AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1460310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460310 MtrunA17_Chr2g0329451 98.480 329 5 0 1 329 1 329 0.0 659
Msa1460310 MtrunA17_Chr4g0033631 89.752 322 33 0 7 328 8 329 0.0 594
Msa1460310 MtrunA17_Chr1g0188291 67.089 316 104 0 14 329 8 323 8.30e-160 449
Msa1460310 MtrunA17_Chr5g0434971 67.492 323 103 2 5 325 57 379 7.83e-153 434
Msa1460310 MtrunA17_Chr6g0474331 62.617 321 118 1 9 327 23 343 2.69e-150 426
Msa1460310 MtrunA17_Chr1g0204101 63.385 325 113 2 8 326 13 337 1.14e-148 421
Msa1460310 MtrunA17_Chr1g0183241 50.789 317 133 4 12 326 108 403 2.71e-101 303
Msa1460310 MtrunA17_Chr1g0183661 49.650 286 130 4 29 312 3 276 2.11e-94 282
Msa1460310 MtrunA17_Chr1g0171921 47.988 323 155 6 12 327 181 497 9.99e-94 288
Msa1460310 MtrunA17_Chr1g0177771 47.692 325 151 6 4 325 244 552 3.05e-93 288
Msa1460310 MtrunA17_Chr1g0177321 45.538 325 149 6 4 325 170 469 2.50e-86 267
Msa1460310 MtrunA17_Chr7g0246421 55.729 192 83 2 138 327 2 193 4.76e-68 211
Msa1460310 MtrunA17_Chr1g0176221 46.552 232 95 2 94 325 4 206 1.13e-63 201
Msa1460310 MtrunA17_Chr4g0008441 32.698 367 200 4 7 326 86 452 1.77e-53 182
Msa1460310 MtrunA17_Chr5g0419371 32.686 309 183 5 40 326 250 555 5.15e-50 175
Msa1460310 MtrunA17_Chr7g0246411 57.692 130 53 1 14 141 41 170 3.74e-47 157
Msa1460310 MtrunA17_Chr4g0020911 52.632 133 61 1 139 269 57 189 9.68e-41 141
Msa1460310 MtrunA17_Chr2g0314311 27.055 292 181 9 45 327 89 357 3.23e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460310 AT3G59480.1 82.927 328 52 1 1 328 1 324 0.0 559
Msa1460310 AT2G31390.1 83.228 316 53 0 13 328 8 323 0.0 545
Msa1460310 AT1G06030.1 79.878 328 63 1 1 328 1 325 0.0 544
Msa1460310 AT1G06020.1 79.573 328 63 1 1 328 1 324 0.0 541
Msa1460310 AT4G10260.1 68.868 318 99 0 12 329 4 321 1.60e-160 451
Msa1460310 AT1G66430.1 64.286 322 113 2 3 323 55 375 2.53e-152 433
Msa1460310 AT5G51830.2 65.094 318 109 1 14 329 23 340 1.19e-148 422
Msa1460310 AT5G51830.1 65.094 318 109 1 14 329 23 340 1.19e-148 422
Msa1460310 AT1G50390.1 61.176 170 37 1 159 328 1 141 3.08e-66 205
Msa1460310 AT3G54090.1 33.243 367 197 6 7 326 96 461 7.41e-54 183
Msa1460310 AT1G69200.1 31.250 288 176 3 40 306 246 532 2.00e-42 155
Msa1460310 AT1G17160.1 27.425 299 175 10 45 328 105 376 2.25e-15 76.6
Msa1460310 AT1G06730.1 25.839 298 198 8 46 329 132 420 9.00e-15 75.5

Find 123 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATATAAAGGAATGTATTT+TGG 0.133523 tig0040835:-11521 Msa1460310:intergenic
AAAACTCCCTAAACATTATT+TGG 0.172265 tig0040835:-14528 Msa1460310:intergenic
GACTTTGTCCCAACTGTTTC+CGG 0.182064 tig0040835:+11871 Msa1460310:CDS
ACAAGGAGCAACTTCAAATT+TGG 0.187281 tig0040835:-13784 Msa1460310:intergenic
TTCCTTTGTTGGTGCTTTAT+TGG 0.217574 tig0040835:+14029 Msa1460310:CDS
GAATAAAATTACTAAAATTA+AGG 0.222135 tig0040835:-11604 Msa1460310:intergenic
GAGAAGGCAGCCAGCTTCTT+TGG 0.228047 tig0040835:-13590 Msa1460310:intergenic
TGTGCTAATGATTGTGAAAT+AGG 0.236332 tig0040835:-14717 Msa1460310:intergenic
AGCAATCACAACTACTAAAA+AGG 0.271618 tig0040835:+14303 Msa1460310:CDS
GCAAGCAAATACTGAGTATC+TGG 0.286211 tig0040835:+13665 Msa1460310:CDS
ATCAAAATCACTGCCGAGTT+TGG 0.297128 tig0040835:+14505 Msa1460310:three_prime_UTR
AAATTAACATAGATATAATA+TGG 0.307153 tig0040835:-14601 Msa1460310:intergenic
AATAAAATTACTAAAATTAA+GGG 0.307392 tig0040835:-11603 Msa1460310:intergenic
AGTTTGGCCAAATAATGTTT+AGG 0.322917 tig0040835:+14521 Msa1460310:three_prime_UTR
CTAAGCACTTACTTCTAATA+TGG 0.330358 tig0040835:-14073 Msa1460310:intergenic
AGTTCGAGGTTGAGTTCTTC+AGG 0.330827 tig0040835:-12183 Msa1460310:intergenic
CATGCTCGTCGGGATCTTAA+AGG 0.337842 tig0040835:+12026 Msa1460310:CDS
TGGCTCCACAATCAAGCTTA+TGG 0.338825 tig0040835:-13533 Msa1460310:intergenic
ACTTTGTCCCAACTGTTTCC+GGG 0.348465 tig0040835:+11872 Msa1460310:CDS
GTTTGGCCAAATAATGTTTA+GGG 0.350000 tig0040835:+14522 Msa1460310:three_prime_UTR
GCCATCGCTGTTTCCCGATT+AGG 0.356581 tig0040835:+11955 Msa1460310:CDS
TAGTGCAAAAGAAAATAATT+AGG 0.356811 tig0040835:+14674 Msa1460310:three_prime_UTR
AAAAGAAGTAAATGATATAA+AGG 0.370338 tig0040835:-11533 Msa1460310:intergenic
AGGCAGCTTTGCCTCCTAAT+CGG 0.387773 tig0040835:-11969 Msa1460310:intergenic
GGTGCCGGTGATTCCTTTGT+TGG 0.398386 tig0040835:+14018 Msa1460310:CDS
TCGTGGTAAATATTTATAGA+AGG 0.400969 tig0040835:-11690 Msa1460310:intergenic
GGCCAAGATTGTTGATGATC+AGG 0.401747 tig0040835:+14050 Msa1460310:CDS
GACGTTCGCTGGTGCACCGC+CGG 0.406668 tig0040835:-11932 Msa1460310:intergenic
CCAAGGTGCACGTACTGCTT+TGG 0.410980 tig0040835:+12083 Msa1460310:CDS
GCCGGGAGCTTTGAGAAAAC+CGG 0.420639 tig0040835:-11914 Msa1460310:intergenic
GTCAATACAGTTGATACAAC+TGG 0.425906 tig0040835:+13997 Msa1460310:CDS
TTGCGAGCTTCTTCCGCTGA+GGG 0.429226 tig0040835:-13646 Msa1460310:intergenic
GTGAAATAGGTAAGATCTAC+TGG 0.429957 tig0040835:-14704 Msa1460310:intergenic
CACAGTGGTAGGCGGAGGTT+AGG 0.430184 tig0040835:-13622 Msa1460310:intergenic
AAGTTGCTCCTTGTCACTCT+TGG 0.431035 tig0040835:+13793 Msa1460310:CDS
CACAATCATTAGCACAAGAA+AGG 0.433448 tig0040835:+14724 Msa1460310:three_prime_UTR
CTTGTCACTCTTGGTGAACA+TGG 0.436126 tig0040835:+13802 Msa1460310:CDS
CAAGGAGCAACTTCAAATTT+GGG 0.437763 tig0040835:-13783 Msa1460310:intergenic
GGCAGCTTTGCCTCCTAATC+GGG 0.442724 tig0040835:-11968 Msa1460310:intergenic
CAGGAATCTATGCTTTGATC+AGG 0.443006 tig0040835:-14366 Msa1460310:intergenic
ATGTAGATCAGCACACTTGA+AGG 0.450810 tig0040835:+13555 Msa1460310:CDS
ACAGCGATGGCGACGTTCGC+TGG 0.452557 tig0040835:-11943 Msa1460310:intergenic
ACGTTCGCTGGTGCACCGCC+GGG 0.457893 tig0040835:-11931 Msa1460310:intergenic
TTCAGTACATCCTCCTCCTT+GGG 0.459048 tig0040835:-14343 Msa1460310:intergenic
GTTCAGTACATCCTCCTCCT+TGG 0.459298 tig0040835:-14344 Msa1460310:intergenic
GCTGCCTTCGTCGGGAAACT+AGG 0.459666 tig0040835:+11985 Msa1460310:CDS
CCGCTGAGGGCCACAGTGGT+AGG 0.460757 tig0040835:-13633 Msa1460310:intergenic
GTCTCCCTTGCAGAAGCCCC+CGG 0.460901 tig0040835:+11895 Msa1460310:CDS
GGCCTGATCATCAACAATCT+TGG 0.466456 tig0040835:-14052 Msa1460310:intergenic
ACTGGTCTCATCGTCAGCTT+CGG 0.467497 tig0040835:+11835 Msa1460310:CDS
TCCTCCTCCTTGGGAAGAGC+AGG 0.469695 tig0040835:-14334 Msa1460310:intergenic
GAGGCAAAGCTGCCTTCGTC+GGG 0.469972 tig0040835:+11977 Msa1460310:CDS
TAGGCGGAGGTTAGGATCAT+AGG 0.483812 tig0040835:-13614 Msa1460310:intergenic
CCGGGAGCTTTGAGAAAACC+GGG 0.487608 tig0040835:-11913 Msa1460310:intergenic
AATGAGCTGGAGTTCCTGAC+TGG 0.488918 tig0040835:+13718 Msa1460310:CDS
GGAAAGAAAAGTAAATATGC+AGG 0.493681 tig0040835:-14385 Msa1460310:intergenic
TTAAGAAGCATGTCAGCACT+TGG 0.493995 tig0040835:-12159 Msa1460310:intergenic
ATAGGTAAGATCTACTGGTT+GGG 0.494296 tig0040835:-14699 Msa1460310:intergenic
AGTTCGGTCACATGCTCGTC+GGG 0.494876 tig0040835:+12016 Msa1460310:CDS
CTTGCGAGCTTCTTCCGCTG+AGG 0.497527 tig0040835:-13647 Msa1460310:intergenic
TAAATATTTATAGAAGGAGT+TGG 0.502281 tig0040835:-11684 Msa1460310:intergenic
GGAAAAGGCTGATTTGATCA+AGG 0.504055 tig0040835:+13687 Msa1460310:CDS
GGCTTCTGCAAGGGAGACCC+CGG 0.504829 tig0040835:-11890 Msa1460310:intergenic
CAAGAGCAACTCCAATGAAA+AGG 0.504859 tig0040835:-14419 Msa1460310:intergenic
AATACTGAGTATCTGGGAAA+AGG 0.509401 tig0040835:+13672 Msa1460310:CDS
GGAGGCAAAGCTGCCTTCGT+CGG 0.509809 tig0040835:+11976 Msa1460310:CDS
ATGGAAGTTGCCAAAGAAGC+TGG 0.510846 tig0040835:+13580 Msa1460310:CDS
TGAGACCAGTGCCTGTGGTT+GGG 0.512647 tig0040835:-11822 Msa1460310:intergenic
AAACTAGGCGATGACGAGTT+CGG 0.513562 tig0040835:+12000 Msa1460310:CDS
CATAAACTCACGCTCTCCAT+CGG 0.515761 tig0040835:-12124 Msa1460310:intergenic
ATGCTACTGCTTTGACATTG+TGG 0.517687 tig0040835:+13758 Msa1460310:CDS
GGCATCCCAACCACAGGCAC+TGG 0.519828 tig0040835:+11817 Msa1460310:CDS
AAACATTATTTGGCCAAACT+CGG 0.526517 tig0040835:-14518 Msa1460310:intergenic
GGGAGACCCCGGAAACAGTT+GGG 0.528224 tig0040835:-11879 Msa1460310:intergenic
GTACAGATCTGATGAGTTCG+AGG 0.528295 tig0040835:-12197 Msa1460310:intergenic
AAACCACTCAGTCAAACAAT+CGG 0.530464 tig0040835:-14634 Msa1460310:intergenic
GTCGGGATCTTAAAGGAAAA+CGG 0.531500 tig0040835:+12033 Msa1460310:CDS
ACTTCAATGGCTTCAAGCAA+TGG 0.538580 tig0040835:+11796 Msa1460310:exon
ATCGCTGTTTCCCGATTAGG+AGG 0.542152 tig0040835:+11958 Msa1460310:CDS
AGAAGGAGTTGGTAGAGAGA+AGG 0.542899 tig0040835:-11673 Msa1460310:intergenic
TCCTGCTCTTCCCAAGGAGG+AGG 0.543892 tig0040835:+14333 Msa1460310:CDS
AGGGCCACAGTGGTAGGCGG+AGG 0.545092 tig0040835:-13627 Msa1460310:intergenic
AATAGGTAAGATCTACTGGT+TGG 0.546877 tig0040835:-14700 Msa1460310:intergenic
CAAGGTTAGTGATAATGAGC+TGG 0.551346 tig0040835:+13705 Msa1460310:CDS
CAAGCAAATACTGAGTATCT+GGG 0.559518 tig0040835:+13666 Msa1460310:CDS
TTCAAGTGTGCTGATCTACA+TGG 0.561390 tig0040835:-13553 Msa1460310:intergenic
TCAAGCTTATGGATCCATAG+TGG 0.562307 tig0040835:-13522 Msa1460310:intergenic
CTTTGTCCCAACTGTTTCCG+GGG 0.562958 tig0040835:+11873 Msa1460310:CDS
AGGGAGACCCCGGAAACAGT+TGG 0.563390 tig0040835:-11880 Msa1460310:intergenic
AGCACCAACAAAGGAATCAC+CGG 0.564007 tig0040835:-14022 Msa1460310:intergenic
ATCAGCACACTTGAAGGCAA+TGG 0.564340 tig0040835:+13561 Msa1460310:CDS
GGTTAGGATCATAGGAGAGA+AGG 0.565489 tig0040835:-13606 Msa1460310:intergenic
AGCAATTCCTGCTCTTCCCA+AGG 0.570369 tig0040835:+14327 Msa1460310:CDS
TGGATCCATAAGCTTGATTG+TGG 0.577549 tig0040835:+13528 Msa1460310:CDS
GAGTTCGGTCACATGCTCGT+CGG 0.579094 tig0040835:+12015 Msa1460310:CDS
ACAGTTGATACAACTGGTGC+CGG 0.581263 tig0040835:+14003 Msa1460310:CDS
AGAGAGGAGATACAAGAATG+AGG 0.581860 tig0040835:-11714 Msa1460310:intergenic
GAAAACGGTGTGGTCGCAGA+AGG 0.582324 tig0040835:+12048 Msa1460310:CDS
TCCTAATCGGGAAACAGCGA+TGG 0.585587 tig0040835:-11956 Msa1460310:intergenic
AGTACGTGCACCTTGGTCAA+AGG 0.592226 tig0040835:-12076 Msa1460310:intergenic
CCAAAGCAGTACGTGCACCT+TGG 0.592587 tig0040835:-12083 Msa1460310:intergenic
ATGAGACCAGTGCCTGTGGT+TGG 0.592790 tig0040835:-11823 Msa1460310:intergenic
AGATACAAGAATGAGGTTCG+TGG 0.597856 tig0040835:-11707 Msa1460310:intergenic
TGTCCGATTGTTTGACTGAG+TGG 0.598099 tig0040835:+14631 Msa1460310:three_prime_UTR
CTCAAGTTTGCAAATGCATG+TGG 0.598828 tig0040835:+14280 Msa1460310:CDS
ATCGCCTAGTTTCCCGACGA+AGG 0.599330 tig0040835:-11989 Msa1460310:intergenic
AGCAATGGCATCCCAACCAC+AGG 0.606388 tig0040835:+11811 Msa1460310:CDS
GGCCAATAAAGCACCAACAA+AGG 0.608161 tig0040835:-14031 Msa1460310:intergenic
TTTGTTACTCTACGCGCCGA+TGG 0.610292 tig0040835:+12108 Msa1460310:CDS
CTGAGGGCCACAGTGGTAGG+CGG 0.610577 tig0040835:-13630 Msa1460310:intergenic
CATGTTCACCAAGAGTGACA+AGG 0.619134 tig0040835:-13801 Msa1460310:intergenic
GAGCAACTCCAATGAAAAGG+TGG 0.622957 tig0040835:-14416 Msa1460310:intergenic
GAAGGTATAACCTTTGACCA+AGG 0.632928 tig0040835:+12066 Msa1460310:CDS
GGGAGCTTTGAGAAAACCGG+GGG 0.651383 tig0040835:-11911 Msa1460310:intergenic
GACGATGAGACCAGTGCCTG+TGG 0.653048 tig0040835:-11827 Msa1460310:intergenic
CCTACCACTGTGGCCCTCAG+CGG 0.657292 tig0040835:+13633 Msa1460310:CDS
TCAGTCAAACAATCGGACAC+AGG 0.658052 tig0040835:-14627 Msa1460310:intergenic
AATTCCTGCTCTTCCCAAGG+AGG 0.668223 tig0040835:+14330 Msa1460310:CDS
CGGGAGCTTTGAGAAAACCG+GGG 0.680003 tig0040835:-11912 Msa1460310:intergenic
TCTTCCGCTGAGGGCCACAG+TGG 0.686880 tig0040835:-13637 Msa1460310:intergenic
GATCTTAAAGGAAAACGGTG+TGG 0.740295 tig0040835:+12038 Msa1460310:CDS
CTAACCTCCGCCTACCACTG+TGG 0.743836 tig0040835:+13623 Msa1460310:CDS
TGGCGCAAGATACTACACCA+AGG 0.783785 tig0040835:+13822 Msa1460310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAAATTACTAAAATTA+AGG - tig0040835:11607-11626 Msa1460310:intergenic 10.0%
!! AAATTAACATAGATATAATA+TGG - tig0040835:14604-14623 Msa1460310:intergenic 10.0%
!! AAAAGAAGTAAATGATATAA+AGG - tig0040835:11536-11555 Msa0013800:intergenic 15.0%
!! GAAAAATAAACAAAATGATT+TGG - tig0040835:11566-11585 Msa0013800:intergenic 15.0%
!!! TTGTTTATTTTTCGAATTAA+TGG + tig0040835:11573-11592 Msa1460310:five_prime_UTR 15.0%
!! TTCATGAAAATCATAAAAAA+GGG - tig0040835:11634-11653 Msa1460310:intergenic 15.0%
!! ATTCATGAAAATCATAAAAA+AGG - tig0040835:11635-11654 Msa1460310:intergenic 15.0%
!! TTACTATATGGTAAATAAAT+TGG + tig0040835:12631-12650 Msa1460310:intron 15.0%
!! TCTAGAAAAATAAAAAGAAT+TGG - tig0040835:13214-13233 Msa1460310:intergenic 15.0%
!!! AAACTTAATTTTAATTTGAC+AGG + tig0040835:13489-13508 Msa1460310:intron 15.0%
!!! TGATATAAAGGAATGTATTT+TGG - tig0040835:11524-11543 Msa0013800:intergenic 20.0%
!! TAAATATTTATAGAAGGAGT+TGG - tig0040835:11687-11706 Msa1460310:intergenic 20.0%
!!! ACTTTTTTTTCAAACTTCAA+TGG + tig0040835:11783-11802 Msa1460310:exon 20.0%
!! AAAACCATATCATATAGTAT+CGG - tig0040835:12446-12465 Msa1460310:intergenic 20.0%
!!! ATATGGTTTTGATTTTGTTT+TGG + tig0040835:12456-12475 Msa1460310:intron 20.0%
!!! TATTCATCCTCTAAATTTTT+AGG + tig0040835:12519-12538 Msa1460310:intron 20.0%
!!! TTTTATCTTCATCAACTTTA+AGG - tig0040835:12550-12569 Msa1460310:intergenic 20.0%
!! TTATTTACCATATAGTAACA+TGG - tig0040835:12629-12648 Msa1460310:intergenic 20.0%
!!! TTTTTGTATGTTTAGTCTAA+TGG + tig0040835:12746-12765 Msa1460310:intron 20.0%
!!! TTTTGTATGTTTAGTCTAAT+GGG + tig0040835:12747-12766 Msa1460310:intron 20.0%
!! CTCAAATTTATTAGTAAGAT+TGG + tig0040835:12797-12816 Msa1460310:intron 20.0%
!! AAATTCGCATATATGTAAAA+GGG - tig0040835:12904-12923 Msa1460310:intergenic 20.0%
!! AAAATTCGCATATATGTAAA+AGG - tig0040835:12905-12924 Msa1460310:intergenic 20.0%
!! AATTCGTCCATAAAATTATA+CGG - tig0040835:12940-12959 Msa1460310:intergenic 20.0%
!! AGAATAAAGAAATTACTACA+TGG - tig0040835:12978-12997 Msa1460310:intergenic 20.0%
!! AAACATTAAAGAAAATCAAC+TGG - tig0040835:13089-13108 Msa1460310:intergenic 20.0%
!! AATTTAAATAATGCAACTTG+TGG + tig0040835:13233-13252 Msa1460310:intron 20.0%
!! TAGTAATATATAAATTCGCA+TGG + tig0040835:13278-13297 Msa1460310:intron 20.0%
!! TTGAATTTGATTATTACACA+TGG - tig0040835:13360-13379 Msa1460310:intergenic 20.0%
!! TTCTAAACAAAGATATTCTT+TGG - tig0040835:13909-13928 Msa1460310:intergenic 20.0%
!! ATCAATTACAAAAACTCAAA+CGG - tig0040835:14211-14230 Msa1460310:intergenic 20.0%
!!! TGATTTATTTTCATAATTGC+AGG + tig0040835:14234-14253 Msa1460310:intron 20.0%
!!! TAATTATTTTCTTTTGCACT+AGG - tig0040835:14675-14694 Msa1460310:intergenic 20.0%
!! TAGTGCAAAAGAAAATAATT+AGG + tig0040835:14674-14693 Msa1460310:three_prime_UTR 20.0%
!!! AAGGAATGTATTTTGGATTT+CGG - tig0040835:11517-11536 Msa0013800:intergenic 25.0%
! TCGTGGTAAATATTTATAGA+AGG - tig0040835:11693-11712 Msa1460310:intergenic 25.0%
!!! AGATAGAAAAAAAGTGTTTC+GGG - tig0040835:11749-11768 Msa1460310:intergenic 25.0%
!!! GAGATAGAAAAAAAGTGTTT+CGG - tig0040835:11750-11769 Msa1460310:intergenic 25.0%
! ATTAGTCCTAGATCTAATAA+TGG - tig0040835:12401-12420 Msa1460310:intergenic 25.0%
!!! AAGTTGATGAAGATAAAAAG+AGG + tig0040835:12552-12571 Msa1460310:intron 25.0%
! CTTTAAACCATGTTACTATA+TGG + tig0040835:12619-12638 Msa1460310:intron 25.0%
! CTTACTAATAAATTTGAGCA+CGG - tig0040835:12795-12814 Msa1460310:intergenic 25.0%
!! TTTTGATCCAATTGTAAGAT+CGG + tig0040835:12826-12845 Msa1460310:intron 25.0%
! TATATGTAAAAGGGTCAATT+CGG - tig0040835:12895-12914 Msa1460310:intergenic 25.0%
!!! TCTTTTTTTTTCCTACGTAA+TGG - tig0040835:13035-13054 Msa1460310:intergenic 25.0%
! CGTAGGAAAAAAAAAGAATT+AGG + tig0040835:13038-13057 Msa1460310:intron 25.0%
!! CATTGACTAAGTACATTATT+TGG + tig0040835:13321-13340 Msa1460310:intron 25.0%
!! TGATTTACCATTTGAGTTAT+GGG + tig0040835:13451-13470 Msa1460310:intron 25.0%
! AACCAATAGTACAAAAAGTA+GGG - tig0040835:13860-13879 Msa1460310:intergenic 25.0%
! ATATTAGAAGTAAGTGCTTA+GGG + tig0040835:14075-14094 Msa1460310:intron 25.0%
! TCAATTACAAAAACTCAAAC+GGG - tig0040835:14210-14229 Msa1460310:intergenic 25.0%
! AATGAAAAGGTGGAAAAAAA+TGG - tig0040835:14409-14428 Msa1460310:intergenic 25.0%
!!! ATTTTTTTCCACCTTTTCAT+TGG + tig0040835:14408-14427 Msa1460310:three_prime_UTR 25.0%
! AAAACTCCCTAAACATTATT+TGG - tig0040835:14531-14550 Msa1460310:intergenic 25.0%
!!! AAAAAAGTGTTTCGGGTTTT+GGG - tig0040835:11742-11761 Msa1460310:intergenic 30.0%
!!! AAAAAAAGTGTTTCGGGTTT+TGG - tig0040835:11743-11762 Msa1460310:intergenic 30.0%
!!! TGGTTTTGATTTTGTTTTGG+TGG + tig0040835:12459-12478 Msa1460310:intron 30.0%
!!! GGTTTTGATTTTGTTTTGGT+GGG + tig0040835:12460-12479 Msa1460310:intron 30.0%
! TAAAAAGAGGCTTTTGAATG+AGG + tig0040835:12565-12584 Msa1460310:intron 30.0%
ATTTAGCATGACGACAAAAT+TGG - tig0040835:12595-12614 Msa1460310:intergenic 30.0%
CTAATAAGCTGCATAATTTG+AGG - tig0040835:12658-12677 Msa1460310:intergenic 30.0%
TCCAACATTATTCAAACTTG+AGG + tig0040835:12721-12740 Msa1460310:intron 30.0%
ACCTCAAGTTTGAATAATGT+TGG - tig0040835:12725-12744 Msa1460310:intergenic 30.0%
!! CACAAATCTGTTTCTATCAT+TGG - tig0040835:12857-12876 Msa1460310:intergenic 30.0%
!! TATGCGAATTTTAGAGATGT+TGG + tig0040835:12913-12932 Msa1460310:intron 30.0%
! TGTTGGTCCGTATAATTTTA+TGG + tig0040835:12930-12949 Msa1460310:intron 30.0%
ACGTAATGGTAACTATCAAA+TGG - tig0040835:13021-13040 Msa1460310:intergenic 30.0%
! TTTGATAGTTACCATTACGT+AGG + tig0040835:13021-13040 Msa1460310:intron 30.0%
ACTTAGTCAATGATGTAACA+CGG - tig0040835:13313-13332 Msa1460310:intergenic 30.0%
CATTGATAAAATTACTGCCT+TGG + tig0040835:13418-13437 Msa1460310:intron 30.0%
TAAATCACACAATTCAACCA+AGG - tig0040835:13438-13457 Msa1460310:intergenic 30.0%
! GTGATTTACCATTTGAGTTA+TGG + tig0040835:13450-13469 Msa1460310:intron 30.0%
! GATTTACCATTTGAGTTATG+GGG + tig0040835:13452-13471 Msa1460310:intron 30.0%
CAACCAATAGTACAAAAAGT+AGG - tig0040835:13861-13880 Msa1460310:intergenic 30.0%
CTAAGCACTTACTTCTAATA+TGG - tig0040835:14076-14095 Msa1460310:intergenic 30.0%
CATATTAGAAGTAAGTGCTT+AGG + tig0040835:14074-14093 Msa1460310:intron 30.0%
AGTAGCTAATGTGTATTAAG+GGG - tig0040835:14105-14124 Msa1460310:intergenic 30.0%
GAGTAGCTAATGTGTATTAA+GGG - tig0040835:14106-14125 Msa1460310:intergenic 30.0%
TGAGTAGCTAATGTGTATTA+AGG - tig0040835:14107-14126 Msa1460310:intergenic 30.0%
ATACACATTAGCTACTCAAA+TGG + tig0040835:14109-14128 Msa1460310:intron 30.0%
CAATTACAAAAACTCAAACG+GGG - tig0040835:14209-14228 Msa1460310:intergenic 30.0%
AGCAATCACAACTACTAAAA+AGG + tig0040835:14303-14322 Msa1460310:CDS 30.0%
GCAATCACAACTACTAAAAA+GGG + tig0040835:14304-14323 Msa1460310:CDS 30.0%
GGAAAGAAAAGTAAATATGC+AGG - tig0040835:14388-14407 Msa1460310:intergenic 30.0%
AAACATTATTTGGCCAAACT+CGG - tig0040835:14521-14540 Msa1460310:intergenic 30.0%
AGTTTGGCCAAATAATGTTT+AGG + tig0040835:14521-14540 Msa1460310:three_prime_UTR 30.0%
GTTTGGCCAAATAATGTTTA+GGG + tig0040835:14522-14541 Msa1460310:three_prime_UTR 30.0%
TGTGCTAATGATTGTGAAAT+AGG - tig0040835:14720-14739 Msa1460310:intergenic 30.0%
GACTTCAAATTTGTGTGTTG+AGG + tig0040835:12326-12345 Msa1460310:intron 35.0%
GCTACCGATACTATATGATA+TGG + tig0040835:12439-12458 Msa1460310:intron 35.0%
!!! TTTGATTTTGTTTTGGTGGG+TGG + tig0040835:12463-12482 Msa1460310:intron 35.0%
!!! TTGATTTTGTTTTGGTGGGT+GGG + tig0040835:12464-12483 Msa1460310:intron 35.0%
GGTGACTCCTAAAAATTTAG+AGG - tig0040835:12529-12548 Msa1460310:intergenic 35.0%
GCAAATTAGTCCATATCACT+TGG + tig0040835:12677-12696 Msa1460310:intron 35.0%
!!! GGATAATCTTTTGACTTGCA+AGG - tig0040835:12704-12723 Msa1460310:intergenic 35.0%
AGAAACAGATTTGTGCATGT+TGG + tig0040835:12862-12881 Msa1460310:intron 35.0%
GCTATTATTGTTGGATTCTG+AGG - tig0040835:13112-13131 Msa1460310:intergenic 35.0%
TCGTCGTATGCTATTATTGT+TGG - tig0040835:13121-13140 Msa1460310:intergenic 35.0%
GCTGGAGCAATTATATTTCA+TGG + tig0040835:13180-13199 Msa1460310:intron 35.0%
AGCAATTATATTTCATGGCG+TGG + tig0040835:13185-13204 Msa1460310:intron 35.0%
CAAGCAAATACTGAGTATCT+GGG + tig0040835:13666-13685 Msa1460310:CDS 35.0%
AATACTGAGTATCTGGGAAA+AGG + tig0040835:13672-13691 Msa1460310:CDS 35.0%
CAAGGAGCAACTTCAAATTT+GGG - tig0040835:13786-13805 Msa1460310:intergenic 35.0%
ACAAGGAGCAACTTCAAATT+TGG - tig0040835:13787-13806 Msa1460310:intergenic 35.0%
! TAGGGACATAGATTTTACCT+TGG - tig0040835:13842-13861 Msa1460310:intergenic 35.0%
!!! GTCCCTACTTTTTGTACTAT+TGG + tig0040835:13855-13874 Msa1460310:intron 35.0%
CATGAAAATTCTGGCAAAAG+GGG - tig0040835:13957-13976 Msa1460310:intergenic 35.0%
CCATGAAAATTCTGGCAAAA+GGG - tig0040835:13958-13977 Msa1460310:intergenic 35.0%
TCCATGAAAATTCTGGCAAA+AGG - tig0040835:13959-13978 Msa1460310:intergenic 35.0%
CTACTTGTCCATGAAAATTC+TGG - tig0040835:13966-13985 Msa1460310:intergenic 35.0%
! GTCAATACAGTTGATACAAC+TGG + tig0040835:13997-14016 Msa1460310:CDS 35.0%
! TTCCTTTGTTGGTGCTTTAT+TGG + tig0040835:14029-14048 Msa1460310:CDS 35.0%
AAACCACTCAGTCAAACAAT+CGG - tig0040835:14637-14656 Msa1460310:intergenic 35.0%
! ATAGGTAAGATCTACTGGTT+GGG - tig0040835:14702-14721 Msa1460310:intergenic 35.0%
AATAGGTAAGATCTACTGGT+TGG - tig0040835:14703-14722 Msa1460310:intergenic 35.0%
GTGAAATAGGTAAGATCTAC+TGG - tig0040835:14707-14726 Msa1460310:intergenic 35.0%
CACAATCATTAGCACAAGAA+AGG + tig0040835:14724-14743 Msa1460310:three_prime_UTR 35.0%
AGATACAAGAATGAGGTTCG+TGG - tig0040835:11710-11729 Msa1460310:intergenic 40.0%
AGAGAGGAGATACAAGAATG+AGG - tig0040835:11717-11736 Msa1460310:intergenic 40.0%
ACTTCAATGGCTTCAAGCAA+TGG + tig0040835:11796-11815 Msa1460310:exon 40.0%
GTCGGGATCTTAAAGGAAAA+CGG + tig0040835:12033-12052 Msa1460310:CDS 40.0%
GATCTTAAAGGAAAACGGTG+TGG + tig0040835:12038-12057 Msa1460310:CDS 40.0%
! GAAGGTATAACCTTTGACCA+AGG + tig0040835:12066-12085 Msa1460310:CDS 40.0%
! TTAAGAAGCATGTCAGCACT+TGG - tig0040835:12162-12181 Msa1460310:intergenic 40.0%
TGGGGTCCATTATTAGATCT+AGG + tig0040835:12392-12411 Msa1460310:intron 40.0%
!! TCATATAGTATCGGTAGCTC+TGG - tig0040835:12437-12456 Msa1460310:intergenic 40.0%
!!! TGATTTTGTTTTGGTGGGTG+GGG + tig0040835:12465-12484 Msa1460310:intron 40.0%
GATCCAATTGTAAGATCGGT+TGG + tig0040835:12830-12849 Msa1460310:intron 40.0%
ATGTAAAAGGGTCAATTCGG+TGG - tig0040835:12892-12911 Msa1460310:intergenic 40.0%
!! CGTTGGTAGGTTTTATCAGT+GGG + tig0040835:13144-13163 Msa1460310:intron 40.0%
!! GTTGGTAGGTTTTATCAGTG+GGG + tig0040835:13145-13164 Msa1460310:intron 40.0%
!! TTGGTAGGTTTTATCAGTGG+GGG + tig0040835:13146-13165 Msa1460310:intron 40.0%
! TACCATTTGAGTTATGGGGT+AGG + tig0040835:13456-13475 Msa1460310:intron 40.0%
! CAGGCAAAAGTTTTCCACTA+TGG + tig0040835:13508-13527 Msa1460310:intron 40.0%
TCAAGCTTATGGATCCATAG+TGG - tig0040835:13525-13544 Msa1460310:intergenic 40.0%
TGGATCCATAAGCTTGATTG+TGG + tig0040835:13528-13547 Msa1460310:CDS 40.0%
! TTCAAGTGTGCTGATCTACA+TGG - tig0040835:13556-13575 Msa1460310:intergenic 40.0%
ATGTAGATCAGCACACTTGA+AGG + tig0040835:13555-13574 Msa1460310:CDS 40.0%
GCAAGCAAATACTGAGTATC+TGG + tig0040835:13665-13684 Msa1460310:CDS 40.0%
!! GGAAAAGGCTGATTTGATCA+AGG + tig0040835:13687-13706 Msa1460310:CDS 40.0%
! CAAGGTTAGTGATAATGAGC+TGG + tig0040835:13705-13724 Msa1460310:CDS 40.0%
!! CAATTTTGTCACTTCCAGTC+AGG - tig0040835:13735-13754 Msa1460310:intergenic 40.0%
ATGCTACTGCTTTGACATTG+TGG + tig0040835:13758-13777 Msa1460310:CDS 40.0%
! CCCTTTTGCCAGAATTTTCA+TGG + tig0040835:13955-13974 Msa1460310:intron 40.0%
CTCAAGTTTGCAAATGCATG+TGG + tig0040835:14280-14299 Msa1460310:CDS 40.0%
CAGGAATCTATGCTTTGATC+AGG - tig0040835:14369-14388 Msa1460310:intergenic 40.0%
CAAGAGCAACTCCAATGAAA+AGG - tig0040835:14422-14441 Msa1460310:intergenic 40.0%
ATCAAAATCACTGCCGAGTT+TGG + tig0040835:14505-14524 Msa1460310:three_prime_UTR 40.0%
!! AGAAGGAGTTGGTAGAGAGA+AGG - tig0040835:11676-11695 Msa1460310:intergenic 45.0%
GACTTTGTCCCAACTGTTTC+CGG + tig0040835:11871-11890 Msa1460310:CDS 45.0%
ACTTTGTCCCAACTGTTTCC+GGG + tig0040835:11872-11891 Msa1460310:CDS 45.0%
AAACTAGGCGATGACGAGTT+CGG + tig0040835:12000-12019 Msa1460310:CDS 45.0%
CATAAACTCACGCTCTCCAT+CGG - tig0040835:12127-12146 Msa1460310:intergenic 45.0%
AGTTCGAGGTTGAGTTCTTC+AGG - tig0040835:12186-12205 Msa1460310:intergenic 45.0%
GTACAGATCTGATGAGTTCG+AGG - tig0040835:12200-12219 Msa1460310:intergenic 45.0%
!!! GATTTTGTTTTGGTGGGTGG+GGG + tig0040835:12466-12485 Msa1460310:intron 45.0%
CTTGCAAGGACCAAGTGATA+TGG - tig0040835:12690-12709 Msa1460310:intergenic 45.0%
GGACCAACCGATCTTACAAT+TGG - tig0040835:12836-12855 Msa1460310:intergenic 45.0%
! ATAGCATACGACGAAAGCGT+TGG + tig0040835:13127-13146 Msa1460310:intron 45.0%
!! GCGTTGGTAGGTTTTATCAG+TGG + tig0040835:13143-13162 Msa1460310:intron 45.0%
!! TGGTAGGTTTTATCAGTGGG+GGG + tig0040835:13147-13166 Msa1460310:intron 45.0%
CACCTACCCCATAACTCAAA+TGG - tig0040835:13461-13480 Msa1460310:intergenic 45.0%
TGGCTCCACAATCAAGCTTA+TGG - tig0040835:13536-13555 Msa1460310:intergenic 45.0%
ATCAGCACACTTGAAGGCAA+TGG + tig0040835:13561-13580 Msa1460310:CDS 45.0%
ATGGAAGTTGCCAAAGAAGC+TGG + tig0040835:13580-13599 Msa1460310:CDS 45.0%
GGTTAGGATCATAGGAGAGA+AGG - tig0040835:13609-13628 Msa1460310:intergenic 45.0%
AAGTTGCTCCTTGTCACTCT+TGG + tig0040835:13793-13812 Msa1460310:CDS 45.0%
CATGTTCACCAAGAGTGACA+AGG - tig0040835:13804-13823 Msa1460310:intergenic 45.0%
CTTGTCACTCTTGGTGAACA+TGG + tig0040835:13802-13821 Msa1460310:CDS 45.0%
AAAATTCTGGCAAAAGGGGC+AGG - tig0040835:13953-13972 Msa1460310:intergenic 45.0%
! ACAGTTGATACAACTGGTGC+CGG + tig0040835:14003-14022 Msa1460310:CDS 45.0%
AGCACCAACAAAGGAATCAC+CGG - tig0040835:14025-14044 Msa1460310:intergenic 45.0%
! GGCCAATAAAGCACCAACAA+AGG - tig0040835:14034-14053 Msa1460310:intergenic 45.0%
!! GGCCAAGATTGTTGATGATC+AGG + tig0040835:14050-14069 Msa1460310:CDS 45.0%
GGCCTGATCATCAACAATCT+TGG - tig0040835:14055-14074 Msa1460310:intergenic 45.0%
TTCAGTACATCCTCCTCCTT+GGG - tig0040835:14346-14365 Msa1460310:intergenic 45.0%
GAGCAACTCCAATGAAAAGG+TGG - tig0040835:14419-14438 Msa1460310:intergenic 45.0%
TCAGTCAAACAATCGGACAC+AGG - tig0040835:14630-14649 Msa1460310:intergenic 45.0%
TGTCCGATTGTTTGACTGAG+TGG + tig0040835:14631-14650 Msa1460310:three_prime_UTR 45.0%
!! AATAAAATTACTAAAATTAA+GGG - tig0040835:11606-11625 Msa1460310:intergenic 5.0%
!!! TTTCGGGTTTTGGGAGAGAG+AGG - tig0040835:11733-11752 Msa1460310:intergenic 50.0%
! ACTGGTCTCATCGTCAGCTT+CGG + tig0040835:11835-11854 Msa1460310:CDS 50.0%
CTTTGTCCCAACTGTTTCCG+GGG + tig0040835:11873-11892 Msa1460310:CDS 50.0%
TCCTAATCGGGAAACAGCGA+TGG - tig0040835:11959-11978 Msa1460310:intergenic 50.0%
! ATCGCTGTTTCCCGATTAGG+AGG + tig0040835:11958-11977 Msa1460310:CDS 50.0%
AGGCAGCTTTGCCTCCTAAT+CGG - tig0040835:11972-11991 Msa1460310:intergenic 50.0%
CATGCTCGTCGGGATCTTAA+AGG + tig0040835:12026-12045 Msa1460310:CDS 50.0%
AGTACGTGCACCTTGGTCAA+AGG - tig0040835:12079-12098 Msa1460310:intergenic 50.0%
TTTGTTACTCTACGCGCCGA+TGG + tig0040835:12108-12127 Msa1460310:CDS 50.0%
CGACATTGACATGTCAGCGT+TGG + tig0040835:12353-12372 Msa1460310:intron 50.0%
!! TCAGCGTTGGTGTGTTCATG+TGG + tig0040835:12366-12385 Msa1460310:intron 50.0%
TTGGTGTGTTCATGTGGTGG+TGG + tig0040835:12372-12391 Msa1460310:intron 50.0%
TGGTGTGTTCATGTGGTGGT+GGG + tig0040835:12373-12392 Msa1460310:intron 50.0%
!! CATACGACGAAAGCGTTGGT+AGG + tig0040835:13131-13150 Msa1460310:intron 50.0%
!! AGGTTTTATCAGTGGGGGGT+TGG + tig0040835:13151-13170 Msa1460310:intron 50.0%
!! GGTTTTATCAGTGGGGGGTT+GGG + tig0040835:13152-13171 Msa1460310:intron 50.0%
TAGGCGGAGGTTAGGATCAT+AGG - tig0040835:13617-13636 Msa1460310:intergenic 50.0%
AATGAGCTGGAGTTCCTGAC+TGG + tig0040835:13718-13737 Msa1460310:CDS 50.0%
TGGCGCAAGATACTACACCA+AGG + tig0040835:13822-13841 Msa1460310:CDS 50.0%
AGCAATTCCTGCTCTTCCCA+AGG + tig0040835:14327-14346 Msa1460310:CDS 50.0%
AATTCCTGCTCTTCCCAAGG+AGG + tig0040835:14330-14349 Msa1460310:CDS 50.0%
GTTCAGTACATCCTCCTCCT+TGG - tig0040835:14347-14366 Msa1460310:intergenic 50.0%
AGCAATGGCATCCCAACCAC+AGG + tig0040835:11811-11830 Msa1460310:CDS 55.0%
TGAGACCAGTGCCTGTGGTT+GGG - tig0040835:11825-11844 Msa1460310:intergenic 55.0%
ATGAGACCAGTGCCTGTGGT+TGG - tig0040835:11826-11845 Msa1460310:intergenic 55.0%
AAAACCGGGGGCTTCTGCAA+GGG - tig0040835:11902-11921 Msa1460310:intergenic 55.0%
!! GGGAGCTTTGAGAAAACCGG+GGG - tig0040835:11914-11933 Msa1460310:intergenic 55.0%
!! CGGGAGCTTTGAGAAAACCG+GGG - tig0040835:11915-11934 Msa1460310:intergenic 55.0%
!! CCGGGAGCTTTGAGAAAACC+GGG - tig0040835:11916-11935 Msa1460310:intergenic 55.0%
! CCCGGTTTTCTCAAAGCTCC+CGG + tig0040835:11913-11932 Msa1460310:CDS 55.0%
!! GCCGGGAGCTTTGAGAAAAC+CGG - tig0040835:11917-11936 Msa1460310:intergenic 55.0%
! GGTTTTCTCAAAGCTCCCGG+CGG + tig0040835:11916-11935 Msa1460310:CDS 55.0%
! GCCATCGCTGTTTCCCGATT+AGG + tig0040835:11955-11974 Msa1460310:CDS 55.0%
GGCAGCTTTGCCTCCTAATC+GGG - tig0040835:11971-11990 Msa1460310:intergenic 55.0%
ATCGCCTAGTTTCCCGACGA+AGG - tig0040835:11992-12011 Msa1460310:intergenic 55.0%
GAGTTCGGTCACATGCTCGT+CGG + tig0040835:12015-12034 Msa1460310:CDS 55.0%
AGTTCGGTCACATGCTCGTC+GGG + tig0040835:12016-12035 Msa1460310:CDS 55.0%
GAAAACGGTGTGGTCGCAGA+AGG + tig0040835:12048-12067 Msa1460310:CDS 55.0%
CCAAAGCAGTACGTGCACCT+TGG - tig0040835:12086-12105 Msa1460310:intergenic 55.0%
CCAAGGTGCACGTACTGCTT+TGG + tig0040835:12083-12102 Msa1460310:CDS 55.0%
! GCGTTGGTGTGTTCATGTGG+TGG + tig0040835:12369-12388 Msa1460310:intron 55.0%
! GGTGTGTTCATGTGGTGGTG+GGG + tig0040835:12374-12393 Msa1460310:intron 55.0%
!! TTTTGGTGGGTGGGGGTTGT+TGG + tig0040835:12473-12492 Msa1460310:intron 55.0%
GAGAAGGCAGCCAGCTTCTT+TGG - tig0040835:13593-13612 Msa1460310:intergenic 55.0%
TTGCGAGCTTCTTCCGCTGA+GGG - tig0040835:13649-13668 Msa1460310:intergenic 55.0%
!! GGTGCCGGTGATTCCTTTGT+TGG + tig0040835:14018-14037 Msa1460310:CDS 55.0%
GACGATGAGACCAGTGCCTG+TGG - tig0040835:11830-11849 Msa1460310:intergenic 60.0%
GGGAGACCCCGGAAACAGTT+GGG - tig0040835:11882-11901 Msa1460310:intergenic 60.0%
AGGGAGACCCCGGAAACAGT+TGG - tig0040835:11883-11902 Msa1460310:intergenic 60.0%
GAAAACCGGGGGCTTCTGCA+AGG - tig0040835:11903-11922 Msa1460310:intergenic 60.0%
GGAGGCAAAGCTGCCTTCGT+CGG + tig0040835:11976-11995 Msa1460310:CDS 60.0%
GAGGCAAAGCTGCCTTCGTC+GGG + tig0040835:11977-11996 Msa1460310:CDS 60.0%
GCTGCCTTCGTCGGGAAACT+AGG + tig0040835:11985-12004 Msa1460310:CDS 60.0%
CACAGTGGTAGGCGGAGGTT+AGG - tig0040835:13625-13644 Msa1460310:intergenic 60.0%
CTAACCTCCGCCTACCACTG+TGG + tig0040835:13623-13642 Msa1460310:CDS 60.0%
CTTGCGAGCTTCTTCCGCTG+AGG - tig0040835:13650-13669 Msa1460310:intergenic 60.0%
TCCTGCTCTTCCCAAGGAGG+AGG + tig0040835:14333-14352 Msa1460310:CDS 60.0%
TCCTCCTCCTTGGGAAGAGC+AGG - tig0040835:14337-14356 Msa1460310:intergenic 60.0%
GGCATCCCAACCACAGGCAC+TGG + tig0040835:11817-11836 Msa1460310:CDS 65.0%
GGCTTCTGCAAGGGAGACCC+CGG - tig0040835:11893-11912 Msa1460310:intergenic 65.0%
GTCTCCCTTGCAGAAGCCCC+CGG + tig0040835:11895-11914 Msa1460310:CDS 65.0%
ACAGCGATGGCGACGTTCGC+TGG - tig0040835:11946-11965 Msa1460310:intergenic 65.0%
GGTGGGTGGGGGTTGTTGGT+TGG + tig0040835:12477-12496 Msa1460310:intron 65.0%
GTGGGGGGTTGGGATTTCGC+TGG + tig0040835:13162-13181 Msa1460310:intron 65.0%
CTGAGGGCCACAGTGGTAGG+CGG - tig0040835:13633-13652 Msa1460310:intergenic 65.0%
CCTACCACTGTGGCCCTCAG+CGG + tig0040835:13633-13652 Msa1460310:CDS 65.0%
TCTTCCGCTGAGGGCCACAG+TGG - tig0040835:13640-13659 Msa1460310:intergenic 65.0%
ACGTTCGCTGGTGCACCGCC+GGG - tig0040835:11934-11953 Msa1460310:intergenic 70.0%
GACGTTCGCTGGTGCACCGC+CGG - tig0040835:11935-11954 Msa1460310:intergenic 70.0%
AGGGCCACAGTGGTAGGCGG+AGG - tig0040835:13630-13649 Msa1460310:intergenic 70.0%
CCGCTGAGGGCCACAGTGGT+AGG - tig0040835:13636-13655 Msa1460310:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0040835 gene 11514 14762 11514 ID=Msa1460310;Name=Msa1460310
tig0040835 mRNA 11514 14762 11514 ID=Msa1460310-mRNA-1;Parent=Msa1460310;Name=Msa1460310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=288|1|1|1|1|1|4|381|329
tig0040835 exon 11514 12215 11514 ID=Msa1460310-mRNA-1:exon:22667;Parent=Msa1460310-mRNA-1
tig0040835 exon 13511 13843 13511 ID=Msa1460310-mRNA-1:exon:22668;Parent=Msa1460310-mRNA-1
tig0040835 exon 13967 14083 13967 ID=Msa1460310-mRNA-1:exon:22669;Parent=Msa1460310-mRNA-1
tig0040835 exon 14256 14762 14256 ID=Msa1460310-mRNA-1:exon:22670;Parent=Msa1460310-mRNA-1
tig0040835 five_prime_UTR 11514 11801 11514 ID=Msa1460310-mRNA-1:five_prime_utr;Parent=Msa1460310-mRNA-1
tig0040835 CDS 11802 12215 11802 ID=Msa1460310-mRNA-1:cds;Parent=Msa1460310-mRNA-1
tig0040835 CDS 13511 13843 13511 ID=Msa1460310-mRNA-1:cds;Parent=Msa1460310-mRNA-1
tig0040835 CDS 13967 14083 13967 ID=Msa1460310-mRNA-1:cds;Parent=Msa1460310-mRNA-1
tig0040835 CDS 14256 14381 14256 ID=Msa1460310-mRNA-1:cds;Parent=Msa1460310-mRNA-1
tig0040835 three_prime_UTR 14382 14762 14382 ID=Msa1460310-mRNA-1:three_prime_utr;Parent=Msa1460310-mRNA-1
Gene Sequence

>Msa1460310

ATGGCTTCAAGCAATGGCATCCCAACCACAGGCACTGGTCTCATCGTCAGCTTCGGTGAGATGCTGATCGACTTTGTCCCAACTGTTTCCGGGGTCTCCCTTGCAGAAGCCCCCGGTTTTCTCAAAGCTCCCGGCGGTGCACCAGCGAACGTCGCCATCGCTGTTTCCCGATTAGGAGGCAAAGCTGCCTTCGTCGGGAAACTAGGCGATGACGAGTTCGGTCACATGCTCGTCGGGATCTTAAAGGAAAACGGTGTGGTCGCAGAAGGTATAACCTTTGACCAAGGTGCACGTACTGCTTTGGCGTTTGTTACTCTACGCGCCGATGGAGAGCGTGAGTTTATGTTTTATAGAAATCCAAGTGCTGACATGCTTCTTAAACCTGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCACTATGGATCCATAAGCTTGATTGTGGAGCCATGTAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAAAGAAGCTGGCTGCCTTCTCTCCTATGATCCTAACCTCCGCCTACCACTGTGGCCCTCAGCGGAAGAAGCTCGCAAGCAAATACTGAGTATCTGGGAAAAGGCTGATTTGATCAAGGTTAGTGATAATGAGCTGGAGTTCCTGACTGGAAGTGACAAAATTGATGATGCTACTGCTTTGACATTGTGGCACCCAAATTTGAAGTTGCTCCTTGTCACTCTTGGTGAACATGGCGCAAGATACTACACCAAGAATTTTCATGGACAAGTAGATGCATTCAAAGTCAATACAGTTGATACAACTGGTGCCGGTGATTCCTTTGTTGGTGCTTTATTGGCCAAGATTGTTGATGATCAGGCCATATTAGAAGATGAATCAAAGTTAAGAGAAGTACTCAAGTTTGCAAATGCATGTGGAGCAATCACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCAAGGAGGAGGATGTACTGAACCTGATCAAAGCATAG

Protein sequence

>Msa1460310

MASSNGIPTTGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKAAFVGKLGDDEFGHMLVGILKENGVVAEGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSAEEARKQILSIWEKADLIKVSDNELEFLTGSDKIDDATALTLWHPNLKLLLVTLGEHGARYYTKNFHGQVDAFKVNTVDTTGAGDSFVGALLAKIVDDQAILEDESKLREVLKFANACGAITTTKKGAIPALPKEEDVLNLIKA*