Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1239830 | XP_013445014.1 | 96.567 | 233 | 6 | 2 | 1 | 232 | 1 | 232 | 4.13e-161 | 455 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1239830 | sp|O81323|LBD30_ARATH | 62.105 | 190 | 63 | 2 | 27 | 211 | 20 | 205 | 1.70e-75 | 231 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1239830 | A0A072TNF8 | 96.567 | 233 | 6 | 2 | 1 | 232 | 1 | 232 | 1.97e-161 | 455 |
Gene ID | Type | Classification |
---|---|---|
Msa1239830 | TF | LOB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012780 | Msa1239830 | 0.805516 | 1.285368e-49 | -8.615850e-47 |
Msa0012820 | Msa1239830 | 0.820189 | 7.822096e-53 | -8.615850e-47 |
Msa0061590 | Msa1239830 | 0.801143 | 1.034804e-48 | -8.615850e-47 |
Msa0061600 | Msa1239830 | 0.805752 | 1.146972e-49 | -8.615850e-47 |
Msa0106110 | Msa1239830 | 0.808387 | 3.176081e-50 | -8.615850e-47 |
Msa0106130 | Msa1239830 | 0.811161 | 8.040837e-51 | -8.615850e-47 |
Msa0627050 | Msa1239830 | -0.803997 | 2.668225e-49 | -8.615850e-47 |
Msa0749150 | Msa1239830 | -0.801898 | 7.246327e-49 | -8.615850e-47 |
Msa0772420 | Msa1239830 | 0.815340 | 9.719260e-52 | -8.615850e-47 |
Msa0813030 | Msa1239830 | -0.810772 | 9.763092e-51 | -8.615850e-47 |
Msa0828900 | Msa1239830 | -0.801300 | 9.609541e-49 | -8.615850e-47 |
Msa0139460 | Msa1239830 | 0.808207 | 3.468339e-50 | -8.615850e-47 |
Msa0226410 | Msa1239830 | 0.816204 | 6.238471e-52 | -8.615850e-47 |
Msa1239830 | Msa1281130 | 0.967653 | 1.416135e-127 | -8.615850e-47 |
Msa1239830 | Msa1320330 | 0.981979 | 6.316898e-154 | -8.615850e-47 |
Msa1239830 | Msa1357490 | 0.812835 | 3.471302e-51 | -8.615850e-47 |
Msa1239830 | Msa1376070 | 0.806794 | 6.920225e-50 | -8.615850e-47 |
Msa1239830 | Msa1407670 | 0.809511 | 1.824980e-50 | -8.615850e-47 |
Msa1239830 | Msa1449770 | 0.805223 | 1.480779e-49 | -8.615850e-47 |
Msa1239830 | Msa1459970 | 0.800518 | 1.388173e-48 | -8.615850e-47 |
Msa1239830 | Msa1460310 | 0.812997 | 3.198444e-51 | -8.615850e-47 |
Msa0469550 | Msa1239830 | 0.821653 | 3.601459e-53 | -8.615850e-47 |
Msa0985700 | Msa1239830 | 0.804841 | 1.780265e-49 | -8.615850e-47 |
Msa1076830 | Msa1239830 | 0.806994 | 6.276368e-50 | -8.615850e-47 |
Msa0264940 | Msa1239830 | 0.812929 | 3.310841e-51 | -8.615850e-47 |
Msa0302990 | Msa1239830 | 0.812058 | 5.131314e-51 | -8.615850e-47 |
Msa0304550 | Msa1239830 | 0.807060 | 6.078572e-50 | -8.615850e-47 |
Msa0341110 | Msa1239830 | 0.812379 | 4.367177e-51 | -8.615850e-47 |
Msa1109890 | Msa1239830 | 0.810397 | 1.176313e-50 | -8.615850e-47 |
Msa1182800 | Msa1239830 | -0.807707 | 4.432889e-50 | -8.615850e-47 |
Msa0515260 | Msa1239830 | 0.820964 | 5.193930e-53 | -8.615850e-47 |
Msa0853500 | Msa1239830 | -0.819600 | 1.066767e-52 | -8.615850e-47 |
Msa0883640 | Msa1239830 | 0.804622 | 1.977113e-49 | -8.615850e-47 |
Msa0910830 | Msa1239830 | 0.802709 | 4.932434e-49 | -8.615850e-47 |
Msa0960090 | Msa1239830 | 0.806666 | 7.364954e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1239830 | MtrunA17_Chr8g0351701 | 96.567 | 233 | 6 | 2 | 1 | 232 | 1 | 232 | 3.80e-165 | 455 |
Msa1239830 | MtrunA17_Chr7g0245871 | 54.872 | 195 | 82 | 2 | 24 | 212 | 27 | 221 | 9.90e-69 | 211 |
Msa1239830 | MtrunA17_Chr8g0351721 | 51.887 | 212 | 81 | 5 | 12 | 213 | 4 | 204 | 2.29e-64 | 199 |
Msa1239830 | MtrunA17_Chr7g0260971 | 67.544 | 114 | 37 | 0 | 13 | 126 | 3 | 116 | 1.08e-51 | 167 |
Msa1239830 | MtrunA17_Chr7g0261031 | 52.903 | 155 | 64 | 2 | 19 | 173 | 3 | 148 | 1.24e-51 | 167 |
Msa1239830 | MtrunA17_Chr1g0184271 | 70.874 | 103 | 30 | 0 | 24 | 126 | 12 | 114 | 1.60e-51 | 167 |
Msa1239830 | MtrunA17_Chr7g0245861 | 73.737 | 99 | 23 | 3 | 15 | 111 | 4 | 101 | 1.99e-46 | 150 |
Msa1239830 | MtrunA17_Chr6g0460951 | 56.522 | 138 | 53 | 1 | 24 | 154 | 40 | 177 | 2.36e-46 | 153 |
Msa1239830 | MtrunA17_Chr1g0184281 | 72.632 | 95 | 26 | 0 | 24 | 118 | 15 | 109 | 8.71e-46 | 151 |
Msa1239830 | MtrunA17_Chr5g0435641 | 59.821 | 112 | 45 | 0 | 19 | 130 | 2 | 113 | 3.74e-44 | 147 |
Msa1239830 | MtrunA17_Chr4g0058651 | 53.030 | 132 | 57 | 2 | 23 | 150 | 10 | 140 | 4.34e-40 | 136 |
Msa1239830 | MtrunA17_Chr4g0043421 | 53.333 | 120 | 55 | 1 | 13 | 132 | 4 | 122 | 1.40e-39 | 134 |
Msa1239830 | MtrunA17_Chr7g0227511 | 57.522 | 113 | 43 | 2 | 24 | 132 | 11 | 122 | 7.68e-39 | 132 |
Msa1239830 | MtrunA17_Chr2g0311601 | 51.695 | 118 | 56 | 1 | 15 | 132 | 4 | 120 | 3.59e-38 | 130 |
Msa1239830 | MtrunA17_Chr5g0437571 | 52.800 | 125 | 53 | 3 | 16 | 139 | 2 | 121 | 3.80e-37 | 128 |
Msa1239830 | MtrunA17_Chr3g0117121 | 58.095 | 105 | 43 | 1 | 24 | 128 | 10 | 113 | 6.57e-37 | 128 |
Msa1239830 | MtrunA17_Chr3g0114061 | 42.857 | 161 | 78 | 4 | 16 | 176 | 2 | 148 | 4.57e-36 | 125 |
Msa1239830 | MtrunA17_Chr5g0438091 | 47.586 | 145 | 71 | 3 | 14 | 158 | 29 | 168 | 4.76e-36 | 126 |
Msa1239830 | MtrunA17_Chr3g0106101 | 48.438 | 128 | 61 | 2 | 15 | 142 | 2 | 124 | 6.57e-36 | 125 |
Msa1239830 | MtrunA17_Chr5g0437401 | 55.882 | 102 | 44 | 1 | 25 | 126 | 12 | 112 | 5.84e-35 | 122 |
Msa1239830 | MtrunA17_Chr3g0115431 | 55.172 | 116 | 51 | 1 | 23 | 138 | 8 | 122 | 9.72e-35 | 123 |
Msa1239830 | MtrunA17_Chr6g0449641 | 56.863 | 102 | 43 | 1 | 24 | 125 | 9 | 109 | 2.02e-34 | 120 |
Msa1239830 | MtrunA17_Chr5g0402611 | 55.172 | 116 | 47 | 2 | 19 | 132 | 3 | 115 | 2.27e-34 | 125 |
Msa1239830 | MtrunA17_Chr3g0129071 | 52.586 | 116 | 54 | 1 | 17 | 132 | 40 | 154 | 4.33e-34 | 122 |
Msa1239830 | MtrunA17_Chr3g0113891 | 56.842 | 95 | 40 | 1 | 25 | 119 | 15 | 108 | 6.21e-33 | 117 |
Msa1239830 | MtrunA17_Chr3g0097221 | 51.786 | 112 | 53 | 1 | 19 | 130 | 2 | 112 | 3.21e-32 | 119 |
Msa1239830 | MtrunA17_Chr6g0449651 | 53.333 | 105 | 48 | 1 | 24 | 128 | 67 | 170 | 9.71e-32 | 115 |
Msa1239830 | MtrunA17_Chr6g0460941 | 59.091 | 88 | 36 | 0 | 24 | 111 | 7 | 94 | 4.63e-31 | 110 |
Msa1239830 | MtrunA17_Chr4g0030001 | 47.748 | 111 | 56 | 2 | 23 | 132 | 23 | 132 | 4.57e-29 | 107 |
Msa1239830 | MtrunA17_Chr8g0353981 | 61.728 | 81 | 30 | 1 | 24 | 104 | 7 | 86 | 1.29e-28 | 107 |
Msa1239830 | MtrunA17_Chr5g0432451 | 55.263 | 114 | 50 | 1 | 16 | 129 | 35 | 147 | 4.71e-28 | 106 |
Msa1239830 | MtrunA17_Chr1g0200201 | 47.222 | 108 | 56 | 1 | 25 | 132 | 73 | 179 | 8.41e-28 | 105 |
Msa1239830 | MtrunA17_Chr5g0444351 | 43.519 | 108 | 60 | 1 | 23 | 130 | 4 | 110 | 1.60e-25 | 97.4 |
Msa1239830 | MtrunA17_Chr7g0225111 | 41.509 | 106 | 61 | 1 | 25 | 130 | 6 | 110 | 2.33e-24 | 93.6 |
Msa1239830 | MtrunA17_Chr8g0374601 | 43.119 | 109 | 61 | 1 | 24 | 132 | 26 | 133 | 2.80e-23 | 95.1 |
Msa1239830 | MtrunA17_Chr8g0374591 | 43.119 | 109 | 61 | 1 | 24 | 132 | 8 | 115 | 5.73e-22 | 87.8 |
Msa1239830 | MtrunA17_Chr4g0059901 | 41.414 | 99 | 57 | 1 | 20 | 118 | 6 | 103 | 1.70e-19 | 84.3 |
Msa1239830 | MtrunA17_Chr8g0342351 | 38.095 | 105 | 64 | 1 | 25 | 129 | 13 | 116 | 3.86e-19 | 83.6 |
Msa1239830 | MtrunA17_Chr4g0040831 | 31.928 | 166 | 96 | 4 | 17 | 166 | 8 | 172 | 8.26e-19 | 81.3 |
Msa1239830 | MtrunA17_Chr8g0374581 | 38.182 | 110 | 66 | 2 | 24 | 132 | 8 | 116 | 6.59e-18 | 79.3 |
Msa1239830 | MtrunA17_Chr2g0330201 | 40.404 | 99 | 58 | 1 | 20 | 118 | 15 | 112 | 1.18e-17 | 80.1 |
Msa1239830 | MtrunA17_Chr6g0452691 | 39.806 | 103 | 60 | 2 | 25 | 126 | 10 | 111 | 3.75e-16 | 73.9 |
Msa1239830 | MtrunA17_Chr6g0452671 | 36.735 | 98 | 61 | 1 | 25 | 122 | 12 | 108 | 1.47e-15 | 72.8 |
Msa1239830 | MtrunA17_Chr4g0055441 | 35.922 | 103 | 64 | 2 | 25 | 126 | 3 | 104 | 1.59e-15 | 71.6 |
Msa1239830 | MtrunA17_Chr6g0452661 | 33.981 | 103 | 66 | 2 | 25 | 126 | 10 | 111 | 8.69e-14 | 68.6 |
Msa1239830 | MtrunA17_Chr2g0326041 | 52.941 | 51 | 23 | 1 | 23 | 73 | 32 | 81 | 2.46e-12 | 61.2 |
Msa1239830 | MtrunA17_Chr2g0326051 | 44.444 | 63 | 35 | 0 | 70 | 132 | 5 | 67 | 6.23e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1239830 | AT4G00220.1 | 62.105 | 190 | 63 | 2 | 27 | 211 | 20 | 205 | 1.73e-76 | 231 |
Msa1239830 | AT2G45420.1 | 57.534 | 219 | 73 | 5 | 27 | 226 | 40 | 257 | 5.24e-73 | 223 |
Msa1239830 | AT4G00210.1 | 50.242 | 207 | 93 | 4 | 16 | 213 | 3 | 208 | 2.96e-60 | 189 |
Msa1239830 | AT2G42430.1 | 65.254 | 118 | 41 | 0 | 13 | 130 | 4 | 121 | 1.77e-52 | 170 |
Msa1239830 | AT3G03760.1 | 71.963 | 107 | 30 | 0 | 24 | 130 | 51 | 157 | 2.13e-51 | 168 |
Msa1239830 | AT2G45410.1 | 64.655 | 116 | 36 | 1 | 27 | 137 | 19 | 134 | 2.48e-51 | 165 |
Msa1239830 | AT3G58190.1 | 48.588 | 177 | 79 | 3 | 24 | 198 | 11 | 177 | 5.10e-50 | 163 |
Msa1239830 | AT2G42440.1 | 64.423 | 104 | 37 | 0 | 19 | 122 | 2 | 105 | 3.95e-47 | 156 |
Msa1239830 | AT5G06080.1 | 49.640 | 139 | 66 | 1 | 25 | 159 | 8 | 146 | 1.01e-44 | 148 |
Msa1239830 | AT2G31310.1 | 61.062 | 113 | 43 | 1 | 20 | 132 | 3 | 114 | 2.17e-44 | 147 |
Msa1239830 | AT5G63090.4 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
Msa1239830 | AT5G63090.3 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
Msa1239830 | AT5G63090.2 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
Msa1239830 | AT5G63090.1 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
Msa1239830 | AT3G27650.1 | 57.143 | 105 | 44 | 1 | 24 | 128 | 39 | 142 | 1.26e-36 | 127 |
Msa1239830 | AT2G30130.1 | 52.459 | 122 | 53 | 2 | 14 | 135 | 2 | 118 | 6.46e-36 | 126 |
Msa1239830 | AT1G31320.1 | 57.609 | 92 | 38 | 1 | 20 | 111 | 9 | 99 | 1.88e-33 | 119 |
Msa1239830 | AT5G66870.1 | 50.000 | 138 | 67 | 2 | 19 | 156 | 2 | 137 | 2.76e-33 | 122 |
Msa1239830 | AT3G11090.1 | 42.581 | 155 | 76 | 4 | 25 | 171 | 12 | 161 | 3.93e-32 | 115 |
Msa1239830 | AT1G07900.1 | 48.598 | 107 | 54 | 1 | 23 | 129 | 32 | 137 | 1.13e-30 | 112 |
Msa1239830 | AT2G23660.2 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
Msa1239830 | AT2G23660.3 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
Msa1239830 | AT2G23660.1 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
Msa1239830 | AT1G16530.1 | 42.222 | 135 | 74 | 3 | 15 | 146 | 5 | 138 | 1.83e-30 | 111 |
Msa1239830 | AT2G28500.1 | 51.456 | 103 | 49 | 1 | 24 | 126 | 55 | 156 | 2.60e-30 | 112 |
Msa1239830 | AT2G30340.1 | 45.833 | 120 | 64 | 1 | 16 | 135 | 44 | 162 | 6.49e-29 | 110 |
Msa1239830 | AT2G30340.2 | 45.833 | 120 | 64 | 1 | 16 | 135 | 45 | 163 | 7.52e-29 | 109 |
Msa1239830 | AT1G65620.1 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
Msa1239830 | AT1G65620.4 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
Msa1239830 | AT1G65620.3 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
Msa1239830 | AT1G65620.5 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
Msa1239830 | AT1G65620.2 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
Msa1239830 | AT3G26660.1 | 45.631 | 103 | 55 | 1 | 25 | 127 | 6 | 107 | 1.95e-28 | 104 |
Msa1239830 | AT3G26620.1 | 45.631 | 103 | 55 | 1 | 25 | 127 | 6 | 107 | 3.75e-28 | 103 |
Msa1239830 | AT2G40470.2 | 52.137 | 117 | 55 | 1 | 13 | 129 | 9 | 124 | 2.60e-27 | 103 |
Msa1239830 | AT2G40470.1 | 52.137 | 117 | 55 | 1 | 13 | 129 | 34 | 149 | 3.57e-27 | 104 |
Msa1239830 | AT3G50510.1 | 38.686 | 137 | 82 | 2 | 24 | 160 | 12 | 146 | 3.07e-26 | 101 |
Msa1239830 | AT3G50510.2 | 38.686 | 137 | 82 | 2 | 24 | 160 | 12 | 146 | 3.07e-26 | 101 |
Msa1239830 | AT5G35900.1 | 31.351 | 185 | 117 | 4 | 25 | 200 | 6 | 189 | 1.91e-20 | 86.3 |
Msa1239830 | AT3G13850.1 | 38.462 | 104 | 63 | 1 | 25 | 128 | 37 | 139 | 1.04e-18 | 82.8 |
Msa1239830 | AT1G72980.1 | 33.871 | 124 | 80 | 2 | 20 | 142 | 9 | 131 | 3.89e-16 | 74.7 |
Msa1239830 | AT3G47870.1 | 35.398 | 113 | 69 | 2 | 16 | 128 | 31 | 139 | 4.65e-16 | 76.3 |
Msa1239830 | AT4G22700.1 | 30.065 | 153 | 101 | 4 | 21 | 172 | 2 | 149 | 4.20e-14 | 68.9 |
Msa1239830 | AT1G06280.1 | 42.667 | 75 | 42 | 1 | 25 | 99 | 25 | 98 | 6.94e-14 | 68.6 |
Find 71 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGAGCCCCGCCAATATT+TGG | 0.160749 | 8_2:-21858598 | Msa1239830:CDS |
TAGATCAAAGATTGTTCATT+TGG | 0.270427 | 8_2:+21858449 | None:intergenic |
CAAATATTGGCGGGGCTCAT+TGG | 0.328917 | 8_2:+21858599 | None:intergenic |
ACATCATCCACTAGCAATAA+TGG | 0.352137 | 8_2:-21858567 | Msa1239830:CDS |
GGTGGAGGTGTTGGTGGTTG+AGG | 0.362273 | 8_2:+21858750 | None:intergenic |
ATGGCTGAAGAAGGGGCTAA+TGG | 0.363007 | 8_2:+21858693 | None:intergenic |
GCATGACCCATGATGAAGTT+TGG | 0.364374 | 8_2:+21858631 | None:intergenic |
GAAGACAAGTCATATGTATC+TGG | 0.372604 | 8_2:+21858669 | None:intergenic |
CATGACCCATGATGAAGTTT+GGG | 0.376247 | 8_2:+21858632 | None:intergenic |
AATGAGCCCCGCCAATATTT+GGG | 0.384284 | 8_2:-21858597 | Msa1239830:CDS |
AGGTTGAGAGATCCCGTCTT+TGG | 0.394288 | 8_2:-21863400 | Msa1239830:CDS |
AGTGCTTGTGGTGGAGGTGT+TGG | 0.400398 | 8_2:+21858741 | None:intergenic |
AAATATTGGCGGGGCTCATT+GGG | 0.412129 | 8_2:+21858600 | None:intergenic |
TATCTTTACTCTTCAGCAAC+AGG | 0.415923 | 8_2:-21863365 | Msa1239830:intron |
TGGCTGAAGAAGGGGCTAAT+GGG | 0.433908 | 8_2:+21858694 | None:intergenic |
ATGTGCCACTACCCAAATAT+TGG | 0.434191 | 8_2:+21858586 | None:intergenic |
TTTGAGAAGGAAGTGTATCC+CGG | 0.449160 | 8_2:-21863584 | Msa1239830:CDS |
CCTTACTTCGATTCGGAGCA+AGG | 0.451165 | 8_2:-21863547 | Msa1239830:CDS |
TGCTTGAGCTTCATAACAAA+TGG | 0.458370 | 8_2:+21863423 | None:intergenic |
ATTGGAAGTGCTTGTGGTGG+AGG | 0.458768 | 8_2:+21858735 | None:intergenic |
GCAACCACTACCGCTACAAC+CGG | 0.465462 | 8_2:+21863660 | None:intergenic |
AAAGTTGCTACAAAATGTTC+CGG | 0.465613 | 8_2:-21863473 | Msa1239830:CDS |
GCTTGTGGTGGAGGTGTTGG+TGG | 0.478286 | 8_2:+21858744 | None:intergenic |
TTGGAAAGAGAATGAGATGA+TGG | 0.479844 | 8_2:+21858468 | None:intergenic |
CCTTGCTCCGAATCGAAGTA+AGG | 0.493406 | 8_2:+21863547 | None:intergenic |
GTATCTGGCATGGCTGAAGA+AGG | 0.503262 | 8_2:+21858684 | None:intergenic |
GCCACTACCCAAATATTGGC+GGG | 0.507847 | 8_2:+21858590 | None:intergenic |
CCCCGCCAATATTTGGGTAG+TGG | 0.517665 | 8_2:-21858591 | Msa1239830:CDS |
AACTCCGGTTGTAGCGGTAG+TGG | 0.518960 | 8_2:-21863664 | Msa1239830:CDS |
TGGAAAGAGAATGAGATGAT+GGG | 0.519184 | 8_2:+21858469 | None:intergenic |
AGTGGTTGCAGTGGTGGTGG+TGG | 0.524928 | 8_2:-21863646 | Msa1239830:CDS |
AAGTACCCCAAACTTCATCA+TGG | 0.535257 | 8_2:-21858638 | Msa1239830:CDS |
GGTAGTGGTTGCAGTGGTGG+TGG | 0.549172 | 8_2:-21863649 | Msa1239830:CDS |
ATCACCACCATTATTGCTAG+TGG | 0.552303 | 8_2:+21858560 | None:intergenic |
GAGGTACTTCATATGTAGCT+AGG | 0.553041 | 8_2:+21858769 | None:intergenic |
GCATCAAGACGCTTGTGTAC+CGG | 0.555181 | 8_2:+21863454 | None:intergenic |
TATCTGGCATGGCTGAAGAA+GGG | 0.557341 | 8_2:+21858685 | None:intergenic |
ATGAGCAACACAACCAAAGA+CGG | 0.560188 | 8_2:+21863387 | None:intergenic |
TGCCACTACCCAAATATTGG+CGG | 0.560339 | 8_2:+21858589 | None:intergenic |
AGAAGGGGCTAATGGGAGGT+TGG | 0.565320 | 8_2:+21858701 | None:intergenic |
AGTGGTGCTTGTGGCCCTTG+TGG | 0.572724 | 8_2:-21863619 | Msa1239830:CDS |
ATCTGGCATGGCTGAAGAAG+GGG | 0.574156 | 8_2:+21858686 | None:intergenic |
TGGTGGTGATCTTCAAGCAT+TGG | 0.576068 | 8_2:-21858547 | Msa1239830:CDS |
GGTGGAAACAGTGGTGCTTG+TGG | 0.580450 | 8_2:-21863628 | Msa1239830:CDS |
GCAGAACTCTCCTACTTACA+AGG | 0.583111 | 8_2:-21858795 | Msa1239830:CDS |
TTGAGAAGGAAGTGTATCCC+GGG | 0.588366 | 8_2:-21863583 | Msa1239830:CDS |
GGTACACAAGCGTCTTGATG+CGG | 0.599993 | 8_2:-21863452 | Msa1239830:CDS |
TCCACCACAAGCACTTCCAA+TGG | 0.600735 | 8_2:-21858733 | Msa1239830:CDS |
AGCTAGGTGGCCTTGTAAGT+AGG | 0.602023 | 8_2:+21858785 | None:intergenic |
GGAAAGAGAATGAGATGATG+GGG | 0.602088 | 8_2:+21858470 | None:intergenic |
AGCGGTAGTGGTTGCAGTGG+TGG | 0.604160 | 8_2:-21863652 | Msa1239830:CDS |
ACATTTCGCAGCGGTTCACA+AGG | 0.604702 | 8_2:-21863518 | Msa1239830:CDS |
TTTGTTATGAAGCTCAAGCA+AGG | 0.608232 | 8_2:-21863420 | Msa1239830:CDS |
GAGACCATTGGAAGTGCTTG+TGG | 0.614748 | 8_2:+21858729 | None:intergenic |
CTGAAGAAGGGGCTAATGGG+AGG | 0.615538 | 8_2:+21858697 | None:intergenic |
TGAGCAACACAACCAAAGAC+GGG | 0.618298 | 8_2:+21863388 | None:intergenic |
CCACTACCCAAATATTGGCG+GGG | 0.618911 | 8_2:+21858591 | None:intergenic |
AGTACCCCAAACTTCATCAT+GGG | 0.621265 | 8_2:-21858637 | Msa1239830:CDS |
GCATCAGAGCATGCAACATG+AGG | 0.623709 | 8_2:+21858492 | None:intergenic |
CAAGTCATATGTATCTGGCA+TGG | 0.623715 | 8_2:+21858674 | None:intergenic |
TTTAAGATGAGTATAAACTC+CGG | 0.626118 | 8_2:-21863679 | None:intergenic |
AGGTTGGCTAGTGAGACCAT+TGG | 0.630062 | 8_2:+21858717 | None:intergenic |
AGTATAAACTCCGGTTGTAG+CGG | 0.645022 | 8_2:-21863670 | Msa1239830:CDS |
AGTGGTGGTGGTGGAAACAG+TGG | 0.645973 | 8_2:-21863637 | Msa1239830:CDS |
ACCATTGGAAGTGCTTGTGG+TGG | 0.654201 | 8_2:+21858732 | None:intergenic |
AGGCGCTTCACATTTCGCAG+CGG | 0.690521 | 8_2:-21863527 | Msa1239830:CDS |
AAAACTTGCACGCACCACAA+GGG | 0.691601 | 8_2:+21863605 | None:intergenic |
TCATCCACTAGCAATAATGG+TGG | 0.700074 | 8_2:-21858564 | Msa1239830:CDS |
TGTAGCGGTAGTGGTTGCAG+TGG | 0.700382 | 8_2:-21863655 | Msa1239830:CDS |
GTACTTCATATGTAGCTAGG+TGG | 0.723309 | 8_2:+21858772 | None:intergenic |
ATGACCCATGATGAAGTTTG+GGG | 0.727107 | 8_2:+21858633 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATAAATAATTTTTTTAA+GGG | + | chr8_2:21861428-21861447 | None:intergenic | 0.0% |
!!! | TACTTATTTTCTTTAAATTA+AGG | + | chr8_2:21859950-21859969 | None:intergenic | 10.0% |
!! | TTTAAAAAATATAACAAGAT+GGG | + | chr8_2:21860001-21860020 | None:intergenic | 10.0% |
!!! | TTTTAAAAAATATAACAAGA+TGG | + | chr8_2:21860002-21860021 | None:intergenic | 10.0% |
!!! | TGTTATATTTTTTAAAATAG+AGG | - | chr8_2:21860005-21860024 | Msa1239830:intron | 10.0% |
!!! | TATTTTTTAAAAGAAGAATT+AGG | + | chr8_2:21861115-21861134 | None:intergenic | 10.0% |
!!! | CTAATATTTTGTTTAAAATA+TGG | + | chr8_2:21862020-21862039 | None:intergenic | 10.0% |
!! | TTGATTAATGACTTAATTAT+TGG | - | chr8_2:21858829-21858848 | Msa1239830:intron | 15.0% |
!!! | AATCTAAACATCTTTTTTTA+TGG | + | chr8_2:21859062-21859081 | None:intergenic | 15.0% |
!!! | TTATAGTTAGTAATTTTTAG+CGG | - | chr8_2:21859214-21859233 | Msa1239830:intron | 15.0% |
!!! | AGTTTTTTTATTTTGAAGAT+GGG | + | chr8_2:21859376-21859395 | None:intergenic | 15.0% |
!!! | AAGTTTTTTTATTTTGAAGA+TGG | + | chr8_2:21859377-21859396 | None:intergenic | 15.0% |
!! | ACTTATATATAACTAATGAT+CGG | - | chr8_2:21859393-21859412 | Msa1239830:intron | 15.0% |
!!! | ATTAAGTAAACGATTTTTTA+TGG | - | chr8_2:21859480-21859499 | Msa1239830:intron | 15.0% |
!! | TATCTTAATGTGAATAAATT+GGG | - | chr8_2:21860442-21860461 | Msa1239830:intron | 15.0% |
!!! | GAGTATATATTTTTTAAATC+AGG | + | chr8_2:21860541-21860560 | None:intergenic | 15.0% |
!! | TTACAATATGTGAAAATAAA+AGG | + | chr8_2:21860945-21860964 | None:intergenic | 15.0% |
!! | CACATATTGTAAAATAAAAA+TGG | - | chr8_2:21860953-21860972 | Msa1239830:intron | 15.0% |
!! | TGTAAATTATACTTATTACT+AGG | + | chr8_2:21861166-21861185 | None:intergenic | 15.0% |
!!! | AAAAGTTACAAAATTTTATG+CGG | - | chr8_2:21861216-21861235 | Msa1239830:intron | 15.0% |
!! | AATTAAGAAAAAAAATGGAT+TGG | + | chr8_2:21861780-21861799 | None:intergenic | 15.0% |
!!! | TTTTTAGTTAGAAAATATGA+TGG | + | chr8_2:21861878-21861897 | None:intergenic | 15.0% |
!! | TTAAACAAAATATTAGAAAG+AGG | - | chr8_2:21862024-21862043 | Msa1239830:intron | 15.0% |
!!! | TTTTCACTATTTTACAAAAT+TGG | + | chr8_2:21862081-21862100 | None:intergenic | 15.0% |
!!! | TTTTGTAAAATAGTGAAAAT+AGG | - | chr8_2:21862082-21862101 | Msa1239830:intron | 15.0% |
!! | TTTGTAAAATAGTGAAAATA+GGG | - | chr8_2:21862083-21862102 | Msa1239830:intron | 15.0% |
!!! | TTTTGACAGTTATAAAATAA+GGG | + | chr8_2:21862223-21862242 | None:intergenic | 15.0% |
!!! | ATTTTGACAGTTATAAAATA+AGG | + | chr8_2:21862224-21862243 | None:intergenic | 15.0% |
!!! | TTATTTTATAACTGTCAAAA+TGG | - | chr8_2:21862223-21862242 | Msa1239830:intron | 15.0% |
!!! | ATATTTCTTTTTTGTTTCAT+AGG | - | chr8_2:21863305-21863324 | Msa1239830:intron | 15.0% |
!! | ACTCAAATTTCATATTGATA+AGG | - | chr8_2:21859108-21859127 | Msa1239830:intron | 20.0% |
!!! | AAGATTTTGTTGATGAATAT+TGG | + | chr8_2:21859538-21859557 | None:intergenic | 20.0% |
!! | TAATTGATTAAGAAGTGATA+TGG | - | chr8_2:21859745-21859764 | Msa1239830:intron | 20.0% |
!! | TGGCAAATTGATTAATTATT+TGG | - | chr8_2:21860151-21860170 | Msa1239830:intron | 20.0% |
!! | AGTAAATGTTACTACTATAT+TGG | - | chr8_2:21860360-21860379 | Msa1239830:intron | 20.0% |
!! | GTATCTTAATGTGAATAAAT+TGG | - | chr8_2:21860441-21860460 | Msa1239830:intron | 20.0% |
!!! | TACATGTTGATATTGATTAA+TGG | + | chr8_2:21860563-21860582 | None:intergenic | 20.0% |
!! | TAGAATGAAATACAGATTAT+TGG | + | chr8_2:21860806-21860825 | None:intergenic | 20.0% |
!! | AAATAGATGACTAAAAATGA+GGG | + | chr8_2:21861089-21861108 | None:intergenic | 20.0% |
!! | AAAATAGATGACTAAAAATG+AGG | + | chr8_2:21861090-21861109 | None:intergenic | 20.0% |
!!! | AAAATTTTATGCGGTTAATA+CGG | - | chr8_2:21861225-21861244 | Msa1239830:intron | 20.0% |
!! | TATACATTCTACTAACAAAA+GGG | + | chr8_2:21861391-21861410 | None:intergenic | 20.0% |
!! | ATATACATTCTACTAACAAA+AGG | + | chr8_2:21861392-21861411 | None:intergenic | 20.0% |
!! | AATTAAAGACTTAAAGCAAA+GGG | + | chr8_2:21861546-21861565 | None:intergenic | 20.0% |
!! | TAATTAAAGACTTAAAGCAA+AGG | + | chr8_2:21861547-21861566 | None:intergenic | 20.0% |
!! | ACTGCAATTAAGAAAAAAAA+TGG | + | chr8_2:21861785-21861804 | None:intergenic | 20.0% |
!!! | TTTTTTCTTAATTGCAGTTT+TGG | - | chr8_2:21861787-21861806 | Msa1239830:intron | 20.0% |
!! | TCCACAAAAAGATATAAATA+GGG | + | chr8_2:21861815-21861834 | None:intergenic | 20.0% |
!! | TTCCACAAAAAGATATAAAT+AGG | + | chr8_2:21861816-21861835 | None:intergenic | 20.0% |
!!! | TTTATATCTTTTTGTGGAAT+TGG | - | chr8_2:21861817-21861836 | Msa1239830:intron | 20.0% |
!!! | AACTGTCGAATTTTAAAATA+GGG | + | chr8_2:21862053-21862072 | None:intergenic | 20.0% |
!!! | AAACTGTCGAATTTTAAAAT+AGG | + | chr8_2:21862052-21862071 | None:intergenic | 20.0% |
!!! | ATTTTAAAATTCGACAGTTT+TGG | - | chr8_2:21861847-21861866 | Msa1239830:intron | 20.0% |
!!! | ATTTTAAAATTCGACAGTTT+TGG | + | chr8_2:21861847-21861866 | None:intergenic | 20.0% |
!!! | AAACTGTCGAATTTTAAAAT+AGG | - | chr8_2:21862052-21862071 | Msa1239830:intron | 20.0% |
!!! | AACTGTCGAATTTTAAAATA+GGG | - | chr8_2:21862053-21862072 | Msa1239830:intron | 20.0% |
!! | TTGTAAAATAGTGAAAATAG+GGG | - | chr8_2:21862084-21862103 | Msa1239830:intron | 20.0% |
!! | AGGATTCTACTAAAAAAAAT+TGG | + | chr8_2:21862129-21862148 | None:intergenic | 20.0% |
!!! | CAAAGTTCTAAATTTTTGAA+CGG | + | chr8_2:21862270-21862289 | None:intergenic | 20.0% |
!! | AAATAACCAAATAAGAAAAG+TGG | - | chr8_2:21862898-21862917 | Msa1239830:intron | 20.0% |
! | ATCATGCTATATTCTAGATA+AGG | - | chr8_2:21858861-21858880 | Msa1239830:intron | 25.0% |
! | TAGAAACCACAAAAACTATT+TGG | - | chr8_2:21859081-21859100 | Msa1239830:intron | 25.0% |
!! | GTTTTTCCAAATAGTTTTTG+TGG | + | chr8_2:21859090-21859109 | None:intergenic | 25.0% |
!!! | CCTTGTAAGTTTTTTTGAAA+CGG | - | chr8_2:21859176-21859195 | Msa1239830:intron | 25.0% |
! | TGGATATGATGAGTAATTTA+CGG | + | chr8_2:21859287-21859306 | None:intergenic | 25.0% |
!!! | TTTTTATTTTGAAGATGGGT+GGG | + | chr8_2:21859372-21859391 | None:intergenic | 25.0% |
!!! | TTTTTTATTTTGAAGATGGG+TGG | + | chr8_2:21859373-21859392 | None:intergenic | 25.0% |
! | TTCTTGCTTGTAAAAATGTA+AGG | + | chr8_2:21859459-21859478 | None:intergenic | 25.0% |
! | TATGGAAAGTTGAAACTAAA+AGG | - | chr8_2:21859498-21859517 | Msa1239830:intron | 25.0% |
! | GAACTAATACTAGTAATCTA+TGG | - | chr8_2:21859792-21859811 | Msa1239830:intron | 25.0% |
!! | TGTTTCTATATGAGAAGATA+GGG | + | chr8_2:21859927-21859946 | None:intergenic | 25.0% |
! | AAAAATATAACAAGATGGGT+GGG | + | chr8_2:21859997-21860016 | None:intergenic | 25.0% |
! | AAAAAATATAACAAGATGGG+TGG | + | chr8_2:21859998-21860017 | None:intergenic | 25.0% |
!!! | GTCTTTCTTGTTATTGTTTT+TGG | - | chr8_2:21860085-21860104 | Msa1239830:intron | 25.0% |
! | ACTACTATATTGGAGTATAT+TGG | - | chr8_2:21860370-21860389 | Msa1239830:intron | 25.0% |
!!! | ATACTAGTATTTTGTTTGTC+AGG | - | chr8_2:21860397-21860416 | Msa1239830:intron | 25.0% |
! | TTTATATCCCAAAATGACTT+TGG | - | chr8_2:21860625-21860644 | Msa1239830:intron | 25.0% |
!! | TTTCATGAAGCAAAACATTT+TGG | - | chr8_2:21860710-21860729 | Msa1239830:intron | 25.0% |
! | ATAGAAAAGAAACAACTCAA+GGG | + | chr8_2:21860908-21860927 | None:intergenic | 25.0% |
! | TATAGAAAAGAAACAACTCA+AGG | + | chr8_2:21860909-21860928 | None:intergenic | 25.0% |
! | TATACGACTCATTTCATATA+TGG | + | chr8_2:21861036-21861055 | None:intergenic | 25.0% |
! | TCTAATTTAACCAAAGTCTT+GGG | + | chr8_2:21861330-21861349 | None:intergenic | 25.0% |
! | TTCTAATTTAACCAAAGTCT+TGG | + | chr8_2:21861331-21861350 | None:intergenic | 25.0% |
! | GAAAAATGAGAACTATAAAC+TGG | + | chr8_2:21861610-21861629 | None:intergenic | 25.0% |
!! | TCCCTATTTATATCTTTTTG+TGG | - | chr8_2:21861811-21861830 | Msa1239830:intron | 25.0% |
! | TTAGTTAGAAAATATGATGG+AGG | + | chr8_2:21861875-21861894 | None:intergenic | 25.0% |
!!! | ACTGTCGAATTTTAAAATAG+GGG | - | chr8_2:21862054-21862073 | Msa1239830:intron | 25.0% |
! | TGTAAAATAGTGAAAATAGG+GGG | - | chr8_2:21862085-21862104 | Msa1239830:intron | 25.0% |
!!! | TGTCTTAAGAGTATTGTTTA+AGG | + | chr8_2:21862149-21862168 | None:intergenic | 25.0% |
!! | AAACCTTTAGTTTATACCAA+CGG | - | chr8_2:21862179-21862198 | Msa1239830:intron | 25.0% |
! | TTGCCCAAATTAAAATGATT+TGG | - | chr8_2:21862372-21862391 | Msa1239830:intron | 25.0% |
! | TGCCCAAATTAAAATGATTT+GGG | - | chr8_2:21862373-21862392 | Msa1239830:intron | 25.0% |
!!! | ACCCCAAATCATTTTAATTT+GGG | + | chr8_2:21862378-21862397 | None:intergenic | 25.0% |
!!! | AACCCCAAATCATTTTAATT+TGG | + | chr8_2:21862379-21862398 | None:intergenic | 25.0% |
!! | ATTAAAATGATTTGGGGTTA+TGG | - | chr8_2:21862380-21862399 | Msa1239830:intron | 25.0% |
! | AATCATAAAAAATAGGACCT+GGG | + | chr8_2:21862516-21862535 | None:intergenic | 25.0% |
! | AAATCATAAAAAATAGGACC+TGG | + | chr8_2:21862517-21862536 | None:intergenic | 25.0% |
! | GAGCAGAAATCATAAAAAAT+AGG | + | chr8_2:21862523-21862542 | None:intergenic | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | + | chr8_2:21862731-21862750 | None:intergenic | 25.0% |
! | TAGTATTTCTCTCTTCTTAT+TGG | + | chr8_2:21862744-21862763 | None:intergenic | 25.0% |
! | AATAAGAAGAGAGAAATACT+AGG | - | chr8_2:21862743-21862762 | Msa1239830:intron | 25.0% |
AAAGTTGCTACAAAATGTTC+CGG | - | chr8_2:21858664-21858683 | Msa1239830:CDS | 30.0% | |
AAAGGATATATACTAGGGAT+AGG | + | chr8_2:21858926-21858945 | None:intergenic | 30.0% | |
GAGAGAAAGGATATATACTA+GGG | + | chr8_2:21858931-21858950 | None:intergenic | 30.0% | |
AGAGAGAAAGGATATATACT+AGG | + | chr8_2:21858932-21858951 | None:intergenic | 30.0% | |
GTCAAGACAAGAAAAAGAAA+GGG | + | chr8_2:21859028-21859047 | None:intergenic | 30.0% | |
AGTCAAGACAAGAAAAAGAA+AGG | + | chr8_2:21859029-21859048 | None:intergenic | 30.0% | |
! | TTCTTTTTCTTGTCTTGACT+TGG | - | chr8_2:21859029-21859048 | Msa1239830:intron | 30.0% |
CCGTTTCAAAAAAACTTACA+AGG | + | chr8_2:21859179-21859198 | None:intergenic | 30.0% | |
TGGAAAACAAACTTACAATG+TGG | + | chr8_2:21859315-21859334 | None:intergenic | 30.0% | |
!! | CATTGTAAGTTTGTTTTCCA+AGG | - | chr8_2:21859315-21859334 | Msa1239830:intron | 30.0% |
! | TTGTTTTCCAAGGATGTTTA+TGG | - | chr8_2:21859325-21859344 | Msa1239830:intron | 30.0% |
TGATTAAGAAGTGATATGGT+CGG | - | chr8_2:21859749-21859768 | Msa1239830:intron | 30.0% | |
GATTCAACCATTAACATCAT+TGG | - | chr8_2:21859814-21859833 | Msa1239830:intron | 30.0% | |
ACTAAGACCAATGATGTTAA+TGG | + | chr8_2:21859824-21859843 | None:intergenic | 30.0% | |
!!! | TCTTAGTTTTTGCTGGTTTT+AGG | - | chr8_2:21859837-21859856 | Msa1239830:intron | 30.0% |
!!! | CTTAGTTTTTGCTGGTTTTA+GGG | - | chr8_2:21859838-21859857 | Msa1239830:intron | 30.0% |
!!! | TTAGTTTTTGCTGGTTTTAG+GGG | - | chr8_2:21859839-21859858 | Msa1239830:intron | 30.0% |
! | GTGTTTCTATATGAGAAGAT+AGG | + | chr8_2:21859928-21859947 | None:intergenic | 30.0% |
ACAAGAAAGACCACAATTTA+GGG | + | chr8_2:21860076-21860095 | None:intergenic | 30.0% | |
AACAAGAAAGACCACAATTT+AGG | + | chr8_2:21860077-21860096 | None:intergenic | 30.0% | |
TTACTAGTACTTGAGAAACT+TGG | - | chr8_2:21860121-21860140 | Msa1239830:intron | 30.0% | |
!!! | TTGAGAAACTTGGCTTTTTT+TGG | - | chr8_2:21860131-21860150 | Msa1239830:intron | 30.0% |
TCAAACAATATCCAACAATG+TGG | + | chr8_2:21860274-21860293 | None:intergenic | 30.0% | |
!! | TAGTATTTTGTTTGTCAGGT+AGG | - | chr8_2:21860401-21860420 | Msa1239830:intron | 30.0% |
GACATTGACCAATTATTTGA+GGG | + | chr8_2:21860512-21860531 | None:intergenic | 30.0% | |
TGACATTGACCAATTATTTG+AGG | + | chr8_2:21860513-21860532 | None:intergenic | 30.0% | |
!!! | AAAACATTTTGGTGTTGTCA+GGG | - | chr8_2:21860721-21860740 | Msa1239830:intron | 30.0% |
ACTCATTTCATATATGGACT+TGG | + | chr8_2:21861030-21861049 | None:intergenic | 30.0% | |
! | CTTTTACATGGGTCTATTAT+AGG | + | chr8_2:21861517-21861536 | None:intergenic | 30.0% |
CTAAGAAACACTGTTATTAG+AGG | + | chr8_2:21861580-21861599 | None:intergenic | 30.0% | |
!! | AATTGGCTTAATTGCAGTTT+TGG | + | chr8_2:21862112-21862131 | None:intergenic | 30.0% |
!! | TCTAAATTTTTGAACGGACT+TGG | + | chr8_2:21862264-21862283 | None:intergenic | 30.0% |
GCCCAAATTAAAATGATTTG+GGG | - | chr8_2:21862374-21862393 | Msa1239830:intron | 30.0% | |
! | AGTTTGAGTAAGACTTGTTT+GGG | + | chr8_2:21862413-21862432 | None:intergenic | 30.0% |
! | AAGTTTGAGTAAGACTTGTT+TGG | + | chr8_2:21862414-21862433 | None:intergenic | 30.0% |
GTTAAAAAGTTGTCACAAAG+TGG | + | chr8_2:21862651-21862670 | None:intergenic | 30.0% | |
!! | CATCGATTTATTGACAACTT+TGG | + | chr8_2:21862775-21862794 | None:intergenic | 30.0% |
AAGAGAAAAACATGTACAAG+AGG | - | chr8_2:21862821-21862840 | Msa1239830:intron | 30.0% | |
AGAGAAAAACATGTACAAGA+GGG | - | chr8_2:21862822-21862841 | Msa1239830:intron | 30.0% | |
!!! | CGTTTTTTGTTTCCTTTTGA+GGG | + | chr8_2:21862861-21862880 | None:intergenic | 30.0% |
!!! | TCGTTTTTTGTTTCCTTTTG+AGG | + | chr8_2:21862862-21862881 | None:intergenic | 30.0% |
!!! | TTATGGCCACTTTTCTTATT+TGG | + | chr8_2:21862907-21862926 | None:intergenic | 30.0% |
! | TGAGCATAACCTTTTCTTTA+TGG | + | chr8_2:21862924-21862943 | None:intergenic | 30.0% |
!! | GTTATAGAAATTGGCTTTGT+TGG | - | chr8_2:21862974-21862993 | Msa1239830:intron | 30.0% |
TGAATTGCTTCGACAAATAA+GGG | + | chr8_2:21863066-21863085 | None:intergenic | 30.0% | |
TTGAATTGCTTCGACAAATA+AGG | + | chr8_2:21863067-21863086 | None:intergenic | 30.0% | |
CCATATAGCTACTAAGAAAA+CGG | + | chr8_2:21863130-21863149 | None:intergenic | 30.0% | |
! | CGTTTTCTTAGTAGCTATAT+GGG | - | chr8_2:21863128-21863147 | Msa1239830:intron | 30.0% |
! | TGTATCTTTTCAATGTCGTT+GGG | + | chr8_2:21863173-21863192 | None:intergenic | 30.0% |
! | TTGTATCTTTTCAATGTCGT+TGG | + | chr8_2:21863174-21863193 | None:intergenic | 30.0% |
CGACATTGAAAAGATACAAA+AGG | - | chr8_2:21863175-21863194 | Msa1239830:intron | 30.0% | |
TACAAAAGGAAATATACGAG+TGG | - | chr8_2:21863189-21863208 | Msa1239830:intron | 30.0% | |
TAGGTCACATAATATGAACA+TGG | + | chr8_2:21863279-21863298 | None:intergenic | 30.0% | |
TGCTTGAGCTTCATAACAAA+TGG | + | chr8_2:21858717-21858736 | None:intergenic | 35.0% | |
! | TTTGTTATGAAGCTCAAGCA+AGG | - | chr8_2:21858717-21858736 | Msa1239830:CDS | 35.0% |
TATCTTTACTCTTCAGCAAC+AGG | - | chr8_2:21858772-21858791 | Msa1239830:CDS | 35.0% | |
! | ATTATAGCTAGCTAGCTTCT+AGG | - | chr8_2:21858966-21858985 | Msa1239830:intron | 35.0% |
!!! | GTAATTTTTAGCGGTATGCA+AGG | - | chr8_2:21859223-21859242 | Msa1239830:intron | 35.0% |
ATGATGAGTAATTTACGGAG+CGG | + | chr8_2:21859282-21859301 | None:intergenic | 35.0% | |
AACAAACTTACAATGTGGCT+AGG | + | chr8_2:21859310-21859329 | None:intergenic | 35.0% | |
GATTAAGCCATAAACATCCT+TGG | + | chr8_2:21859335-21859354 | None:intergenic | 35.0% | |
TTCATGCAATGCTAGTAGTA+TGG | - | chr8_2:21859560-21859579 | Msa1239830:intron | 35.0% | |
! | GCTAGTAGTATGGTTTTTCT+TGG | - | chr8_2:21859570-21859589 | Msa1239830:intron | 35.0% |
GAAAGAGGAAAACAAGGTAT+AGG | - | chr8_2:21859658-21859677 | Msa1239830:intron | 35.0% | |
!!! | TCATTGGTCTTAGTTTTTGC+TGG | - | chr8_2:21859830-21859849 | Msa1239830:intron | 35.0% |
!! | AAATGGTCGGTTAGTTTCTT+GGG | - | chr8_2:21859862-21859881 | Msa1239830:intron | 35.0% |
!!! | TGGGTTTTGGATATTGTGAT+AGG | - | chr8_2:21859881-21859900 | Msa1239830:intron | 35.0% |
TGGGATTGCTATATAGTGAT+AGG | + | chr8_2:21859978-21859997 | None:intergenic | 35.0% | |
AAGTTAAGACACCATCAAAC+CGG | - | chr8_2:21860043-21860062 | Msa1239830:intron | 35.0% | |
AACGTTGAGATTAACTAGCT+AGG | - | chr8_2:21860213-21860232 | Msa1239830:intron | 35.0% | |
CTTTATGTTGACCACATTGT+TGG | - | chr8_2:21860260-21860279 | Msa1239830:intron | 35.0% | |
ATAGGGATTACAAACACGTA+GGG | + | chr8_2:21860488-21860507 | None:intergenic | 35.0% | |
! | ACCAATTATTTGAGGGCATA+GGG | + | chr8_2:21860505-21860524 | None:intergenic | 35.0% |
!! | GAAGGAACCAAAGTCATTTT+GGG | + | chr8_2:21860635-21860654 | None:intergenic | 35.0% |
! | TGAAGGAACCAAAGTCATTT+TGG | + | chr8_2:21860636-21860655 | None:intergenic | 35.0% |
! | CTTTGAAAACTAACATCTCG+AGG | + | chr8_2:21860660-21860679 | None:intergenic | 35.0% |
!!! | CAAAACATTTTGGTGTTGTC+AGG | - | chr8_2:21860720-21860739 | Msa1239830:intron | 35.0% |
!!! | AAACATTTTGGTGTTGTCAG+GGG | - | chr8_2:21860722-21860741 | Msa1239830:intron | 35.0% |
GTGCTAATTTCAAGAACTCA+GGG | + | chr8_2:21860784-21860803 | None:intergenic | 35.0% | |
TTGGTGCAACAACAAAATGA+GGG | + | chr8_2:21860837-21860856 | None:intergenic | 35.0% | |
AGATGAGTAGGTCTTTCTTT+GGG | + | chr8_2:21860867-21860886 | None:intergenic | 35.0% | |
! | CATATATGGACTTGGTACAA+TGG | + | chr8_2:21861022-21861041 | None:intergenic | 35.0% |
AGATGACTAAAAATGAGGGA+TGG | + | chr8_2:21861085-21861104 | None:intergenic | 35.0% | |
! | AAGTTCTCCCTAAGAGTTTT+AGG | - | chr8_2:21861275-21861294 | Msa1239830:intron | 35.0% |
! | AGTTCTCCCTAAGAGTTTTA+GGG | - | chr8_2:21861276-21861295 | Msa1239830:intron | 35.0% |
AGAAACACTGTTATTAGAGG+TGG | + | chr8_2:21861577-21861596 | None:intergenic | 35.0% | |
CTAACGACTGCTCTTAATTA+GGG | - | chr8_2:21861668-21861687 | Msa1239830:intron | 35.0% | |
TAGCCGTTGGTATAAACTAA+AGG | + | chr8_2:21862185-21862204 | None:intergenic | 35.0% | |
TTTACATAGACTTTAGCCGT+TGG | + | chr8_2:21862198-21862217 | None:intergenic | 35.0% | |
TATAACTGTCAAAATGGCAG+AGG | - | chr8_2:21862229-21862248 | Msa1239830:intron | 35.0% | |
!! | ATTTTTGAACGGACTTGGTT+GGG | + | chr8_2:21862259-21862278 | None:intergenic | 35.0% |
!! | AATTTTTGAACGGACTTGGT+TGG | + | chr8_2:21862260-21862279 | None:intergenic | 35.0% |
TGAACACAAGTTATAAGAGC+AGG | - | chr8_2:21862448-21862467 | Msa1239830:intron | 35.0% | |
GAACACAAGTTATAAGAGCA+GGG | - | chr8_2:21862449-21862468 | Msa1239830:intron | 35.0% | |
AACACAAGTTATAAGAGCAG+GGG | - | chr8_2:21862450-21862469 | Msa1239830:intron | 35.0% | |
! | GTATTTTCGGCAAAACAGTT+TGG | + | chr8_2:21862570-21862589 | None:intergenic | 35.0% |
TCATGTGCATATGAGAGAAA+AGG | + | chr8_2:21862676-21862695 | None:intergenic | 35.0% | |
GAGAAAAACATGTACAAGAG+GGG | - | chr8_2:21862823-21862842 | Msa1239830:intron | 35.0% | |
!! | TTGTTTCCTTTTGAGGGTTT+TGG | + | chr8_2:21862855-21862874 | None:intergenic | 35.0% |
GAAAAGTGGCCATAAAGAAA+AGG | - | chr8_2:21862912-21862931 | Msa1239830:intron | 35.0% | |
TTACGAAGAAGCAGAAGAAA+CGG | + | chr8_2:21863001-21863020 | None:intergenic | 35.0% | |
TTCTGCTTCTTCGTAAGATA+AGG | - | chr8_2:21863005-21863024 | Msa1239830:intron | 35.0% | |
TTCGTAAGATAAGGCGTAAA+CGG | - | chr8_2:21863014-21863033 | Msa1239830:intron | 35.0% | |
TATAGCTACTAAGAAAACGG+CGG | + | chr8_2:21863127-21863146 | None:intergenic | 35.0% | |
! | CCGTTTTCTTAGTAGCTATA+TGG | - | chr8_2:21863127-21863146 | Msa1239830:intron | 35.0% |
! | GTATCTTTTCAATGTCGTTG+GGG | + | chr8_2:21863172-21863191 | None:intergenic | 35.0% |
GAAGACAAGTCATATGTATC+TGG | + | chr8_2:21863471-21863490 | None:intergenic | 35.0% | |
ACATCATCCACTAGCAATAA+TGG | - | chr8_2:21863570-21863589 | Msa1239830:CDS | 35.0% | |
! | AGAGAGCTTTTGCATAGATA+TGG | - | chr8_2:21863615-21863634 | Msa1239830:CDS | 35.0% |
TGGAAAGAGAATGAGATGAT+GGG | + | chr8_2:21863671-21863690 | None:intergenic | 35.0% | |
TTGGAAAGAGAATGAGATGA+TGG | + | chr8_2:21863672-21863691 | None:intergenic | 35.0% | |
AGTATAAACTCCGGTTGTAG+CGG | - | chr8_2:21858467-21858486 | Msa1239830:CDS | 40.0% | |
! | TTTGAGAAGGAAGTGTATCC+CGG | - | chr8_2:21858553-21858572 | Msa1239830:CDS | 40.0% |
TAAGGCGCAAAAATACATCC+CGG | + | chr8_2:21858575-21858594 | None:intergenic | 40.0% | |
! | TTTTGCGCCTTACTTCGATT+CGG | - | chr8_2:21858583-21858602 | Msa1239830:CDS | 40.0% |
ATGAGCAACACAACCAAAGA+CGG | + | chr8_2:21858753-21858772 | None:intergenic | 40.0% | |
CTGGAAAAGCTTAGAGAGAA+AGG | + | chr8_2:21858944-21858963 | None:intergenic | 40.0% | |
AGCTAGCTAGCTATAATAGC+TGG | + | chr8_2:21858963-21858982 | None:intergenic | 40.0% | |
TACGGAGCGGAATGATAAAA+AGG | + | chr8_2:21859269-21859288 | None:intergenic | 40.0% | |
AAACTTACAATGTGGCTAGG+TGG | + | chr8_2:21859307-21859326 | None:intergenic | 40.0% | |
!! | TGGGTGGGTATCTTTGATTT+TGG | + | chr8_2:21859357-21859376 | None:intergenic | 40.0% |
TGCTTTATGCCTTCCAAAAG+AGG | - | chr8_2:21859607-21859626 | Msa1239830:intron | 40.0% | |
! | ACCTTTGTTCCTCTTTTGGA+AGG | + | chr8_2:21859619-21859638 | None:intergenic | 40.0% |
TCCAAAAGAGGAACAAAGGT+TGG | - | chr8_2:21859619-21859638 | Msa1239830:intron | 40.0% | |
CCAAAAGAGGAACAAAGGTT+GGG | - | chr8_2:21859620-21859639 | Msa1239830:intron | 40.0% | |
! | AAGGTTGGGTTTGAGTCTTT+TGG | - | chr8_2:21859634-21859653 | Msa1239830:intron | 40.0% |
! | AGGTTGGGTTTGAGTCTTTT+GGG | - | chr8_2:21859635-21859654 | Msa1239830:intron | 40.0% |
!! | TTTGAGTCTTTTGGGGAAAG+AGG | - | chr8_2:21859643-21859662 | Msa1239830:intron | 40.0% |
TTTGGGGAAAGAGGAAAACA+AGG | - | chr8_2:21859652-21859671 | Msa1239830:intron | 40.0% | |
TTAAGAAGTGATATGGTCGG+CGG | - | chr8_2:21859752-21859771 | Msa1239830:intron | 40.0% | |
!!! | TTTGCTGGTTTTAGGGGAAA+TGG | - | chr8_2:21859845-21859864 | Msa1239830:intron | 40.0% |
!! | GAAATGGTCGGTTAGTTTCT+TGG | - | chr8_2:21859861-21859880 | Msa1239830:intron | 40.0% |
!!! | TCGGTTAGTTTCTTGGGTTT+TGG | - | chr8_2:21859868-21859887 | Msa1239830:intron | 40.0% |
ACATAAAGCAGGAAAGGCTA+TGG | + | chr8_2:21860248-21860267 | None:intergenic | 40.0% | |
TGGTCAACATAAAGCAGGAA+AGG | + | chr8_2:21860254-21860273 | None:intergenic | 40.0% | |
CAATGTGGTCAACATAAAGC+AGG | + | chr8_2:21860259-21860278 | None:intergenic | 40.0% | |
CATAGGGATTACAAACACGT+AGG | + | chr8_2:21860489-21860508 | None:intergenic | 40.0% | |
TCCCTATGCCCTCAAATAAT+TGG | - | chr8_2:21860501-21860520 | Msa1239830:intron | 40.0% | |
! | GACCAATTATTTGAGGGCAT+AGG | + | chr8_2:21860506-21860525 | None:intergenic | 40.0% |
AACTAACATCTCGAGGTTGA+AGG | + | chr8_2:21860653-21860672 | None:intergenic | 40.0% | |
GGTGCTAATTTCAAGAACTC+AGG | + | chr8_2:21860785-21860804 | None:intergenic | 40.0% | |
! | CTTGGTGCAACAACAAAATG+AGG | + | chr8_2:21860838-21860857 | None:intergenic | 40.0% |
TCTTTCTTTGGGTCAAGACT+TGG | + | chr8_2:21860856-21860875 | None:intergenic | 40.0% | |
CAGATGAGTAGGTCTTTCTT+TGG | + | chr8_2:21860868-21860887 | None:intergenic | 40.0% | |
GGTTAATACGGACATTTCGA+GGG | - | chr8_2:21861237-21861256 | Msa1239830:intron | 40.0% | |
CAACAGCCCTAAAACTCTTA+GGG | + | chr8_2:21861285-21861304 | None:intergenic | 40.0% | |
!! | ACAAAAGCGCTTAGATGAGA+CGG | + | chr8_2:21861364-21861383 | None:intergenic | 40.0% |
GCTAACGACTGCTCTTAATT+AGG | - | chr8_2:21861667-21861686 | Msa1239830:intron | 40.0% | |
ATAAAAAATAGGACCTGGGC+TGG | + | chr8_2:21862512-21862531 | None:intergenic | 40.0% | |
! | AACTCACGCATGGGTATTTT+CGG | + | chr8_2:21862583-21862602 | None:intergenic | 40.0% |
ACCAAACCAAAACCCTCAAA+AGG | - | chr8_2:21862846-21862865 | Msa1239830:intron | 40.0% | |
!!! | TCCTTTTGAGGGTTTTGGTT+TGG | + | chr8_2:21862850-21862869 | None:intergenic | 40.0% |
TTTCTATAACACTCGCTCCA+CGG | + | chr8_2:21862964-21862983 | None:intergenic | 40.0% | |
GGAGCGAGTGTTATAGAAAT+TGG | - | chr8_2:21862965-21862984 | Msa1239830:intron | 40.0% | |
TACGAAGAAGCAGAAGAAAC+GGG | + | chr8_2:21863000-21863019 | None:intergenic | 40.0% | |
TTAGTAGCTATATGGGTCTC+CGG | - | chr8_2:21863135-21863154 | Msa1239830:intron | 40.0% | |
GTACTTCATATGTAGCTAGG+TGG | + | chr8_2:21863368-21863387 | None:intergenic | 40.0% | |
! | GAGGTACTTCATATGTAGCT+AGG | + | chr8_2:21863371-21863390 | None:intergenic | 40.0% |
CAAGTCATATGTATCTGGCA+TGG | + | chr8_2:21863466-21863485 | None:intergenic | 40.0% | |
AAGTACCCCAAACTTCATCA+TGG | - | chr8_2:21863499-21863518 | Msa1239830:CDS | 40.0% | |
AGTACCCCAAACTTCATCAT+GGG | - | chr8_2:21863500-21863519 | Msa1239830:CDS | 40.0% | |
ATGACCCATGATGAAGTTTG+GGG | + | chr8_2:21863507-21863526 | None:intergenic | 40.0% | |
CATGACCCATGATGAAGTTT+GGG | + | chr8_2:21863508-21863527 | None:intergenic | 40.0% | |
! | ATGTGCCACTACCCAAATAT+TGG | + | chr8_2:21863554-21863573 | None:intergenic | 40.0% |
TCATCCACTAGCAATAATGG+TGG | - | chr8_2:21863573-21863592 | Msa1239830:CDS | 40.0% | |
ATCACCACCATTATTGCTAG+TGG | + | chr8_2:21863580-21863599 | None:intergenic | 40.0% | |
GGAAAGAGAATGAGATGATG+GGG | + | chr8_2:21863670-21863689 | None:intergenic | 40.0% | |
AAAACTTGCACGCACCACAA+GGG | + | chr8_2:21858535-21858554 | None:intergenic | 45.0% | |
AAAAACTTGCACGCACCACA+AGG | + | chr8_2:21858536-21858555 | None:intergenic | 45.0% | |
!! | GTGCGTGCAAGTTTTTGAGA+AGG | - | chr8_2:21858540-21858559 | Msa1239830:CDS | 45.0% |
! | TTGAGAAGGAAGTGTATCCC+GGG | - | chr8_2:21858554-21858573 | Msa1239830:CDS | 45.0% |
AAGGCGCAAAAATACATCCC+GGG | + | chr8_2:21858574-21858593 | None:intergenic | 45.0% | |
! | CAGCGGTTCACAAGGTTTTT+GGG | - | chr8_2:21858627-21858646 | Msa1239830:CDS | 45.0% |
! | AGCGGTTCACAAGGTTTTTG+GGG | - | chr8_2:21858628-21858647 | Msa1239830:CDS | 45.0% |
TGAGCAACACAACCAAAGAC+GGG | + | chr8_2:21858752-21858771 | None:intergenic | 45.0% | |
GCCTTCCAAAAGAGGAACAA+AGG | - | chr8_2:21859615-21859634 | Msa1239830:intron | 45.0% | |
! | CCCAACCTTTGTTCCTCTTT+TGG | + | chr8_2:21859623-21859642 | None:intergenic | 45.0% |
! | GGTTGGGTTTGAGTCTTTTG+GGG | - | chr8_2:21859636-21859655 | Msa1239830:intron | 45.0% |
TTTGTTCCATGGCTCTTTGC+AGG | + | chr8_2:21859685-21859704 | None:intergenic | 45.0% | |
TGCAAAGAGCCATGGAACAA+AGG | - | chr8_2:21859684-21859703 | Msa1239830:intron | 45.0% | |
GCAAAGAGCCATGGAACAAA+GGG | - | chr8_2:21859685-21859704 | Msa1239830:intron | 45.0% | |
CAAAGAGCCATGGAACAAAG+GGG | - | chr8_2:21859686-21859705 | Msa1239830:intron | 45.0% | |
AAACTGTCCCCTTTGTTCCA+TGG | + | chr8_2:21859696-21859715 | None:intergenic | 45.0% | |
TCGGCGGTTACACATATGTA+TGG | - | chr8_2:21859768-21859787 | Msa1239830:intron | 45.0% | |
!!! | CTGGTTTTAGGGGAAATGGT+CGG | - | chr8_2:21859849-21859868 | Msa1239830:intron | 45.0% |
! | CACAATTTAGGGCAGATTGC+CGG | + | chr8_2:21860065-21860084 | None:intergenic | 45.0% |
! | GGGTGTTTGAGTTCGATACT+CGG | - | chr8_2:21860462-21860481 | Msa1239830:intron | 45.0% |
CGGTTAATACGGACATTTCG+AGG | - | chr8_2:21861236-21861255 | Msa1239830:intron | 45.0% | |
GCAACAGCCCTAAAACTCTT+AGG | + | chr8_2:21861286-21861305 | None:intergenic | 45.0% | |
TTAGGGCTGTTGCATTCCTA+AGG | - | chr8_2:21861293-21861312 | Msa1239830:intron | 45.0% | |
TGGATTCGAACCCAAGACTT+TGG | - | chr8_2:21861317-21861336 | Msa1239830:intron | 45.0% | |
! | AAGGGTCTGCGCTTTTACAT+GGG | + | chr8_2:21861528-21861547 | None:intergenic | 45.0% |
! | AAAGGGTCTGCGCTTTTACA+TGG | + | chr8_2:21861529-21861548 | None:intergenic | 45.0% |
ACAAGTTATAAGAGCAGGGG+CGG | - | chr8_2:21862453-21862472 | Msa1239830:intron | 45.0% | |
TTCTATAACACTCGCTCCAC+GGG | + | chr8_2:21862963-21862982 | None:intergenic | 45.0% | |
TCAATGTCCTTCTGCATCAC+CGG | - | chr8_2:21863083-21863102 | Msa1239830:intron | 45.0% | |
! | CTTTTCAATGTCGTTGGGGT+GGG | + | chr8_2:21863168-21863187 | None:intergenic | 45.0% |
! | TCTTTTCAATGTCGTTGGGG+TGG | + | chr8_2:21863169-21863188 | None:intergenic | 45.0% |
GCAGAACTCTCCTACTTACA+AGG | - | chr8_2:21863342-21863361 | Msa1239830:intron | 45.0% | |
TATCTGGCATGGCTGAAGAA+GGG | + | chr8_2:21863455-21863474 | None:intergenic | 45.0% | |
GCATGACCCATGATGAAGTT+TGG | + | chr8_2:21863509-21863528 | None:intergenic | 45.0% | |
AAATATTGGCGGGGCTCATT+GGG | + | chr8_2:21863540-21863559 | None:intergenic | 45.0% | |
AATGAGCCCCGCCAATATTT+GGG | - | chr8_2:21863540-21863559 | Msa1239830:CDS | 45.0% | |
TGCCACTACCCAAATATTGG+CGG | + | chr8_2:21863551-21863570 | None:intergenic | 45.0% | |
! | TGGTGGTGATCTTCAAGCAT+TGG | - | chr8_2:21863590-21863609 | Msa1239830:CDS | 45.0% |
!!! | GTTAATAAATAATTTTTTTA+AGG | + | chr8_2:21861429-21861448 | None:intergenic | 5.0% |
!!! | AAAAAAGAAATATTAATTTT+AGG | + | chr8_2:21863298-21863317 | None:intergenic | 5.0% |
CCTTGCTCCGAATCGAAGTA+AGG | + | chr8_2:21858593-21858612 | None:intergenic | 50.0% | |
!! | CCTTACTTCGATTCGGAGCA+AGG | - | chr8_2:21858590-21858609 | Msa1239830:CDS | 50.0% |
ACATTTCGCAGCGGTTCACA+AGG | - | chr8_2:21858619-21858638 | Msa1239830:CDS | 50.0% | |
! | GCAGCGGTTCACAAGGTTTT+TGG | - | chr8_2:21858626-21858645 | Msa1239830:CDS | 50.0% |
GCATCAAGACGCTTGTGTAC+CGG | + | chr8_2:21858686-21858705 | None:intergenic | 50.0% | |
GGTACACAAGCGTCTTGATG+CGG | - | chr8_2:21858685-21858704 | Msa1239830:CDS | 50.0% | |
AGGTTGAGAGATCCCGTCTT+TGG | - | chr8_2:21858737-21858756 | Msa1239830:CDS | 50.0% | |
ATAGGTCCTGCAAAGAGCCA+TGG | - | chr8_2:21859676-21859695 | Msa1239830:intron | 50.0% | |
CGGCAATCTGCCCTAAATTG+TGG | - | chr8_2:21860063-21860082 | Msa1239830:intron | 50.0% | |
!!! | CATTTTGGTGTTGTCAGGGG+CGG | - | chr8_2:21860725-21860744 | Msa1239830:intron | 50.0% |
TTCAAGAACTCAGGGTGTGC+AGG | + | chr8_2:21860776-21860795 | None:intergenic | 50.0% | |
CAAGGGCAACACAGATGAGT+AGG | + | chr8_2:21860879-21860898 | None:intergenic | 50.0% | |
GACATTTCGAGGGACCCAAA+TGG | - | chr8_2:21861247-21861266 | Msa1239830:intron | 50.0% | |
TTTCGAGGGACCCAAATGGA+CGG | - | chr8_2:21861251-21861270 | Msa1239830:intron | 50.0% | |
GGAGAACTTGCCGTCCATTT+GGG | + | chr8_2:21861264-21861283 | None:intergenic | 50.0% | |
TTGGGTTCGAATCCAGCCTT+AGG | + | chr8_2:21861312-21861331 | None:intergenic | 50.0% | |
AGCGCTTAGATGAGACGGAA+CGG | + | chr8_2:21861359-21861378 | None:intergenic | 50.0% | |
! | GTTCGAGCGAAAAGTGCAGA+AGG | + | chr8_2:21862548-21862567 | None:intergenic | 50.0% |
GCGTGAGTTAACTCACGCAT+GGG | + | chr8_2:21862592-21862611 | None:intergenic | 50.0% | |
CATGCGTGAGTTAACTCACG+CGG | - | chr8_2:21862591-21862610 | Msa1239830:intron | 50.0% | |
ATGCGTGAGTTAACTCACGC+GGG | - | chr8_2:21862592-21862611 | Msa1239830:intron | 50.0% | |
AGGTTATGCTCAACCACCCT+TGG | - | chr8_2:21862932-21862951 | Msa1239830:intron | 50.0% | |
GGTTATGCTCAACCACCCTT+GGG | - | chr8_2:21862933-21862952 | Msa1239830:intron | 50.0% | |
CAATGTCCTTCTGCATCACC+GGG | - | chr8_2:21863084-21863103 | Msa1239830:intron | 50.0% | |
!! | AGCTAGGTGGCCTTGTAAGT+AGG | + | chr8_2:21863355-21863374 | None:intergenic | 50.0% |
!! | ATTGGAAGTGCTTGTGGTGG+AGG | + | chr8_2:21863405-21863424 | None:intergenic | 50.0% |
TCCACCACAAGCACTTCCAA+TGG | - | chr8_2:21863404-21863423 | Msa1239830:CDS | 50.0% | |
!! | ACCATTGGAAGTGCTTGTGG+TGG | + | chr8_2:21863408-21863427 | None:intergenic | 50.0% |
!! | GAGACCATTGGAAGTGCTTG+TGG | + | chr8_2:21863411-21863430 | None:intergenic | 50.0% |
! | AGGTTGGCTAGTGAGACCAT+TGG | + | chr8_2:21863423-21863442 | None:intergenic | 50.0% |
TGGCTGAAGAAGGGGCTAAT+GGG | + | chr8_2:21863446-21863465 | None:intergenic | 50.0% | |
ATGGCTGAAGAAGGGGCTAA+TGG | + | chr8_2:21863447-21863466 | None:intergenic | 50.0% | |
ATCTGGCATGGCTGAAGAAG+GGG | + | chr8_2:21863454-21863473 | None:intergenic | 50.0% | |
GTATCTGGCATGGCTGAAGA+AGG | + | chr8_2:21863456-21863475 | None:intergenic | 50.0% | |
CAAATATTGGCGGGGCTCAT+TGG | + | chr8_2:21863541-21863560 | None:intergenic | 50.0% | |
CAATGAGCCCCGCCAATATT+TGG | - | chr8_2:21863539-21863558 | Msa1239830:CDS | 50.0% | |
CCACTACCCAAATATTGGCG+GGG | + | chr8_2:21863549-21863568 | None:intergenic | 50.0% | |
GCCACTACCCAAATATTGGC+GGG | + | chr8_2:21863550-21863569 | None:intergenic | 50.0% | |
GCATCAGAGCATGCAACATG+AGG | + | chr8_2:21863648-21863667 | None:intergenic | 50.0% | |
AACTCCGGTTGTAGCGGTAG+TGG | - | chr8_2:21858473-21858492 | Msa1239830:CDS | 55.0% | |
GCAACCACTACCGCTACAAC+CGG | + | chr8_2:21858480-21858499 | None:intergenic | 55.0% | |
! | TGTAGCGGTAGTGGTTGCAG+TGG | - | chr8_2:21858482-21858501 | Msa1239830:CDS | 55.0% |
!! | AGTGGTGGTGGTGGAAACAG+TGG | - | chr8_2:21858500-21858519 | Msa1239830:CDS | 55.0% |
GGTGGAAACAGTGGTGCTTG+TGG | - | chr8_2:21858509-21858528 | Msa1239830:CDS | 55.0% | |
AGGCGCTTCACATTTCGCAG+CGG | - | chr8_2:21858610-21858629 | Msa1239830:CDS | 55.0% | |
!! | AGGGCAGATTGCCGGTTTGA+TGG | + | chr8_2:21860057-21860076 | None:intergenic | 55.0% |
CATCTGTGTTGCCCTTGACG+TGG | - | chr8_2:21860882-21860901 | Msa1239830:intron | 55.0% | |
CAACTCAAGGGCCACGTCAA+GGG | + | chr8_2:21860896-21860915 | None:intergenic | 55.0% | |
ACAACTCAAGGGCCACGTCA+AGG | + | chr8_2:21860897-21860916 | None:intergenic | 55.0% | |
GGGAGAACTTGCCGTCCATT+TGG | + | chr8_2:21861265-21861284 | None:intergenic | 55.0% | |
GGCTGTTGCATTCCTAAGGC+TGG | - | chr8_2:21861297-21861316 | Msa1239830:intron | 55.0% | |
GCGCTTAGATGAGACGGAAC+GGG | + | chr8_2:21861358-21861377 | None:intergenic | 55.0% | |
AAATTTGCACCCCCTGCCTC+AGG | - | chr8_2:21861458-21861477 | Msa1239830:intron | 55.0% | |
AATTTGCACCCCCTGCCTCA+GGG | - | chr8_2:21861459-21861478 | Msa1239830:intron | 55.0% | |
!! | ACGCCACTGGGTGTTGTTCA+AGG | - | chr8_2:21861490-21861509 | Msa1239830:intron | 55.0% |
GGACCTTGAACAACACCCAG+TGG | + | chr8_2:21861496-21861515 | None:intergenic | 55.0% | |
!! | AAATAGGACCTGGGCTGGTG+TGG | + | chr8_2:21862507-21862526 | None:intergenic | 55.0% |
CGCGTGAGTTAACTCACGCA+TGG | + | chr8_2:21862593-21862612 | None:intergenic | 55.0% | |
! | AGTGCTTGTGGTGGAGGTGT+TGG | + | chr8_2:21863399-21863418 | None:intergenic | 55.0% |
AGAAGGGGCTAATGGGAGGT+TGG | + | chr8_2:21863439-21863458 | None:intergenic | 55.0% | |
CTGAAGAAGGGGCTAATGGG+AGG | + | chr8_2:21863443-21863462 | None:intergenic | 55.0% | |
CCCCGCCAATATTTGGGTAG+TGG | - | chr8_2:21863546-21863565 | Msa1239830:CDS | 55.0% | |
! | AGCGGTAGTGGTTGCAGTGG+TGG | - | chr8_2:21858485-21858504 | Msa1239830:CDS | 60.0% |
! | GGTAGTGGTTGCAGTGGTGG+TGG | - | chr8_2:21858488-21858507 | Msa1239830:CDS | 60.0% |
!! | AGTGGTTGCAGTGGTGGTGG+TGG | - | chr8_2:21858491-21858510 | Msa1239830:CDS | 60.0% |
AGTGGTGCTTGTGGCCCTTG+TGG | - | chr8_2:21858518-21858537 | Msa1239830:CDS | 60.0% | |
TGCTCACCCTCACATGCACC+TGG | + | chr8_2:21860753-21860772 | None:intergenic | 60.0% | |
TATCCAGGACCCTGAGGCAG+GGG | + | chr8_2:21861471-21861490 | None:intergenic | 60.0% | |
GTATCCAGGACCCTGAGGCA+GGG | + | chr8_2:21861472-21861491 | None:intergenic | 60.0% | |
AGGGTCCTGGATACGCCACT+GGG | - | chr8_2:21861478-21861497 | Msa1239830:intron | 60.0% | |
CAACACCCAGTGGCGTATCC+AGG | + | chr8_2:21861486-21861505 | None:intergenic | 60.0% | |
CGTTGGGGTGGGAAATGTGC+CGG | + | chr8_2:21863157-21863176 | None:intergenic | 60.0% | |
!! | GGTGGAGGTGTTGGTGGTTG+AGG | + | chr8_2:21863390-21863409 | None:intergenic | 60.0% |
!! | GCTTGTGGTGGAGGTGTTGG+TGG | + | chr8_2:21863396-21863415 | None:intergenic | 60.0% |
GCGGAGCCAGGTGCATGTGA+GGG | - | chr8_2:21860744-21860763 | Msa1239830:intron | 65.0% | |
ATCCAGGACCCTGAGGCAGG+GGG | + | chr8_2:21861470-21861489 | None:intergenic | 65.0% | |
CGTATCCAGGACCCTGAGGC+AGG | + | chr8_2:21861473-21861492 | None:intergenic | 65.0% | |
GTGGCGTATCCAGGACCCTG+AGG | + | chr8_2:21861477-21861496 | None:intergenic | 65.0% | |
CAGGGTCCTGGATACGCCAC+TGG | - | chr8_2:21861477-21861496 | Msa1239830:intron | 65.0% | |
GGCAATAGCCACACCAGCCC+AGG | - | chr8_2:21862496-21862515 | Msa1239830:intron | 65.0% | |
ACCACCCTTGGGTTCACCCG+TGG | - | chr8_2:21862944-21862963 | Msa1239830:intron | 65.0% | |
TCCACGGGTGAACCCAAGGG+TGG | + | chr8_2:21862948-21862967 | None:intergenic | 65.0% | |
CGCTCCACGGGTGAACCCAA+GGG | + | chr8_2:21862951-21862970 | None:intergenic | 65.0% | |
TCGCTCCACGGGTGAACCCA+AGG | + | chr8_2:21862952-21862971 | None:intergenic | 65.0% | |
CCTTCTGCATCACCGGGCAG+CGG | - | chr8_2:21863090-21863109 | Msa1239830:intron | 65.0% | |
GTGTTGTCAGGGGCGGAGCC+AGG | - | chr8_2:21860732-21860751 | Msa1239830:intron | 70.0% | |
GGCGGAGCCAGGTGCATGTG+AGG | - | chr8_2:21860743-21860762 | Msa1239830:intron | 70.0% | |
AGCAGGGGCGGACCTGAGCA+GGG | - | chr8_2:21862465-21862484 | Msa1239830:intron | 70.0% | |
GACCTGAGCAGGGCAGGGTG+TGG | - | chr8_2:21862475-21862494 | Msa1239830:intron | 70.0% | |
TGCCACACCCTGCCCTGCTC+AGG | + | chr8_2:21862480-21862499 | None:intergenic | 70.0% | |
CCGCTGCCCGGTGATGCAGA+AGG | + | chr8_2:21863093-21863112 | None:intergenic | 70.0% | |
GTTCCTCCTGCACCGCTGCC+CGG | + | chr8_2:21863105-21863124 | None:intergenic | 70.0% | |
CACCCCCTGCCTCAGGGTCC+TGG | - | chr8_2:21861465-21861484 | Msa1239830:intron | 75.0% | |
GAGCAGGGGCGGACCTGAGC+AGG | - | chr8_2:21862464-21862483 | Msa1239830:intron | 75.0% | |
GGGCGGACCTGAGCAGGGCA+GGG | - | chr8_2:21862470-21862489 | Msa1239830:intron | 75.0% | |
GCATCACCGGGCAGCGGTGC+AGG | - | chr8_2:21863096-21863115 | Msa1239830:intron | 75.0% | |
TCACCGGGCAGCGGTGCAGG+AGG | - | chr8_2:21863099-21863118 | Msa1239830:intron | 75.0% | |
! | GGGGCGGACCTGAGCAGGGC+AGG | - | chr8_2:21862469-21862488 | Msa1239830:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 21858464 | 21863695 | 21858464 | ID=Msa1239830;Name=Msa1239830 |
chr8_2 | mRNA | 21858464 | 21863695 | 21858464 | ID=Msa1239830-mRNA-1;Parent=Msa1239830;Name=Msa1239830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|232 |
chr8_2 | exon | 21863366 | 21863695 | 21863366 | ID=Msa1239830-mRNA-1:exon:7817;Parent=Msa1239830-mRNA-1 |
chr8_2 | exon | 21858464 | 21858832 | 21858464 | ID=Msa1239830-mRNA-1:exon:7816;Parent=Msa1239830-mRNA-1 |
chr8_2 | CDS | 21863366 | 21863695 | 21863366 | ID=Msa1239830-mRNA-1:cds;Parent=Msa1239830-mRNA-1 |
chr8_2 | CDS | 21858464 | 21858832 | 21858464 | ID=Msa1239830-mRNA-1:cds;Parent=Msa1239830-mRNA-1 |
Gene Sequence |
Protein sequence |