCAAACCTC+TGG | + | chr3_4:75951435-75951454 | Msa0522660:intron | 45.0% |
| AGTGGTAAGTACAGAACCAG+AGG | - | chr3_4:75951454-75951473 | None:intergenic | 45.0% | |
| TGTGACTTCATTCTCTTCCG+AGG | + | chr3_4:75951893-75951912 | Msa0522660:CDS | 45.0% | |
| ! | CGGACTTGCAACATTTTTGC+AGG | + | chr3_4:75951929-75951948 | Msa0522660:CDS | 45.0% |
| AAAAGATGGGGTCTCATCAC+TGG | + | chr3_4:75951993-75952012 | Msa0522660:CDS | 45.0% | |
| AACCTCTGCTTTCCTCACAA+CGG | + | chr3_4:75952031-75952050 | Msa0522660:CDS | 45.0% | |
| GCAGCACAGCCAACTAAAAA+GGG | - | chr3_4:75952137-75952156 | None:intergenic | 45.0% | |
| AGCAGCACAGCCAACTAAAA+AGG | - | chr3_4:75952138-75952157 | None:intergenic | 45.0% | |
| AGAGACATTTGGACAGACGT+GGG | + | chr3_4:75952171-75952190 | Msa0522660:CDS | 45.0% | |
| CCACTTCGTTCTAGTACTTC+AGG | - | chr3_4:75952455-75952474 | None:intergenic | 45.0% | |
| ! | CCTGAAGTACTAGAACGAAG+TGG | + | chr3_4:75952452-75952471 | Msa0522660:CDS | 45.0% |
| !! | GAACGAAGTGGAGCTTTGTT+TGG | + | chr3_4:75952464-75952483 | Msa0522660:CDS | 45.0% |
| TCTTGAGGCTATTCCCTTCT+AGG | + | chr3_4:75952546-75952565 | Msa0522660:CDS | 45.0% | |
| ! | TTTCTGCTACTGGCCTAGAA+GGG | - | chr3_4:75952562-75952581 | None:intergenic | 45.0% |
| !! | TTTTCTGCTACTGGCCTAGA+AGG | - | chr3_4:75952563-75952582 | None:intergenic | 45.0% |
| AGTGTTGTACATAGTCGGAG+CGG | + | chr3_4:75952611-75952630 | Msa0522660:three_prime_UTR | 45.0% | |
| CGGAGCGGATGACATTTATA+AGG | + | chr3_4:75952626-75952645 | Msa0522660:three_prime_UTR | 45.0% | |
| CACACCGTGGTAAGTTGTTA+GGG | + | chr3_4:75952796-75952815 | Msa0522660:three_prime_UTR | 45.0% | |
| GGAGAAGTGAAGTGGTTGAG+AGG | - | chr3_4:75949830-75949849 | None:intergenic | 50.0% | |
| CTTTCGCAGTCACAAGCAAC+TGG | + | chr3_4:75949947-75949966 | Msa0522660:intron | 50.0% | |
| ACAGTGCCAACGAAGAACTG+TGG | - | chr3_4:75950428-75950447 | None:intergenic | 50.0% | |
| CTTCGTTGGCACTGTTGTTG+CGG | + | chr3_4:75950433-75950452 | Msa0522660:CDS | 50.0% | |
| ACTTCGGTAGGACACTGTTG+AGG | + | chr3_4:75950668-75950687 | Msa0522660:intron | 50.0% | |
| GGTGGTCAGTACAGAACTAG+AGG | - | chr3_4:75950868-75950887 | None:intergenic | 50.0% | |
| !! | TCCGAGGCACTGTTCTATGT+CGG | + | chr3_4:75951909-75951928 | Msa0522660:CDS | 50.0% |
| TCCGACATAGAACAGTGCCT+CGG | - | chr3_4:75951913-75951932 | None:intergenic | 50.0% | |
| ACCTCTGCTTTCCTCACAAC+GGG | + | chr3_4:75952032-75952051 | Msa0522660:CDS | 50.0% | |
| TTTGTATGTGACCTGGTCGG+TGG | + | chr3_4:75952082-75952101 | Msa0522660:CDS | 50.0% | |
| GAGAGACATTTGGACAGACG+TGG | + | chr3_4:75952170-75952189 | Msa0522660:CDS | 50.0% | |
| ATGCAGCTTGACGAGTCTAC+TGG | + | chr3_4:75952271-75952290 | Msa0522660:intron | 50.0% | |
| TCTAGTACTTCAGGTGACGC+AGG | - | chr3_4:75952446-75952465 | None:intergenic | 50.0% | |
| GCACACCGTGGTAAGTTGTT+AGG | + | chr3_4:75952795-75952814 | Msa0522660:three_prime_UTR | 50.0% | |
| ! | GGTCTCATCACTGGCCTCAA+AGG | + | chr3_4:75952002-75952021 | Msa0522660:CDS | 55.0% |
| ACCCGTTGTGAGGAAAGCAG+AGG | - | chr3_4:75952036-75952055 | None:intergenic | 55.0% | |
| ! | GACGAGTCTACTGGTCTGAG+AGG | + | chr3_4:75952280-75952299 | Msa0522660:intron | 55.0% |
| AGGTGGCTGATCGTGTCCAG+AGG | + | chr3_4:75951949-75951968 | Msa0522660:CDS | 60.0% | |
| ACAGACGTGGGTCATCGTGC+TGG | + | chr3_4:75952183-75952202 | Msa0522660:CDS | 60.0% | |
| GACCTGGTCGGTGGTTCGCA+TGG | + | chr3_4:75952091-75952110 | Msa0522660:CDS | 65.0% | |
| TGCCATGCGAACCACCGACC+AGG | - | chr3_4:75952096-75952115 | None:intergenic | 65.0% | |
| GTCGGTGGTTCGCATGGCAG+CGG | + | chr3_4:75952097-75952116 | Msa0522660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 75949714 | 75952894 | 75949714 | ID=Msa0522660;Name=Msa0522660 |
| chr3_4 | mRNA | 75949714 | 75952894 | 75949714 | ID=Msa0522660-mRNA-1;Parent=Msa0522660;Name=Msa0522660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=82|1|1|1|1|1|5|305|356 |
| chr3_4 | exon | 75949714 | 75949858 | 75949714 | ID=Msa0522660-mRNA-1:exon:21816;Parent=Msa0522660-mRNA-1 |
| chr3_4 | exon | 75949956 | 75950028 | 75949956 | ID=Msa0522660-mRNA-1:exon:21817;Parent=Msa0522660-mRNA-1 |
| chr3_4 | exon | 75950108 | 75950482 | 75950108 | ID=Msa0522660-mRNA-1:exon:21818;Parent=Msa0522660-mRNA-1 |
| chr3_4 | exon | 75951889 | 75952229 | 75951889 | ID=Msa0522660-mRNA-1:exon:21819;Parent=Msa0522660-mRNA-1 |
| chr3_4 | exon | 75952371 | 75952894 | 75952371 | ID=Msa0522660-mRNA-1:exon:21820;Parent=Msa0522660-mRNA-1 |
| chr3_4 | five_prime_UTR | 75949714 | 75949795 | 75949714 | ID=Msa0522660-mRNA-1:five_prime_utr;Parent=Msa0522660-mRNA-1 |
| chr3_4 | CDS | 75949796 | 75949858 | 75949796 | ID=Msa0522660-mRNA-1:cds;Parent=Msa0522660-mRNA-1 |
| chr3_4 | CDS | 75949956 | 75950028 | 75949956 | ID=Msa0522660-mRNA-1:cds;Parent=Msa0522660-mRNA-1 |
| chr3_4 | CDS | 75950108 | 75950482 | 75950108 | ID=Msa0522660-mRNA-1:cds;Parent=Msa0522660-mRNA-1 |
| chr3_4 | CDS | 75951889 | 75952229 | 75951889 | ID=Msa0522660-mRNA-1:cds;Parent=Msa0522660-mRNA-1 |
| chr3_4 | CDS | 75952371 | 75952589 | 75952371 | ID=Msa0522660-mRNA-1:cds;Parent=Msa0522660-mRNA-1 |
| chr3_4 | three_prime_UTR | 75952590 | 75952894 | 75952590 | ID=Msa0522660-mRNA-1:three_prime_utr;Parent=Msa0522660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
