AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0655200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655200 MtrunA17_Chr4g0052521 97.332 1012 7 1 1 1012 1 992 0.0 1990
Msa0655200 MtrunA17_Chr2g0297051 79.804 1020 163 7 5 1011 41 1030 0.0 1604
Msa0655200 MtrunA17_Chr5g0397621 48.321 923 428 10 93 1009 14 893 0.0 827
Msa0655200 MtrunA17_Chr5g0397621 37.500 96 50 1 12 107 21 106 4.06e-11 67.4
Msa0655200 MtrunA17_Chr8g0339181 46.224 993 477 14 19 1001 6 951 0.0 788
Msa0655200 MtrunA17_Chr8g0374321 42.530 656 348 6 45 696 59 689 4.40e-171 517
Msa0655200 MtrunA17_Chr8g0374321 30.675 163 96 4 108 255 30 190 6.18e-14 76.3
Msa0655200 MtrunA17_Chr3g0136331 34.795 730 392 15 302 1001 210 885 3.24e-117 381
Msa0655200 MtrunA17_Chr4g0050431 36.835 695 360 14 340 1010 285 924 8.45e-117 382
Msa0655200 MtrunA17_Chr8g0374331 60.331 242 96 0 768 1009 1 242 1.34e-90 289
Msa0655200 MtrunA17_Chr8g0374391 60.000 235 94 0 775 1009 1 235 2.56e-86 277
Msa0655200 MtrunA17_Chr2g0297871 32.874 508 276 14 460 960 63 512 6.72e-69 243
Msa0655200 MtrunA17_Chr4g0071991 27.119 767 416 25 203 950 17 659 2.10e-65 239
Msa0655200 MtrunA17_Chr8g0374371 51.691 207 79 2 425 630 1 187 3.91e-63 213
Msa0655200 MtrunA17_Chr4g0053441 25.722 727 401 24 296 976 136 769 7.50e-36 146
Msa0655200 MtrunA17_Chr7g0263361 31.282 195 100 4 808 970 625 817 1.26e-20 98.6
Msa0655200 MtrunA17_Chr4g0072131 22.362 635 359 22 429 993 135 705 1.59e-20 97.8
Msa0655200 MtrunA17_Chr3g0138931 21.392 589 361 14 429 968 132 667 5.09e-20 96.3
Msa0655200 MtrunA17_Chr2g0298031 22.591 602 339 21 429 968 137 673 6.73e-20 95.9
Msa0655200 MtrunA17_Chr8g0365021 22.357 577 329 19 439 954 208 726 1.39e-19 95.1
Msa0655200 MtrunA17_Chr1g0148031 21.333 600 348 17 429 968 132 667 6.90e-19 92.8
Msa0655200 MtrunA17_Chr8g0340261 30.500 200 105 5 792 957 174 373 1.20e-18 90.9
Msa0655200 MtrunA17_Chr6g0452721 22.586 580 324 18 439 954 140 658 1.95e-18 91.3
Msa0655200 MtrunA17_Chr8g0346461 30.601 183 89 4 808 954 618 798 1.96e-18 91.3
Msa0655200 MtrunA17_Chr4g0059961 22.417 629 350 21 439 993 142 706 2.48e-18 90.9
Msa0655200 MtrunA17_Chr6g0456201 28.426 197 108 4 794 957 625 821 8.08e-18 89.4
Msa0655200 MtrunA17_Chr5g0401211 32.402 179 92 3 810 959 649 827 1.01e-17 89.0
Msa0655200 MtrunA17_Chr1g0147981 21.626 578 332 19 439 954 155 673 1.66e-17 88.2
Msa0655200 MtrunA17_Chr2g0298871 28.962 183 97 2 808 957 695 877 6.00e-17 86.7
Msa0655200 MtrunA17_Chr4g0020551 30.508 177 95 3 809 957 584 760 6.39e-17 86.3
Msa0655200 MtrunA17_Chr8g0382071 32.022 178 92 5 809 957 648 825 7.67e-17 86.3
Msa0655200 MtrunA17_Chr8g0335291 21.528 576 334 17 439 954 146 663 2.09e-16 84.7
Msa0655200 MtrunA17_Chr7g0260401 28.962 183 96 2 809 957 672 854 2.14e-16 84.7
Msa0655200 MtrunA17_Chr4g0054021 30.168 179 96 3 810 959 572 750 2.19e-16 84.3
Msa0655200 MtrunA17_Chr2g0333721 20.513 585 346 14 429 954 130 654 4.76e-16 83.6
Msa0655200 MtrunA17_Chr3g0134771 28.283 198 113 4 791 959 632 829 5.48e-16 83.2
Msa0655200 MtrunA17_Chr2g0304941 21.502 586 339 19 429 954 133 657 7.14e-16 82.8
Msa0655200 MtrunA17_Chr7g0276551 24.603 378 221 11 630 954 55 421 1.02e-15 82.0
Msa0655200 MtrunA17_Chr8g0355421 32.044 181 92 5 809 959 639 818 1.53e-15 82.0
Msa0655200 MtrunA17_Chr1g0173111 31.319 182 95 6 806 957 641 822 2.31e-15 81.3
Msa0655200 MtrunA17_Chr4g0065481 20.761 578 353 20 429 954 133 657 3.84e-15 80.5
Msa0655200 MtrunA17_Chr3g0134951 27.119 177 98 1 809 954 583 759 8.51e-15 79.3
Msa0655200 MtrunA17_Chr4g0002331 27.322 183 100 3 808 957 708 890 1.63e-14 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655200 AT5G44790.1 71.568 1027 245 7 1 1009 1 998 0.0 1457
Msa0655200 AT1G63440.1 46.748 984 472 10 35 1009 47 987 0.0 859
Msa0655200 AT1G63440.1 29.825 171 111 3 19 189 109 270 5.80e-12 70.5
Msa0655200 AT5G21930.2 35.876 708 378 16 323 999 213 875 1.12e-116 380
Msa0655200 AT5G21930.1 35.876 708 378 16 323 999 213 875 1.12e-116 380
Msa0655200 AT4G33520.2 35.475 716 379 14 300 999 270 918 3.81e-109 362
Msa0655200 AT4G33520.3 35.475 716 379 14 300 999 270 918 6.89e-109 361
Msa0655200 AT5G21930.3 34.605 708 364 17 323 999 213 852 7.47e-105 348
Msa0655200 AT5G21930.4 34.969 652 344 17 323 943 213 815 3.46e-94 318
Msa0655200 AT4G30110.1 27.464 761 421 21 203 950 13 655 9.23e-69 249
Msa0655200 AT4G30110.2 27.464 761 421 21 203 950 13 655 9.23e-69 249
Msa0655200 AT2G19110.2 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0655200 AT2G19110.3 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0655200 AT2G19110.1 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0655200 AT4G30120.2 29.897 388 212 8 393 779 4 332 1.51e-40 154
Msa0655200 AT4G30120.1 26.471 578 319 16 203 779 19 491 6.55e-40 156
Msa0655200 AT4G37270.1 26.128 643 349 19 356 950 181 745 3.09e-31 132
Msa0655200 AT3G57330.2 25.167 600 346 18 439 957 184 761 1.21e-26 118
Msa0655200 AT3G57330.1 25.167 600 346 18 439 957 239 816 1.38e-26 118
Msa0655200 AT2G41560.2 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0655200 AT2G41560.3 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0655200 AT2G41560.4 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0655200 AT2G41560.1 24.918 610 350 18 433 957 233 819 8.04e-26 115
Msa0655200 AT2G24520.3 23.761 585 343 15 437 968 113 647 5.14e-21 100
Msa0655200 AT2G24520.1 23.761 585 343 15 437 968 113 647 5.14e-21 100
Msa0655200 AT2G24520.2 23.761 585 343 15 437 968 176 710 6.36e-21 99.8
Msa0655200 AT1G07670.2 30.693 202 102 5 803 970 615 812 1.15e-19 95.9
Msa0655200 AT1G07670.1 30.693 202 102 5 803 970 615 812 1.15e-19 95.9
Msa0655200 AT1G07810.1 29.500 200 107 4 803 970 615 812 1.54e-19 95.5
Msa0655200 AT3G60330.4 22.997 574 333 16 437 954 134 654 7.82e-19 92.8
Msa0655200 AT3G60330.3 22.997 574 333 16 437 954 134 654 7.82e-19 92.8
Msa0655200 AT1G80660.2 21.622 592 335 17 427 954 4 530 1.22e-18 92.0
Msa0655200 AT3G60330.2 22.822 574 334 16 437 954 134 654 1.41e-18 92.0
Msa0655200 AT3G60330.1 22.822 574 334 16 437 954 134 654 1.41e-18 92.0
Msa0655200 AT1G80660.4 21.525 590 334 17 429 954 135 659 2.42e-18 91.3
Msa0655200 AT4G30190.1 21.635 587 337 18 429 954 130 654 2.65e-18 91.3
Msa0655200 AT1G80660.3 21.525 590 334 17 429 954 135 659 2.70e-18 91.3
Msa0655200 AT1G17260.1 21.579 570 341 16 439 954 144 661 3.01e-18 90.9
Msa0655200 AT1G80660.1 21.525 590 334 17 429 954 135 659 3.81e-18 90.9
Msa0655200 AT5G57350.4 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0655200 AT5G57350.2 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0655200 AT5G57350.1 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0655200 AT4G00900.2 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0655200 AT4G00900.1 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0655200 AT2G07560.1 21.843 586 336 19 429 954 133 656 8.11e-18 89.7
Msa0655200 AT5G62670.1 21.920 625 358 21 439 993 140 704 9.75e-18 89.4
Msa0655200 AT3G47950.1 21.890 635 346 20 439 993 144 708 2.77e-17 87.8
Msa0655200 AT3G47950.2 21.890 635 346 20 439 993 144 708 2.77e-17 87.8
Msa0655200 AT4G37640.1 30.168 179 96 3 810 959 649 827 6.22e-17 86.7
Msa0655200 AT4G29900.1 27.037 270 141 7 721 957 613 859 7.09e-17 86.7
Msa0655200 AT4G29900.2 27.037 270 141 7 721 957 613 859 7.09e-17 86.7
Msa0655200 AT3G63380.1 29.670 182 95 2 809 957 640 821 3.01e-16 84.7
Msa0655200 AT2G18960.3 21.331 586 340 18 429 954 66 590 3.34e-16 84.3
Msa0655200 AT2G18960.2 21.331 586 340 18 429 954 66 590 3.34e-16 84.3
Msa0655200 AT2G18960.1 21.331 586 340 18 429 954 130 654 4.01e-16 84.0
Msa0655200 AT2G22950.1 30.168 179 96 3 810 959 650 828 4.93e-16 84.0
Msa0655200 AT3G22910.1 30.769 182 93 4 809 957 636 817 5.91e-16 83.6
Msa0655200 AT5G57110.1 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0655200 AT5G57110.3 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0655200 AT5G57110.2 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0655200 AT1G10130.1 27.684 177 97 1 809 954 582 758 1.13e-15 82.8
Msa0655200 AT2G24520.4 23.724 392 233 8 630 968 26 404 1.19e-15 82.4
Msa0655200 AT3G42640.1 21.392 589 336 18 429 954 133 657 5.21e-15 80.5
Msa0655200 AT3G21180.1 26.066 211 123 3 780 957 662 872 6.13e-15 80.5
Msa0655200 AT5G57350.3 23.969 388 212 10 630 954 26 393 2.44e-14 78.2

Find 268 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4_3:+63668501 Msa0655200:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4_3:+63668355 Msa0655200:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4_3:+63668426 Msa0655200:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4_3:-63670967 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4_3:+63671360 Msa0655200:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4_3:+63668105 Msa0655200:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4_3:+63668362 Msa0655200:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4_3:+63667369 Msa0655200:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4_3:-63669002 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4_3:-63668479 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4_3:+63671419 Msa0655200:CDS
CAAGTAAATTTACAATAAAT+TGG 0.253790 4_3:-63672545 None:intergenic
CTTGAGTCAGATAATTAATT+TGG 0.256617 4_3:+63668969 Msa0655200:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4_3:+63667387 Msa0655200:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4_3:+63670438 Msa0655200:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4_3:+63670412 Msa0655200:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4_3:+63668217 Msa0655200:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4_3:-63670469 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4_3:+63668803 Msa0655200:CDS
TCAAGGAAAATGCACAAAAT+TGG 0.305293 4_3:-63672479 None:intergenic
TGTGTTGATGAGAGATAATT+TGG 0.310034 4_3:+63672136 Msa0655200:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4_3:-63671031 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4_3:+63668414 Msa0655200:CDS
AATACGAGAGAAAGGAAATA+AGG 0.323471 4_3:-63666611 None:intergenic
CGCTGATGGTATTGTTACCT+GGG 0.329723 4_3:+63668804 Msa0655200:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4_3:+63668182 Msa0655200:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4_3:-63667268 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4_3:-63671450 None:intergenic
CAAACTCATGTGTCCGTTCA+TGG 0.337981 4_3:+63672600 Msa0655200:three_prime_UTR
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4_3:+63668297 Msa0655200:CDS
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4_3:+63670267 Msa0655200:intron
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4_3:-63670925 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4_3:+63668415 Msa0655200:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4_3:-63667106 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4_3:+63668218 Msa0655200:CDS
AGGTTGGCATTCAAGATGTT+AGG 0.358093 4_3:+63671943 Msa0655200:intron
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4_3:+63670546 Msa0655200:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4_3:-63667571 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4_3:+63667602 Msa0655200:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4_3:+63667229 Msa0655200:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4_3:+63668106 Msa0655200:intron
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4_3:+63671361 Msa0655200:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4_3:+63671013 Msa0655200:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4_3:+63671444 Msa0655200:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4_3:+63670974 Msa0655200:CDS
CGACGGAATTAACCGGATTC+AGG 0.380567 4_3:+63666767 Msa0655200:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4_3:+63672293 Msa0655200:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4_3:+63668152 Msa0655200:CDS
AGCTGAGATCTTACATGAAC+CGG 0.387930 4_3:+63667072 Msa0655200:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4_3:-63670122 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4_3:+63668265 Msa0655200:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4_3:+63670575 Msa0655200:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4_3:+63668343 Msa0655200:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4_3:+63671054 Msa0655200:CDS
CGGACACATGAGTTTGTTCA+TGG 0.400250 4_3:-63672593 None:intergenic
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4_3:+63667428 Msa0655200:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4_3:+63668298 Msa0655200:CDS
GGTTTCAACCGGACCTAAAC+CGG 0.406822 4_3:+63667093 Msa0655200:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4_3:+63668831 Msa0655200:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4_3:-63670341 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4_3:-63668505 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4_3:+63670411 Msa0655200:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4_3:-63668148 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4_3:+63671454 Msa0655200:CDS
AAGAAGATTATTGTGTTTGG+TGG 0.427442 4_3:-63666480 None:intergenic
ATGAGTTTGTTCATGGAGAT+AGG 0.433842 4_3:-63672586 None:intergenic
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4_3:+63671235 Msa0655200:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4_3:-63667570 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4_3:+63672246 Msa0655200:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4_3:-63668724 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4_3:-63672254 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4_3:-63667101 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4_3:+63671404 Msa0655200:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4_3:+63670374 Msa0655200:CDS
AGAATGTGAATACGAGAGAA+AGG 0.448955 4_3:-63666619 None:intergenic
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4_3:-63668871 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4_3:+63670551 Msa0655200:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4_3:-63672383 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4_3:+63668883 Msa0655200:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4_3:+63668223 Msa0655200:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4_3:+63667577 Msa0655200:CDS
TTACATGAACCGGTTTCAAC+CGG 0.457960 4_3:+63667082 Msa0655200:CDS
CTCTCTCTCTCGAGAAATCA+TGG 0.460989 4_3:+63666644 Msa0655200:exon
GTCATTTAAAATTCCTTCAA+CGG 0.461784 4_3:-63667182 None:intergenic
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4_3:+63671318 Msa0655200:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4_3:-63672234 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4_3:+63667295 Msa0655200:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4_3:+63667372 Msa0655200:CDS
TCAACGACGACGGAATTAAC+CGG 0.465540 4_3:+63666760 Msa0655200:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4_3:+63667380 Msa0655200:CDS
GGTTTAGGTCCGGTTGAAAC+CGG 0.466163 4_3:-63667091 None:intergenic
GACTGTATCGGATCCTACTT+TGG 0.467006 4_3:-63668947 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4_3:+63667043 Msa0655200:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4_3:+63672077 Msa0655200:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4_3:+63672304 Msa0655200:CDS
GATTGGATTATTTGAGATGG+AGG 0.472917 4_3:-63666415 None:intergenic
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4_3:-63666691 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4_3:+63667564 Msa0655200:CDS
CACAATGTTATTGACGCCTC+AGG 0.477200 4_3:+63672668 Msa0655200:three_prime_UTR
CGGTGATTCTGACCTGAATC+CGG 0.483249 4_3:-63666779 None:intergenic
AAGTATTGTGGCCGTGCTCT+TGG 0.485752 4_3:+63669044 Msa0655200:CDS
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4_3:+63667495 Msa0655200:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4_3:+63668174 Msa0655200:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4_3:-63671331 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4_3:+63668160 Msa0655200:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4_3:+63667413 Msa0655200:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4_3:+63670369 Msa0655200:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4_3:+63671437 Msa0655200:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.498291 4_3:+63666780 Msa0655200:CDS
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4_3:+63667412 Msa0655200:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4_3:+63672245 Msa0655200:CDS
ACAGATTGGATTATTTGAGA+TGG 0.506312 4_3:-63666418 None:intergenic
CGTTATTACTTTGGAGATGT+GGG 0.506990 4_3:+63668161 Msa0655200:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4_3:+63672247 Msa0655200:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4_3:+63672065 Msa0655200:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4_3:-63669001 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4_3:-63670378 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4_3:+63671420 Msa0655200:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4_3:-63672228 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4_3:+63670495 Msa0655200:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4_3:-63666688 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4_3:+63672083 Msa0655200:CDS
GGTTGGCATTCAAGATGTTA+GGG 0.513253 4_3:+63671944 Msa0655200:intron
CATTCAAGATGTTAGGGCAG+AGG 0.513441 4_3:+63671950 Msa0655200:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4_3:-63671496 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4_3:+63671278 Msa0655200:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4_3:+63670405 Msa0655200:CDS
GAAGGTGATACGATACAGAT+TGG 0.516326 4_3:-63666432 None:intergenic
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4_3:+63667381 Msa0655200:CDS
TACATTTGAACAATGAGTGC+AGG 0.518273 4_3:-63672512 None:intergenic
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4_3:+63670941 Msa0655200:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4_3:+63668934 Msa0655200:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4_3:+63671963 Msa0655200:CDS
TTGTTCATGGAGATAGGTAG+AGG 0.521805 4_3:-63672580 None:intergenic
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4_3:+63671968 Msa0655200:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4_3:-63671344 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4_3:+63670395 Msa0655200:CDS
GGACATGAGAGCGGCTTCAA+CGG 0.527618 4_3:-63666829 None:intergenic
TGCTGTTTCACCATCTCCAT+CGG 0.527914 4_3:+63666510 Msa0655200:five_prime_UTR
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4_3:-63671978 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4_3:+63670413 Msa0655200:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4_3:+63670509 Msa0655200:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4_3:-63668147 None:intergenic
TAAGGAAGATGTATTTAAAG+AGG 0.531880 4_3:-63666593 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4_3:+63668198 Msa0655200:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4_3:+63670467 Msa0655200:CDS
GCAAGCGGCGCATGTCATGC+CGG 0.533829 4_3:-63666799 None:intergenic
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4_3:-63668930 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4_3:-63668458 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4_3:+63668978 Msa0655200:CDS
AAAGAGTAGTAACTTACAAA+GGG 0.538032 4_3:+63672430 Msa0655200:three_prime_UTR
AACAGATATAGAAAACATAA+GGG 0.538427 4_3:-63670340 None:intergenic
GCCGCTCTCATGTCCGTCGA+CGG 0.539449 4_3:+63666837 Msa0655200:CDS
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4_3:+63668107 Msa0655200:intron
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4_3:+63666690 Msa0655200:CDS
TAAAGAGTAGTAACTTACAA+AGG 0.541634 4_3:+63672429 Msa0655200:three_prime_UTR
GAGTATATGAATGGGATATG+AGG 0.542597 4_3:-63668139 None:intergenic
ATTGGATTATTTGAGATGGA+GGG 0.543204 4_3:-63666414 None:intergenic
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4_3:+63671405 Msa0655200:CDS
TACAAAGGGTGCAAATGAGT+TGG 0.547463 4_3:+63672444 Msa0655200:three_prime_UTR
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4_3:+63672286 Msa0655200:CDS
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4_3:+63671255 Msa0655200:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4_3:+63671479 Msa0655200:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4_3:-63668821 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4_3:+63672211 Msa0655200:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4_3:-63668911 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4_3:-63666669 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4_3:+63672016 Msa0655200:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4_3:+63670536 Msa0655200:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4_3:-63670948 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4_3:+63666678 Msa0655200:CDS
ATTGTGGCCGTGCTCTTGGA+TGG 0.556931 4_3:+63669048 Msa0655200:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4_3:+63671019 Msa0655200:CDS
AGTGTATCTCATATGTGCGT+TGG 0.557667 4_3:+63672642 Msa0655200:three_prime_UTR
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4_3:+63672019 Msa0655200:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4_3:+63670877 Msa0655200:intron
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4_3:+63671351 Msa0655200:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4_3:-63667112 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4_3:+63667169 Msa0655200:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4_3:-63672062 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4_3:+63670590 Msa0655200:CDS
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4_3:+63671339 Msa0655200:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4_3:+63670441 Msa0655200:CDS
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4_3:+63671245 Msa0655200:intron
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4_3:+63671018 Msa0655200:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4_3:+63668441 Msa0655200:CDS
ACGAACATCTTCGAGATCGC+CGG 0.573489 4_3:-63666709 None:intergenic
TCATGGATGATTGGTTGAAG+TGG 0.573589 4_3:+63668191 Msa0655200:CDS
GTGCAGGCGAGAGGAGCTCA+AGG 0.573659 4_3:-63672496 None:intergenic
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4_3:+63671319 Msa0655200:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4_3:-63668749 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4_3:+63670141 Msa0655200:CDS
TTGGAGCATACCCAGATGAA+TGG 0.578362 4_3:+63670286 Msa0655200:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4_3:+63671017 Msa0655200:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4_3:-63668802 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4_3:+63668790 Msa0655200:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4_3:-63667490 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4_3:+63670975 Msa0655200:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4_3:+63668279 Msa0655200:CDS
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4_3:+63672070 Msa0655200:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4_3:+63671482 Msa0655200:CDS
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4_3:-63668787 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4_3:-63670553 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4_3:+63668904 Msa0655200:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4_3:-63666697 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4_3:+63670578 Msa0655200:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4_3:+63666672 Msa0655200:CDS
TGCTGATTATGTAAGTATTG+TGG 0.591215 4_3:+63669032 Msa0655200:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4_3:-63672249 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4_3:+63668517 Msa0655200:CDS
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4_3:+63668442 Msa0655200:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4_3:+63671977 Msa0655200:CDS
TTCAACGGAGTTAGAGCAAG+CGG 0.598928 4_3:-63666814 None:intergenic
TGCACAAAATTGGAATCACA+AGG 0.599250 4_3:-63672469 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4_3:-63668184 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4_3:-63672302 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4_3:+63667414 Msa0655200:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4_3:+63668769 Msa0655200:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4_3:+63667097 Msa0655200:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4_3:+63672026 Msa0655200:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4_3:+63671362 Msa0655200:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4_3:+63672084 Msa0655200:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4_3:+63667108 Msa0655200:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4_3:+63668861 Msa0655200:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4_3:+63668886 Msa0655200:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4_3:-63668306 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4_3:+63670423 Msa0655200:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4_3:-63672278 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4_3:+63668192 Msa0655200:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4_3:+63671248 Msa0655200:CDS
TGTTCATGGAGATAGGTAGA+GGG 0.634625 4_3:-63672579 None:intergenic
TTTCAATAGAAACCTCGTCA+AGG 0.635047 4_3:+63666908 Msa0655200:CDS
GAACAATGAGTGCAGGCGAG+AGG 0.636024 4_3:-63672505 None:intergenic
GGCTTGAATTACACCGTCGA+CGG 0.636046 4_3:-63666850 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4_3:-63668803 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4_3:+63667130 Msa0655200:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4_3:-63668959 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4_3:-63667635 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4_3:-63670538 None:intergenic
AAGACAGGAACTCTAACTCA+GGG 0.647613 4_3:+63670510 Msa0655200:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4_3:+63668108 Msa0655200:intron
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4_3:+63667115 Msa0655200:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4_3:-63666898 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4_3:-63672299 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4_3:+63671040 Msa0655200:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4_3:+63668838 Msa0655200:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4_3:+63672285 Msa0655200:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4_3:+63668443 Msa0655200:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4_3:-63670575 None:intergenic
ATTAGCGTTAAACCTTGACG+AGG 0.671055 4_3:-63666920 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4_3:-63667457 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4_3:+63667419 Msa0655200:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4_3:+63667133 Msa0655200:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4_3:+63672020 Msa0655200:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4_3:-63670377 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4_3:+63670558 Msa0655200:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4_3:+63667147 Msa0655200:CDS
AACGTGGAAGATAGAACCTG+AGG 0.692439 4_3:-63672684 None:intergenic
GACACCAACTGCTGTCATGG+TGG 0.692490 4_3:+63670398 Msa0655200:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4_3:-63666838 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4_3:-63670402 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4_3:-63672264 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4_3:+63668805 Msa0655200:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4_3:-63671011 None:intergenic
GCACAAAATTGGAATCACAA+GGG 0.719506 4_3:-63672468 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4_3:+63670978 Msa0655200:CDS
ACTTCAACCAATCATCCATG+AGG 0.728611 4_3:-63668189 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4_3:+63667111 Msa0655200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG + chr4_3:63670247-63670266 Msa0655200:intron 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG + chr4_3:63671515-63671534 Msa0655200:intron 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG - chr4_3:63668693-63668712 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG - chr4_3:63669897-63669916 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG + chr4_3:63671104-63671123 Msa0655200:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG + chr4_3:63671519-63671538 Msa0655200:intron 15.0%
!! CAAGTAAATTTACAATAAAT+TGG - chr4_3:63672548-63672567 None:intergenic 15.0%
!! AAAAAGAAGATTATTGTGTT+TGG - chr4_3:63666486-63666505 None:intergenic 20.0%
!! ATTTAAAGAGGAAAGAAAAA+AGG - chr4_3:63666584-63666603 None:intergenic 20.0%
!! AAATATGGCTATAGATTAAA+GGG - chr4_3:63667663-63667682 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG - chr4_3:63667678-63667697 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG + chr4_3:63667676-63667695 Msa0655200:intron 20.0%
!! CAAGAAACTAAACAAAATAA+GGG - chr4_3:63668037-63668056 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG - chr4_3:63668038-63668057 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG + chr4_3:63668415-63668434 Msa0655200:CDS 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG + chr4_3:63668697-63668716 Msa0655200:intron 20.0%
!! TACACTATCTATTGAAATTT+GGG - chr4_3:63669455-63669474 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG - chr4_3:63669456-63669475 None:intergenic 20.0%
!!! TTATTGATTCCAATTATTTC+AGG + chr4_3:63669926-63669945 Msa0655200:intron 20.0%
!! ATAAACATGAGTTTGAATTA+TGG - chr4_3:63669964-63669983 None:intergenic 20.0%
!! AACAGATATAGAAAACATAA+GGG - chr4_3:63670343-63670362 None:intergenic 20.0%
!! TAAAATGCCAAAACATTATT+AGG - chr4_3:63670766-63670785 None:intergenic 20.0%
!!! GTGTTTTGGTAAAATTTTTT+TGG + chr4_3:63671068-63671087 Msa0655200:intron 20.0%
!!! ATGACAGTTATAACAAATTT+TGG + chr4_3:63671869-63671888 Msa0655200:intron 20.0%
!!! TGACAGTTATAACAAATTTT+GGG + chr4_3:63671870-63671889 Msa0655200:intron 20.0%
!!! AATTTTTTAACGAAAGTGGA+AGG - chr4_3:63666453-63666472 None:intergenic 25.0%
! TAAGGAAGATGTATTTAAAG+AGG - chr4_3:63666596-63666615 None:intergenic 25.0%
!!! TTTGTTTTGAAGTAAAGCAA+CGG - chr4_3:63666877-63666896 None:intergenic 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG + chr4_3:63666982-63667001 Msa0655200:intron 25.0%
! TGTTGAATTATTTAAACCCT+AGG + chr4_3:63667009-63667028 Msa0655200:intron 25.0%
! TTCTTAATATCTTCATCCTA+GGG - chr4_3:63667028-63667047 None:intergenic 25.0%
! ATTCTTAATATCTTCATCCT+AGG - chr4_3:63667029-63667048 None:intergenic 25.0%
!! GTCATTTAAAATTCCTTCAA+CGG - chr4_3:63667185-63667204 None:intergenic 25.0%
! CAAATATGGCTATAGATTAA+AGG - chr4_3:63667664-63667683 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG + chr4_3:63667912-63667931 Msa0655200:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG - chr4_3:63668150-63668169 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG - chr4_3:63668151-63668170 None:intergenic 25.0%
! TCATATACTCGTTATTACTT+TGG + chr4_3:63668152-63668171 Msa0655200:CDS 25.0%
! GCTTATAACATTTGTATTGT+TGG + chr4_3:63668414-63668433 Msa0655200:CDS 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG + chr4_3:63668517-63668536 Msa0655200:CDS 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG + chr4_3:63668563-63668582 Msa0655200:intron 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG + chr4_3:63668566-63668585 Msa0655200:intron 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG + chr4_3:63668567-63668586 Msa0655200:intron 25.0%
! AACCTAAATATAAGACAATC+AGG - chr4_3:63668607-63668626 None:intergenic 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG + chr4_3:63668618-63668637 Msa0655200:intron 25.0%
! AAGTTATGTAAATGAGAGTA+TGG + chr4_3:63668831-63668850 Msa0655200:CDS 25.0%
! CTTGAGTCAGATAATTAATT+TGG + chr4_3:63668969-63668988 Msa0655200:CDS 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG - chr4_3:63669021-63669040 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG - chr4_3:63669022-63669041 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG - chr4_3:63669248-63669267 None:intergenic 25.0%
! CTGATACCATGTTAAAATTT+GGG - chr4_3:63669249-63669268 None:intergenic 25.0%
! TCTGATACCATGTTAAAATT+TGG - chr4_3:63669250-63669269 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG - chr4_3:63669454-63669473 None:intergenic 25.0%
!!! GGATTCAACAGTTTTATATT+AGG - chr4_3:63669564-63669583 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG - chr4_3:63669664-63669683 None:intergenic 25.0%
!! GTATGCATTTTTACTTAGTT+TGG + chr4_3:63669665-63669684 Msa0655200:intron 25.0%
! AAAATATTGTTCTGACTCTA+CGG - chr4_3:63669845-63669864 None:intergenic 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG + chr4_3:63669932-63669951 Msa0655200:intron 25.0%
! AATGTATCTTAAGTCATTTG+TGG - chr4_3:63670051-63670070 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG + chr4_3:63670060-63670079 Msa0655200:intron 25.0%
! AAAATATGTACACAGAAGTA+AGG - chr4_3:63670236-63670255 None:intergenic 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG + chr4_3:63670258-63670277 Msa0655200:intron 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG + chr4_3:63670259-63670278 Msa0655200:intron 25.0%
! CAACAGATATAGAAAACATA+AGG - chr4_3:63670344-63670363 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG + chr4_3:63670344-63670363 Msa0655200:CDS 25.0%
! AACAATGGTGTGTTAATTAA+AGG + chr4_3:63670438-63670457 Msa0655200:CDS 25.0%
! TACGTTATATTTGATAAGAC+AGG + chr4_3:63670495-63670514 Msa0655200:CDS 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG - chr4_3:63670695-63670714 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG + chr4_3:63670756-63670775 Msa0655200:intron 25.0%
!! TAATTCATTGGCATCATTTT+GGG - chr4_3:63670969-63670988 None:intergenic 25.0%
!! TTAATTCATTGGCATCATTT+TGG - chr4_3:63670970-63670989 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG + chr4_3:63670975-63670994 Msa0655200:CDS 25.0%
!! TAATGAAGGAATATGTTTTG+TGG + chr4_3:63671118-63671137 Msa0655200:intron 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG + chr4_3:63671170-63671189 Msa0655200:intron 25.0%
! AGTATGATTAAAACCATAAC+TGG + chr4_3:63671700-63671719 Msa0655200:intron 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG + chr4_3:63671743-63671762 Msa0655200:intron 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG + chr4_3:63671923-63671942 Msa0655200:intron 25.0%
! ATTGAATTATGTATTTGCCA+TGG + chr4_3:63672211-63672230 Msa0655200:CDS 25.0%
! TAAAGAGTAGTAACTTACAA+AGG + chr4_3:63672429-63672448 Msa0655200:three_prime_UTR 25.0%
! AAAGAGTAGTAACTTACAAA+GGG + chr4_3:63672430-63672449 Msa0655200:three_prime_UTR 25.0%
! ATTGGATTATTTGAGATGGA+GGG - chr4_3:63666417-63666436 None:intergenic 30.0%
ACAGATTGGATTATTTGAGA+TGG - chr4_3:63666421-63666440 None:intergenic 30.0%
!!! CAGCAATTTTTTAACGAAAG+TGG - chr4_3:63666457-63666476 None:intergenic 30.0%
AAGAAGATTATTGTGTTTGG+TGG - chr4_3:63666483-63666502 None:intergenic 30.0%
! AGAAAAAAGAGTTTTTCCGA+TGG - chr4_3:63666529-63666548 None:intergenic 30.0%
ATGGAAAATGGAGAGAAAAA+AGG - chr4_3:63666558-63666577 None:intergenic 30.0%
GAAAAAAGGTGAATGGAAAA+TGG - chr4_3:63666570-63666589 None:intergenic 30.0%
AATACGAGAGAAAGGAAATA+AGG - chr4_3:63666614-63666633 None:intergenic 30.0%
! GGAATTTTAAATGACATCAC+CGG + chr4_3:63667190-63667209 Msa0655200:CDS 30.0%
! AGTCAAGATGAGATTGTTTT+AGG + chr4_3:63667346-63667365 Msa0655200:CDS 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG + chr4_3:63667347-63667366 Msa0655200:CDS 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG + chr4_3:63667348-63667367 Msa0655200:CDS 30.0%
! TGCTTTAAACTCAAACCTTA+GGG + chr4_3:63667796-63667815 Msa0655200:intron 30.0%
TTATGGAGCATAAAATTCTG+TGG - chr4_3:63667871-63667890 None:intergenic 30.0%
! ACAGAATTTTATGCTCCATA+AGG + chr4_3:63667870-63667889 Msa0655200:intron 30.0%
! CAGAATTTTATGCTCCATAA+GGG + chr4_3:63667871-63667890 Msa0655200:intron 30.0%
CGTTAGATGAAATTTCTGTA+TGG - chr4_3:63667914-63667933 None:intergenic 30.0%
CTATAAAAAAAACGATGACG+CGG - chr4_3:63667946-63667965 None:intergenic 30.0%
TAGAAATGGTTCAACAAACA+TGG + chr4_3:63668279-63668298 Msa0655200:CDS 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG + chr4_3:63668426-63668445 Msa0655200:CDS 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG + chr4_3:63668568-63668587 Msa0655200:intron 30.0%
GTCCTGATTGTCTTATATTT+AGG + chr4_3:63668602-63668621 Msa0655200:intron 30.0%
!! AGAACTTTTAATGTGTCACT+AGG - chr4_3:63668766-63668785 None:intergenic 30.0%
! GATAATTAATTTGGTCGAGA+CGG + chr4_3:63668978-63668997 Msa0655200:CDS 30.0%
! TGCTGATTATGTAAGTATTG+TGG + chr4_3:63669032-63669051 Msa0655200:CDS 30.0%
TTTCCCAATACTATCAATGT+AGG - chr4_3:63669126-63669145 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG + chr4_3:63669383-63669402 Msa0655200:intron 30.0%
CTAACTCATCCTTAAAAAAC+CGG - chr4_3:63669430-63669449 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG - chr4_3:63669496-63669515 None:intergenic 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG + chr4_3:63669634-63669653 Msa0655200:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG - chr4_3:63669640-63669659 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG - chr4_3:63669694-63669713 None:intergenic 30.0%
AAATATTGTTCTGACTCTAC+GGG - chr4_3:63669844-63669863 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG - chr4_3:63669938-63669957 None:intergenic 30.0%
CATTATTGACACTATTGTGT+TGG + chr4_3:63670141-63670160 Msa0655200:CDS 30.0%
!! AAATTTTAGGTATACTGCTG+GGG + chr4_3:63670260-63670279 Msa0655200:intron 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG - chr4_3:63670315-63670334 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG + chr4_3:63670441-63670460 Msa0655200:CDS 30.0%
ATTTCTATGATGCCTATTAG+AGG + chr4_3:63670803-63670822 Msa0655200:intron 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG - chr4_3:63670818-63670837 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG - chr4_3:63670928-63670947 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG + chr4_3:63670974-63670993 Msa0655200:CDS 30.0%
! CATAAGTATTTCTACTGAAG+TGG + chr4_3:63671278-63671297 Msa0655200:CDS 30.0%
GAAATATATACAAACCTCCT+TGG - chr4_3:63671499-63671518 None:intergenic 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG + chr4_3:63671555-63671574 Msa0655200:intron 30.0%
TATAAAACTATCCCTATCCA+CGG - chr4_3:63671664-63671683 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG - chr4_3:63671742-63671761 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG + chr4_3:63671898-63671917 Msa0655200:intron 30.0%
!!! AAATGTGTTTTTTGACAGGT+TGG + chr4_3:63671927-63671946 Msa0655200:intron 30.0%
! CAACTATACTACCATCTTTT+TGG - chr4_3:63672013-63672032 None:intergenic 30.0%
! TGTGTTGATGAGAGATAATT+TGG + chr4_3:63672136-63672155 Msa0655200:CDS 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG - chr4_3:63672386-63672405 None:intergenic 30.0%
TCAAGGAAAATGCACAAAAT+TGG - chr4_3:63672482-63672501 None:intergenic 30.0%
! AGTTCATTTTAAGCCATGAA+CGG - chr4_3:63672616-63672635 None:intergenic 30.0%
! GATTGGATTATTTGAGATGG+AGG - chr4_3:63666418-63666437 None:intergenic 35.0%
GAGGAAAGAAAAAAGGTGAA+TGG - chr4_3:63666577-63666596 None:intergenic 35.0%
AGAATGTGAATACGAGAGAA+AGG - chr4_3:63666622-63666641 None:intergenic 35.0%
GTGGAAGTTAGTTGAATACT+CGG - chr4_3:63666672-63666691 None:intergenic 35.0%
AGTATTCAACTAACTTCCAC+CGG + chr4_3:63666672-63666691 Msa0655200:CDS 35.0%
GTTTCTATTGAAAACGACGT+CGG - chr4_3:63666901-63666920 None:intergenic 35.0%
TTTCAATAGAAACCTCGTCA+AGG + chr4_3:63666908-63666927 Msa0655200:CDS 35.0%
AAGAATGCAATTGAAGATGC+AGG + chr4_3:63667043-63667062 Msa0655200:CDS 35.0%
TCTTCTTTGCTTATCACGTT+TGG - chr4_3:63667271-63667290 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG + chr4_3:63667295-63667314 Msa0655200:CDS 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG + chr4_3:63667403-63667422 Msa0655200:CDS 35.0%
AGTATGCTTAGTGGTATGAA+AGG + chr4_3:63667412-63667431 Msa0655200:CDS 35.0%
GTATGCTTAGTGGTATGAAA+GGG + chr4_3:63667413-63667432 Msa0655200:CDS 35.0%
TATGCTTAGTGGTATGAAAG+GGG + chr4_3:63667414-63667433 Msa0655200:CDS 35.0%
ACATTAAGCTCACTCAACAA+AGG - chr4_3:63667460-63667479 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG - chr4_3:63667493-63667512 None:intergenic 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG + chr4_3:63667495-63667514 Msa0655200:CDS 35.0%
! CTGCTTTAAACTCAAACCTT+AGG + chr4_3:63667795-63667814 Msa0655200:intron 35.0%
TTACATCAGCAGAATCAGAA+AGG - chr4_3:63667843-63667862 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG - chr4_3:63667888-63667907 None:intergenic 35.0%
CACAAATCAATGCAAAAGCA+TGG - chr4_3:63668070-63668089 None:intergenic 35.0%
GAGTATATGAATGGGATATG+AGG - chr4_3:63668142-63668161 None:intergenic 35.0%
! TCGTTATTACTTTGGAGATG+TGG + chr4_3:63668160-63668179 Msa0655200:CDS 35.0%
! CGTTATTACTTTGGAGATGT+GGG + chr4_3:63668161-63668180 Msa0655200:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG + chr4_3:63668217-63668236 Msa0655200:CDS 35.0%
! TGGTGAGTGTCATTCAATTT+GGG + chr4_3:63668218-63668237 Msa0655200:CDS 35.0%
! AGTGTCATTCAATTTGGGAT+TGG + chr4_3:63668223-63668242 Msa0655200:CDS 35.0%
! TATTTGGAATGTCTTGCCAA+GGG + chr4_3:63668442-63668461 Msa0655200:CDS 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG - chr4_3:63668482-63668501 None:intergenic 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG - chr4_3:63668727-63668746 None:intergenic 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG - chr4_3:63668933-63668952 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG + chr4_3:63668934-63668953 Msa0655200:CDS 35.0%
TATCTGACTCAAGACTGTAT+CGG - chr4_3:63668962-63668981 None:intergenic 35.0%
! AAACTTTTGAATGGGAGCTT+TGG - chr4_3:63669013-63669032 None:intergenic 35.0%
ATAAAAACCATCCAAGAGCA+CGG - chr4_3:63669058-63669077 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG - chr4_3:63669121-63669140 None:intergenic 35.0%
! CTGCCTACATTGATAGTATT+GGG + chr4_3:63669120-63669139 Msa0655200:intron 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG + chr4_3:63669177-63669196 Msa0655200:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr4_3:63669224-63669243 None:intergenic 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG + chr4_3:63669240-63669259 Msa0655200:intron 35.0%
! TGAGAGAGTATATAAAGAGG+AGG + chr4_3:63669386-63669405 Msa0655200:intron 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG + chr4_3:63669428-63669447 Msa0655200:intron 35.0%
AATATAGCCAATCCAAAGCT+TGG + chr4_3:63669505-63669524 Msa0655200:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG - chr4_3:63669623-63669642 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG + chr4_3:63669681-63669700 Msa0655200:intron 35.0%
! TAACTCAGGTACCATTCTTT+TGG + chr4_3:63670074-63670093 Msa0655200:intron 35.0%
AATGACAGAGCTACAATTGT+AGG - chr4_3:63670125-63670144 None:intergenic 35.0%
! TTGACACTATTGTGTTGGTA+AGG + chr4_3:63670146-63670165 Msa0655200:intron 35.0%
ACATAAGGGCAAAAACAAAG+TGG - chr4_3:63670329-63670348 None:intergenic 35.0%
CCAGTTTAAGAAATTCTCCA+CGG - chr4_3:63670578-63670597 None:intergenic 35.0%
TGGAGAATTTCTTAAACTGG+TGG + chr4_3:63670578-63670597 Msa0655200:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG - chr4_3:63670741-63670760 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG - chr4_3:63670800-63670819 None:intergenic 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG - chr4_3:63670981-63671000 None:intergenic 35.0%
CCAATGAATTAAAATCAGGG+TGG + chr4_3:63670978-63670997 Msa0655200:CDS 35.0%
! AAGGAATATGTTTTGTGGAG+AGG + chr4_3:63671123-63671142 Msa0655200:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG + chr4_3:63671206-63671225 Msa0655200:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG - chr4_3:63671210-63671229 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG + chr4_3:63671361-63671380 Msa0655200:CDS 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG + chr4_3:63671362-63671381 Msa0655200:CDS 35.0%
AGAAGCTTCTGTTGTTATAG+AGG + chr4_3:63671404-63671423 Msa0655200:CDS 35.0%
GAAGCTTCTGTTGTTATAGA+GGG + chr4_3:63671405-63671424 Msa0655200:CDS 35.0%
TTATCTCCTGTAACCATTAC+AGG - chr4_3:63671453-63671472 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG + chr4_3:63671454-63671473 Msa0655200:CDS 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG - chr4_3:63671593-63671612 None:intergenic 35.0%
! GAAAACCAACATCTTTTGCA+TGG + chr4_3:63671594-63671613 Msa0655200:intron 35.0%
ATGTTCCATGCAAAAGATGT+TGG - chr4_3:63671602-63671621 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG + chr4_3:63671601-63671620 Msa0655200:intron 35.0%
TGAAAAACAAAATTGAGCCG+TGG + chr4_3:63671644-63671663 Msa0655200:intron 35.0%
TTGGGCAGATATTGATGTTA+TGG + chr4_3:63671888-63671907 Msa0655200:intron 35.0%
GTTCGTTCATTCCAAAAAGA+TGG + chr4_3:63671999-63672018 Msa0655200:CDS 35.0%
AGATGGTAGTATAGTTGCAA+TGG + chr4_3:63672016-63672035 Msa0655200:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG - chr4_3:63672237-63672256 None:intergenic 35.0%
GCACAAAATTGGAATCACAA+GGG - chr4_3:63672471-63672490 None:intergenic 35.0%
TGCACAAAATTGGAATCACA+AGG - chr4_3:63672472-63672491 None:intergenic 35.0%
TACATTTGAACAATGAGTGC+AGG - chr4_3:63672515-63672534 None:intergenic 35.0%
! ATGAGTTTGTTCATGGAGAT+AGG - chr4_3:63672589-63672608 None:intergenic 35.0%
GAAGGTGATACGATACAGAT+TGG - chr4_3:63666435-63666454 None:intergenic 40.0%
! AAGAGTTTTTCCGATGGAGA+TGG - chr4_3:63666523-63666542 None:intergenic 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG - chr4_3:63666745-63666764 None:intergenic 40.0%
!!! GTTTTGAAGTAAAGCAACGG+AGG - chr4_3:63666874-63666893 None:intergenic 40.0%
ATTAGCGTTAAACCTTGACG+AGG - chr4_3:63666923-63666942 None:intergenic 40.0%
AGCTGAGATCTTACATGAAC+CGG + chr4_3:63667072-63667091 Msa0655200:CDS 40.0%
! TTACATGAACCGGTTTCAAC+CGG + chr4_3:63667082-63667101 Msa0655200:CDS 40.0%
TAAACCGGTTGGAGATAGTA+CGG + chr4_3:63667108-63667127 Msa0655200:CDS 40.0%
CATCACCGGAGTAAAAAAAG+CGG + chr4_3:63667204-63667223 Msa0655200:CDS 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG + chr4_3:63667229-63667248 Msa0655200:CDS 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG + chr4_3:63667355-63667374 Msa0655200:CDS 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG + chr4_3:63667369-63667388 Msa0655200:CDS 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG + chr4_3:63667372-63667391 Msa0655200:CDS 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG + chr4_3:63667380-63667399 Msa0655200:CDS 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG + chr4_3:63667381-63667400 Msa0655200:CDS 40.0%
TAGAAGCCATTCTCGCATAA+GGG - chr4_3:63667573-63667592 None:intergenic 40.0%
TTAGAAGCCATTCTCGCATA+AGG - chr4_3:63667574-63667593 None:intergenic 40.0%
CAGAGAGTTCGTCTATGTTT+CGG + chr4_3:63667602-63667621 Msa0655200:CDS 40.0%
CATTCTACACTAACACCCTA+AGG - chr4_3:63667814-63667833 None:intergenic 40.0%
ATCAGCAGAATCAGAAAGGA+TGG - chr4_3:63667839-63667858 None:intergenic 40.0%
TGGAGCATAAAATTCTGTGG+AGG - chr4_3:63667868-63667887 None:intergenic 40.0%
AATTACCCCCATGAAGAAGA+GGG - chr4_3:63668116-63668135 None:intergenic 40.0%
AAATTACCCCCATGAAGAAG+AGG - chr4_3:63668117-63668136 None:intergenic 40.0%
AACCAATCATCCATGAGGAA+AGG - chr4_3:63668187-63668206 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG - chr4_3:63668192-63668211 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG + chr4_3:63668191-63668210 Msa0655200:CDS 40.0%
! CATGGATGATTGGTTGAAGT+GGG + chr4_3:63668192-63668211 Msa0655200:CDS 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG + chr4_3:63668265-63668284 Msa0655200:CDS 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG + chr4_3:63668298-63668317 Msa0655200:CDS 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG + chr4_3:63668343-63668362 Msa0655200:CDS 40.0%
! GTATTTGGAATGTCTTGCCA+AGG + chr4_3:63668441-63668460 Msa0655200:CDS 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG + chr4_3:63668443-63668462 Msa0655200:CDS 40.0%
ACAACCAATAAAGCTGTTGC+AGG - chr4_3:63668508-63668527 None:intergenic 40.0%
! GTCACTAGGTTGAATAAGCA+AGG - chr4_3:63668752-63668771 None:intergenic 40.0%
GACACATTAAAAGTTCTGCC+TGG + chr4_3:63668769-63668788 Msa0655200:CDS 40.0%
ATTTACATAACTTGAGCCCC+AGG - chr4_3:63668824-63668843 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG + chr4_3:63668838-63668857 Msa0655200:CDS 40.0%
GAGATCAATGCATCTGTCAT+TGG + chr4_3:63668883-63668902 Msa0655200:CDS 40.0%
ATCAATGCATCTGTCATTGG+AGG + chr4_3:63668886-63668905 Msa0655200:CDS 40.0%
AAGGACACCATGCAAATTGA+TGG - chr4_3:63668914-63668933 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG - chr4_3:63669122-63669141 None:intergenic 40.0%
! CCTGCCTACATTGATAGTAT+TGG + chr4_3:63669119-63669138 Msa0655200:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG - chr4_3:63669158-63669177 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG - chr4_3:63669159-63669178 None:intergenic 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG + chr4_3:63669180-63669199 Msa0655200:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr4_3:63669222-63669241 Msa0655200:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG + chr4_3:63669264-63669283 Msa0655200:intron 40.0%
TCAGAGCTTGTCGAATTCAA+GGG + chr4_3:63669265-63669284 Msa0655200:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG - chr4_3:63669421-63669440 None:intergenic 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG + chr4_3:63669418-63669437 Msa0655200:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG - chr4_3:63669515-63669534 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG + chr4_3:63669514-63669533 Msa0655200:intron 40.0%
ACTGTTGAATCCTTGTGACA+TGG + chr4_3:63669572-63669591 Msa0655200:intron 40.0%
CACAATGAGTTGCAAAGAGT+CGG + chr4_3:63669769-63669788 Msa0655200:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG + chr4_3:63669786-63669805 Msa0655200:intron 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG + chr4_3:63670467-63670486 Msa0655200:CDS 40.0%
TAAGACAGGAACTCTAACTC+AGG + chr4_3:63670509-63670528 Msa0655200:CDS 40.0%
AAGACAGGAACTCTAACTCA+GGG + chr4_3:63670510-63670529 Msa0655200:CDS 40.0%
CCGTGGAGAATTTCTTAAAC+TGG + chr4_3:63670575-63670594 Msa0655200:CDS 40.0%
AGCAGAGAGTAACCATCATT+GGG - chr4_3:63670621-63670640 None:intergenic 40.0%
AAGCAGAGAGTAACCATCAT+TGG - chr4_3:63670622-63670641 None:intergenic 40.0%
CTCATTGTCAAAAAGGTGGA+AGG - chr4_3:63670734-63670753 None:intergenic 40.0%
TGAGCTCATTGTCAAAAAGG+TGG - chr4_3:63670738-63670757 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG - chr4_3:63670896-63670915 None:intergenic 40.0%
AGGAACACATGTCTCATTAG+AGG + chr4_3:63671143-63671162 Msa0655200:intron 40.0%
! TGAGGAAGTATGTTCTGATC+AGG + chr4_3:63671224-63671243 Msa0655200:intron 40.0%
GAAGTATGTTCTGATCAGGT+TGG + chr4_3:63671228-63671247 Msa0655200:intron 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG + chr4_3:63671319-63671338 Msa0655200:CDS 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG + chr4_3:63671360-63671379 Msa0655200:CDS 40.0%
AACAAAATTGAGCCGTGGAT+AGG + chr4_3:63671649-63671668 Msa0655200:intron 40.0%
ACAAAATTGAGCCGTGGATA+GGG + chr4_3:63671650-63671669 Msa0655200:intron 40.0%
CTTGAAAACGAGACCAGTTA+TGG - chr4_3:63671716-63671735 None:intergenic 40.0%
AGGTTGGCATTCAAGATGTT+AGG + chr4_3:63671943-63671962 Msa0655200:intron 40.0%
GGTTGGCATTCAAGATGTTA+GGG + chr4_3:63671944-63671963 Msa0655200:intron 40.0%
TGGTAGTATAGTTGCAATGG+TGG + chr4_3:63672019-63672038 Msa0655200:CDS 40.0%
GGTAGTATAGTTGCAATGGT+GGG + chr4_3:63672020-63672039 Msa0655200:CDS 40.0%
GGCAATAATATTGTAGGCCA+TGG - chr4_3:63672231-63672250 None:intergenic 40.0%
CAGTGAAGGAAATAAAACCC+CGG - chr4_3:63672267-63672286 None:intergenic 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG + chr4_3:63672266-63672285 Msa0655200:CDS 40.0%
! TACAAAGGGTGCAAATGAGT+TGG + chr4_3:63672444-63672463 Msa0655200:three_prime_UTR 40.0%
TGTTCATGGAGATAGGTAGA+GGG - chr4_3:63672582-63672601 None:intergenic 40.0%
TTGTTCATGGAGATAGGTAG+AGG - chr4_3:63672583-63672602 None:intergenic 40.0%
AGTGTATCTCATATGTGCGT+TGG + chr4_3:63672642-63672661 Msa0655200:three_prime_UTR 40.0%
!! TGCTGTTTCACCATCTCCAT+CGG + chr4_3:63666510-63666529 Msa0655200:five_prime_UTR 45.0%
CTCTCTCTCTCGAGAAATCA+TGG + chr4_3:63666644-63666663 Msa0655200:exon 45.0%
AAAAACGACGTCAACGACGA+CGG + chr4_3:63666750-63666769 Msa0655200:CDS 45.0%
TCAACGACGACGGAATTAAC+CGG + chr4_3:63666760-63666779 Msa0655200:CDS 45.0%
TTCAACGGAGTTAGAGCAAG+CGG - chr4_3:63666817-63666836 None:intergenic 45.0%
! GTACTATCTCCAACCGGTTT+AGG - chr4_3:63667109-63667128 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG - chr4_3:63667212-63667231 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG + chr4_3:63667387-63667406 Msa0655200:CDS 45.0%
TTAGTGGTATGAAAGGGGTG+AGG + chr4_3:63667419-63667438 Msa0655200:CDS 45.0%
TAGAAGCCCTTATGCGAGAA+TGG + chr4_3:63667564-63667583 Msa0655200:CDS 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG + chr4_3:63667577-63667596 Msa0655200:CDS 45.0%
ACTCACACTAAGAAGCAAGC+TGG - chr4_3:63667638-63667657 None:intergenic 45.0%
TCAGATTCCCCTCTTCTTCA+TGG + chr4_3:63668105-63668124 Msa0655200:intron 45.0%
CAGATTCCCCTCTTCTTCAT+GGG + chr4_3:63668106-63668125 Msa0655200:intron 45.0%
AGATTCCCCTCTTCTTCATG+GGG + chr4_3:63668107-63668126 Msa0655200:intron 45.0%
ATTACCCCCATGAAGAAGAG+GGG - chr4_3:63668115-63668134 None:intergenic 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG + chr4_3:63668198-63668217 Msa0655200:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG + chr4_3:63668297-63668316 Msa0655200:CDS 45.0%
CTGTAGTTCCCAAAGCAACA+AGG - chr4_3:63668309-63668328 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG + chr4_3:63668362-63668381 Msa0655200:CDS 45.0%
! CACTCCTGCAACAGCTTTAT+TGG + chr4_3:63668501-63668520 Msa0655200:CDS 45.0%
! TTTTCTAGATGGCAGACCTG+TGG + chr4_3:63668708-63668727 Msa0655200:intron 45.0%
CAGGTAACAATACCATCAGC+GGG - chr4_3:63668805-63668824 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG - chr4_3:63668806-63668825 None:intergenic 45.0%
CGCTGATGGTATTGTTACCT+GGG + chr4_3:63668804-63668823 Msa0655200:CDS 45.0%
GCTGATGGTATTGTTACCTG+GGG + chr4_3:63668805-63668824 Msa0655200:CDS 45.0%
CGAGTCTATACCTGTTTCGA+AGG + chr4_3:63668861-63668880 Msa0655200:CDS 45.0%
! GCATTGATCTCCTTCGAAAC+AGG - chr4_3:63668874-63668893 None:intergenic 45.0%
!! GGAGGTACCATCAATTTGCA+TGG + chr4_3:63668904-63668923 Msa0655200:CDS 45.0%
GACTGTATCGGATCCTACTT+TGG - chr4_3:63668950-63668969 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG - chr4_3:63669004-63669023 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG + chr4_3:63669142-63669161 Msa0655200:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG - chr4_3:63669151-63669170 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG - chr4_3:63669152-63669171 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr4_3:63669215-63669234 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr4_3:63669212-63669231 Msa0655200:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG - chr4_3:63669294-63669313 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG + chr4_3:63669142-63669161 Msa0655200:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG - chr4_3:63669151-63669170 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG - chr4_3:63669152-63669171 None:intergenic 45.0%
AGTCCCACATCGGATAGATA+AGG + chr4_3:63669152-63669171 Msa0655200:intron 45.0%
! GAGCCTTATCTATCCGATGT+GGG - chr4_3:63669365-63669384 None:intergenic 45.0%
! AGAGCCTTATCTATCCGATG+TGG - chr4_3:63669366-63669385 None:intergenic 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG - chr4_3:63669416-63669435 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG + chr4_3:63669518-63669537 Msa0655200:intron 45.0%
CATTGCTAGTCCATGTCACA+AGG - chr4_3:63669585-63669604 None:intergenic 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG - chr4_3:63669620-63669639 None:intergenic 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG + chr4_3:63669785-63669804 Msa0655200:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG + chr4_3:63670082-63670101 Msa0655200:intron 45.0%
CTACCTGCAAGCCAAAAGAA+TGG - chr4_3:63670088-63670107 None:intergenic 45.0%
TTGGAGCATACCCAGATGAA+TGG + chr4_3:63670286-63670305 Msa0655200:CDS 45.0%
! TTTTCGGCAGCCATTCATCT+GGG - chr4_3:63670299-63670318 None:intergenic 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG - chr4_3:63670300-63670319 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG + chr4_3:63670300-63670319 Msa0655200:CDS 45.0%
CACCATCTGAGCTCTTTCTA+AGG - chr4_3:63670472-63670491 None:intergenic 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG - chr4_3:63670895-63670914 None:intergenic 45.0%
GATGAGTCCTCTCTTACCAA+TGG + chr4_3:63670941-63670960 Msa0655200:CDS 45.0%
TTGGGATCCATTGGTAAGAG+AGG - chr4_3:63670951-63670970 None:intergenic 45.0%
!!! GGCATCATTTTGGGATCCAT+TGG - chr4_3:63670960-63670979 None:intergenic 45.0%
TGGAATAGCAGAGAAGTCTG+AGG - chr4_3:63671014-63671033 None:intergenic 45.0%
TCAGACTTCTCTGCTATTCC+AGG + chr4_3:63671013-63671032 Msa0655200:CDS 45.0%
ACTTCTCTGCTATTCCAGGA+AGG + chr4_3:63671017-63671036 Msa0655200:CDS 45.0%
CTTCTCTGCTATTCCAGGAA+GGG + chr4_3:63671018-63671037 Msa0655200:CDS 45.0%
TTCTCTGCTATTCCAGGAAG+GGG + chr4_3:63671019-63671038 Msa0655200:CDS 45.0%
GGTGTGCAGTGCATTATAGA+CGG + chr4_3:63671040-63671059 Msa0655200:CDS 45.0%
! TATAGACGGACAGCGTGTTT+TGG + chr4_3:63671054-63671073 Msa0655200:CDS 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG + chr4_3:63671235-63671254 Msa0655200:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG + chr4_3:63671318-63671337 Msa0655200:CDS 45.0%
ATACTCCATTGCACGCTACA+AGG - chr4_3:63671347-63671366 None:intergenic 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG + chr4_3:63671351-63671370 Msa0655200:CDS 45.0%
TATAGAGGGCCTCCAGAAAA+TGG + chr4_3:63671419-63671438 Msa0655200:CDS 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG + chr4_3:63671420-63671439 Msa0655200:CDS 45.0%
AATGGGAATCACGCCTGTAA+TGG + chr4_3:63671437-63671456 Msa0655200:CDS 45.0%
ATCACGCCTGTAATGGTTAC+AGG + chr4_3:63671444-63671463 Msa0655200:CDS 45.0%
CATTCAAGATGTTAGGGCAG+AGG + chr4_3:63671950-63671969 Msa0655200:CDS 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG + chr4_3:63672026-63672045 Msa0655200:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG + chr4_3:63672077-63672096 Msa0655200:CDS 45.0%
TTGGTATGGCAATTGGAGCT+GGG + chr4_3:63672084-63672103 Msa0655200:CDS 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG + chr4_3:63672265-63672284 Msa0655200:CDS 45.0%
! CGGACACATGAGTTTGTTCA+TGG - chr4_3:63672596-63672615 None:intergenic 45.0%
CAAACTCATGTGTCCGTTCA+TGG + chr4_3:63672600-63672619 Msa0655200:three_prime_UTR 45.0%
CACAATGTTATTGACGCCTC+AGG + chr4_3:63672668-63672687 Msa0655200:three_prime_UTR 45.0%
!!! AATATATTTTATTTAAATTC+AGG + chr4_3:63670856-63670875 Msa0655200:intron 5.0%
ACGAACATCTTCGAGATCGC+CGG - chr4_3:63666712-63666731 None:intergenic 50.0%
CGACGGAATTAACCGGATTC+AGG + chr4_3:63666767-63666786 Msa0655200:CDS 50.0%
CGGTGATTCTGACCTGAATC+CGG - chr4_3:63666782-63666801 None:intergenic 50.0%
CGGATTCAGGTCAGAATCAC+CGG + chr4_3:63666780-63666799 Msa0655200:CDS 50.0%
GGCTTGAATTACACCGTCGA+CGG - chr4_3:63666853-63666872 None:intergenic 50.0%
GGTTTAGGTCCGGTTGAAAC+CGG - chr4_3:63667094-63667113 None:intergenic 50.0%
GGTTTCAACCGGACCTAAAC+CGG + chr4_3:63667093-63667112 Msa0655200:CDS 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG - chr4_3:63667104-63667123 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG - chr4_3:63667115-63667134 None:intergenic 50.0%
GTTGGAGATAGTACGGTGGT+TGG + chr4_3:63667115-63667134 Msa0655200:CDS 50.0%
GTGGTTGGACAGTTCACGAT+CGG + chr4_3:63667130-63667149 Msa0655200:CDS 50.0%
GCGTGTGTGAATTCCGTTGA+AGG + chr4_3:63667169-63667188 Msa0655200:CDS 50.0%
CACCGGAGTAAAAAAAGCGG+TGG + chr4_3:63667207-63667226 Msa0655200:CDS 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG + chr4_3:63667210-63667229 Msa0655200:CDS 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG + chr4_3:63667428-63667447 Msa0655200:CDS 50.0%
GATTCCCCTCTTCTTCATGG+GGG + chr4_3:63668108-63668127 Msa0655200:intron 50.0%
GGCCTTTCCTCATGGATGAT+TGG + chr4_3:63668182-63668201 Msa0655200:CDS 50.0%
CTTCTGTATGGCGCTCTTAC+TGG + chr4_3:63668355-63668374 Msa0655200:CDS 50.0%
TCAGCGGGAATCTTTGTACC+AGG - chr4_3:63668790-63668809 None:intergenic 50.0%
GGTACAAAGATTCCCGCTGA+TGG + chr4_3:63668790-63668809 Msa0655200:CDS 50.0%
CCGCTGATGGTATTGTTACC+TGG + chr4_3:63668803-63668822 Msa0655200:CDS 50.0%
!! GAATGGGAGCTTTGGACATC+TGG - chr4_3:63669005-63669024 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG + chr4_3:63669044-63669063 Msa0655200:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG + chr4_3:63669202-63669221 Msa0655200:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr4_3:63669210-63669229 None:intergenic 50.0%
GGTGCGTGAATAGGTTTAGG+CGG - chr4_3:63669291-63669310 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG - chr4_3:63669300-63669319 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG + chr4_3:63669202-63669221 Msa0655200:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG - chr4_3:63669520-63669539 None:intergenic 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG + chr4_3:63669517-63669536 Msa0655200:intron 50.0%
! GAAGTATTTCCCACTAGGCG+GGG - chr4_3:63669618-63669637 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG - chr4_3:63669619-63669638 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG - chr4_3:63669806-63669825 None:intergenic 50.0%
AAGGAGCTCCAACGATCAGA+GGG - chr4_3:63669878-63669897 None:intergenic 50.0%
TAAGGAGCTCCAACGATCAG+AGG - chr4_3:63669879-63669898 None:intergenic 50.0%
ATTGCATGCCCATGTGCACT+TGG + chr4_3:63670369-63670388 Msa0655200:CDS 50.0%
ATGCCCATGTGCACTTGGTT+TGG + chr4_3:63670374-63670393 Msa0655200:CDS 50.0%
TCGCCAAACCAAGTGCACAT+GGG - chr4_3:63670380-63670399 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG + chr4_3:63670412-63670431 Msa0655200:CDS 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG + chr4_3:63670423-63670442 Msa0655200:CDS 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG + chr4_3:63670546-63670565 Msa0655200:CDS 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG + chr4_3:63670551-63670570 Msa0655200:CDS 50.0%
GTCCATTCCTGCAAACACCT+TGG - chr4_3:63670556-63670575 None:intergenic 50.0%
TAAACTGGTGGCTTCTGCTG+AGG + chr4_3:63670590-63670609 Msa0655200:CDS 50.0%
GCTGAGGTAACTCCCAATGA+TGG + chr4_3:63670606-63670625 Msa0655200:intron 50.0%
! GCGTGATTCCCATTTTCTGG+AGG - chr4_3:63671431-63671450 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG - chr4_3:63671434-63671453 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG + chr4_3:63671968-63671987 Msa0655200:CDS 50.0%
ACATCTGCAGCAGCTAATGC+AGG - chr4_3:63672065-63672084 None:intergenic 50.0%
GCATTAGCTGCTGCAGATGT+TGG + chr4_3:63672065-63672084 Msa0655200:CDS 50.0%
AGCTGCTGCAGATGTTGGTA+TGG + chr4_3:63672070-63672089 Msa0655200:CDS 50.0%
GTTGGTATGGCAATTGGAGC+TGG + chr4_3:63672083-63672102 Msa0655200:CDS 50.0%
AATAAAACCCCGGCAGCAAC+TGG - chr4_3:63672257-63672276 None:intergenic 50.0%
GGAAGCTTGATTCCCAGTGA+AGG - chr4_3:63672281-63672300 None:intergenic 50.0%
TGGGAATCAAGCTTCCACCA+TGG + chr4_3:63672285-63672304 Msa0655200:CDS 50.0%
GGGAATCAAGCTTCCACCAT+GGG + chr4_3:63672286-63672305 Msa0655200:CDS 50.0%
GGACATGAGAGCGGCTTCAA+CGG - chr4_3:63666832-63666851 None:intergenic 55.0%
TCAACCGGACCTAAACCGGT+TGG + chr4_3:63667097-63667116 Msa0655200:CDS 55.0%
ACCGGTTGGAGATAGTACGG+TGG + chr4_3:63667111-63667130 Msa0655200:CDS 55.0%
GTTGGACAGTTCACGATCGG+CGG + chr4_3:63667133-63667152 Msa0655200:CDS 55.0%
GATCGGCGGTATGACATGTG+CGG + chr4_3:63667147-63667166 Msa0655200:CDS 55.0%
GAGATGTGGGCCTTTCCTCA+TGG + chr4_3:63668174-63668193 Msa0655200:CDS 55.0%
GGCATCAGATGTCTTCCCCT+TGG - chr4_3:63668461-63668480 None:intergenic 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG + chr4_3:63669048-63669067 Msa0655200:CDS 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + chr4_3:63669307-63669326 Msa0655200:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG + chr4_3:63669605-63669624 Msa0655200:intron 55.0%
GATAGTGTTCCCCGCCTAGT+GGG + chr4_3:63669606-63669625 Msa0655200:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG + chr4_3:63669798-63669817 Msa0655200:intron 55.0%
TGCCTTACCCCTCTGATCGT+TGG + chr4_3:63669867-63669886 Msa0655200:intron 55.0%
CTCCAACGATCAGAGGGGTA+AGG - chr4_3:63669872-63669891 None:intergenic 55.0%
AGGAGCTCCAACGATCAGAG+GGG - chr4_3:63669877-63669896 None:intergenic 55.0%
AGGTATACTGCTGGGGCTCT+TGG + chr4_3:63670267-63670286 Msa0655200:intron 55.0%
GTCGCCAAACCAAGTGCACA+TGG - chr4_3:63670381-63670400 None:intergenic 55.0%
GTCATGGTGGCAACAGGTGT+TGG + chr4_3:63670411-63670430 Msa0655200:CDS 55.0%
! CATGGTGGCAACAGGTGTTG+GGG + chr4_3:63670413-63670432 Msa0655200:CDS 55.0%
AGCCACTGTCTCTGTTGCCA+AGG + chr4_3:63670536-63670555 Msa0655200:CDS 55.0%
CACCTTGGCAACAGAGACAG+TGG - chr4_3:63670541-63670560 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG + chr4_3:63670558-63670577 Msa0655200:CDS 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG + chr4_3:63671245-63671264 Msa0655200:intron 55.0%
TGGTAACAGGAAGCTGCTGG+TGG + chr4_3:63671248-63671267 Msa0655200:CDS 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG + chr4_3:63671255-63671274 Msa0655200:CDS 55.0%
CGCTACAAGGATCCCAGTCT+TGG - chr4_3:63671334-63671353 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG + chr4_3:63671339-63671358 Msa0655200:CDS 55.0%
AACTGCTCGAGCTGTTGCCA+AGG + chr4_3:63671479-63671498 Msa0655200:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG - chr4_3:63671981-63672000 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG + chr4_3:63672245-63672264 Msa0655200:CDS 55.0%
! AAGCTTCCACCATGGGTTGC+TGG + chr4_3:63672293-63672312 Msa0655200:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG - chr4_3:63672305-63672324 None:intergenic 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG + chr4_3:63672304-63672323 Msa0655200:CDS 55.0%
GAACAATGAGTGCAGGCGAG+AGG - chr4_3:63672508-63672527 None:intergenic 55.0%
CAACTAACTTCCACCGGCGC+CGG + chr4_3:63666678-63666697 Msa0655200:CDS 60.0%
ACCGTCGACGGACATGAGAG+CGG - chr4_3:63666841-63666860 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + chr4_3:63669306-63669325 Msa0655200:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG - chr4_3:63669317-63669336 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + chr4_3:63669315-63669334 Msa0655200:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + chr4_3:63669316-63669335 Msa0655200:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + chr4_3:63669317-63669336 Msa0655200:intron 60.0%
ATGCACTGCACACCCCTTCC+TGG - chr4_3:63671034-63671053 None:intergenic 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG + chr4_3:63671482-63671501 Msa0655200:CDS 60.0%
AGGGCAGAGGTTATGCCTGC+AGG + chr4_3:63671963-63671982 Msa0655200:CDS 60.0%
GCCTGCAGGAAAGGCTGATG+TGG + chr4_3:63671977-63671996 Msa0655200:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG + chr4_3:63672246-63672265 Msa0655200:CDS 60.0%
AACCCCGGCAGCAACTGGTA+CGG - chr4_3:63672252-63672271 None:intergenic 60.0%
CATGCACCAGCAACCCATGG+TGG - chr4_3:63672302-63672321 None:intergenic 60.0%
GAGATCGCCGGAGTCATCGC+CGG - chr4_3:63666700-63666719 None:intergenic 65.0%
GCAAGCGGCGCATGTCATGC+CGG - chr4_3:63666802-63666821 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG + chr4_3:63666837-63666856 Msa0655200:CDS 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - chr4_3:63669312-63669331 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + chr4_3:63669314-63669333 Msa0655200:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG - chr4_3:63669318-63669337 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG + chr4_3:63669318-63669337 Msa0655200:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG + chr4_3:63669326-63669345 Msa0655200:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG + chr4_3:63669327-63669346 Msa0655200:intron 65.0%
GGCTAGCAGTGAACACCCGC+TGG + chr4_3:63670877-63670896 Msa0655200:intron 65.0%
TGCCGTACCAGTTGCTGCCG+GGG + chr4_3:63672247-63672266 Msa0655200:CDS 65.0%
GTGCAGGCGAGAGGAGCTCA+AGG - chr4_3:63672499-63672518 None:intergenic 65.0%
!! ACCGGCGCCGGCGATGACTC+CGG + chr4_3:63666690-63666709 Msa0655200:CDS 75.0%
!! GGAGTCATCGCCGGCGCCGG+TGG - chr4_3:63666691-63666710 None:intergenic 80.0%
! GCCGGAGTCATCGCCGGCGC+CGG - chr4_3:63666694-63666713 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 63666407 63672701 63666407 ID=Msa0655200;Name=Msa0655200
chr4_3 mRNA 63666407 63672701 63666407 ID=Msa0655200-mRNA-1;Parent=Msa0655200;Name=Msa0655200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=256|0.87|0.88|1|1|1|9|280|1012
chr4_3 exon 63666407 63666929 63666407 ID=Msa0655200-mRNA-1:exon:17887;Parent=Msa0655200-mRNA-1
chr4_3 exon 63667031 63667651 63667031 ID=Msa0655200-mRNA-1:exon:17888;Parent=Msa0655200-mRNA-1
chr4_3 exon 63668109 63668538 63668109 ID=Msa0655200-mRNA-1:exon:17889;Parent=Msa0655200-mRNA-1
chr4_3 exon 63668716 63669101 63668716 ID=Msa0655200-mRNA-1:exon:17890;Parent=Msa0655200-mRNA-1
chr4_3 exon 63670104 63670162 63670104 ID=Msa0655200-mRNA-1:exon:17891;Parent=Msa0655200-mRNA-1
chr4_3 exon 63670269 63670611 63670269 ID=Msa0655200-mRNA-1:exon:17892;Parent=Msa0655200-mRNA-1
chr4_3 exon 63670878 63671075 63670878 ID=Msa0655200-mRNA-1:exon:17893;Parent=Msa0655200-mRNA-1
chr4_3 exon 63671246 63671503 63671246 ID=Msa0655200-mRNA-1:exon:17894;Parent=Msa0655200-mRNA-1
chr4_3 exon 63671945 63672701 63671945 ID=Msa0655200-mRNA-1:exon:17895;Parent=Msa0655200-mRNA-1
chr4_3 five_prime_UTR 63666407 63666662 63666407 ID=Msa0655200-mRNA-1:five_prime_utr;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63666663 63666929 63666663 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63667031 63667651 63667031 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63668109 63668538 63668109 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63668716 63669101 63668716 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63670104 63670162 63670104 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63670269 63670611 63670269 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63670878 63671075 63670878 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63671246 63671503 63671246 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 CDS 63671945 63672421 63671945 ID=Msa0655200-mRNA-1:cds;Parent=Msa0655200-mRNA-1
chr4_3 three_prime_UTR 63672422 63672701 63672422 ID=Msa0655200-mRNA-1:three_prime_utr;Parent=Msa0655200-mRNA-1
Gene Sequence

>Msa0655200

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGTTTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAATTAACCGGATTCAGGTCAGAATCACCGGCATGACATGCGCCGCTTGCTCTAACTCCGTTGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTTGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTCGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAATGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>Msa0655200

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGINRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVSIVAVLLDGFYVLLLLNDSVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN*