Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281130 | sp|O81323|LBD30_ARATH | 62.105 | 190 | 63 | 2 | 27 | 211 | 20 | 205 | 1.70e-75 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281130 | A0A072TNF8 | 96.567 | 233 | 6 | 2 | 1 | 232 | 1 | 232 | 1.97e-161 | 455 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1281130 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa1281130 | -0.809158 | 2.172433e-50 | -8.615850e-47 |
| Msa0004590 | Msa1281130 | 0.812945 | 3.283627e-51 | -8.615850e-47 |
| Msa0012780 | Msa1281130 | 0.805064 | 1.598814e-49 | -8.615850e-47 |
| Msa0012790 | Msa1281130 | 0.817061 | 4.007882e-52 | -8.615850e-47 |
| Msa0012820 | Msa1281130 | 0.828833 | 7.214526e-55 | -8.615850e-47 |
| Msa0048950 | Msa1281130 | 0.805296 | 1.429441e-49 | -8.615850e-47 |
| Msa0059880 | Msa1281130 | 0.808635 | 2.810918e-50 | -8.615850e-47 |
| Msa0061590 | Msa1281130 | 0.824366 | 8.391921e-54 | -8.615850e-47 |
| Msa0061600 | Msa1281130 | 0.808057 | 3.733401e-50 | -8.615850e-47 |
| Msa0089010 | Msa1281130 | -0.805046 | 1.612306e-49 | -8.615850e-47 |
| Msa0106110 | Msa1281130 | 0.809449 | 1.882172e-50 | -8.615850e-47 |
| Msa0106130 | Msa1281130 | 0.819588 | 1.073179e-52 | -8.615850e-47 |
| Msa0623980 | Msa1281130 | 0.810488 | 1.124554e-50 | -8.615850e-47 |
| Msa0624930 | Msa1281130 | 0.805333 | 1.404591e-49 | -8.615850e-47 |
| Msa0627050 | Msa1281130 | -0.819201 | 1.315363e-52 | -8.615850e-47 |
| Msa0671400 | Msa1281130 | 0.807065 | 6.063669e-50 | -8.615850e-47 |
| Msa0672780 | Msa1281130 | 0.802467 | 5.533036e-49 | -8.615850e-47 |
| Msa0678620 | Msa1281130 | 0.811817 | 5.791175e-51 | -8.615850e-47 |
| Msa0684720 | Msa1281130 | 0.806780 | 6.964939e-50 | -8.615850e-47 |
| Msa0716700 | Msa1281130 | 0.832579 | 8.720567e-56 | -8.615850e-47 |
| Msa0727480 | Msa1281130 | 0.804703 | 1.902431e-49 | -8.615850e-47 |
| Msa0738410 | Msa1281130 | 0.801998 | 6.909842e-49 | -8.615850e-47 |
| Msa0749150 | Msa1281130 | -0.815839 | 7.524620e-52 | -8.615850e-47 |
| Msa0768720 | Msa1281130 | 0.801378 | 9.263807e-49 | -8.615850e-47 |
| Msa0772420 | Msa1281130 | 0.848132 | 7.448905e-60 | -8.615850e-47 |
| Msa0792880 | Msa1281130 | -0.806880 | 6.635520e-50 | -8.615850e-47 |
| Msa0799170 | Msa1281130 | 0.811394 | 7.155655e-51 | -8.615850e-47 |
| Msa0813030 | Msa1281130 | -0.816965 | 4.213836e-52 | -8.615850e-47 |
| Msa0828900 | Msa1281130 | -0.809994 | 1.437163e-50 | -8.615850e-47 |
| Msa0131460 | Msa1281130 | 0.816735 | 4.743260e-52 | -8.615850e-47 |
| Msa0139460 | Msa1281130 | 0.804077 | 2.568011e-49 | -8.615850e-47 |
| Msa0143280 | Msa1281130 | -0.803108 | 4.079115e-49 | -8.615850e-47 |
| Msa0147670 | Msa1281130 | 0.801766 | 7.712770e-49 | -8.615850e-47 |
| Msa0152640 | Msa1281130 | 0.801877 | 7.319221e-49 | -8.615850e-47 |
| Msa0152660 | Msa1281130 | 0.801561 | 8.496089e-49 | -8.615850e-47 |
| Msa0223880 | Msa1281130 | 0.802314 | 5.950581e-49 | -8.615850e-47 |
| Msa0226410 | Msa1281130 | 0.823776 | 1.154634e-53 | -8.615850e-47 |
| Msa1239830 | Msa1281130 | 0.967653 | 1.416135e-127 | -8.615850e-47 |
| Msa1281130 | Msa1288970 | -0.804475 | 2.122591e-49 | -8.615850e-47 |
| Msa1281130 | Msa1320330 | 0.981380 | 1.900596e-152 | -8.615850e-47 |
| Msa1281130 | Msa1349810 | -0.800248 | 1.575213e-48 | -8.615850e-47 |
| Msa1281130 | Msa1357490 | 0.819982 | 8.722987e-53 | -8.615850e-47 |
| Msa1281130 | Msa1370930 | 0.801518 | 8.670656e-49 | -8.615850e-47 |
| Msa1281130 | Msa1376070 | 0.834417 | 3.033733e-56 | -8.615850e-47 |
| Msa1281130 | Msa1377520 | 0.807576 | 4.724696e-50 | -8.615850e-47 |
| Msa1281130 | Msa1380490 | 0.802371 | 5.791118e-49 | -8.615850e-47 |
| Msa1281130 | Msa1407670 | 0.822136 | 2.784358e-53 | -8.615850e-47 |
| Msa1281130 | Msa1409060 | 0.809295 | 2.030289e-50 | -8.615850e-47 |
| Msa1281130 | Msa1449770 | 0.819138 | 1.359148e-52 | -8.615850e-47 |
| Msa1281130 | Msa1450780 | -0.802072 | 6.673278e-49 | -8.615850e-47 |
| Msa1281130 | Msa1459610 | 0.801232 | 9.924428e-49 | -8.615850e-47 |
| Msa1281130 | Msa1460310 | 0.816058 | 6.725950e-52 | -8.615850e-47 |
| Msa0469550 | Msa1281130 | 0.826419 | 2.741357e-54 | -8.615850e-47 |
| Msa0984000 | Msa1281130 | -0.800414 | 1.457376e-48 | -8.615850e-47 |
| Msa0985700 | Msa1281130 | 0.818188 | 2.233186e-52 | -8.615850e-47 |
| Msa0993450 | Msa1281130 | 0.801468 | 8.876722e-49 | -8.615850e-47 |
| Msa1052030 | Msa1281130 | -0.807478 | 4.957897e-50 | -8.615850e-47 |
| Msa1076830 | Msa1281130 | 0.837237 | 5.850044e-57 | -8.615850e-47 |
| Msa1101300 | Msa1281130 | -0.806829 | 6.801048e-50 | -8.615850e-47 |
| Msa0264940 | Msa1281130 | 0.817141 | 3.845658e-52 | -8.615850e-47 |
| Msa0265060 | Msa1281130 | 0.802341 | 5.873927e-49 | -8.615850e-47 |
| Msa0298270 | Msa1281130 | 0.815909 | 7.259186e-52 | -8.615850e-47 |
| Msa0302990 | Msa1281130 | 0.815410 | 9.377595e-52 | -8.615850e-47 |
| Msa0304550 | Msa1281130 | 0.810778 | 9.732980e-51 | -8.615850e-47 |
| Msa0340650 | Msa1281130 | 0.800014 | 1.757783e-48 | -8.615850e-47 |
| Msa0341110 | Msa1281130 | 0.816752 | 4.703995e-52 | -8.615850e-47 |
| Msa0353040 | Msa1281130 | 0.803486 | 3.406936e-49 | -8.615850e-47 |
| Msa1108540 | Msa1281130 | 0.800935 | 1.141149e-48 | -8.615850e-47 |
| Msa1109890 | Msa1281130 | 0.820059 | 8.376441e-53 | -8.615850e-47 |
| Msa1152290 | Msa1281130 | 0.802898 | 4.508733e-49 | -8.615850e-47 |
| Msa1182800 | Msa1281130 | -0.819566 | 1.085947e-52 | -8.615850e-47 |
| Msa1214960 | Msa1281130 | 0.803935 | 2.748710e-49 | -8.615850e-47 |
| Msa0491770 | Msa1281130 | 0.800013 | 1.758626e-48 | -8.615850e-47 |
| Msa0515260 | Msa1281130 | 0.820740 | 5.845644e-53 | -8.615850e-47 |
| Msa0529360 | Msa1281130 | 0.806520 | 7.904750e-50 | -8.615850e-47 |
| Msa0538650 | Msa1281130 | 0.807436 | 5.058951e-50 | -8.615850e-47 |
| Msa0577050 | Msa1281130 | -0.800839 | 1.194050e-48 | -8.615850e-47 |
| Msa0853500 | Msa1281130 | -0.821440 | 4.032947e-53 | -8.615850e-47 |
| Msa0883640 | Msa1281130 | 0.817114 | 3.899735e-52 | -8.615850e-47 |
| Msa0904630 | Msa1281130 | -0.811372 | 7.236648e-51 | -8.615850e-47 |
| Msa0910830 | Msa1281130 | 0.818497 | 1.900530e-52 | -8.615850e-47 |
| Msa0960090 | Msa1281130 | 0.819083 | 1.398875e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281130 | MtrunA17_Chr8g0351701 | 96.567 | 233 | 6 | 2 | 1 | 232 | 1 | 232 | 3.80e-165 | 455 |
| Msa1281130 | MtrunA17_Chr7g0245871 | 54.872 | 195 | 82 | 2 | 24 | 212 | 27 | 221 | 9.90e-69 | 211 |
| Msa1281130 | MtrunA17_Chr8g0351721 | 51.887 | 212 | 81 | 5 | 12 | 213 | 4 | 204 | 2.29e-64 | 199 |
| Msa1281130 | MtrunA17_Chr7g0260971 | 67.544 | 114 | 37 | 0 | 13 | 126 | 3 | 116 | 1.08e-51 | 167 |
| Msa1281130 | MtrunA17_Chr7g0261031 | 52.903 | 155 | 64 | 2 | 19 | 173 | 3 | 148 | 1.24e-51 | 167 |
| Msa1281130 | MtrunA17_Chr1g0184271 | 70.874 | 103 | 30 | 0 | 24 | 126 | 12 | 114 | 1.60e-51 | 167 |
| Msa1281130 | MtrunA17_Chr7g0245861 | 73.737 | 99 | 23 | 3 | 15 | 111 | 4 | 101 | 1.99e-46 | 150 |
| Msa1281130 | MtrunA17_Chr6g0460951 | 56.522 | 138 | 53 | 1 | 24 | 154 | 40 | 177 | 2.36e-46 | 153 |
| Msa1281130 | MtrunA17_Chr1g0184281 | 72.632 | 95 | 26 | 0 | 24 | 118 | 15 | 109 | 8.71e-46 | 151 |
| Msa1281130 | MtrunA17_Chr5g0435641 | 59.821 | 112 | 45 | 0 | 19 | 130 | 2 | 113 | 3.74e-44 | 147 |
| Msa1281130 | MtrunA17_Chr4g0058651 | 53.030 | 132 | 57 | 2 | 23 | 150 | 10 | 140 | 4.34e-40 | 136 |
| Msa1281130 | MtrunA17_Chr4g0043421 | 53.333 | 120 | 55 | 1 | 13 | 132 | 4 | 122 | 1.40e-39 | 134 |
| Msa1281130 | MtrunA17_Chr7g0227511 | 57.522 | 113 | 43 | 2 | 24 | 132 | 11 | 122 | 7.68e-39 | 132 |
| Msa1281130 | MtrunA17_Chr2g0311601 | 51.695 | 118 | 56 | 1 | 15 | 132 | 4 | 120 | 3.59e-38 | 130 |
| Msa1281130 | MtrunA17_Chr5g0437571 | 52.800 | 125 | 53 | 3 | 16 | 139 | 2 | 121 | 3.80e-37 | 128 |
| Msa1281130 | MtrunA17_Chr3g0117121 | 58.095 | 105 | 43 | 1 | 24 | 128 | 10 | 113 | 6.57e-37 | 128 |
| Msa1281130 | MtrunA17_Chr3g0114061 | 42.857 | 161 | 78 | 4 | 16 | 176 | 2 | 148 | 4.57e-36 | 125 |
| Msa1281130 | MtrunA17_Chr5g0438091 | 47.586 | 145 | 71 | 3 | 14 | 158 | 29 | 168 | 4.76e-36 | 126 |
| Msa1281130 | MtrunA17_Chr3g0106101 | 48.438 | 128 | 61 | 2 | 15 | 142 | 2 | 124 | 6.57e-36 | 125 |
| Msa1281130 | MtrunA17_Chr5g0437401 | 55.882 | 102 | 44 | 1 | 25 | 126 | 12 | 112 | 5.84e-35 | 122 |
| Msa1281130 | MtrunA17_Chr3g0115431 | 55.172 | 116 | 51 | 1 | 23 | 138 | 8 | 122 | 9.72e-35 | 123 |
| Msa1281130 | MtrunA17_Chr6g0449641 | 56.863 | 102 | 43 | 1 | 24 | 125 | 9 | 109 | 2.02e-34 | 120 |
| Msa1281130 | MtrunA17_Chr5g0402611 | 55.172 | 116 | 47 | 2 | 19 | 132 | 3 | 115 | 2.27e-34 | 125 |
| Msa1281130 | MtrunA17_Chr3g0129071 | 52.586 | 116 | 54 | 1 | 17 | 132 | 40 | 154 | 4.33e-34 | 122 |
| Msa1281130 | MtrunA17_Chr3g0113891 | 56.842 | 95 | 40 | 1 | 25 | 119 | 15 | 108 | 6.21e-33 | 117 |
| Msa1281130 | MtrunA17_Chr3g0097221 | 51.786 | 112 | 53 | 1 | 19 | 130 | 2 | 112 | 3.21e-32 | 119 |
| Msa1281130 | MtrunA17_Chr6g0449651 | 53.333 | 105 | 48 | 1 | 24 | 128 | 67 | 170 | 9.71e-32 | 115 |
| Msa1281130 | MtrunA17_Chr6g0460941 | 59.091 | 88 | 36 | 0 | 24 | 111 | 7 | 94 | 4.63e-31 | 110 |
| Msa1281130 | MtrunA17_Chr4g0030001 | 47.748 | 111 | 56 | 2 | 23 | 132 | 23 | 132 | 4.57e-29 | 107 |
| Msa1281130 | MtrunA17_Chr8g0353981 | 61.728 | 81 | 30 | 1 | 24 | 104 | 7 | 86 | 1.29e-28 | 107 |
| Msa1281130 | MtrunA17_Chr5g0432451 | 55.263 | 114 | 50 | 1 | 16 | 129 | 35 | 147 | 4.71e-28 | 106 |
| Msa1281130 | MtrunA17_Chr1g0200201 | 47.222 | 108 | 56 | 1 | 25 | 132 | 73 | 179 | 8.41e-28 | 105 |
| Msa1281130 | MtrunA17_Chr5g0444351 | 43.519 | 108 | 60 | 1 | 23 | 130 | 4 | 110 | 1.60e-25 | 97.4 |
| Msa1281130 | MtrunA17_Chr7g0225111 | 41.509 | 106 | 61 | 1 | 25 | 130 | 6 | 110 | 2.33e-24 | 93.6 |
| Msa1281130 | MtrunA17_Chr8g0374601 | 43.119 | 109 | 61 | 1 | 24 | 132 | 26 | 133 | 2.80e-23 | 95.1 |
| Msa1281130 | MtrunA17_Chr8g0374591 | 43.119 | 109 | 61 | 1 | 24 | 132 | 8 | 115 | 5.73e-22 | 87.8 |
| Msa1281130 | MtrunA17_Chr4g0059901 | 41.414 | 99 | 57 | 1 | 20 | 118 | 6 | 103 | 1.70e-19 | 84.3 |
| Msa1281130 | MtrunA17_Chr8g0342351 | 38.095 | 105 | 64 | 1 | 25 | 129 | 13 | 116 | 3.86e-19 | 83.6 |
| Msa1281130 | MtrunA17_Chr4g0040831 | 31.928 | 166 | 96 | 4 | 17 | 166 | 8 | 172 | 8.26e-19 | 81.3 |
| Msa1281130 | MtrunA17_Chr8g0374581 | 38.182 | 110 | 66 | 2 | 24 | 132 | 8 | 116 | 6.59e-18 | 79.3 |
| Msa1281130 | MtrunA17_Chr2g0330201 | 40.404 | 99 | 58 | 1 | 20 | 118 | 15 | 112 | 1.18e-17 | 80.1 |
| Msa1281130 | MtrunA17_Chr6g0452691 | 39.806 | 103 | 60 | 2 | 25 | 126 | 10 | 111 | 3.75e-16 | 73.9 |
| Msa1281130 | MtrunA17_Chr6g0452671 | 36.735 | 98 | 61 | 1 | 25 | 122 | 12 | 108 | 1.47e-15 | 72.8 |
| Msa1281130 | MtrunA17_Chr4g0055441 | 35.922 | 103 | 64 | 2 | 25 | 126 | 3 | 104 | 1.59e-15 | 71.6 |
| Msa1281130 | MtrunA17_Chr6g0452661 | 33.981 | 103 | 66 | 2 | 25 | 126 | 10 | 111 | 8.69e-14 | 68.6 |
| Msa1281130 | MtrunA17_Chr2g0326041 | 52.941 | 51 | 23 | 1 | 23 | 73 | 32 | 81 | 2.46e-12 | 61.2 |
| Msa1281130 | MtrunA17_Chr2g0326051 | 44.444 | 63 | 35 | 0 | 70 | 132 | 5 | 67 | 6.23e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281130 | AT4G00220.1 | 62.105 | 190 | 63 | 2 | 27 | 211 | 20 | 205 | 1.73e-76 | 231 |
| Msa1281130 | AT2G45420.1 | 57.534 | 219 | 73 | 5 | 27 | 226 | 40 | 257 | 5.24e-73 | 223 |
| Msa1281130 | AT4G00210.1 | 50.242 | 207 | 93 | 4 | 16 | 213 | 3 | 208 | 2.96e-60 | 189 |
| Msa1281130 | AT2G42430.1 | 65.254 | 118 | 41 | 0 | 13 | 130 | 4 | 121 | 1.77e-52 | 170 |
| Msa1281130 | AT3G03760.1 | 71.963 | 107 | 30 | 0 | 24 | 130 | 51 | 157 | 2.13e-51 | 168 |
| Msa1281130 | AT2G45410.1 | 64.655 | 116 | 36 | 1 | 27 | 137 | 19 | 134 | 2.48e-51 | 165 |
| Msa1281130 | AT3G58190.1 | 48.588 | 177 | 79 | 3 | 24 | 198 | 11 | 177 | 5.10e-50 | 163 |
| Msa1281130 | AT2G42440.1 | 64.423 | 104 | 37 | 0 | 19 | 122 | 2 | 105 | 3.95e-47 | 156 |
| Msa1281130 | AT5G06080.1 | 49.640 | 139 | 66 | 1 | 25 | 159 | 8 | 146 | 1.01e-44 | 148 |
| Msa1281130 | AT2G31310.1 | 61.062 | 113 | 43 | 1 | 20 | 132 | 3 | 114 | 2.17e-44 | 147 |
| Msa1281130 | AT5G63090.4 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
| Msa1281130 | AT5G63090.3 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
| Msa1281130 | AT5G63090.2 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
| Msa1281130 | AT5G63090.1 | 48.066 | 181 | 84 | 6 | 24 | 203 | 11 | 182 | 1.91e-39 | 135 |
| Msa1281130 | AT3G27650.1 | 57.143 | 105 | 44 | 1 | 24 | 128 | 39 | 142 | 1.26e-36 | 127 |
| Msa1281130 | AT2G30130.1 | 52.459 | 122 | 53 | 2 | 14 | 135 | 2 | 118 | 6.46e-36 | 126 |
| Msa1281130 | AT1G31320.1 | 57.609 | 92 | 38 | 1 | 20 | 111 | 9 | 99 | 1.88e-33 | 119 |
| Msa1281130 | AT5G66870.1 | 50.000 | 138 | 67 | 2 | 19 | 156 | 2 | 137 | 2.76e-33 | 122 |
| Msa1281130 | AT3G11090.1 | 42.581 | 155 | 76 | 4 | 25 | 171 | 12 | 161 | 3.93e-32 | 115 |
| Msa1281130 | AT1G07900.1 | 48.598 | 107 | 54 | 1 | 23 | 129 | 32 | 137 | 1.13e-30 | 112 |
| Msa1281130 | AT2G23660.2 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
| Msa1281130 | AT2G23660.3 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
| Msa1281130 | AT2G23660.1 | 47.458 | 118 | 61 | 1 | 21 | 138 | 2 | 118 | 1.23e-30 | 115 |
| Msa1281130 | AT1G16530.1 | 42.222 | 135 | 74 | 3 | 15 | 146 | 5 | 138 | 1.83e-30 | 111 |
| Msa1281130 | AT2G28500.1 | 51.456 | 103 | 49 | 1 | 24 | 126 | 55 | 156 | 2.60e-30 | 112 |
| Msa1281130 | AT2G30340.1 | 45.833 | 120 | 64 | 1 | 16 | 135 | 44 | 162 | 6.49e-29 | 110 |
| Msa1281130 | AT2G30340.2 | 45.833 | 120 | 64 | 1 | 16 | 135 | 45 | 163 | 7.52e-29 | 109 |
| Msa1281130 | AT1G65620.1 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
| Msa1281130 | AT1G65620.4 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
| Msa1281130 | AT1G65620.3 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
| Msa1281130 | AT1G65620.5 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
| Msa1281130 | AT1G65620.2 | 56.604 | 106 | 45 | 1 | 24 | 129 | 9 | 113 | 1.11e-28 | 107 |
| Msa1281130 | AT3G26660.1 | 45.631 | 103 | 55 | 1 | 25 | 127 | 6 | 107 | 1.95e-28 | 104 |
| Msa1281130 | AT3G26620.1 | 45.631 | 103 | 55 | 1 | 25 | 127 | 6 | 107 | 3.75e-28 | 103 |
| Msa1281130 | AT2G40470.2 | 52.137 | 117 | 55 | 1 | 13 | 129 | 9 | 124 | 2.60e-27 | 103 |
| Msa1281130 | AT2G40470.1 | 52.137 | 117 | 55 | 1 | 13 | 129 | 34 | 149 | 3.57e-27 | 104 |
| Msa1281130 | AT3G50510.1 | 38.686 | 137 | 82 | 2 | 24 | 160 | 12 | 146 | 3.07e-26 | 101 |
| Msa1281130 | AT3G50510.2 | 38.686 | 137 | 82 | 2 | 24 | 160 | 12 | 146 | 3.07e-26 | 101 |
| Msa1281130 | AT5G35900.1 | 31.351 | 185 | 117 | 4 | 25 | 200 | 6 | 189 | 1.91e-20 | 86.3 |
| Msa1281130 | AT3G13850.1 | 38.462 | 104 | 63 | 1 | 25 | 128 | 37 | 139 | 1.04e-18 | 82.8 |
| Msa1281130 | AT1G72980.1 | 33.871 | 124 | 80 | 2 | 20 | 142 | 9 | 131 | 3.89e-16 | 74.7 |
| Msa1281130 | AT3G47870.1 | 35.398 | 113 | 69 | 2 | 16 | 128 | 31 | 139 | 4.65e-16 | 76.3 |
| Msa1281130 | AT4G22700.1 | 30.065 | 153 | 101 | 4 | 21 | 172 | 2 | 149 | 4.20e-14 | 68.9 |
| Msa1281130 | AT1G06280.1 | 42.667 | 75 | 42 | 1 | 25 | 99 | 25 | 98 | 6.94e-14 | 68.6 |
Find 70 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGAGCCCCGCCAATATT+TGG | 0.160749 | 8_3:+20376419 | Msa1281130:CDS |
| TAGATCAAAGATTGTTCATT+TGG | 0.270427 | 8_3:-20376568 | None:intergenic |
| CAAATATTGGCGGGGCTCAT+TGG | 0.328917 | 8_3:-20376418 | None:intergenic |
| ACATCATCCACTAGCAATAA+TGG | 0.352137 | 8_3:+20376450 | Msa1281130:CDS |
| GGTGGAGGTGTTGGTGGTTG+AGG | 0.362273 | 8_3:-20376267 | None:intergenic |
| ATGGCTGAAGAAGGGGCTAA+TGG | 0.363007 | 8_3:-20376324 | None:intergenic |
| GCATGACCCATGATGAAGTT+TGG | 0.364374 | 8_3:-20376386 | None:intergenic |
| GAAGACAAGTCATATGTATC+TGG | 0.372604 | 8_3:-20376348 | None:intergenic |
| CATGACCCATGATGAAGTTT+GGG | 0.376247 | 8_3:-20376385 | None:intergenic |
| AATGAGCCCCGCCAATATTT+GGG | 0.384284 | 8_3:+20376420 | Msa1281130:CDS |
| AGGTTGAGAGATCCCGTCTT+TGG | 0.394288 | 8_3:+20372412 | Msa1281130:CDS |
| AGTGCTTGTGGTGGAGGTGT+TGG | 0.400398 | 8_3:-20376276 | None:intergenic |
| AAATATTGGCGGGGCTCATT+GGG | 0.412129 | 8_3:-20376417 | None:intergenic |
| TATCTTTACTCTTCAGCAAC+AGG | 0.415923 | 8_3:+20372447 | Msa1281130:CDS |
| TGGCTGAAGAAGGGGCTAAT+GGG | 0.433908 | 8_3:-20376323 | None:intergenic |
| ATGTGCCACTACCCAAATAT+TGG | 0.434191 | 8_3:-20376431 | None:intergenic |
| TTTGAGAAGGAAGTGTATCC+CGG | 0.449160 | 8_3:+20372228 | Msa1281130:CDS |
| AGTGGTTGCAGTGGCGGTGG+TGG | 0.450413 | 8_3:+20372166 | Msa1281130:CDS |
| CCTTACTTCGATTCGGAGCA+AGG | 0.451165 | 8_3:+20372265 | Msa1281130:CDS |
| TGCTTGAGCTTCATAACAAA+TGG | 0.458370 | 8_3:-20372389 | None:intergenic |
| ATTGGAAGTGCTTGTGGTGG+AGG | 0.458768 | 8_3:-20376282 | None:intergenic |
| AAAGTTGCTACAAAATGTTC+CGG | 0.465613 | 8_3:+20372339 | Msa1281130:CDS |
| GCTTGTGGTGGAGGTGTTGG+TGG | 0.478286 | 8_3:-20376273 | None:intergenic |
| TTGGAAAGAGAATGAGATGA+TGG | 0.479844 | 8_3:-20376549 | None:intergenic |
| CCTTGCTCCGAATCGAAGTA+AGG | 0.493406 | 8_3:-20372265 | None:intergenic |
| AACTCAGGTTGTAGCGGTAG+TGG | 0.496028 | 8_3:+20372148 | Msa1281130:CDS |
| GTATCTGGCATGGCTGAAGA+AGG | 0.503262 | 8_3:-20376333 | None:intergenic |
| GCCACTACCCAAATATTGGC+GGG | 0.507847 | 8_3:-20376427 | None:intergenic |
| CCCCGCCAATATTTGGGTAG+TGG | 0.517665 | 8_3:+20376426 | Msa1281130:CDS |
| TGGAAAGAGAATGAGATGAT+GGG | 0.519184 | 8_3:-20376548 | None:intergenic |
| GGTAGTGGTTGCAGTGGCGG+TGG | 0.527599 | 8_3:+20372163 | Msa1281130:CDS |
| AAGTACCCCAAACTTCATCA+TGG | 0.535257 | 8_3:+20376379 | Msa1281130:CDS |
| ATCACCACCATTATTGCTAG+TGG | 0.552303 | 8_3:-20376457 | None:intergenic |
| GAGGTACTTCATATGTAGCT+AGG | 0.553041 | 8_3:-20376248 | None:intergenic |
| GCATCAAGACGCTTGTGTAC+CGG | 0.555181 | 8_3:-20372358 | None:intergenic |
| TATCTGGCATGGCTGAAGAA+GGG | 0.557341 | 8_3:-20376332 | None:intergenic |
| ATGAGCAACACAACCAAAGA+CGG | 0.560188 | 8_3:-20372425 | None:intergenic |
| TGCCACTACCCAAATATTGG+CGG | 0.560339 | 8_3:-20376428 | None:intergenic |
| AGAAGGGGCTAATGGGAGGT+TGG | 0.565320 | 8_3:-20376316 | None:intergenic |
| ATCTGGCATGGCTGAAGAAG+GGG | 0.574156 | 8_3:-20376331 | None:intergenic |
| TGGTGGTGATCTTCAAGCAT+TGG | 0.576068 | 8_3:+20376470 | Msa1281130:CDS |
| GCAGAACTCTCCTACTTACA+AGG | 0.583111 | 8_3:+20376222 | Msa1281130:CDS |
| AGCGGTAGTGGTTGCAGTGG+CGG | 0.583643 | 8_3:+20372160 | Msa1281130:CDS |
| TTGAGAAGGAAGTGTATCCC+GGG | 0.588366 | 8_3:+20372229 | Msa1281130:CDS |
| AGCGGTGCTTGTGGCCCTTG+TGG | 0.589999 | 8_3:+20372193 | Msa1281130:CDS |
| GGTACACAAGCGTCTTGATG+CGG | 0.599993 | 8_3:+20372360 | Msa1281130:CDS |
| TCCACCACAAGCACTTCCAA+TGG | 0.600735 | 8_3:+20376284 | Msa1281130:CDS |
| AGCTAGGTGGCCTTGTAAGT+AGG | 0.602023 | 8_3:-20376232 | None:intergenic |
| GGAAAGAGAATGAGATGATG+GGG | 0.602088 | 8_3:-20376547 | None:intergenic |
| TTTAAGATGAGTATAAACTC+AGG | 0.604341 | 8_3:+20372133 | None:intergenic |
| ACATTTCGCAGCGGTTCACA+AGG | 0.604702 | 8_3:+20372294 | Msa1281130:CDS |
| TTTGTTATGAAGCTCAAGCA+AGG | 0.608232 | 8_3:+20372392 | Msa1281130:CDS |
| GGTGGAAACAGCGGTGCTTG+TGG | 0.613566 | 8_3:+20372184 | Msa1281130:CDS |
| GAGACCATTGGAAGTGCTTG+TGG | 0.614748 | 8_3:-20376288 | None:intergenic |
| CTGAAGAAGGGGCTAATGGG+AGG | 0.615538 | 8_3:-20376320 | None:intergenic |
| TGAGCAACACAACCAAAGAC+GGG | 0.618298 | 8_3:-20372424 | None:intergenic |
| CCACTACCCAAATATTGGCG+GGG | 0.618911 | 8_3:-20376426 | None:intergenic |
| AGTACCCCAAACTTCATCAT+GGG | 0.621265 | 8_3:+20376380 | Msa1281130:CDS |
| GCATCAGAGCATGCAACATG+AGG | 0.623709 | 8_3:-20376525 | None:intergenic |
| CAAGTCATATGTATCTGGCA+TGG | 0.623715 | 8_3:-20376343 | None:intergenic |
| TGTAGCGGTAGTGGTTGCAG+TGG | 0.628263 | 8_3:+20372157 | Msa1281130:CDS |
| AGGTTGGCTAGTGAGACCAT+TGG | 0.630062 | 8_3:-20376300 | None:intergenic |
| ACCATTGGAAGTGCTTGTGG+TGG | 0.654201 | 8_3:-20376285 | None:intergenic |
| AGTATAAACTCAGGTTGTAG+CGG | 0.660402 | 8_3:+20372142 | Msa1281130:CDS |
| AAAACTTGCATGCGCCACAA+GGG | 0.663949 | 8_3:-20372207 | None:intergenic |
| AGGCGCTTCACATTTCGCAG+CGG | 0.690521 | 8_3:+20372285 | Msa1281130:CDS |
| AGTGGCGGTGGTGGAAACAG+CGG | 0.697252 | 8_3:+20372175 | Msa1281130:CDS |
| TCATCCACTAGCAATAATGG+TGG | 0.700074 | 8_3:+20376453 | Msa1281130:CDS |
| GTACTTCATATGTAGCTAGG+TGG | 0.723309 | 8_3:-20376245 | None:intergenic |
| ATGACCCATGATGAAGTTTG+GGG | 0.727107 | 8_3:-20376384 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTAATTACTTAATTAT+TGG | + | chr8_3:20372504-20372523 | Msa1281130:intron | 10.0% |
| !!! | TACTTATTTTCTTTAAATTA+AGG | - | chr8_3:20373625-20373644 | None:intergenic | 10.0% |
| !! | TTTAAAAAATATAACAAGAT+GGG | - | chr8_3:20373676-20373695 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAATATAACAAGA+TGG | - | chr8_3:20373677-20373696 | None:intergenic | 10.0% |
| !!! | TGTTATATTTTTTAAAATAG+AGG | + | chr8_3:20373680-20373699 | Msa1281130:intron | 10.0% |
| !!! | CTAATATTTTGTTTAAAATA+TGG | - | chr8_3:20374901-20374920 | None:intergenic | 10.0% |
| !!! | ATCTAAACATCTTTTTTTTA+TGG | - | chr8_3:20372738-20372757 | None:intergenic | 15.0% |
| !!! | TTATAGTTAGTAATTTTTAG+CGG | + | chr8_3:20372891-20372910 | Msa1281130:intron | 15.0% |
| !!! | AGTTTTTTTATTTTGAAGAT+GGG | - | chr8_3:20373053-20373072 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTTATTTTGAAGA+TGG | - | chr8_3:20373054-20373073 | None:intergenic | 15.0% |
| !! | ACTTATATATAACTAATGAT+CGG | + | chr8_3:20373070-20373089 | Msa1281130:intron | 15.0% |
| !! | TATCTTAATGTGAATAAATT+GGG | + | chr8_3:20374093-20374112 | Msa1281130:intron | 15.0% |
| !!! | GAGTATATATTTTTTAAATC+AGG | - | chr8_3:20374192-20374211 | None:intergenic | 15.0% |
| !! | ATTAAGAAAAAAAAATGGAT+TGG | - | chr8_3:20374660-20374679 | None:intergenic | 15.0% |
| !!! | TTTTTAGTTAGAAAATATGA+TGG | - | chr8_3:20374759-20374778 | None:intergenic | 15.0% |
| !! | TTAAACAAAATATTAGAAAG+AGG | + | chr8_3:20374905-20374924 | Msa1281130:intron | 15.0% |
| !!! | TTTTCACTATTTTACAAAAT+TGG | - | chr8_3:20374962-20374981 | None:intergenic | 15.0% |
| !!! | TTTTGTAAAATAGTGAAAAT+AGG | + | chr8_3:20374963-20374982 | Msa1281130:intron | 15.0% |
| !! | TTTGTAAAATAGTGAAAATA+GGG | + | chr8_3:20374964-20374983 | Msa1281130:intron | 15.0% |
| !!! | TTTTGACAGTTATAAAATAA+GGG | - | chr8_3:20375103-20375122 | None:intergenic | 15.0% |
| !!! | ATTTTGACAGTTATAAAATA+AGG | - | chr8_3:20375104-20375123 | None:intergenic | 15.0% |
| !!! | TTATTTTATAACTGTCAAAA+TGG | + | chr8_3:20375103-20375122 | Msa1281130:intron | 15.0% |
| !!! | ATATTTCTTTTTTGTTTCAT+AGG | + | chr8_3:20376185-20376204 | Msa1281130:intron | 15.0% |
| !! | ACTCAAATTTCATATTGATA+AGG | + | chr8_3:20372785-20372804 | Msa1281130:intron | 20.0% |
| !!! | ATCAAGTAAACGATTTTTTA+TGG | + | chr8_3:20373157-20373176 | Msa1281130:intron | 20.0% |
| !! | TAATTGATTAAGAAGTGATA+TGG | + | chr8_3:20373420-20373439 | Msa1281130:intron | 20.0% |
| !! | TGGCAAATTGATTAATTATT+TGG | + | chr8_3:20373826-20373845 | Msa1281130:intron | 20.0% |
| !! | AGTAAATGTTACTACTATAT+TGG | + | chr8_3:20374011-20374030 | Msa1281130:intron | 20.0% |
| !! | GTATCTTAATGTGAATAAAT+TGG | + | chr8_3:20374092-20374111 | Msa1281130:intron | 20.0% |
| !!! | TACATGTTGATATTGATTAA+TGG | - | chr8_3:20374214-20374233 | None:intergenic | 20.0% |
| !! | AATTAAAGACTTAAAGCAAA+GGG | - | chr8_3:20374429-20374448 | None:intergenic | 20.0% |
| !! | TAATTAAAGACTTAAAGCAA+AGG | - | chr8_3:20374430-20374449 | None:intergenic | 20.0% |
| !! | CTGCAATTAAGAAAAAAAAA+TGG | - | chr8_3:20374665-20374684 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTAATTGCAGTTT+TGG | + | chr8_3:20374668-20374687 | Msa1281130:intron | 20.0% |
| !! | TCCACAAAAAGATATAAATA+GGG | - | chr8_3:20374696-20374715 | None:intergenic | 20.0% |
| !! | TTCCACAAAAAGATATAAAT+AGG | - | chr8_3:20374697-20374716 | None:intergenic | 20.0% |
| !!! | TTTATATCTTTTTGTGGAAT+TGG | + | chr8_3:20374698-20374717 | Msa1281130:intron | 20.0% |
| !!! | AACTGTCGAATTTTAAAATA+GGG | - | chr8_3:20374934-20374953 | None:intergenic | 20.0% |
| !!! | AAACTGTCGAATTTTAAAAT+AGG | - | chr8_3:20374933-20374952 | None:intergenic | 20.0% |
| !!! | ATTTTAAAATTCGACAGTTT+TGG | + | chr8_3:20374728-20374747 | Msa1281130:intron | 20.0% |
| !!! | ATTTTAAAATTCGACAGTTT+TGG | - | chr8_3:20374728-20374747 | None:intergenic | 20.0% |
| !!! | AAACTGTCGAATTTTAAAAT+AGG | + | chr8_3:20374933-20374952 | Msa1281130:intron | 20.0% |
| !!! | AACTGTCGAATTTTAAAATA+GGG | + | chr8_3:20374934-20374953 | Msa1281130:intron | 20.0% |
| !! | TTGTAAAATAGTGAAAATAG+GGG | + | chr8_3:20374965-20374984 | Msa1281130:intron | 20.0% |
| !! | AAGGATTCTACTAAAAAAAT+TGG | - | chr8_3:20375010-20375029 | None:intergenic | 20.0% |
| !!! | CAAAGTTCTAAATTTTTGAA+CGG | - | chr8_3:20375150-20375169 | None:intergenic | 20.0% |
| !! | AAATAACCAAATAAGAAAAG+TGG | + | chr8_3:20375778-20375797 | Msa1281130:intron | 20.0% |
| ! | ATCATGCTATATTCTAGATA+AGG | + | chr8_3:20372536-20372555 | Msa1281130:intron | 25.0% |
| ! | TAGAAACCACAAAAACTATT+TGG | + | chr8_3:20372758-20372777 | Msa1281130:intron | 25.0% |
| !! | GTTTTTCCAAATAGTTTTTG+TGG | - | chr8_3:20372767-20372786 | None:intergenic | 25.0% |
| !!! | CCTTGTAAGTTTTTTTGAAA+CGG | + | chr8_3:20372853-20372872 | Msa1281130:intron | 25.0% |
| ! | TGGATATGATGAGTAATTTA+CGG | - | chr8_3:20372964-20372983 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTGAAGATGGGT+GGG | - | chr8_3:20373049-20373068 | None:intergenic | 25.0% |
| !!! | TTTTTTATTTTGAAGATGGG+TGG | - | chr8_3:20373050-20373069 | None:intergenic | 25.0% |
| ! | TTCTTGCTTGTAAAAATGTA+AGG | - | chr8_3:20373136-20373155 | None:intergenic | 25.0% |
| ! | TATGGAAAGATGAAACTAAA+AGG | + | chr8_3:20373175-20373194 | Msa1281130:intron | 25.0% |
| !!! | AAGAGTTTGTTGATGAATAT+TGG | - | chr8_3:20373213-20373232 | None:intergenic | 25.0% |
| !!! | GTTAGTAGTATACTTTTTCT+TGG | + | chr8_3:20373245-20373264 | Msa1281130:intron | 25.0% |
| ! | TCTTAATCAATTAAGCTTTG+TGG | - | chr8_3:20373413-20373432 | None:intergenic | 25.0% |
| ! | GAACTAATACTAGTAATCTA+TGG | + | chr8_3:20373467-20373486 | Msa1281130:intron | 25.0% |
| !! | TGTTTCTATATGAGAAGATA+GGG | - | chr8_3:20373602-20373621 | None:intergenic | 25.0% |
| ! | AAAAATATAACAAGATGGGT+GGG | - | chr8_3:20373672-20373691 | None:intergenic | 25.0% |
| ! | AAAAAATATAACAAGATGGG+TGG | - | chr8_3:20373673-20373692 | None:intergenic | 25.0% |
| !!! | GTCTTTCTTGTTATTGTTTT+TGG | + | chr8_3:20373760-20373779 | Msa1281130:intron | 25.0% |
| ! | ACTACTATATTGGAGTATAT+TGG | + | chr8_3:20374021-20374040 | Msa1281130:intron | 25.0% |
| !!! | ATACTAGTATTTTGTTTGTC+AGG | + | chr8_3:20374048-20374067 | Msa1281130:intron | 25.0% |
| ! | TTTATATCCCAAAATGACTT+TGG | + | chr8_3:20374276-20374295 | Msa1281130:intron | 25.0% |
| !! | TTTCATGAAGCAAAACATTT+TGG | + | chr8_3:20374361-20374380 | Msa1281130:intron | 25.0% |
| ! | GAAAAATGAGAACTATAAAC+TGG | - | chr8_3:20374493-20374512 | None:intergenic | 25.0% |
| !! | TCCCTATTTATATCTTTTTG+TGG | + | chr8_3:20374692-20374711 | Msa1281130:intron | 25.0% |
| ! | TTAGTTAGAAAATATGATGG+AGG | - | chr8_3:20374756-20374775 | None:intergenic | 25.0% |
| !!! | ACTGTCGAATTTTAAAATAG+GGG | + | chr8_3:20374935-20374954 | Msa1281130:intron | 25.0% |
| ! | TGTAAAATAGTGAAAATAGG+GGG | + | chr8_3:20374966-20374985 | Msa1281130:intron | 25.0% |
| !!! | TGTCTTAAGAGTATTGTTTA+AGG | - | chr8_3:20375029-20375048 | None:intergenic | 25.0% |
| !! | AAACCTTTAGTTTATACCAA+CGG | + | chr8_3:20375059-20375078 | Msa1281130:intron | 25.0% |
| ! | TTGCCCAAATTAAAATGATT+TGG | + | chr8_3:20375252-20375271 | Msa1281130:intron | 25.0% |
| ! | TGCCCAAATTAAAATGATTT+GGG | + | chr8_3:20375253-20375272 | Msa1281130:intron | 25.0% |
| !!! | ACCCCAAATCATTTTAATTT+GGG | - | chr8_3:20375258-20375277 | None:intergenic | 25.0% |
| !!! | AACCCCAAATCATTTTAATT+TGG | - | chr8_3:20375259-20375278 | None:intergenic | 25.0% |
| !! | ATTAAAATGATTTGGGGTTA+TGG | + | chr8_3:20375260-20375279 | Msa1281130:intron | 25.0% |
| ! | AATCATAAAAAATAGGACCT+GGG | - | chr8_3:20375396-20375415 | None:intergenic | 25.0% |
| ! | AAATCATAAAAAATAGGACC+TGG | - | chr8_3:20375397-20375416 | None:intergenic | 25.0% |
| ! | GAGCAGAAATCATAAAAAAT+AGG | - | chr8_3:20375403-20375422 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr8_3:20375611-20375630 | None:intergenic | 25.0% |
| ! | TAGTATTTCTCTCTTCTTAT+TGG | - | chr8_3:20375624-20375643 | None:intergenic | 25.0% |
| ! | AATAAGAAGAGAGAAATACT+AGG | + | chr8_3:20375623-20375642 | Msa1281130:intron | 25.0% |
| AAAGTTGCTACAAAATGTTC+CGG | + | chr8_3:20372339-20372358 | Msa1281130:CDS | 30.0% | |
| AAAGGATATATACTAGGGAT+AGG | - | chr8_3:20372602-20372621 | None:intergenic | 30.0% | |
| GAGAGAAAGGATATATACTA+GGG | - | chr8_3:20372607-20372626 | None:intergenic | 30.0% | |
| AGAGAGAAAGGATATATACT+AGG | - | chr8_3:20372608-20372627 | None:intergenic | 30.0% | |
| GTCAAGACAAGAAAAAGAAA+GGG | - | chr8_3:20372704-20372723 | None:intergenic | 30.0% | |
| AGTCAAGACAAGAAAAAGAA+AGG | - | chr8_3:20372705-20372724 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCTTGTCTTGACT+TGG | + | chr8_3:20372705-20372724 | Msa1281130:intron | 30.0% |
| CCGTTTCAAAAAAACTTACA+AGG | - | chr8_3:20372856-20372875 | None:intergenic | 30.0% | |
| TGGAAAACAAACTTACAATG+TGG | - | chr8_3:20372992-20373011 | None:intergenic | 30.0% | |
| !! | CATTGTAAGTTTGTTTTCCA+AGG | + | chr8_3:20372992-20373011 | Msa1281130:intron | 30.0% |
| ! | TTGTTTTCCAAGGATGTTTA+TGG | + | chr8_3:20373002-20373021 | Msa1281130:intron | 30.0% |
| TGATTAAGAAGTGATATGGT+CGG | + | chr8_3:20373424-20373443 | Msa1281130:intron | 30.0% | |
| GATTCAACCATTAACATCAT+TGG | + | chr8_3:20373489-20373508 | Msa1281130:intron | 30.0% | |
| ACTAAGACCAATGATGTTAA+TGG | - | chr8_3:20373499-20373518 | None:intergenic | 30.0% | |
| !!! | TCTTAGTTTTTGCTGGTTTT+AGG | + | chr8_3:20373512-20373531 | Msa1281130:intron | 30.0% |
| !!! | CTTAGTTTTTGCTGGTTTTA+GGG | + | chr8_3:20373513-20373532 | Msa1281130:intron | 30.0% |
| !!! | TTAGTTTTTGCTGGTTTTAG+GGG | + | chr8_3:20373514-20373533 | Msa1281130:intron | 30.0% |
| ! | GTGTTTCTATATGAGAAGAT+AGG | - | chr8_3:20373603-20373622 | None:intergenic | 30.0% |
| ACAAGAAAGACCACAATTTA+GGG | - | chr8_3:20373751-20373770 | None:intergenic | 30.0% | |
| AACAAGAAAGACCACAATTT+AGG | - | chr8_3:20373752-20373771 | None:intergenic | 30.0% | |
| TTACTAGTACTTGAGAAACT+TGG | + | chr8_3:20373796-20373815 | Msa1281130:intron | 30.0% | |
| TCAAACAATATCCAACAATG+TGG | - | chr8_3:20373925-20373944 | None:intergenic | 30.0% | |
| !! | TAGTATTTTGTTTGTCAGGT+AGG | + | chr8_3:20374052-20374071 | Msa1281130:intron | 30.0% |
| GACATTGACCAATTATTTGA+GGG | - | chr8_3:20374163-20374182 | None:intergenic | 30.0% | |
| TGACATTGACCAATTATTTG+AGG | - | chr8_3:20374164-20374183 | None:intergenic | 30.0% | |
| !!! | AAACATTTTGGTGTTGTTCA+AGG | + | chr8_3:20374373-20374392 | Msa1281130:intron | 30.0% |
| ! | CTTTTACATGGGTCTATTAT+AGG | - | chr8_3:20374400-20374419 | None:intergenic | 30.0% |
| CTAAGAAACACTGTTATTAG+AGG | - | chr8_3:20374463-20374482 | None:intergenic | 30.0% | |
| !! | AATTGGCTTAATTGCAGTTT+TGG | - | chr8_3:20374993-20375012 | None:intergenic | 30.0% |
| !! | TCTAAATTTTTGAACGGACT+TGG | - | chr8_3:20375144-20375163 | None:intergenic | 30.0% |
| GCCCAAATTAAAATGATTTG+GGG | + | chr8_3:20375254-20375273 | Msa1281130:intron | 30.0% | |
| ! | AGTTTGAGTAAGACTTGTTT+GGG | - | chr8_3:20375293-20375312 | None:intergenic | 30.0% |
| ! | AAGTTTGAGTAAGACTTGTT+TGG | - | chr8_3:20375294-20375313 | None:intergenic | 30.0% |
| GTTAAAAAGTTGTCACAAAG+TGG | - | chr8_3:20375531-20375550 | None:intergenic | 30.0% | |
| !! | CATCGATTTATTGACAACTT+TGG | - | chr8_3:20375655-20375674 | None:intergenic | 30.0% |
| AAGAGAAAAACATGTACAAG+AGG | + | chr8_3:20375701-20375720 | Msa1281130:intron | 30.0% | |
| AGAGAAAAACATGTACAAGA+GGG | + | chr8_3:20375702-20375721 | Msa1281130:intron | 30.0% | |
| !!! | CGTTTTTTGTTTCCTTTTGA+GGG | - | chr8_3:20375741-20375760 | None:intergenic | 30.0% |
| !!! | TCGTTTTTTGTTTCCTTTTG+AGG | - | chr8_3:20375742-20375761 | None:intergenic | 30.0% |
| !!! | TTATGGCCACTTTTCTTATT+TGG | - | chr8_3:20375787-20375806 | None:intergenic | 30.0% |
| ! | TGAGCATAACCTTTTCTTTA+TGG | - | chr8_3:20375804-20375823 | None:intergenic | 30.0% |
| !! | GTTATAGAAATTGGCTTTGT+TGG | + | chr8_3:20375854-20375873 | Msa1281130:intron | 30.0% |
| TGAATTGCTTCGACAAATAA+GGG | - | chr8_3:20375946-20375965 | None:intergenic | 30.0% | |
| TTGAATTGCTTCGACAAATA+AGG | - | chr8_3:20375947-20375966 | None:intergenic | 30.0% | |
| CCATATAGCTACTAAGAAAA+CGG | - | chr8_3:20376010-20376029 | None:intergenic | 30.0% | |
| ! | CGTTTTCTTAGTAGCTATAT+GGG | + | chr8_3:20376008-20376027 | Msa1281130:intron | 30.0% |
| ! | TGTATCTTTTCAATGTCGTT+GGG | - | chr8_3:20376053-20376072 | None:intergenic | 30.0% |
| ! | TTGTATCTTTTCAATGTCGT+TGG | - | chr8_3:20376054-20376073 | None:intergenic | 30.0% |
| CGACATTGAAAAGATACAAA+AGG | + | chr8_3:20376055-20376074 | Msa1281130:intron | 30.0% | |
| TACAAAAGGAAATATACGAG+TGG | + | chr8_3:20376069-20376088 | Msa1281130:intron | 30.0% | |
| TAGGTCACATAATATGAACA+TGG | - | chr8_3:20376159-20376178 | None:intergenic | 30.0% | |
| ! | AGTATAAACTCAGGTTGTAG+CGG | + | chr8_3:20372142-20372161 | Msa1281130:CDS | 35.0% |
| TGCTTGAGCTTCATAACAAA+TGG | - | chr8_3:20372392-20372411 | None:intergenic | 35.0% | |
| ! | TTTGTTATGAAGCTCAAGCA+AGG | + | chr8_3:20372392-20372411 | Msa1281130:CDS | 35.0% |
| TATCTTTACTCTTCAGCAAC+AGG | + | chr8_3:20372447-20372466 | Msa1281130:CDS | 35.0% | |
| ! | ATTATAGCTAGCTAGCTTCT+AGG | + | chr8_3:20372642-20372661 | Msa1281130:intron | 35.0% |
| !!! | GTAATTTTTAGCGGTATGCA+AGG | + | chr8_3:20372900-20372919 | Msa1281130:intron | 35.0% |
| ATGATGAGTAATTTACGGAG+CGG | - | chr8_3:20372959-20372978 | None:intergenic | 35.0% | |
| AACAAACTTACAATGTGGCT+TGG | - | chr8_3:20372987-20373006 | None:intergenic | 35.0% | |
| GATTAAGCCATAAACATCCT+TGG | - | chr8_3:20373012-20373031 | None:intergenic | 35.0% | |
| ! | ACTTTTGTTCCTCTTTTGGA+AGG | - | chr8_3:20373294-20373313 | None:intergenic | 35.0% |
| TCCAAAAGAGGAACAAAAGT+TGG | + | chr8_3:20373294-20373313 | Msa1281130:intron | 35.0% | |
| CCAAAAGAGGAACAAAAGTT+GGG | + | chr8_3:20373295-20373314 | Msa1281130:intron | 35.0% | |
| ! | AAAGTTGGGTTTGAGTCTTT+TGG | + | chr8_3:20373309-20373328 | Msa1281130:intron | 35.0% |
| ! | AAGTTGGGTTTGAGTCTTTT+GGG | + | chr8_3:20373310-20373329 | Msa1281130:intron | 35.0% |
| GAAAGAGGAAAACAAGGTAT+AGG | + | chr8_3:20373333-20373352 | Msa1281130:intron | 35.0% | |
| !!! | TCATTGGTCTTAGTTTTTGC+TGG | + | chr8_3:20373505-20373524 | Msa1281130:intron | 35.0% |
| !! | AAATGGTCGGTTAGTTTCTT+GGG | + | chr8_3:20373537-20373556 | Msa1281130:intron | 35.0% |
| !!! | TGGGCTTTGGATATTTTCAT+AGG | + | chr8_3:20373556-20373575 | Msa1281130:intron | 35.0% |
| TGGGATTGCTATATAGTGAT+AGG | - | chr8_3:20373653-20373672 | None:intergenic | 35.0% | |
| AAGTTAAGACACCATCAAAC+CGG | + | chr8_3:20373718-20373737 | Msa1281130:intron | 35.0% | |
| !!! | TTGAGAAACTTGGCTTGTTT+TGG | + | chr8_3:20373806-20373825 | Msa1281130:intron | 35.0% |
| AACGTTGAGATTAACTAGCT+AGG | + | chr8_3:20373864-20373883 | Msa1281130:intron | 35.0% | |
| CTTTATGTTGACCACATTGT+TGG | + | chr8_3:20373911-20373930 | Msa1281130:intron | 35.0% | |
| ATAGGGATTACAAACACGTA+GGG | - | chr8_3:20374139-20374158 | None:intergenic | 35.0% | |
| ! | ACCAATTATTTGAGGGCATA+GGG | - | chr8_3:20374156-20374175 | None:intergenic | 35.0% |
| !! | GAAGGAACCAAAGTCATTTT+GGG | - | chr8_3:20374286-20374305 | None:intergenic | 35.0% |
| ! | TGAAGGAACCAAAGTCATTT+TGG | - | chr8_3:20374287-20374306 | None:intergenic | 35.0% |
| ! | CTTTGAAAACTAACATCTCG+AGG | - | chr8_3:20374311-20374330 | None:intergenic | 35.0% |
| AGAAACACTGTTATTAGAGG+TGG | - | chr8_3:20374460-20374479 | None:intergenic | 35.0% | |
| CTAACGACTGCTCTTAATTA+GGG | + | chr8_3:20374549-20374568 | Msa1281130:intron | 35.0% | |
| TAGCCGTTGGTATAAACTAA+AGG | - | chr8_3:20375065-20375084 | None:intergenic | 35.0% | |
| TTTACATAGACTTTAGCCGT+TGG | - | chr8_3:20375078-20375097 | None:intergenic | 35.0% | |
| TATAACTGTCAAAATGGCAG+AGG | + | chr8_3:20375109-20375128 | Msa1281130:intron | 35.0% | |
| !! | ATTTTTGAACGGACTTGGTT+GGG | - | chr8_3:20375139-20375158 | None:intergenic | 35.0% |
| !! | AATTTTTGAACGGACTTGGT+TGG | - | chr8_3:20375140-20375159 | None:intergenic | 35.0% |
| TGAACACAAGTTATAAGAGC+AGG | + | chr8_3:20375328-20375347 | Msa1281130:intron | 35.0% | |
| GAACACAAGTTATAAGAGCA+GGG | + | chr8_3:20375329-20375348 | Msa1281130:intron | 35.0% | |
| AACACAAGTTATAAGAGCAG+GGG | + | chr8_3:20375330-20375349 | Msa1281130:intron | 35.0% | |
| ! | GTATTTTCGGCAAAACAGTT+TGG | - | chr8_3:20375450-20375469 | None:intergenic | 35.0% |
| GAGAAAAACATGTACAAGAG+GGG | + | chr8_3:20375703-20375722 | Msa1281130:intron | 35.0% | |
| !! | TTGTTTCCTTTTGAGGGTTT+TGG | - | chr8_3:20375735-20375754 | None:intergenic | 35.0% |
| GAAAAGTGGCCATAAAGAAA+AGG | + | chr8_3:20375792-20375811 | Msa1281130:intron | 35.0% | |
| TTCTGCTTCTTCGTAAGATA+AGG | + | chr8_3:20375885-20375904 | Msa1281130:intron | 35.0% | |
| TTCGTAAGATAAGGCGTAAA+CGG | + | chr8_3:20375894-20375913 | Msa1281130:intron | 35.0% | |
| TATAGCTACTAAGAAAACGG+CGG | - | chr8_3:20376007-20376026 | None:intergenic | 35.0% | |
| ! | CCGTTTTCTTAGTAGCTATA+TGG | + | chr8_3:20376007-20376026 | Msa1281130:intron | 35.0% |
| ! | GTATCTTTTCAATGTCGTTG+GGG | - | chr8_3:20376052-20376071 | None:intergenic | 35.0% |
| GAAGACAAGTCATATGTATC+TGG | - | chr8_3:20376351-20376370 | None:intergenic | 35.0% | |
| ACATCATCCACTAGCAATAA+TGG | + | chr8_3:20376450-20376469 | Msa1281130:CDS | 35.0% | |
| ! | AGAGAGCTTTTGCATAGATA+TGG | + | chr8_3:20376495-20376514 | Msa1281130:CDS | 35.0% |
| TGGAAAGAGAATGAGATGAT+GGG | - | chr8_3:20376551-20376570 | None:intergenic | 35.0% | |
| TTGGAAAGAGAATGAGATGA+TGG | - | chr8_3:20376552-20376571 | None:intergenic | 35.0% | |
| ! | TTTGAGAAGGAAGTGTATCC+CGG | + | chr8_3:20372228-20372247 | Msa1281130:CDS | 40.0% |
| TAAGGCGCAAAAATACATCC+CGG | - | chr8_3:20372250-20372269 | None:intergenic | 40.0% | |
| ! | TTTTGCGCCTTACTTCGATT+CGG | + | chr8_3:20372258-20372277 | Msa1281130:CDS | 40.0% |
| ATGAGCAACACAACCAAAGA+CGG | - | chr8_3:20372428-20372447 | None:intergenic | 40.0% | |
| CTGGAAAAGCTTAGAGAGAA+AGG | - | chr8_3:20372620-20372639 | None:intergenic | 40.0% | |
| AGCTAGCTAGCTATAATAGC+TGG | - | chr8_3:20372639-20372658 | None:intergenic | 40.0% | |
| TACGGAGCGGAATGATAAAA+AGG | - | chr8_3:20372946-20372965 | None:intergenic | 40.0% | |
| ! | AAACTTACAATGTGGCTTGG+TGG | - | chr8_3:20372984-20373003 | None:intergenic | 40.0% |
| !! | TGGGTGGGTATCTTTGATTT+TGG | - | chr8_3:20373034-20373053 | None:intergenic | 40.0% |
| TGCTTTATGCCTTCCAAAAG+AGG | + | chr8_3:20373282-20373301 | Msa1281130:intron | 40.0% | |
| ! | CCCAACTTTTGTTCCTCTTT+TGG | - | chr8_3:20373298-20373317 | None:intergenic | 40.0% |
| ! | AGTTGGGTTTGAGTCTTTTG+GGG | + | chr8_3:20373311-20373330 | Msa1281130:intron | 40.0% |
| !! | TTTGAGTCTTTTGGGGAAAG+AGG | + | chr8_3:20373318-20373337 | Msa1281130:intron | 40.0% |
| TTTGGGGAAAGAGGAAAACA+AGG | + | chr8_3:20373327-20373346 | Msa1281130:intron | 40.0% | |
| TTAAGAAGTGATATGGTCGG+CGG | + | chr8_3:20373427-20373446 | Msa1281130:intron | 40.0% | |
| !!! | TTTGCTGGTTTTAGGGGAAA+TGG | + | chr8_3:20373520-20373539 | Msa1281130:intron | 40.0% |
| !! | GAAATGGTCGGTTAGTTTCT+TGG | + | chr8_3:20373536-20373555 | Msa1281130:intron | 40.0% |
| ACATAAAGCAGGAAAGGCTA+TGG | - | chr8_3:20373899-20373918 | None:intergenic | 40.0% | |
| TGGTCAACATAAAGCAGGAA+AGG | - | chr8_3:20373905-20373924 | None:intergenic | 40.0% | |
| CAATGTGGTCAACATAAAGC+AGG | - | chr8_3:20373910-20373929 | None:intergenic | 40.0% | |
| ! | GGGTGTTTGAGTTCAATACT+TGG | + | chr8_3:20374113-20374132 | Msa1281130:intron | 40.0% |
| CATAGGGATTACAAACACGT+AGG | - | chr8_3:20374140-20374159 | None:intergenic | 40.0% | |
| TCCCTATGCCCTCAAATAAT+TGG | + | chr8_3:20374152-20374171 | Msa1281130:intron | 40.0% | |
| ! | GACCAATTATTTGAGGGCAT+AGG | - | chr8_3:20374157-20374176 | None:intergenic | 40.0% |
| AACTAACATCTCGAGGTTGA+AGG | - | chr8_3:20374304-20374323 | None:intergenic | 40.0% | |
| GCTAACGACTGCTCTTAATT+AGG | + | chr8_3:20374548-20374567 | Msa1281130:intron | 40.0% | |
| ATAAAAAATAGGACCTGGGC+TGG | - | chr8_3:20375392-20375411 | None:intergenic | 40.0% | |
| ACCAAACCAAAACCCTCAAA+AGG | + | chr8_3:20375726-20375745 | Msa1281130:intron | 40.0% | |
| !!! | TCCTTTTGAGGGTTTTGGTT+TGG | - | chr8_3:20375730-20375749 | None:intergenic | 40.0% |
| TTTCTATAACACTCGCTCCA+CGG | - | chr8_3:20375844-20375863 | None:intergenic | 40.0% | |
| GGAGCGAGTGTTATAGAAAT+TGG | + | chr8_3:20375845-20375864 | Msa1281130:intron | 40.0% | |
| TTAGTAGCTATATGGGTCTC+CGG | + | chr8_3:20376015-20376034 | Msa1281130:intron | 40.0% | |
| GTACTTCATATGTAGCTAGG+TGG | - | chr8_3:20376248-20376267 | None:intergenic | 40.0% | |
| ! | GAGGTACTTCATATGTAGCT+AGG | - | chr8_3:20376251-20376270 | None:intergenic | 40.0% |
| CAAGTCATATGTATCTGGCA+TGG | - | chr8_3:20376346-20376365 | None:intergenic | 40.0% | |
| AAGTACCCCAAACTTCATCA+TGG | + | chr8_3:20376379-20376398 | Msa1281130:CDS | 40.0% | |
| AGTACCCCAAACTTCATCAT+GGG | + | chr8_3:20376380-20376399 | Msa1281130:CDS | 40.0% | |
| ATGACCCATGATGAAGTTTG+GGG | - | chr8_3:20376387-20376406 | None:intergenic | 40.0% | |
| CATGACCCATGATGAAGTTT+GGG | - | chr8_3:20376388-20376407 | None:intergenic | 40.0% | |
| ! | ATGTGCCACTACCCAAATAT+TGG | - | chr8_3:20376434-20376453 | None:intergenic | 40.0% |
| TCATCCACTAGCAATAATGG+TGG | + | chr8_3:20376453-20376472 | Msa1281130:CDS | 40.0% | |
| ATCACCACCATTATTGCTAG+TGG | - | chr8_3:20376460-20376479 | None:intergenic | 40.0% | |
| GGAAAGAGAATGAGATGATG+GGG | - | chr8_3:20376550-20376569 | None:intergenic | 40.0% | |
| AAAACTTGCATGCGCCACAA+GGG | - | chr8_3:20372210-20372229 | None:intergenic | 45.0% | |
| AAAAACTTGCATGCGCCACA+AGG | - | chr8_3:20372211-20372230 | None:intergenic | 45.0% | |
| !! | GCGCATGCAAGTTTTTGAGA+AGG | + | chr8_3:20372215-20372234 | Msa1281130:CDS | 45.0% |
| ! | TTGAGAAGGAAGTGTATCCC+GGG | + | chr8_3:20372229-20372248 | Msa1281130:CDS | 45.0% |
| AAGGCGCAAAAATACATCCC+GGG | - | chr8_3:20372249-20372268 | None:intergenic | 45.0% | |
| ! | CAGCGGTTCACAAGGTTTTT+GGG | + | chr8_3:20372302-20372321 | Msa1281130:CDS | 45.0% |
| ! | AGCGGTTCACAAGGTTTTTG+GGG | + | chr8_3:20372303-20372322 | Msa1281130:CDS | 45.0% |
| TGAGCAACACAACCAAAGAC+GGG | - | chr8_3:20372427-20372446 | None:intergenic | 45.0% | |
| TTTGTTCCATGGCTCTTTGC+AGG | - | chr8_3:20373360-20373379 | None:intergenic | 45.0% | |
| TGCAAAGAGCCATGGAACAA+AGG | + | chr8_3:20373359-20373378 | Msa1281130:intron | 45.0% | |
| GCAAAGAGCCATGGAACAAA+GGG | + | chr8_3:20373360-20373379 | Msa1281130:intron | 45.0% | |
| CAAAGAGCCATGGAACAAAG+GGG | + | chr8_3:20373361-20373380 | Msa1281130:intron | 45.0% | |
| AAACTGTCCCCTTTGTTCCA+TGG | - | chr8_3:20373371-20373390 | None:intergenic | 45.0% | |
| TCGGCGGTTACACATATGTA+TGG | + | chr8_3:20373443-20373462 | Msa1281130:intron | 45.0% | |
| !!! | CTGGTTTTAGGGGAAATGGT+CGG | + | chr8_3:20373524-20373543 | Msa1281130:intron | 45.0% |
| !! | TCGGTTAGTTTCTTGGGCTT+TGG | + | chr8_3:20373543-20373562 | Msa1281130:intron | 45.0% |
| ! | CACAATTTAGGGCAGATTGC+CGG | - | chr8_3:20373740-20373759 | None:intergenic | 45.0% |
| ! | AAGGGTCTGCGCTTTTACAT+GGG | - | chr8_3:20374411-20374430 | None:intergenic | 45.0% |
| ! | AAAGGGTCTGCGCTTTTACA+TGG | - | chr8_3:20374412-20374431 | None:intergenic | 45.0% |
| ACAAGTTATAAGAGCAGGGG+CGG | + | chr8_3:20375333-20375352 | Msa1281130:intron | 45.0% | |
| !!! | AACTCACGCAGGGGTATTTT+CGG | - | chr8_3:20375463-20375482 | None:intergenic | 45.0% |
| TTCTATAACACTCGCTCCAC+GGG | - | chr8_3:20375843-20375862 | None:intergenic | 45.0% | |
| TCAATGTCCTTCTGCATCAC+CGG | + | chr8_3:20375963-20375982 | Msa1281130:intron | 45.0% | |
| ! | CTTTTCAATGTCGTTGGGGT+GGG | - | chr8_3:20376048-20376067 | None:intergenic | 45.0% |
| ! | TCTTTTCAATGTCGTTGGGG+TGG | - | chr8_3:20376049-20376068 | None:intergenic | 45.0% |
| GCAGAACTCTCCTACTTACA+AGG | + | chr8_3:20376222-20376241 | Msa1281130:CDS | 45.0% | |
| TATCTGGCATGGCTGAAGAA+GGG | - | chr8_3:20376335-20376354 | None:intergenic | 45.0% | |
| GCATGACCCATGATGAAGTT+TGG | - | chr8_3:20376389-20376408 | None:intergenic | 45.0% | |
| AAATATTGGCGGGGCTCATT+GGG | - | chr8_3:20376420-20376439 | None:intergenic | 45.0% | |
| AATGAGCCCCGCCAATATTT+GGG | + | chr8_3:20376420-20376439 | Msa1281130:CDS | 45.0% | |
| TGCCACTACCCAAATATTGG+CGG | - | chr8_3:20376431-20376450 | None:intergenic | 45.0% | |
| ! | TGGTGGTGATCTTCAAGCAT+TGG | + | chr8_3:20376470-20376489 | Msa1281130:CDS | 45.0% |
| !!! | AAAAAAGAAATATTAATTTT+AGG | - | chr8_3:20376178-20376197 | None:intergenic | 5.0% |
| ! | AACTCAGGTTGTAGCGGTAG+TGG | + | chr8_3:20372148-20372167 | Msa1281130:CDS | 50.0% |
| CCTTGCTCCGAATCGAAGTA+AGG | - | chr8_3:20372268-20372287 | None:intergenic | 50.0% | |
| !! | CCTTACTTCGATTCGGAGCA+AGG | + | chr8_3:20372265-20372284 | Msa1281130:CDS | 50.0% |
| ACATTTCGCAGCGGTTCACA+AGG | + | chr8_3:20372294-20372313 | Msa1281130:CDS | 50.0% | |
| ! | GCAGCGGTTCACAAGGTTTT+TGG | + | chr8_3:20372301-20372320 | Msa1281130:CDS | 50.0% |
| GCATCAAGACGCTTGTGTAC+CGG | - | chr8_3:20372361-20372380 | None:intergenic | 50.0% | |
| GGTACACAAGCGTCTTGATG+CGG | + | chr8_3:20372360-20372379 | Msa1281130:CDS | 50.0% | |
| AGGTTGAGAGATCCCGTCTT+TGG | + | chr8_3:20372412-20372431 | Msa1281130:CDS | 50.0% | |
| ATAGGTCCTGCAAAGAGCCA+TGG | + | chr8_3:20373351-20373370 | Msa1281130:intron | 50.0% | |
| CGGCAATCTGCCCTAAATTG+TGG | + | chr8_3:20373738-20373757 | Msa1281130:intron | 50.0% | |
| ! | GTTCGAGCGAAAAGTGCAGA+AGG | - | chr8_3:20375428-20375447 | None:intergenic | 50.0% |
| AGGTTATGCTCAACCACCCT+TGG | + | chr8_3:20375812-20375831 | Msa1281130:intron | 50.0% | |
| GGTTATGCTCAACCACCCTT+GGG | + | chr8_3:20375813-20375832 | Msa1281130:intron | 50.0% | |
| CAATGTCCTTCTGCATCACC+GGG | + | chr8_3:20375964-20375983 | Msa1281130:intron | 50.0% | |
| !! | AGCTAGGTGGCCTTGTAAGT+AGG | - | chr8_3:20376235-20376254 | None:intergenic | 50.0% |
| !! | ATTGGAAGTGCTTGTGGTGG+AGG | - | chr8_3:20376285-20376304 | None:intergenic | 50.0% |
| TCCACCACAAGCACTTCCAA+TGG | + | chr8_3:20376284-20376303 | Msa1281130:CDS | 50.0% | |
| !! | ACCATTGGAAGTGCTTGTGG+TGG | - | chr8_3:20376288-20376307 | None:intergenic | 50.0% |
| !! | GAGACCATTGGAAGTGCTTG+TGG | - | chr8_3:20376291-20376310 | None:intergenic | 50.0% |
| ! | AGGTTGGCTAGTGAGACCAT+TGG | - | chr8_3:20376303-20376322 | None:intergenic | 50.0% |
| TGGCTGAAGAAGGGGCTAAT+GGG | - | chr8_3:20376326-20376345 | None:intergenic | 50.0% | |
| ATGGCTGAAGAAGGGGCTAA+TGG | - | chr8_3:20376327-20376346 | None:intergenic | 50.0% | |
| ATCTGGCATGGCTGAAGAAG+GGG | - | chr8_3:20376334-20376353 | None:intergenic | 50.0% | |
| GTATCTGGCATGGCTGAAGA+AGG | - | chr8_3:20376336-20376355 | None:intergenic | 50.0% | |
| CAAATATTGGCGGGGCTCAT+TGG | - | chr8_3:20376421-20376440 | None:intergenic | 50.0% | |
| CAATGAGCCCCGCCAATATT+TGG | + | chr8_3:20376419-20376438 | Msa1281130:CDS | 50.0% | |
| CCACTACCCAAATATTGGCG+GGG | - | chr8_3:20376429-20376448 | None:intergenic | 50.0% | |
| GCCACTACCCAAATATTGGC+GGG | - | chr8_3:20376430-20376449 | None:intergenic | 50.0% | |
| GCATCAGAGCATGCAACATG+AGG | - | chr8_3:20376528-20376547 | None:intergenic | 50.0% | |
| ! | TGTAGCGGTAGTGGTTGCAG+TGG | + | chr8_3:20372157-20372176 | Msa1281130:CDS | 55.0% |
| AGGCGCTTCACATTTCGCAG+CGG | + | chr8_3:20372285-20372304 | Msa1281130:CDS | 55.0% | |
| !! | AGGGCAGATTGCCGGTTTGA+TGG | - | chr8_3:20373732-20373751 | None:intergenic | 55.0% |
| !! | AAATAGGACCTGGGCTGGTG+TGG | - | chr8_3:20375387-20375406 | None:intergenic | 55.0% |
| GCGTGAGTTAACTCACGCAG+GGG | - | chr8_3:20375472-20375491 | None:intergenic | 55.0% | |
| CGCGTGAGTTAACTCACGCA+GGG | - | chr8_3:20375473-20375492 | None:intergenic | 55.0% | |
| CCTGCGTGAGTTAACTCACG+CGG | + | chr8_3:20375471-20375490 | Msa1281130:intron | 55.0% | |
| CTGCGTGAGTTAACTCACGC+GGG | + | chr8_3:20375472-20375491 | Msa1281130:intron | 55.0% | |
| ! | AGTGCTTGTGGTGGAGGTGT+TGG | - | chr8_3:20376279-20376298 | None:intergenic | 55.0% |
| AGAAGGGGCTAATGGGAGGT+TGG | - | chr8_3:20376319-20376338 | None:intergenic | 55.0% | |
| CTGAAGAAGGGGCTAATGGG+AGG | - | chr8_3:20376323-20376342 | None:intergenic | 55.0% | |
| CCCCGCCAATATTTGGGTAG+TGG | + | chr8_3:20376426-20376445 | Msa1281130:CDS | 55.0% | |
| ! | AGCGGTAGTGGTTGCAGTGG+CGG | + | chr8_3:20372160-20372179 | Msa1281130:CDS | 60.0% |
| !! | AGTGGCGGTGGTGGAAACAG+CGG | + | chr8_3:20372175-20372194 | Msa1281130:CDS | 60.0% |
| GGTGGAAACAGCGGTGCTTG+TGG | + | chr8_3:20372184-20372203 | Msa1281130:CDS | 60.0% | |
| CCGCGTGAGTTAACTCACGC+AGG | - | chr8_3:20375474-20375493 | None:intergenic | 60.0% | |
| CGTTGGGGTGGGAAATGTGC+CGG | - | chr8_3:20376037-20376056 | None:intergenic | 60.0% | |
| !! | GGTGGAGGTGTTGGTGGTTG+AGG | - | chr8_3:20376270-20376289 | None:intergenic | 60.0% |
| !! | GCTTGTGGTGGAGGTGTTGG+TGG | - | chr8_3:20376276-20376295 | None:intergenic | 60.0% |
| ! | GGTAGTGGTTGCAGTGGCGG+TGG | + | chr8_3:20372163-20372182 | Msa1281130:CDS | 65.0% |
| AGTGGTTGCAGTGGCGGTGG+TGG | + | chr8_3:20372166-20372185 | Msa1281130:CDS | 65.0% | |
| AGCGGTGCTTGTGGCCCTTG+TGG | + | chr8_3:20372193-20372212 | Msa1281130:CDS | 65.0% | |
| GGCAATAGCCACACCAGCCC+AGG | + | chr8_3:20375376-20375395 | Msa1281130:intron | 65.0% | |
| ACCACCCTTGGGTTCACCCG+TGG | + | chr8_3:20375824-20375843 | Msa1281130:intron | 65.0% | |
| TCCACGGGTGAACCCAAGGG+TGG | - | chr8_3:20375828-20375847 | None:intergenic | 65.0% | |
| CGCTCCACGGGTGAACCCAA+GGG | - | chr8_3:20375831-20375850 | None:intergenic | 65.0% | |
| TCGCTCCACGGGTGAACCCA+AGG | - | chr8_3:20375832-20375851 | None:intergenic | 65.0% | |
| CCTTCTGCATCACCGGGCAG+CGG | + | chr8_3:20375970-20375989 | Msa1281130:intron | 65.0% | |
| AGCAGGGGCGGACCTGAGCA+GGG | + | chr8_3:20375345-20375364 | Msa1281130:intron | 70.0% | |
| GACCTGAGCAGGGCAGGGTG+TGG | + | chr8_3:20375355-20375374 | Msa1281130:intron | 70.0% | |
| TGCCACACCCTGCCCTGCTC+AGG | - | chr8_3:20375360-20375379 | None:intergenic | 70.0% | |
| CCGCTGCCCGGTGATGCAGA+AGG | - | chr8_3:20375973-20375992 | None:intergenic | 70.0% | |
| GTTCCTCCTGCACCGCTGCC+CGG | - | chr8_3:20375985-20376004 | None:intergenic | 70.0% | |
| GAGCAGGGGCGGACCTGAGC+AGG | + | chr8_3:20375344-20375363 | Msa1281130:intron | 75.0% | |
| GGGCGGACCTGAGCAGGGCA+GGG | + | chr8_3:20375350-20375369 | Msa1281130:intron | 75.0% | |
| GCATCACCGGGCAGCGGTGC+AGG | + | chr8_3:20375976-20375995 | Msa1281130:intron | 75.0% | |
| TCACCGGGCAGCGGTGCAGG+AGG | + | chr8_3:20375979-20375998 | Msa1281130:intron | 75.0% | |
| ! | GGGGCGGACCTGAGCAGGGC+AGG | + | chr8_3:20375349-20375368 | Msa1281130:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 20372139 | 20376575 | 20372139 | ID=Msa1281130;Name=Msa1281130 |
| chr8_3 | mRNA | 20372139 | 20376575 | 20372139 | ID=Msa1281130-mRNA-1;Parent=Msa1281130;Name=Msa1281130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|232 |
| chr8_3 | exon | 20372139 | 20372468 | 20372139 | ID=Msa1281130-mRNA-1:exon:7485;Parent=Msa1281130-mRNA-1 |
| chr8_3 | exon | 20376207 | 20376575 | 20376207 | ID=Msa1281130-mRNA-1:exon:7486;Parent=Msa1281130-mRNA-1 |
| chr8_3 | CDS | 20372139 | 20372468 | 20372139 | ID=Msa1281130-mRNA-1:cds;Parent=Msa1281130-mRNA-1 |
| chr8_3 | CDS | 20376207 | 20376575 | 20376207 | ID=Msa1281130-mRNA-1:cds;Parent=Msa1281130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
