Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515260 | XP_003601984.1 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 5.42e-116 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515260 | sp|Q9LX15|DFC_ARATH | 46.914 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 6.73e-45 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515260 | G7J4B2 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 2.59e-116 | 335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0515260 | 0.818666 | 1.739739e-52 | -8.615850e-47 |
| Msa0004590 | Msa0515260 | 0.823424 | 1.395563e-53 | -8.615850e-47 |
| Msa0012780 | Msa0515260 | 0.825234 | 5.239539e-54 | -8.615850e-47 |
| Msa0012820 | Msa0515260 | 0.854923 | 8.905229e-62 | -8.615850e-47 |
| Msa0024280 | Msa0515260 | 0.812649 | 3.812128e-51 | -8.615850e-47 |
| Msa0024290 | Msa0515260 | 0.807366 | 5.235228e-50 | -8.615850e-47 |
| Msa0036230 | Msa0515260 | 0.818618 | 1.784636e-52 | -8.615850e-47 |
| Msa0036580 | Msa0515260 | 0.850487 | 1.644856e-60 | -8.615850e-47 |
| Msa0045850 | Msa0515260 | 0.816562 | 5.188515e-52 | -8.615850e-47 |
| Msa0046240 | Msa0515260 | 0.816672 | 4.901205e-52 | -8.615850e-47 |
| Msa0048950 | Msa0515260 | 0.880442 | 5.472628e-70 | -8.615850e-47 |
| Msa0059880 | Msa0515260 | 0.857015 | 2.176513e-62 | -8.615850e-47 |
| Msa0061590 | Msa0515260 | 0.810113 | 1.354385e-50 | -8.615850e-47 |
| Msa0061600 | Msa0515260 | 0.867696 | 1.131606e-65 | -8.615850e-47 |
| Msa0072030 | Msa0515260 | 0.855663 | 5.422574e-62 | -8.615850e-47 |
| Msa0084160 | Msa0515260 | 0.829079 | 6.289995e-55 | -8.615850e-47 |
| Msa0101650 | Msa0515260 | -0.808663 | 2.772342e-50 | -8.615850e-47 |
| Msa0102920 | Msa0515260 | 0.809041 | 2.302094e-50 | -8.615850e-47 |
| Msa0102930 | Msa0515260 | 0.800871 | 1.175993e-48 | -8.615850e-47 |
| Msa0106110 | Msa0515260 | 0.818509 | 1.889025e-52 | -8.615850e-47 |
| Msa0106120 | Msa0515260 | 0.850200 | 1.980124e-60 | -8.615850e-47 |
| Msa0106130 | Msa0515260 | 0.872703 | 2.594792e-67 | -8.615850e-47 |
| Msa0112640 | Msa0515260 | 0.803511 | 3.367003e-49 | -8.615850e-47 |
| Msa0120050 | Msa0515260 | 0.803411 | 3.531173e-49 | -8.615850e-47 |
| Msa0120070 | Msa0515260 | 0.826710 | 2.336113e-54 | -8.615850e-47 |
| Msa0131460 | Msa0515260 | 0.819454 | 1.151950e-52 | -8.615850e-47 |
| Msa0139270 | Msa0515260 | 0.840529 | 8.233477e-58 | -8.615850e-47 |
| Msa0139460 | Msa0515260 | 0.849165 | 3.852712e-60 | -8.615850e-47 |
| Msa0139720 | Msa0515260 | 0.847890 | 8.685764e-60 | -8.615850e-47 |
| Msa0143150 | Msa0515260 | 0.812118 | 4.978355e-51 | -8.615850e-47 |
| Msa0143680 | Msa0515260 | 0.811655 | 6.280535e-51 | -8.615850e-47 |
| Msa0143710 | Msa0515260 | 0.823137 | 1.628077e-53 | -8.615850e-47 |
| Msa0143740 | Msa0515260 | 0.818278 | 2.130233e-52 | -8.615850e-47 |
| Msa0143770 | Msa0515260 | 0.820638 | 6.170758e-53 | -8.615850e-47 |
| Msa0147670 | Msa0515260 | 0.847380 | 1.199516e-59 | -8.615850e-47 |
| Msa0147680 | Msa0515260 | 0.809878 | 1.522077e-50 | -8.615850e-47 |
| Msa0150910 | Msa0515260 | 0.844307 | 8.200012e-59 | -8.615850e-47 |
| Msa0152650 | Msa0515260 | 0.802722 | 4.903009e-49 | -8.615850e-47 |
| Msa0152740 | Msa0515260 | 0.839598 | 1.439803e-57 | -8.615850e-47 |
| Msa0163340 | Msa0515260 | 0.824413 | 8.180940e-54 | -8.615850e-47 |
| Msa0163370 | Msa0515260 | 0.842996 | 1.838158e-58 | -8.615850e-47 |
| Msa0176620 | Msa0515260 | 0.856786 | 2.542799e-62 | -8.615850e-47 |
| Msa0197750 | Msa0515260 | 0.879048 | 1.712767e-69 | -8.615850e-47 |
| Msa0212490 | Msa0515260 | 0.804122 | 2.513556e-49 | -8.615850e-47 |
| Msa0216760 | Msa0515260 | 0.824819 | 6.563837e-54 | -8.615850e-47 |
| Msa0219210 | Msa0515260 | 0.849116 | 3.975349e-60 | -8.615850e-47 |
| Msa0223880 | Msa0515260 | 0.852959 | 3.276662e-61 | -8.615850e-47 |
| Msa0225910 | Msa0515260 | 0.824063 | 9.886418e-54 | -8.615850e-47 |
| Msa0226410 | Msa0515260 | 0.829699 | 4.448019e-55 | -8.615850e-47 |
| Msa0232860 | Msa0515260 | -0.807038 | 6.144482e-50 | -8.615850e-47 |
| Msa0234120 | Msa0515260 | 0.801513 | 8.688944e-49 | -8.615850e-47 |
| Msa0235080 | Msa0515260 | 0.811912 | 5.522208e-51 | -8.615850e-47 |
| Msa0236610 | Msa0515260 | 0.805579 | 1.247019e-49 | -8.615850e-47 |
| Msa0374130 | Msa0515260 | 0.930855 | 8.907391e-94 | -8.615850e-47 |
| Msa0389060 | Msa0515260 | -0.802572 | 5.265109e-49 | -8.615850e-47 |
| Msa0393900 | Msa0515260 | 0.803488 | 3.403407e-49 | -8.615850e-47 |
| Msa0423680 | Msa0515260 | 0.813694 | 2.248325e-51 | -8.615850e-47 |
| Msa0469550 | Msa0515260 | 0.990894 | 7.437464e-185 | -8.615850e-47 |
| Msa0470370 | Msa0515260 | 0.823635 | 1.245676e-53 | -8.615850e-47 |
| Msa0242390 | Msa0515260 | 0.815382 | 9.515758e-52 | -8.615850e-47 |
| Msa0243990 | Msa0515260 | 0.805937 | 1.048694e-49 | -8.615850e-47 |
| Msa0264940 | Msa0515260 | 0.830199 | 3.360285e-55 | -8.615850e-47 |
| Msa0265060 | Msa0515260 | 0.855884 | 4.675036e-62 | -8.615850e-47 |
| Msa0266640 | Msa0515260 | 0.834169 | 3.500828e-56 | -8.615850e-47 |
| Msa0266650 | Msa0515260 | 0.813036 | 3.135817e-51 | -8.615850e-47 |
| Msa0269720 | Msa0515260 | 0.814550 | 1.455204e-51 | -8.615850e-47 |
| Msa0277280 | Msa0515260 | 0.867493 | 1.314093e-65 | -8.615850e-47 |
| Msa0278940 | Msa0515260 | 0.809636 | 1.715612e-50 | -8.615850e-47 |
| Msa0278950 | Msa0515260 | 0.826415 | 2.747698e-54 | -8.615850e-47 |
| Msa0291750 | Msa0515260 | 0.814354 | 1.608311e-51 | -8.615850e-47 |
| Msa0295980 | Msa0515260 | 0.839675 | 1.374791e-57 | -8.615850e-47 |
| Msa0297650 | Msa0515260 | 0.805221 | 1.482164e-49 | -8.615850e-47 |
| Msa0298270 | Msa0515260 | 0.866313 | 3.124394e-65 | -8.615850e-47 |
| Msa0302990 | Msa0515260 | 0.829279 | 5.627654e-55 | -8.615850e-47 |
| Msa0303120 | Msa0515260 | 0.825645 | 4.186658e-54 | -8.615850e-47 |
| Msa0304550 | Msa0515260 | 0.826426 | 2.730302e-54 | -8.615850e-47 |
| Msa0315300 | Msa0515260 | 0.805027 | 1.627806e-49 | -8.615850e-47 |
| Msa0318370 | Msa0515260 | 0.802962 | 4.373286e-49 | -8.615850e-47 |
| Msa0333940 | Msa0515260 | 0.827885 | 1.221484e-54 | -8.615850e-47 |
| Msa0334050 | Msa0515260 | 0.842412 | 2.626591e-58 | -8.615850e-47 |
| Msa0336630 | Msa0515260 | 0.848232 | 6.990032e-60 | -8.615850e-47 |
| Msa0336640 | Msa0515260 | 0.800918 | 1.150221e-48 | -8.615850e-47 |
| Msa0340650 | Msa0515260 | 0.848820 | 4.803132e-60 | -8.615850e-47 |
| Msa0341110 | Msa0515260 | 0.832832 | 7.546019e-56 | -8.615850e-47 |
| Msa0343720 | Msa0515260 | 0.811651 | 6.293902e-51 | -8.615850e-47 |
| Msa0491760 | Msa0515260 | 0.838331 | 3.064820e-57 | -8.615850e-47 |
| Msa0491770 | Msa0515260 | 0.802286 | 6.030384e-49 | -8.615850e-47 |
| Msa0515260 | Msa0531030 | 0.821905 | 3.148282e-53 | -8.615850e-47 |
| Msa0515260 | Msa0531040 | 0.803341 | 3.650748e-49 | -8.615850e-47 |
| Msa0515260 | Msa0531080 | 0.829369 | 5.350406e-55 | -8.615850e-47 |
| Msa0515260 | Msa0533510 | 0.835699 | 1.441062e-56 | -8.615850e-47 |
| Msa0515260 | Msa0533520 | 0.815095 | 1.102102e-51 | -8.615850e-47 |
| Msa0515260 | Msa0535570 | 0.803948 | 2.732517e-49 | -8.615850e-47 |
| Msa0515260 | Msa0543740 | 0.819716 | 1.003457e-52 | -8.615850e-47 |
| Msa0515260 | Msa0548760 | 0.855875 | 4.703185e-62 | -8.615850e-47 |
| Msa0515260 | Msa0548770 | 0.839477 | 1.548376e-57 | -8.615850e-47 |
| Msa0515260 | Msa0548970 | 0.889752 | 1.827681e-73 | -8.615850e-47 |
| Msa0515260 | Msa0549920 | 0.827828 | 1.260835e-54 | -8.615850e-47 |
| Msa0515260 | Msa0584970 | 0.844831 | 5.923310e-59 | -8.615850e-47 |
| Msa0515260 | Msa0587920 | 0.818842 | 1.587550e-52 | -8.615850e-47 |
| Msa0515260 | Msa0589450 | 0.806091 | 9.732669e-50 | -8.615850e-47 |
| Msa0515260 | Msa0589460 | 0.808604 | 2.853848e-50 | -8.615850e-47 |
| Msa0515260 | Msa0589730 | 0.802557 | 5.302022e-49 | -8.615850e-47 |
| Msa0515260 | Msa0599600 | 0.840267 | 9.638918e-58 | -8.615850e-47 |
| Msa0515260 | Msa0602050 | 0.827066 | 1.920660e-54 | -8.615850e-47 |
| Msa0515260 | Msa0603950 | 0.856793 | 2.529834e-62 | -8.615850e-47 |
| Msa0515260 | Msa0605400 | 0.812504 | 4.101882e-51 | -8.615850e-47 |
| Msa0515260 | Msa0605410 | 0.817971 | 2.499987e-52 | -8.615850e-47 |
| Msa0515260 | Msa0605460 | 0.864312 | 1.331432e-64 | -8.615850e-47 |
| Msa0515260 | Msa0605470 | 0.864874 | 8.881145e-65 | -8.615850e-47 |
| Msa0515260 | Msa0623980 | 0.819471 | 1.141471e-52 | -8.615850e-47 |
| Msa0515260 | Msa0624050 | 0.809575 | 1.768642e-50 | -8.615850e-47 |
| Msa0515260 | Msa0640290 | 0.829100 | 6.219140e-55 | -8.615850e-47 |
| Msa0515260 | Msa0643840 | 0.822037 | 2.934364e-53 | -8.615850e-47 |
| Msa0515260 | Msa0645100 | 0.832462 | 9.326952e-56 | -8.615850e-47 |
| Msa0515260 | Msa0645120 | 0.824575 | 7.494333e-54 | -8.615850e-47 |
| Msa0515260 | Msa0645150 | 0.803948 | 2.731648e-49 | -8.615850e-47 |
| Msa0515260 | Msa0646040 | 0.859506 | 3.946847e-63 | -8.615850e-47 |
| Msa0515260 | Msa0667640 | 0.806340 | 8.625994e-50 | -8.615850e-47 |
| Msa0515260 | Msa0668210 | 0.809863 | 1.533005e-50 | -8.615850e-47 |
| Msa0515260 | Msa0670220 | 0.822481 | 2.315427e-53 | -8.615850e-47 |
| Msa0515260 | Msa0670360 | 0.824343 | 8.496418e-54 | -8.615850e-47 |
| Msa0515260 | Msa0676140 | 0.812061 | 5.124766e-51 | -8.615850e-47 |
| Msa0515260 | Msa0676190 | 0.829709 | 4.423961e-55 | -8.615850e-47 |
| Msa0515260 | Msa0676200 | 0.815692 | 8.116403e-52 | -8.615850e-47 |
| Msa0515260 | Msa0678620 | 0.858804 | 6.406284e-63 | -8.615850e-47 |
| Msa0515260 | Msa0682730 | 0.809028 | 2.316714e-50 | -8.615850e-47 |
| Msa0515260 | Msa0684590 | 0.832401 | 9.654492e-56 | -8.615850e-47 |
| Msa0515260 | Msa0684600 | 0.833131 | 6.361923e-56 | -8.615850e-47 |
| Msa0515260 | Msa0684720 | 0.894240 | 2.969793e-75 | -8.615850e-47 |
| Msa0515260 | Msa0727480 | 0.857878 | 1.209269e-62 | -8.615850e-47 |
| Msa0515260 | Msa0732530 | -0.800915 | 1.151899e-48 | -8.615850e-47 |
| Msa0515260 | Msa0735280 | 0.863961 | 1.713076e-64 | -8.615850e-47 |
| Msa0515260 | Msa0747500 | 0.802485 | 5.486009e-49 | -8.615850e-47 |
| Msa0515260 | Msa0758150 | 0.817751 | 2.803408e-52 | -8.615850e-47 |
| Msa0515260 | Msa0768670 | 0.839044 | 2.004684e-57 | -8.615850e-47 |
| Msa0515260 | Msa0768720 | 0.845759 | 3.324437e-59 | -8.615850e-47 |
| Msa0515260 | Msa0777070 | 0.801260 | 9.790040e-49 | -8.615850e-47 |
| Msa0515260 | Msa0777250 | 0.849305 | 3.522065e-60 | -8.615850e-47 |
| Msa0515260 | Msa0791300 | 0.827785 | 1.291265e-54 | -8.615850e-47 |
| Msa0515260 | Msa0796430 | 0.844373 | 7.870367e-59 | -8.615850e-47 |
| Msa0515260 | Msa0814230 | 0.816627 | 5.016789e-52 | -8.615850e-47 |
| Msa0515260 | Msa0817100 | 0.807967 | 3.902988e-50 | -8.615850e-47 |
| Msa0515260 | Msa0824860 | 0.812771 | 3.585289e-51 | -8.615850e-47 |
| Msa0515260 | Msa0834270 | 0.851807 | 6.977782e-61 | -8.615850e-47 |
| Msa0515260 | Msa0841130 | 0.800528 | 1.381869e-48 | -8.615850e-47 |
| Msa0515260 | Msa0854840 | 0.815995 | 6.945810e-52 | -8.615850e-47 |
| Msa0515260 | Msa0862020 | -0.802286 | 6.028199e-49 | -8.615850e-47 |
| Msa0515260 | Msa0863840 | 0.816180 | 6.315780e-52 | -8.615850e-47 |
| Msa0515260 | Msa0883640 | 0.904673 | 9.593866e-80 | -8.615850e-47 |
| Msa0515260 | Msa0893840 | 0.800157 | 1.644162e-48 | -8.615850e-47 |
| Msa0515260 | Msa0896990 | 0.800763 | 1.237125e-48 | -8.615850e-47 |
| Msa0515260 | Msa0902340 | 0.837818 | 4.154001e-57 | -8.615850e-47 |
| Msa0515260 | Msa0910830 | 0.901387 | 2.821201e-78 | -8.615850e-47 |
| Msa0515260 | Msa0913550 | 0.848076 | 7.717632e-60 | -8.615850e-47 |
| Msa0515260 | Msa0924360 | 0.802572 | 5.263698e-49 | -8.615850e-47 |
| Msa0515260 | Msa0924490 | 0.801414 | 9.108501e-49 | -8.615850e-47 |
| Msa0515260 | Msa0941120 | 0.804523 | 2.074017e-49 | -8.615850e-47 |
| Msa0515260 | Msa0948050 | 0.822866 | 1.883189e-53 | -8.615850e-47 |
| Msa0515260 | Msa0951060 | 0.800421 | 1.452550e-48 | -8.615850e-47 |
| Msa0515260 | Msa0951150 | 0.818735 | 1.678857e-52 | -8.615850e-47 |
| Msa0515260 | Msa0960090 | 0.905900 | 2.630371e-80 | -8.615850e-47 |
| Msa0515260 | Msa0967820 | 0.842605 | 2.335451e-58 | -8.615850e-47 |
| Msa0515260 | Msa0971880 | 0.825952 | 3.541093e-54 | -8.615850e-47 |
| Msa0515260 | Msa0972370 | 0.807178 | 5.739477e-50 | -8.615850e-47 |
| Msa0515260 | Msa0985290 | 0.803648 | 3.152700e-49 | -8.615850e-47 |
| Msa0515260 | Msa0985700 | 0.904192 | 1.586270e-79 | -8.615850e-47 |
| Msa0515260 | Msa0987640 | 0.810980 | 8.798789e-51 | -8.615850e-47 |
| Msa0515260 | Msa0993450 | 0.836735 | 7.862142e-57 | -8.615850e-47 |
| Msa0515260 | Msa0996940 | 0.818438 | 1.960491e-52 | -8.615850e-47 |
| Msa0515260 | Msa1003110 | 0.818075 | 2.368107e-52 | -8.615850e-47 |
| Msa0515260 | Msa1006940 | 0.842601 | 2.340776e-58 | -8.615850e-47 |
| Msa0515260 | Msa1020540 | 0.816620 | 5.034947e-52 | -8.615850e-47 |
| Msa0515260 | Msa1021620 | 0.863330 | 2.688367e-64 | -8.615850e-47 |
| Msa0515260 | Msa1024350 | 0.818835 | 1.593383e-52 | -8.615850e-47 |
| Msa0515260 | Msa1026050 | 0.824394 | 8.265929e-54 | -8.615850e-47 |
| Msa0515260 | Msa1036020 | 0.809642 | 1.710518e-50 | -8.615850e-47 |
| Msa0515260 | Msa1041630 | 0.805108 | 1.565411e-49 | -8.615850e-47 |
| Msa0515260 | Msa1060320 | 0.802645 | 5.083896e-49 | -8.615850e-47 |
| Msa0515260 | Msa1061670 | 0.849974 | 2.291272e-60 | -8.615850e-47 |
| Msa0515260 | Msa1061760 | 0.806923 | 6.498444e-50 | -8.615850e-47 |
| Msa0515260 | Msa1076520 | -0.801139 | 1.036787e-48 | -8.615850e-47 |
| Msa0515260 | Msa1076830 | 0.831068 | 2.058425e-55 | -8.615850e-47 |
| Msa0515260 | Msa1081610 | 0.815406 | 9.398921e-52 | -8.615850e-47 |
| Msa0515260 | Msa1091000 | 0.802103 | 6.576228e-49 | -8.615850e-47 |
| Msa0515260 | Msa1100560 | 0.801357 | 9.356023e-49 | -8.615850e-47 |
| Msa0515260 | Msa1106960 | 0.840914 | 6.526566e-58 | -8.615850e-47 |
| Msa0515260 | Msa1109880 | 0.836127 | 1.122392e-56 | -8.615850e-47 |
| Msa0515260 | Msa1109890 | 0.871771 | 5.300070e-67 | -8.615850e-47 |
| Msa0515260 | Msa1112730 | 0.813709 | 2.231376e-51 | -8.615850e-47 |
| Msa0515260 | Msa1132560 | 0.847498 | 1.113182e-59 | -8.615850e-47 |
| Msa0515260 | Msa1133860 | 0.813437 | 2.561270e-51 | -8.615850e-47 |
| Msa0515260 | Msa1149020 | 0.844520 | 7.186299e-59 | -8.615850e-47 |
| Msa0515260 | Msa1150880 | 0.809028 | 2.316803e-50 | -8.615850e-47 |
| Msa0515260 | Msa1155630 | 0.807054 | 6.095823e-50 | -8.615850e-47 |
| Msa0515260 | Msa1164240 | 0.813537 | 2.434168e-51 | -8.615850e-47 |
| Msa0515260 | Msa1166530 | 0.820428 | 6.894950e-53 | -8.615850e-47 |
| Msa0515260 | Msa1179170 | 0.809008 | 2.339350e-50 | -8.615850e-47 |
| Msa0515260 | Msa1182800 | -0.806993 | 6.279788e-50 | -8.615850e-47 |
| Msa0515260 | Msa1182830 | -0.801743 | 7.797447e-49 | -8.615850e-47 |
| Msa0515260 | Msa1207480 | 0.847110 | 1.422313e-59 | -8.615850e-47 |
| Msa0515260 | Msa1211390 | -0.814378 | 1.588267e-51 | -8.615850e-47 |
| Msa0515260 | Msa1214960 | 0.828892 | 6.981900e-55 | -8.615850e-47 |
| Msa0515260 | Msa1216600 | 0.874650 | 5.723332e-68 | -8.615850e-47 |
| Msa0515260 | Msa1219780 | 0.825454 | 4.646437e-54 | -8.615850e-47 |
| Msa0515260 | Msa1221170 | 0.805842 | 1.097942e-49 | -8.615850e-47 |
| Msa0515260 | Msa1222030 | 0.826412 | 2.751448e-54 | -8.615850e-47 |
| Msa0515260 | Msa1233650 | 0.825145 | 5.497669e-54 | -8.615850e-47 |
| Msa0515260 | Msa1239830 | 0.820964 | 5.193930e-53 | -8.615850e-47 |
| Msa0515260 | Msa1262810 | 0.811302 | 7.491667e-51 | -8.615850e-47 |
| Msa0515260 | Msa1265500 | 0.800735 | 1.253638e-48 | -8.615850e-47 |
| Msa0515260 | Msa1266710 | 0.813486 | 2.497905e-51 | -8.615850e-47 |
| Msa0515260 | Msa1269050 | 0.844159 | 8.985108e-59 | -8.615850e-47 |
| Msa0515260 | Msa1281130 | 0.820740 | 5.845644e-53 | -8.615850e-47 |
| Msa0515260 | Msa1286420 | 0.828282 | 9.802132e-55 | -8.615850e-47 |
| Msa0515260 | Msa1296870 | 0.870200 | 1.746041e-66 | -8.615850e-47 |
| Msa0515260 | Msa1300610 | 0.837969 | 3.798618e-57 | -8.615850e-47 |
| Msa0515260 | Msa1306200 | -0.803551 | 3.303019e-49 | -8.615850e-47 |
| Msa0515260 | Msa1314040 | 0.812719 | 3.679308e-51 | -8.615850e-47 |
| Msa0515260 | Msa1314710 | 0.830430 | 2.950739e-55 | -8.615850e-47 |
| Msa0515260 | Msa1319290 | 0.818983 | 1.474425e-52 | -8.615850e-47 |
| Msa0515260 | Msa1320330 | 0.827172 | 1.812117e-54 | -8.615850e-47 |
| Msa0515260 | Msa1323030 | 0.867041 | 1.832579e-65 | -8.615850e-47 |
| Msa0515260 | Msa1323120 | 0.831695 | 1.442593e-55 | -8.615850e-47 |
| Msa0515260 | Msa1323160 | 0.872532 | 2.958784e-67 | -8.615850e-47 |
| Msa0515260 | Msa1329740 | 0.857333 | 1.753740e-62 | -8.615850e-47 |
| Msa0515260 | Msa1350490 | 0.803179 | 3.944446e-49 | -8.615850e-47 |
| Msa0515260 | Msa1357490 | 0.974548 | 2.381661e-138 | -8.615850e-47 |
| Msa0515260 | Msa1357750 | 0.831553 | 1.564104e-55 | -8.615850e-47 |
| Msa0515260 | Msa1357860 | 0.811140 | 8.123346e-51 | -8.615850e-47 |
| Msa0515260 | Msa1370930 | 0.834176 | 3.486005e-56 | -8.615850e-47 |
| Msa0515260 | Msa1373560 | 0.821041 | 4.985066e-53 | -8.615850e-47 |
| Msa0515260 | Msa1376070 | 0.836962 | 6.881189e-57 | -8.615850e-47 |
| Msa0515260 | Msa1377520 | 0.825785 | 3.878755e-54 | -8.615850e-47 |
| Msa0515260 | Msa1378400 | 0.840556 | 8.097077e-58 | -8.615850e-47 |
| Msa0515260 | Msa1378950 | 0.810696 | 1.013591e-50 | -8.615850e-47 |
| Msa0515260 | Msa1380490 | 0.887064 | 1.980596e-72 | -8.615850e-47 |
| Msa0515260 | Msa1382180 | 0.804974 | 1.669255e-49 | -8.615850e-47 |
| Msa0515260 | Msa1386120 | 0.819998 | 8.649318e-53 | -8.615850e-47 |
| Msa0515260 | Msa1386260 | 0.836121 | 1.126692e-56 | -8.615850e-47 |
| Msa0515260 | Msa1393440 | 0.861975 | 7.028024e-64 | -8.615850e-47 |
| Msa0515260 | Msa1395690 | 0.852936 | 3.327287e-61 | -8.615850e-47 |
| Msa0515260 | Msa1396550 | 0.807152 | 5.810412e-50 | -8.615850e-47 |
| Msa0515260 | Msa1407210 | 0.826294 | 2.935566e-54 | -8.615850e-47 |
| Msa0515260 | Msa1407670 | 0.860277 | 2.311276e-63 | -8.615850e-47 |
| Msa0515260 | Msa1411550 | 0.813501 | 2.479024e-51 | -8.615850e-47 |
| Msa0515260 | Msa1413090 | 0.816745 | 4.719633e-52 | -8.615850e-47 |
| Msa0515260 | Msa1420020 | 0.844653 | 6.618261e-59 | -8.615850e-47 |
| Msa0515260 | Msa1421120 | 0.838461 | 2.836953e-57 | -8.615850e-47 |
| Msa0515260 | Msa1426420 | 0.875127 | 3.935963e-68 | -8.615850e-47 |
| Msa0515260 | Msa1427670 | 0.819316 | 1.238265e-52 | -8.615850e-47 |
| Msa0515260 | Msa1445900 | 0.844500 | 7.276901e-59 | -8.615850e-47 |
| Msa0515260 | Msa1447790 | 0.803562 | 3.285881e-49 | -8.615850e-47 |
| Msa0515260 | Msa1449770 | 0.856156 | 3.893075e-62 | -8.615850e-47 |
| Msa0515260 | Msa1452920 | 0.830200 | 3.358224e-55 | -8.615850e-47 |
| Msa0515260 | Msa1459610 | 0.858822 | 6.327965e-63 | -8.615850e-47 |
| Msa0515260 | Msa1460310 | 0.828757 | 7.526020e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515260 | MtrunA17_Chr3g0124301 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 4.99e-120 | 335 |
| Msa0515260 | MtrunA17_Chr3g0115561 | 39.189 | 148 | 82 | 3 | 11 | 152 | 8 | 153 | 1.73e-31 | 110 |
| Msa0515260 | MtrunA17_Chr2g0283801 | 32.704 | 159 | 96 | 7 | 1 | 152 | 1 | 155 | 1.20e-22 | 88.6 |
| Msa0515260 | MtrunA17_Chr2g0316151 | 29.688 | 128 | 85 | 3 | 24 | 151 | 42 | 164 | 3.40e-13 | 63.9 |
| Msa0515260 | MtrunA17_Chr2g0316111 | 29.688 | 128 | 85 | 3 | 24 | 151 | 42 | 164 | 3.82e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515260 | AT5G10130.1 | 46.914 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 6.84e-46 | 147 |
| Msa0515260 | AT4G08685.1 | 40.000 | 165 | 87 | 4 | 1 | 159 | 1 | 159 | 2.70e-36 | 123 |
| Msa0515260 | AT1G78040.1 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0515260 | AT1G78040.3 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0515260 | AT1G78040.2 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0515260 | AT1G29140.1 | 35.669 | 157 | 92 | 3 | 4 | 152 | 6 | 161 | 2.57e-26 | 98.2 |
| Msa0515260 | AT5G45880.1 | 39.024 | 123 | 70 | 3 | 25 | 143 | 35 | 156 | 4.40e-23 | 90.1 |
| Msa0515260 | AT4G18596.1 | 33.117 | 154 | 90 | 4 | 1 | 142 | 1 | 153 | 1.86e-22 | 88.2 |
| Msa0515260 | AT4G18596.2 | 33.117 | 154 | 90 | 4 | 1 | 142 | 47 | 199 | 4.72e-22 | 88.6 |
Find 45 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATTGTGTTGCTGTTAA+TGG | 0.278593 | 3_4:-66389010 | Msa0515260:CDS |
| AATAAACACAACCTTTGATA+TGG | 0.316996 | 3_4:+66388941 | None:intergenic |
| GTGTATTACACGATGATATT+GGG | 0.373900 | 3_4:+66388491 | None:intergenic |
| GGTGTATTACACGATGATAT+TGG | 0.406710 | 3_4:+66388490 | None:intergenic |
| CACTGGAACATACAACATAA+TGG | 0.429786 | 3_4:-66388563 | Msa0515260:CDS |
| CGTCCATAGTCTTCCTGTCT+TGG | 0.431661 | 3_4:+66388617 | None:intergenic |
| ACAAGTAATATTTGAGGAGT+TGG | 0.437901 | 3_4:+66388344 | None:intergenic |
| TAAAGGGAGGATAGAGATGA+GGG | 0.446926 | 3_4:+66388981 | None:intergenic |
| AAATGCTATGGGTTACTTCA+AGG | 0.456909 | 3_4:-66388392 | Msa0515260:CDS |
| TAGGTGCAAAGGTGGGAATT+CGG | 0.460306 | 3_4:-66388642 | Msa0515260:CDS |
| TGGGAATTCGGTGCCAAGAC+AGG | 0.469322 | 3_4:-66388630 | Msa0515260:CDS |
| TATTGTGATACTTGCCGTGC+TGG | 0.471219 | 3_4:-66388922 | Msa0515260:CDS |
| GTGCCAAGACAGGAAGACTA+TGG | 0.475430 | 3_4:-66388620 | Msa0515260:CDS |
| TCTTCACTATGCAAATGCTA+TGG | 0.481660 | 3_4:-66388404 | Msa0515260:CDS |
| TAGCATTTGCATAGTGAAGA+TGG | 0.484441 | 3_4:+66388407 | None:intergenic |
| GATCTGTTACGCCCAGGGTC+CGG | 0.486304 | 3_4:+66388469 | None:intergenic |
| AACATAGCTGTGGCAAGTAA+AGG | 0.486675 | 3_4:+66388964 | None:intergenic |
| ACATAGCTGTGGCAAGTAAA+GGG | 0.489307 | 3_4:+66388965 | None:intergenic |
| GGAGGATAGAGATGAGGGAA+AGG | 0.493157 | 3_4:+66388986 | None:intergenic |
| AGGAGTTGGTGGCAATATTG+AGG | 0.508425 | 3_4:+66388358 | None:intergenic |
| AATCAGACAAGTAATATTTG+AGG | 0.510401 | 3_4:+66388338 | None:intergenic |
| TGCTGGATCTGTTACGCCCA+GGG | 0.512778 | 3_4:+66388464 | None:intergenic |
| AGTAATATTTGAGGAGTTGG+TGG | 0.513246 | 3_4:+66388347 | None:intergenic |
| GTAGTGAGTGAGCACAATGC+TGG | 0.521929 | 3_4:+66388447 | None:intergenic |
| GAGGATAGAGATGAGGGAAA+GGG | 0.521934 | 3_4:+66388987 | None:intergenic |
| ATGCTGGATCTGTTACGCCC+AGG | 0.535067 | 3_4:+66388463 | None:intergenic |
| CTTCACTATGCAAATGCTAT+GGG | 0.535954 | 3_4:-66388403 | Msa0515260:CDS |
| TCGTGTAATACACCGGACCC+TGG | 0.543647 | 3_4:-66388481 | Msa0515260:CDS |
| TTGCATAGTGAAGATGGTTG+AGG | 0.549905 | 3_4:+66388413 | None:intergenic |
| TTCTTGATTAGGTGCAAAGG+TGG | 0.550705 | 3_4:-66388650 | Msa0515260:intron |
| CGTGTAATACACCGGACCCT+GGG | 0.556675 | 3_4:-66388480 | Msa0515260:CDS |
| TGGTGGCAATATTGAGGCAA+AGG | 0.557338 | 3_4:+66388364 | None:intergenic |
| CATTATGTTGTATGTTCCAG+TGG | 0.561706 | 3_4:+66388564 | None:intergenic |
| GTAAAGGGAGGATAGAGATG+AGG | 0.562442 | 3_4:+66388980 | None:intergenic |
| CATTGCTAATCATCATGGCA+AGG | 0.587013 | 3_4:-66389029 | None:intergenic |
| CGATTCTTGATTAGGTGCAA+AGG | 0.587702 | 3_4:-66388653 | Msa0515260:intron |
| ACAGCTATGTTCCATATCAA+AGG | 0.587960 | 3_4:-66388952 | Msa0515260:CDS |
| GAAGGAGTGACAGATTCCAC+TGG | 0.617675 | 3_4:-66388580 | Msa0515260:CDS |
| TTGGATGTAAAATGTGGCGT+TGG | 0.634933 | 3_4:+66388891 | None:intergenic |
| CGTTGGTTTCGAATCCAGCA+CGG | 0.637233 | 3_4:+66388908 | None:intergenic |
| TCTTGATTAGGTGCAAAGGT+GGG | 0.642740 | 3_4:-66388649 | Msa0515260:intron |
| AATATCATCGTGTAATACAC+CGG | 0.667061 | 3_4:-66388488 | Msa0515260:CDS |
| TTTACCTTGGATGTAAAATG+TGG | 0.673598 | 3_4:+66388885 | None:intergenic |
| TTTGATATGGAACATAGCTG+TGG | 0.697489 | 3_4:+66388954 | None:intergenic |
| TAGCTGTGGCAAGTAAAGGG+AGG | 0.702643 | 3_4:+66388968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAAAAAATTTACGTTA+AGG | + | chr3_4:66388489-66388508 | None:intergenic | 15.0% |
| ! | AATAAACACAACCTTTGATA+TGG | + | chr3_4:66388404-66388423 | None:intergenic | 25.0% |
| ! | AATCAGACAAGTAATATTTG+AGG | + | chr3_4:66389007-66389026 | None:intergenic | 25.0% |
| TTTACCTTGGATGTAAAATG+TGG | + | chr3_4:66388460-66388479 | None:intergenic | 30.0% | |
| TGTAAAATGTACACATGATC+AGG | + | chr3_4:66388560-66388579 | None:intergenic | 30.0% | |
| TATTGTGACGATTCTTGATT+AGG | - | chr3_4:66388681-66388700 | Msa0515260:intron | 30.0% | |
| ! | CAGTTTTGCAAATATTGTCA+TGG | + | chr3_4:66388818-66388837 | None:intergenic | 30.0% |
| GTGTATTACACGATGATATT+GGG | + | chr3_4:66388854-66388873 | None:intergenic | 30.0% | |
| AATATCATCGTGTAATACAC+CGG | - | chr3_4:66388854-66388873 | Msa0515260:intron | 30.0% | |
| ACAAGTAATATTTGAGGAGT+TGG | + | chr3_4:66389001-66389020 | None:intergenic | 30.0% | |
| ! | AAGGATTGTGTTGCTGTTAA+TGG | - | chr3_4:66388332-66388351 | Msa0515260:CDS | 35.0% |
| TTTGATATGGAACATAGCTG+TGG | + | chr3_4:66388391-66388410 | None:intergenic | 35.0% | |
| ACAGCTATGTTCCATATCAA+AGG | - | chr3_4:66388390-66388409 | Msa0515260:CDS | 35.0% | |
| GTTAAGGTGTGTATTTACCT+TGG | + | chr3_4:66388473-66388492 | None:intergenic | 35.0% | |
| ! | TATGGACGAAGTTTTCTACA+CGG | - | chr3_4:66388740-66388759 | Msa0515260:intron | 35.0% |
| CATTATGTTGTATGTTCCAG+TGG | + | chr3_4:66388781-66388800 | None:intergenic | 35.0% | |
| CACTGGAACATACAACATAA+TGG | - | chr3_4:66388779-66388798 | Msa0515260:intron | 35.0% | |
| GGTGTATTACACGATGATAT+TGG | + | chr3_4:66388855-66388874 | None:intergenic | 35.0% | |
| TAGCATTTGCATAGTGAAGA+TGG | + | chr3_4:66388938-66388957 | None:intergenic | 35.0% | |
| TCTTCACTATGCAAATGCTA+TGG | - | chr3_4:66388938-66388957 | Msa0515260:CDS | 35.0% | |
| CTTCACTATGCAAATGCTAT+GGG | - | chr3_4:66388939-66388958 | Msa0515260:CDS | 35.0% | |
| ! | AAATGCTATGGGTTACTTCA+AGG | - | chr3_4:66388950-66388969 | Msa0515260:CDS | 35.0% |
| AGTAATATTTGAGGAGTTGG+TGG | + | chr3_4:66388998-66389017 | None:intergenic | 35.0% | |
| TAAAGGGAGGATAGAGATGA+GGG | + | chr3_4:66388364-66388383 | None:intergenic | 40.0% | |
| ACATAGCTGTGGCAAGTAAA+GGG | + | chr3_4:66388380-66388399 | None:intergenic | 40.0% | |
| AACATAGCTGTGGCAAGTAA+AGG | + | chr3_4:66388381-66388400 | None:intergenic | 40.0% | |
| TTGGATGTAAAATGTGGCGT+TGG | + | chr3_4:66388454-66388473 | None:intergenic | 40.0% | |
| ! | AACGCCACATTTTACATCCA+AGG | - | chr3_4:66388453-66388472 | Msa0515260:CDS | 40.0% |
| CGATTCTTGATTAGGTGCAA+AGG | - | chr3_4:66388689-66388708 | Msa0515260:intron | 40.0% | |
| TTCTTGATTAGGTGCAAAGG+TGG | - | chr3_4:66388692-66388711 | Msa0515260:intron | 40.0% | |
| TCTTGATTAGGTGCAAAGGT+GGG | - | chr3_4:66388693-66388712 | Msa0515260:intron | 40.0% | |
| GTGCTCACTCACTACAAAAA+TGG | - | chr3_4:66388903-66388922 | Msa0515260:CDS | 40.0% | |
| TTGCATAGTGAAGATGGTTG+AGG | + | chr3_4:66388932-66388951 | None:intergenic | 40.0% | |
| GAGGATAGAGATGAGGGAAA+GGG | + | chr3_4:66388358-66388377 | None:intergenic | 45.0% | |
| GTAAAGGGAGGATAGAGATG+AGG | + | chr3_4:66388365-66388384 | None:intergenic | 45.0% | |
| TATTGTGATACTTGCCGTGC+TGG | - | chr3_4:66388420-66388439 | Msa0515260:CDS | 45.0% | |
| TAGGTGCAAAGGTGGGAATT+CGG | - | chr3_4:66388700-66388719 | Msa0515260:intron | 45.0% | |
| ! | GACGAAGTTTTCTACACGGA+AGG | - | chr3_4:66388744-66388763 | Msa0515260:intron | 45.0% |
| TGGTGGCAATATTGAGGCAA+AGG | + | chr3_4:66388981-66389000 | None:intergenic | 45.0% | |
| !! | AGGAGTTGGTGGCAATATTG+AGG | + | chr3_4:66388987-66389006 | None:intergenic | 45.0% |
| GGAGGATAGAGATGAGGGAA+AGG | + | chr3_4:66388359-66388378 | None:intergenic | 50.0% | |
| TAGCTGTGGCAAGTAAAGGG+AGG | + | chr3_4:66388377-66388396 | None:intergenic | 50.0% | |
| !! | CGTTGGTTTCGAATCCAGCA+CGG | + | chr3_4:66388437-66388456 | None:intergenic | 50.0% |
| GTGCCAAGACAGGAAGACTA+TGG | - | chr3_4:66388722-66388741 | Msa0515260:intron | 50.0% | |
| CGTCCATAGTCTTCCTGTCT+TGG | + | chr3_4:66388728-66388747 | None:intergenic | 50.0% | |
| GAAGGAGTGACAGATTCCAC+TGG | - | chr3_4:66388762-66388781 | Msa0515260:intron | 50.0% | |
| GTAGTGAGTGAGCACAATGC+TGG | + | chr3_4:66388898-66388917 | None:intergenic | 50.0% | |
| !! | TGGGAATTCGGTGCCAAGAC+AGG | - | chr3_4:66388712-66388731 | Msa0515260:intron | 55.0% |
| TCGTGTAATACACCGGACCC+TGG | - | chr3_4:66388861-66388880 | Msa0515260:intron | 55.0% | |
| CGTGTAATACACCGGACCCT+GGG | - | chr3_4:66388862-66388881 | Msa0515260:intron | 55.0% | |
| TGCTGGATCTGTTACGCCCA+GGG | + | chr3_4:66388881-66388900 | None:intergenic | 55.0% | |
| ATGCTGGATCTGTTACGCCC+AGG | + | chr3_4:66388882-66388901 | None:intergenic | 55.0% | |
| GATCTGTTACGCCCAGGGTC+CGG | + | chr3_4:66388876-66388895 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 66388327 | 66389037 | 66388327 | ID=Msa0515260;Name=Msa0515260 |
| chr3_4 | mRNA | 66388327 | 66389037 | 66388327 | ID=Msa0515260-mRNA-1;Parent=Msa0515260;Name=Msa0515260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|160 |
| chr3_4 | exon | 66388890 | 66389037 | 66388890 | ID=Msa0515260-mRNA-1:exon:17082;Parent=Msa0515260-mRNA-1 |
| chr3_4 | exon | 66388327 | 66388661 | 66388327 | ID=Msa0515260-mRNA-1:exon:17081;Parent=Msa0515260-mRNA-1 |
| chr3_4 | CDS | 66388890 | 66389037 | 66388890 | ID=Msa0515260-mRNA-1:cds;Parent=Msa0515260-mRNA-1 |
| chr3_4 | CDS | 66388327 | 66388661 | 66388327 | ID=Msa0515260-mRNA-1:cds;Parent=Msa0515260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
