Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1280730 | sp|Q9LE59|GAUT1_ARATH | 72.934 | 617 | 152 | 4 | 26 | 634 | 64 | 673 | 0.0 | 943 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1280730 | A0A396GIV4 | 96.985 | 597 | 11 | 1 | 45 | 634 | 16 | 612 | 0.0 | 1208 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0104860 | Msa1280730 | -0.819859 | 9.310043e-53 | -8.615850e-47 |
Msa0640880 | Msa1280730 | 0.807177 | 5.742258e-50 | -8.615850e-47 |
Msa0679270 | Msa1280730 | 0.818404 | 1.995578e-52 | -8.615850e-47 |
Msa1274740 | Msa1280730 | 0.819464 | 1.145506e-52 | -8.615850e-47 |
Msa1277600 | Msa1280730 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
Msa1280730 | Msa1312730 | 0.802524 | 5.386774e-49 | -8.615850e-47 |
Msa1280730 | Msa1313460 | 0.811176 | 7.980292e-51 | -8.615850e-47 |
Msa1280730 | Msa1320070 | 0.959608 | 1.249888e-117 | -8.615850e-47 |
Msa1280730 | Msa1324940 | 0.801517 | 8.673476e-49 | -8.615850e-47 |
Msa1280730 | Msa1367810 | 0.810914 | 9.092563e-51 | -8.615850e-47 |
Msa1280730 | Msa1394370 | -0.808367 | 3.206466e-50 | -8.615850e-47 |
Msa1280730 | Msa1430940 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
Msa0398990 | Msa1280730 | 0.800989 | 1.112419e-48 | -8.615850e-47 |
Msa0450860 | Msa1280730 | 0.805702 | 1.175078e-49 | -8.615850e-47 |
Msa0450880 | Msa1280730 | 0.803716 | 3.053122e-49 | -8.615850e-47 |
Msa1022310 | Msa1280730 | 0.813779 | 2.153520e-51 | -8.615850e-47 |
Msa1056520 | Msa1280730 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
Msa1075120 | Msa1280730 | 0.813433 | 2.565592e-51 | -8.615850e-47 |
Msa0247310 | Msa1280730 | 0.804375 | 2.226447e-49 | -8.615850e-47 |
Msa0253410 | Msa1280730 | 0.813415 | 2.590006e-51 | -8.615850e-47 |
Msa0303780 | Msa1280730 | 0.809858 | 1.537231e-50 | -8.615850e-47 |
Msa0307750 | Msa1280730 | 0.801380 | 9.254274e-49 | -8.615850e-47 |
Msa0544780 | Msa1280730 | 0.834992 | 2.174745e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1280730 | MtrunA17_Chr8g0351091 | 96.985 | 597 | 11 | 1 | 45 | 634 | 16 | 612 | 0.0 | 1208 |
Msa1280730 | MtrunA17_Chr7g0246371 | 82.667 | 600 | 94 | 3 | 42 | 634 | 68 | 664 | 0.0 | 1015 |
Msa1280730 | MtrunA17_Chr3g0138381 | 54.079 | 662 | 239 | 7 | 5 | 632 | 33 | 663 | 0.0 | 709 |
Msa1280730 | MtrunA17_Chr2g0290961 | 53.504 | 585 | 252 | 6 | 60 | 633 | 91 | 666 | 0.0 | 627 |
Msa1280730 | MtrunA17_Chr8g0383241 | 56.405 | 484 | 194 | 3 | 161 | 634 | 15 | 491 | 0.0 | 577 |
Msa1280730 | MtrunA17_Chr2g0283461 | 48.085 | 470 | 224 | 6 | 178 | 633 | 70 | 533 | 3.58e-163 | 478 |
Msa1280730 | MtrunA17_Chr7g0235161 | 56.934 | 411 | 171 | 4 | 225 | 632 | 151 | 558 | 6.88e-158 | 465 |
Msa1280730 | MtrunA17_Chr4g0061711 | 47.007 | 451 | 223 | 4 | 190 | 632 | 92 | 534 | 1.63e-150 | 445 |
Msa1280730 | MtrunA17_Chr2g0308241 | 46.652 | 448 | 229 | 4 | 190 | 632 | 92 | 534 | 4.73e-149 | 442 |
Msa1280730 | MtrunA17_Chr6g0456071 | 50.952 | 420 | 199 | 5 | 218 | 632 | 136 | 553 | 2.86e-146 | 435 |
Msa1280730 | MtrunA17_Chr7g0260711 | 44.946 | 465 | 219 | 4 | 179 | 633 | 216 | 653 | 7.54e-144 | 432 |
Msa1280730 | MtrunA17_Chr2g0277591 | 43.312 | 471 | 221 | 8 | 178 | 633 | 70 | 509 | 9.52e-134 | 401 |
Msa1280730 | MtrunA17_Chr1g0184751 | 43.432 | 472 | 224 | 8 | 172 | 632 | 158 | 597 | 1.12e-132 | 402 |
Msa1280730 | MtrunA17_Chr7g0218571 | 41.845 | 466 | 235 | 10 | 191 | 634 | 86 | 537 | 1.92e-123 | 376 |
Msa1280730 | MtrunA17_Chr2g0319311 | 40.865 | 416 | 229 | 5 | 234 | 632 | 124 | 539 | 8.91e-113 | 348 |
Msa1280730 | MtrunA17_Chr6g0454101 | 43.780 | 418 | 216 | 7 | 235 | 634 | 116 | 532 | 8.60e-110 | 340 |
Msa1280730 | MtrunA17_Chr4g0076011 | 39.130 | 414 | 226 | 5 | 245 | 632 | 58 | 471 | 1.66e-104 | 325 |
Msa1280730 | MtrunA17_Chr3g0097091 | 38.500 | 400 | 224 | 7 | 249 | 632 | 135 | 528 | 1.30e-93 | 298 |
Msa1280730 | MtrunA17_Chr7g0245621 | 31.546 | 485 | 293 | 7 | 165 | 633 | 183 | 644 | 3.01e-74 | 250 |
Msa1280730 | MtrunA17_Chr4g0076331 | 57.000 | 200 | 56 | 3 | 437 | 633 | 1 | 173 | 5.14e-68 | 219 |
Msa1280730 | MtrunA17_Chr6g0451981 | 26.627 | 338 | 199 | 12 | 309 | 627 | 64 | 371 | 5.50e-24 | 104 |
Msa1280730 | MtrunA17_Chr7g0259321 | 32.000 | 175 | 114 | 4 | 438 | 607 | 151 | 325 | 8.29e-22 | 97.4 |
Msa1280730 | MtrunA17_Chr5g0414981 | 27.928 | 333 | 190 | 15 | 305 | 622 | 76 | 373 | 3.23e-21 | 97.1 |
Msa1280730 | MtrunA17_Chr4g0066331 | 27.413 | 259 | 157 | 8 | 380 | 607 | 62 | 320 | 5.01e-21 | 95.1 |
Msa1280730 | MtrunA17_Chr3g0127611 | 30.612 | 196 | 128 | 5 | 438 | 625 | 140 | 335 | 5.83e-21 | 94.7 |
Msa1280730 | MtrunA17_Chr7g0269751 | 27.358 | 318 | 181 | 11 | 319 | 624 | 74 | 353 | 6.95e-21 | 94.7 |
Msa1280730 | MtrunA17_Chr3g0141321 | 28.497 | 193 | 125 | 6 | 438 | 619 | 139 | 329 | 3.47e-19 | 89.4 |
Msa1280730 | MtrunA17_Chr8g0373671 | 27.751 | 209 | 134 | 6 | 406 | 604 | 115 | 316 | 4.59e-18 | 86.3 |
Msa1280730 | MtrunA17_Chr1g0154521 | 28.866 | 194 | 124 | 6 | 438 | 619 | 165 | 356 | 4.06e-17 | 83.6 |
Msa1280730 | MtrunA17_Chr1g0196511 | 31.429 | 175 | 115 | 3 | 438 | 607 | 154 | 328 | 2.20e-16 | 81.3 |
Msa1280730 | MtrunA17_Chr5g0403501 | 29.480 | 173 | 116 | 4 | 438 | 604 | 166 | 338 | 8.34e-16 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1280730 | AT3G61130.1 | 72.934 | 617 | 152 | 4 | 26 | 634 | 64 | 673 | 0.0 | 943 |
Msa1280730 | AT4G38270.2 | 54.560 | 614 | 247 | 6 | 48 | 634 | 68 | 676 | 0.0 | 703 |
Msa1280730 | AT4G38270.1 | 54.207 | 618 | 247 | 6 | 48 | 634 | 68 | 680 | 0.0 | 699 |
Msa1280730 | AT2G46480.3 | 58.868 | 530 | 206 | 4 | 113 | 634 | 15 | 540 | 0.0 | 648 |
Msa1280730 | AT2G46480.4 | 58.868 | 530 | 206 | 4 | 113 | 634 | 28 | 553 | 0.0 | 647 |
Msa1280730 | AT5G47780.1 | 61.822 | 461 | 165 | 2 | 180 | 633 | 159 | 615 | 0.0 | 622 |
Msa1280730 | AT2G46480.2 | 55.472 | 530 | 199 | 5 | 113 | 634 | 15 | 515 | 0.0 | 593 |
Msa1280730 | AT2G46480.1 | 55.472 | 530 | 199 | 5 | 113 | 634 | 28 | 528 | 0.0 | 593 |
Msa1280730 | AT3G25140.1 | 56.161 | 422 | 176 | 5 | 217 | 632 | 139 | 557 | 5.42e-170 | 496 |
Msa1280730 | AT1G18580.1 | 48.330 | 449 | 218 | 5 | 190 | 630 | 92 | 534 | 1.26e-156 | 461 |
Msa1280730 | AT2G20810.1 | 48.230 | 452 | 221 | 6 | 190 | 633 | 90 | 536 | 7.51e-149 | 441 |
Msa1280730 | AT3G02350.1 | 51.716 | 437 | 203 | 5 | 202 | 632 | 125 | 559 | 9.35e-149 | 442 |
Msa1280730 | AT1G06780.1 | 43.656 | 465 | 227 | 3 | 179 | 633 | 149 | 588 | 1.53e-136 | 412 |
Msa1280730 | AT1G06780.2 | 43.656 | 465 | 227 | 3 | 179 | 633 | 162 | 601 | 2.54e-136 | 412 |
Msa1280730 | AT2G30575.1 | 43.133 | 466 | 229 | 4 | 179 | 634 | 171 | 610 | 1.29e-135 | 410 |
Msa1280730 | AT3G01040.2 | 44.498 | 418 | 215 | 5 | 234 | 634 | 115 | 532 | 3.70e-118 | 362 |
Msa1280730 | AT3G01040.3 | 44.498 | 418 | 215 | 5 | 234 | 634 | 115 | 532 | 3.70e-118 | 362 |
Msa1280730 | AT5G15470.1 | 45.084 | 417 | 212 | 5 | 235 | 634 | 116 | 532 | 1.56e-117 | 361 |
Msa1280730 | AT5G54690.1 | 39.019 | 428 | 237 | 6 | 229 | 632 | 105 | 532 | 2.47e-110 | 342 |
Msa1280730 | AT3G01040.1 | 41.627 | 418 | 194 | 6 | 234 | 634 | 115 | 499 | 7.90e-103 | 322 |
Msa1280730 | AT3G58790.2 | 37.931 | 406 | 224 | 8 | 249 | 632 | 7 | 406 | 5.95e-89 | 283 |
Msa1280730 | AT3G58790.1 | 36.385 | 426 | 243 | 8 | 229 | 632 | 119 | 538 | 9.68e-88 | 283 |
Msa1280730 | AT2G38650.2 | 33.747 | 483 | 280 | 9 | 165 | 633 | 162 | 618 | 4.24e-86 | 281 |
Msa1280730 | AT2G38650.1 | 33.747 | 483 | 280 | 9 | 165 | 633 | 162 | 618 | 4.24e-86 | 281 |
Msa1280730 | AT2G38650.3 | 34.190 | 389 | 217 | 8 | 165 | 540 | 162 | 524 | 3.03e-64 | 221 |
Msa1280730 | AT1G02720.1 | 27.900 | 319 | 185 | 11 | 319 | 626 | 77 | 361 | 2.47e-22 | 99.8 |
Msa1280730 | AT1G02720.2 | 27.900 | 319 | 185 | 11 | 319 | 626 | 77 | 361 | 2.47e-22 | 99.8 |
Msa1280730 | AT3G06260.1 | 30.857 | 175 | 116 | 3 | 438 | 607 | 150 | 324 | 7.50e-22 | 97.8 |
Msa1280730 | AT4G02130.3 | 26.543 | 324 | 193 | 10 | 314 | 626 | 57 | 346 | 9.69e-22 | 97.4 |
Msa1280730 | AT4G02130.1 | 26.543 | 324 | 193 | 10 | 314 | 626 | 57 | 346 | 9.69e-22 | 97.4 |
Msa1280730 | AT4G02130.2 | 26.543 | 324 | 193 | 10 | 314 | 626 | 57 | 346 | 9.69e-22 | 97.4 |
Msa1280730 | AT3G62660.1 | 26.498 | 317 | 185 | 10 | 319 | 624 | 79 | 358 | 1.18e-21 | 97.4 |
Msa1280730 | AT1G70090.1 | 25.552 | 317 | 195 | 10 | 319 | 624 | 78 | 364 | 3.16e-21 | 96.7 |
Msa1280730 | AT1G70090.2 | 25.552 | 317 | 195 | 10 | 319 | 624 | 78 | 364 | 3.16e-21 | 96.7 |
Msa1280730 | AT3G28340.1 | 29.536 | 237 | 150 | 9 | 404 | 628 | 126 | 357 | 1.46e-20 | 94.4 |
Msa1280730 | AT1G19300.1 | 30.857 | 175 | 111 | 5 | 438 | 604 | 150 | 322 | 8.02e-19 | 89.0 |
Msa1280730 | AT1G24170.1 | 23.975 | 317 | 200 | 9 | 319 | 624 | 81 | 367 | 2.63e-18 | 87.8 |
Msa1280730 | AT3G50760.1 | 26.633 | 199 | 133 | 5 | 436 | 623 | 134 | 330 | 7.21e-16 | 79.7 |
Msa1280730 | AT1G13250.1 | 25.926 | 324 | 197 | 11 | 314 | 627 | 51 | 341 | 1.95e-15 | 78.6 |
Find 151 sgRNAs with CRISPR-Local
Find 561 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCCATTTCTTTCATCTTTC+TGG | -0.058023 | 8_3:-19452588 | Msa1280730:three_prime_UTR |
GTTACTGATAAACTCAATTT+TGG | 0.156608 | 8_3:-19453565 | Msa1280730:CDS |
TTGAGCATCGAGAGATATTT+TGG | 0.169108 | 8_3:+19453340 | None:intergenic |
GCATTGACTCTGTTCCTTCT+AGG | 0.177965 | 8_3:+19452517 | None:intergenic |
CCAGGACTAATGACATTCTA+TGG | 0.236359 | 8_3:-19452857 | Msa1280730:CDS |
AGAAGGATTTGACAGGATTA+TGG | 0.240515 | 8_3:-19453240 | Msa1280730:CDS |
TGTATCCAGCACAGATGATA+TGG | 0.277199 | 8_3:-19455720 | Msa1280730:CDS |
CGATGTCATCATCAAGAAAA+AGG | 0.314739 | 8_3:+19453269 | None:intergenic |
TGACAAAGTATCGGCCTTAC+TGG | 0.316170 | 8_3:-19452700 | Msa1280730:CDS |
TCGTGGCATGTCCTTGGTTT+GGG | 0.323379 | 8_3:-19452812 | Msa1280730:CDS |
TCTAATTTAGGATAAACTTC+TGG | 0.323521 | 8_3:+19453298 | None:intergenic |
ATATCACAAATGGCAAAATA+TGG | 0.336591 | 8_3:-19453026 | Msa1280730:intron |
ATTATGGGAAGTTGATCTTC+AGG | 0.339063 | 8_3:-19453224 | Msa1280730:CDS |
ATCGTGGCATGTCCTTGGTT+TGG | 0.342505 | 8_3:-19452813 | Msa1280730:CDS |
GATCTTCAGGGGAAAGTAAA+TGG | 0.342595 | 8_3:-19453211 | Msa1280730:CDS |
TTCTTAACCTTGTTTCAAAT+AGG | 0.344791 | 8_3:+19452412 | None:intergenic |
TTCAGCACTGCCTTCTTCTC+AGG | 0.351349 | 8_3:+19458740 | None:intergenic |
ATCTGTTGAGTCAGCCGTAC+TGG | 0.356409 | 8_3:-19454458 | Msa1280730:CDS |
ATTCTTCTGTTCGGTTTATG+AGG | 0.374399 | 8_3:-19454390 | Msa1280730:CDS |
GTGAAGGAAGGAAGATCTTC+AGG | 0.374727 | 8_3:-19455450 | Msa1280730:intron |
TATGAGGGACCAGATCATTA+TGG | 0.376231 | 8_3:-19454374 | Msa1280730:CDS |
GAAGGATTTGACAGGATTAT+GGG | 0.385355 | 8_3:-19453239 | Msa1280730:CDS |
TCTTGTGTAACATGTGTTGT+TGG | 0.388574 | 8_3:+19455483 | None:intergenic |
AATGAAAGAGTATTATTTCA+AGG | 0.389390 | 8_3:-19453416 | Msa1280730:CDS |
TACTGGGTAAATACAGCATT+TGG | 0.389876 | 8_3:-19454441 | Msa1280730:CDS |
GACAGGGTGCTTTGGAAGCT+GGG | 0.390513 | 8_3:-19452890 | Msa1280730:CDS |
CCCGTGCCTTTGACAGAACT+TGG | 0.391358 | 8_3:+19454113 | None:intergenic |
TAGTACACGTCAAGAAATAA+AGG | 0.392316 | 8_3:-19454143 | Msa1280730:CDS |
AGACAGCTGATGAGAAAGTT+AGG | 0.401919 | 8_3:-19454039 | Msa1280730:CDS |
ACATGCCACGATTTATTTAG+TGG | 0.403063 | 8_3:+19452824 | None:intergenic |
GATTCAAGCTGCCGCAATAC+AGG | 0.410074 | 8_3:+19453445 | None:intergenic |
AATGCTTGTGGTTGGGCATA+TGG | 0.411331 | 8_3:-19453100 | Msa1280730:CDS |
TCAAAGTTTCTTGCAATATG+TGG | 0.412409 | 8_3:+19453127 | None:intergenic |
TATGCCCAACCACAAGCATT+TGG | 0.412414 | 8_3:+19453103 | None:intergenic |
AGTTAAGATATTTGTCAAAT+CGG | 0.415942 | 8_3:+19453158 | None:intergenic |
GTTCCCTAGGAGTGAGAACT+TGG | 0.416886 | 8_3:-19453894 | Msa1280730:CDS |
TGCCAGAAAGATGAAAGAAA+TGG | 0.425310 | 8_3:+19452586 | None:intergenic |
GCCAGAAAGATGAAAGAAAT+GGG | 0.426450 | 8_3:+19452587 | None:intergenic |
GTGCAGAGGGTCTTACTCAC+TGG | 0.437169 | 8_3:-19455359 | Msa1280730:intron |
AGACAGGGTGCTTTGGAAGC+TGG | 0.437302 | 8_3:-19452891 | Msa1280730:CDS |
CAAAAGAAACCACATGTTCA+TGG | 0.440335 | 8_3:+19453540 | None:intergenic |
AATTCCACTTGGTATGGTCT+TGG | 0.447689 | 8_3:+19453976 | None:intergenic |
TGGGTTTCTATATTTCATAT+TGG | 0.450004 | 8_3:+19453360 | None:intergenic |
GCGAAGGAAACCCCTCGCTT+TGG | 0.450681 | 8_3:+19460053 | None:intergenic |
TGGTCAGTCTTGAACCTAGA+AGG | 0.460339 | 8_3:-19452531 | Msa1280730:three_prime_UTR |
AGATGGAAAACATGCTTTGA+AGG | 0.460806 | 8_3:+19453589 | None:intergenic |
GACTTCAAATGCTGCCTATG+AGG | 0.462603 | 8_3:-19455633 | Msa1280730:intron |
AAAATGCTGATTCTTCTGTT+CGG | 0.464420 | 8_3:-19454399 | Msa1280730:CDS |
TTAACATATTTAGTCCAGTA+AGG | 0.464878 | 8_3:+19452686 | None:intergenic |
AAGGAAACCCCTCGCTTTGG+CGG | 0.468661 | 8_3:+19460056 | None:intergenic |
TAACTTGCATTTCTGCAGAT+AGG | 0.469528 | 8_3:+19452652 | None:intergenic |
CCAAGTTCTGTCAAAGGCAC+GGG | 0.472286 | 8_3:-19454113 | Msa1280730:CDS |
AATAAATCGTGGCATGTCCT+TGG | 0.472321 | 8_3:-19452818 | Msa1280730:CDS |
AAAGAGTATTATTTCAAGGC+AGG | 0.473099 | 8_3:-19453412 | Msa1280730:CDS |
AGAATGAAGACAGGGTGCTT+TGG | 0.476034 | 8_3:-19452898 | Msa1280730:CDS |
TGAGTTTATCAGTAACAAGA+TGG | 0.477741 | 8_3:+19453572 | None:intergenic |
ACGTCAAGAAATAAAGGCTA+TGG | 0.478191 | 8_3:-19454137 | Msa1280730:CDS |
CTAAAATTGTCAAGACTCAA+AGG | 0.478518 | 8_3:+19455695 | None:intergenic |
CACATTAGTCCAAACCTCAT+AGG | 0.483893 | 8_3:+19455619 | None:intergenic |
TGCTGCTGAGTTGGTAAAGA+TGG | 0.489018 | 8_3:-19454530 | Msa1280730:CDS |
TGATCCAAATGCTTGTGGTT+GGG | 0.490330 | 8_3:-19453107 | Msa1280730:CDS |
TGTTGCAAGAGCTGCAGTCT+AGG | 0.490652 | 8_3:-19454306 | Msa1280730:CDS |
CTGATTCAGATCTTCATCAC+AGG | 0.491823 | 8_3:-19454246 | Msa1280730:intron |
TATTGGAAGCACTAGAAGAA+AGG | 0.491924 | 8_3:+19453377 | None:intergenic |
GCACTAGAAGAAAGGGTGGT+TGG | 0.493295 | 8_3:+19453385 | None:intergenic |
TAGTGCATAATGATAAAGAC+TGG | 0.499652 | 8_3:+19453865 | None:intergenic |
AGGCCCCATATCATCTGTGC+TGG | 0.501711 | 8_3:+19455715 | None:intergenic |
TCTGCGTCATGGAGAGTTGT+TGG | 0.501808 | 8_3:-19455662 | Msa1280730:CDS |
CCCTTCGGACTTGTCGTGTA+GGG | 0.504060 | 8_3:+19455328 | None:intergenic |
TATGACAGCAAGTTGGTCAC+TGG | 0.506011 | 8_3:-19454082 | Msa1280730:CDS |
ATTGGAAGCACTAGAAGAAA+GGG | 0.507070 | 8_3:+19453378 | None:intergenic |
ATACCCTAGCCATAATGATC+TGG | 0.507931 | 8_3:+19454365 | None:intergenic |
TTCTCCAAGTTCTCACTCCT+AGG | 0.508939 | 8_3:+19453890 | None:intergenic |
CAGAATGCATCCTGAGAAGA+AGG | 0.509628 | 8_3:-19458750 | Msa1280730:CDS |
TTATGGGAAGTTGATCTTCA+GGG | 0.517146 | 8_3:-19453223 | Msa1280730:CDS |
GTATCCAGCACAGATGATAT+GGG | 0.517429 | 8_3:-19455719 | Msa1280730:CDS |
AAAGAGAGTCAACATGCGTT+AGG | 0.517750 | 8_3:-19454280 | Msa1280730:CDS |
TTCTTCTGTTCGGTTTATGA+GGG | 0.518856 | 8_3:-19454389 | Msa1280730:CDS |
TGATGACATCGTTGTTCAGA+AGG | 0.518905 | 8_3:-19453257 | Msa1280730:CDS |
ACGCAATGCCGCCAAAGCGA+GGG | 0.519731 | 8_3:-19460064 | Msa1280730:CDS |
GTTGTTCAGAAGGATTTGAC+AGG | 0.522397 | 8_3:-19453247 | Msa1280730:CDS |
TCACTGGCATATATCACAAA+TGG | 0.525538 | 8_3:-19453036 | Msa1280730:CDS |
GCAATGAATTCCACTTGGTA+TGG | 0.527610 | 8_3:+19453970 | None:intergenic |
GGAAAAGCGTGCTGCTGAGT+TGG | 0.528593 | 8_3:-19454539 | Msa1280730:CDS |
CCATAGAATGTCATTAGTCC+TGG | 0.529892 | 8_3:+19452857 | None:intergenic |
ATCATTGATCGATCTACAGT+TGG | 0.532779 | 8_3:+19452782 | None:intergenic |
TTGATCCAAATGCTTGTGGT+TGG | 0.535817 | 8_3:-19453108 | Msa1280730:CDS |
TTCTGATCTGATGTTCAGAC+AGG | 0.545504 | 8_3:-19452348 | Msa1280730:three_prime_UTR |
CATGAACGTATTTGATCTCA+AGG | 0.549062 | 8_3:-19453077 | Msa1280730:CDS |
TAGAAGAAAGGGTGGTTGGA+TGG | 0.549689 | 8_3:+19453389 | None:intergenic |
GCCAAGTTCTGTCAAAGGCA+CGG | 0.552166 | 8_3:-19454114 | Msa1280730:CDS |
TCTGTTGAGTCAGCCGTACT+GGG | 0.556493 | 8_3:-19454457 | Msa1280730:CDS |
CTAGTGTCTTGCTAGAATGA+TGG | 0.558306 | 8_3:-19452551 | Msa1280730:three_prime_UTR |
CTGCCGCAATACAGGGCAGT+AGG | 0.560064 | 8_3:+19453453 | None:intergenic |
CATCCTACTGCCCTGTATTG+CGG | 0.562221 | 8_3:-19453456 | Msa1280730:CDS |
AACTTTGATCCAAATGCTTG+TGG | 0.562703 | 8_3:-19453112 | Msa1280730:CDS |
ACCCTTCGGACTTGTCGTGT+AGG | 0.562800 | 8_3:+19455327 | None:intergenic |
GGACCAGATCATTATGGCTA+GGG | 0.565156 | 8_3:-19454368 | Msa1280730:intron |
CAGGACTAATGACATTCTAT+GGG | 0.566407 | 8_3:-19452856 | Msa1280730:CDS |
GGGGTTTCCTTCGCTAAGAA+CGG | 0.566743 | 8_3:-19460044 | Msa1280730:CDS |
GGGACCAGATCATTATGGCT+AGG | 0.569661 | 8_3:-19454369 | Msa1280730:CDS |
CAAGTTCTGTCAAAGGCACG+GGG | 0.571586 | 8_3:-19454112 | Msa1280730:CDS |
TACGCAATGCCGCCAAAGCG+AGG | 0.572776 | 8_3:-19460065 | Msa1280730:CDS |
TTCGCTAAGAACGGAAGCAA+AGG | 0.572869 | 8_3:-19460035 | Msa1280730:CDS |
CTGGAAGATAGAATCTAAGA+TGG | 0.575970 | 8_3:+19453317 | None:intergenic |
AATGTGGAAAGGAATGATGT+TGG | 0.577511 | 8_3:+19452477 | None:intergenic |
CGCAATGCCGCCAAAGCGAG+GGG | 0.577937 | 8_3:-19460063 | Msa1280730:CDS |
TGGGTAAATACAGCATTTGG+AGG | 0.579641 | 8_3:-19454438 | Msa1280730:CDS |
GCTGAAGAGATTTGAATCTG+AGG | 0.580674 | 8_3:-19458723 | Msa1280730:intron |
ATGCAAGTTACATGAATAGA+CGG | 0.582875 | 8_3:-19452639 | Msa1280730:exon |
TTTGCTTCCGTTCTTAGCGA+AGG | 0.586731 | 8_3:+19460037 | None:intergenic |
AATGCTGTATTTACCCAGTA+CGG | 0.587071 | 8_3:+19454444 | None:intergenic |
GACTCATATCAGTAAAATCA+CGG | 0.588030 | 8_3:-19452229 | Msa1280730:three_prime_UTR |
CGTCAAGAAATAAAGGCTAT+GGG | 0.590218 | 8_3:-19454136 | Msa1280730:CDS |
AAGCACATTCCTCAGTCAGT+TGG | 0.593627 | 8_3:-19454002 | Msa1280730:CDS |
TATGGGAAGTTGATCTTCAG+GGG | 0.594151 | 8_3:-19453222 | Msa1280730:CDS |
CTCAGCTGTTACAAATGCAA+AGG | 0.595673 | 8_3:-19453804 | Msa1280730:intron |
AAGCAAGAATCAATGTGGAA+AGG | 0.599134 | 8_3:+19452466 | None:intergenic |
ATTCAAGCTGCCGCAATACA+GGG | 0.605492 | 8_3:+19453446 | None:intergenic |
CGATTGCCATGACAAAGTAT+CGG | 0.606224 | 8_3:-19452709 | Msa1280730:CDS |
TCTCCAAGTTCTCACTCCTA+GGG | 0.606744 | 8_3:+19453891 | None:intergenic |
GCCCTACACGACAAGTCCGA+AGG | 0.608010 | 8_3:-19455329 | Msa1280730:CDS |
GATCAGAATATTGTACAATG+AGG | 0.611184 | 8_3:+19452363 | None:intergenic |
ATTCTCACCTATTTGAAACA+AGG | 0.613661 | 8_3:-19452419 | Msa1280730:three_prime_UTR |
AAGCTGGGGACATTACCTCC+AGG | 0.613770 | 8_3:-19452875 | Msa1280730:CDS |
GTCATGGCAATCGCTAGCCA+CGG | 0.617762 | 8_3:+19452719 | None:intergenic |
TATGGGCCAAGTTCTGTCAA+AGG | 0.623145 | 8_3:-19454119 | Msa1280730:CDS |
CCAGAAAGATGAAAGAAATG+GGG | 0.626206 | 8_3:+19452588 | None:intergenic |
ACAGGGTGCTTTGGAAGCTG+GGG | 0.627413 | 8_3:-19452889 | Msa1280730:CDS |
GCAATTGTATGACAGCAAGT+TGG | 0.629238 | 8_3:-19454089 | Msa1280730:CDS |
TCTTGGCAGCCAACTGACTG+AGG | 0.635206 | 8_3:+19453993 | None:intergenic |
CCCTACACGACAAGTCCGAA+GGG | 0.638020 | 8_3:-19455328 | Msa1280730:intron |
CACATCCACTAAATAAATCG+TGG | 0.639212 | 8_3:-19452829 | Msa1280730:CDS |
ACGTATTTGATCTCAAGGAG+TGG | 0.640381 | 8_3:-19453072 | Msa1280730:CDS |
GATAAGCAATGAATTCCACT+TGG | 0.641239 | 8_3:+19453965 | None:intergenic |
GTGGAAAGGAATGATGTTGG+AGG | 0.644209 | 8_3:+19452480 | None:intergenic |
AGTGCATAATGATAAAGACT+GGG | 0.649951 | 8_3:+19453866 | None:intergenic |
GCAGCAGTTGTACATTACAA+TGG | 0.655408 | 8_3:-19452752 | Msa1280730:CDS |
GTAAGGCCGATACTTTGTCA+TGG | 0.657953 | 8_3:+19452703 | None:intergenic |
TAGAATGTCATTAGTCCTGG+AGG | 0.659704 | 8_3:+19452860 | None:intergenic |
GGAGGTAGTAATCTATTGTG+AGG | 0.664103 | 8_3:+19453936 | None:intergenic |
ATTCAAAGCAAGAATCAATG+TGG | 0.665211 | 8_3:+19452461 | None:intergenic |
TATCCAGCACAGATGATATG+GGG | 0.668316 | 8_3:-19455718 | Msa1280730:CDS |
CAGAAAGATGAAAGAAATGG+GGG | 0.671244 | 8_3:+19452589 | None:intergenic |
GGAAGCACTAGAAGAAAGGG+TGG | 0.674642 | 8_3:+19453381 | None:intergenic |
AACAGCTGAGTTCACAACAA+CGG | 0.690951 | 8_3:+19453817 | None:intergenic |
ACAATGGTAATATGAAGCCG+TGG | 0.696694 | 8_3:-19452736 | Msa1280730:CDS |
TTGGACTATAACCCAAACCA+AGG | 0.706567 | 8_3:+19452801 | None:intergenic |
GCTGCCAAGACCATACCAAG+TGG | 0.721158 | 8_3:-19453980 | Msa1280730:CDS |
AATGGTGCAGTTGAAACATG+TGG | 0.724609 | 8_3:-19453193 | Msa1280730:CDS |
AAGTTCTGTCAAAGGCACGG+GGG | 0.753594 | 8_3:-19454111 | Msa1280730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATATTGTCAAATTTA+AGG | + | chr8_3:19455190-19455209 | None:intergenic | 10.0% |
!!! | TTTATACTTATTTTAAATAC+AGG | + | chr8_3:19456731-19456750 | None:intergenic | 10.0% |
!!! | TTTAAATTTTCTAAGATTTA+AGG | + | chr8_3:19457363-19457382 | None:intergenic | 10.0% |
!!! | AGGATAATCTTTAAAAATTA+AGG | + | chr8_3:19455170-19455189 | None:intergenic | 15.0% |
!!! | ATGGTTGATTTTTTAATTAA+AGG | - | chr8_3:19456788-19456807 | Msa1280730:intron | 15.0% |
!!! | ATATTTTCTCAAATCATATA+TGG | + | chr8_3:19458636-19458655 | None:intergenic | 15.0% |
!!! | AAAAGGATTTTATCTAATTT+AGG | + | chr8_3:19459019-19459038 | None:intergenic | 15.0% |
!! | TATTTAATTGTTGCTGTATT+GGG | - | chr8_3:19452665-19452684 | Msa1280730:CDS | 20.0% |
!! | TACAAACTATTGTCAAATAA+CGG | + | chr8_3:19452810-19452829 | None:intergenic | 20.0% |
!! | AAAGACAAGAAACAATATTT+GGG | - | chr8_3:19453697-19453716 | Msa1280730:intron | 20.0% |
!! | GTCAATAATTAGAAAACATA+AGG | - | chr8_3:19453793-19453812 | Msa1280730:intron | 20.0% |
!! | CATAAGTTTCACAATAATTT+GGG | + | chr8_3:19454462-19454481 | None:intergenic | 20.0% |
!! | ACATAAGTTTCACAATAATT+TGG | + | chr8_3:19454463-19454482 | None:intergenic | 20.0% |
!! | TTGTTGAATGACAATTAATT+TGG | - | chr8_3:19454593-19454612 | Msa1280730:intron | 20.0% |
!! | AATTGAAGTCTTAAGAAAAA+AGG | - | chr8_3:19454849-19454868 | Msa1280730:intron | 20.0% |
!! | GAAGTAAATCAAAGTATATA+TGG | + | chr8_3:19455112-19455131 | None:intergenic | 20.0% |
!! | CTAATTAAACAAAAGTCATT+TGG | - | chr8_3:19455131-19455150 | Msa1280730:intron | 20.0% |
!!! | AACAACATAAGTTGATATTA+CGG | + | chr8_3:19455483-19455502 | None:intergenic | 20.0% |
!!! | GTATATTTATTAGTTTAAGC+CGG | - | chr8_3:19456239-19456258 | Msa1280730:intron | 20.0% |
!!! | TTTATTTTTGACATCAACAA+AGG | - | chr8_3:19457101-19457120 | Msa1280730:intron | 20.0% |
!! | AATTGTAAAATCAAATAGTG+AGG | + | chr8_3:19457204-19457223 | None:intergenic | 20.0% |
!! | AAATATTTCAGAAAGTAAAC+AGG | - | chr8_3:19457388-19457407 | Msa1280730:intron | 20.0% |
!! | AATTATTCACTGTCTATAAA+AGG | + | chr8_3:19458572-19458591 | None:intergenic | 20.0% |
!!! | AAAATGTAGATGATTTTAAG+TGG | - | chr8_3:19458816-19458835 | Msa1280730:intron | 20.0% |
!!! | AATGAAAGAGTATTATTTCA+AGG | - | chr8_3:19458886-19458905 | Msa1280730:intron | 20.0% |
!! | AGTTAAGATATTTGTCAAAT+CGG | + | chr8_3:19459147-19459166 | None:intergenic | 20.0% |
!! | AAATCAGATTAAAAAAAGCT+AGG | + | chr8_3:19459383-19459402 | None:intergenic | 20.0% |
!!! | TTCATTACTTTTTTCTCACA+TGG | - | chr8_3:19452381-19452400 | Msa1280730:three_prime_UTR | 25.0% |
! | AATGTAATAAATGTAGTGTC+TGG | - | chr8_3:19452467-19452486 | Msa1280730:three_prime_UTR | 25.0% |
!! | GGTATACTTTTGTATTAGAA+GGG | - | chr8_3:19452605-19452624 | Msa1280730:three_prime_UTR | 25.0% |
! | GTATTTAATTGTTGCTGTAT+TGG | - | chr8_3:19452664-19452683 | Msa1280730:CDS | 25.0% |
!!! | GTTTTAGATAGTATTGATAG+TGG | - | chr8_3:19452959-19452978 | Msa1280730:intron | 25.0% |
!! | TCGTAAAATGAAAGTGTATT+AGG | + | chr8_3:19453050-19453069 | None:intergenic | 25.0% |
!! | ATTTTACGATCCATATAATG+CGG | - | chr8_3:19453061-19453080 | Msa1280730:CDS | 25.0% |
! | TTTCCATACTACATCAATTT+CGG | + | chr8_3:19453091-19453110 | None:intergenic | 25.0% |
! | AACTAAGAAATTACCTTTCA+AGG | + | chr8_3:19453139-19453158 | None:intergenic | 25.0% |
! | GGATTAAATGATAGAAGAAA+TGG | + | chr8_3:19453325-19453344 | None:intergenic | 25.0% |
! | GAAAGACAAGAAACAATATT+TGG | - | chr8_3:19453696-19453715 | Msa1280730:intron | 25.0% |
!! | ATATTGTGTTTTCACTTCTT+GGG | + | chr8_3:19453751-19453770 | None:intergenic | 25.0% |
!! | AATATTGTGTTTTCACTTCT+TGG | + | chr8_3:19453752-19453771 | None:intergenic | 25.0% |
! | AATATGAGTTAGAAAGACTA+CGG | - | chr8_3:19453894-19453913 | Msa1280730:CDS | 25.0% |
!!! | AAGCCCAATTATATTTTTTG+TGG | - | chr8_3:19454025-19454044 | Msa1280730:CDS | 25.0% |
!!! | AGCCCAATTATATTTTTTGT+GGG | - | chr8_3:19454026-19454045 | Msa1280730:CDS | 25.0% |
! | TTTGGAGACTTATTCAAAAA+TGG | - | chr8_3:19454195-19454214 | Msa1280730:intron | 25.0% |
! | TAATAAGATCCTTCTTTGTT+AGG | - | chr8_3:19454489-19454508 | Msa1280730:CDS | 25.0% |
!! | ATTTTTCATGCAACAACTAT+GGG | + | chr8_3:19454515-19454534 | None:intergenic | 25.0% |
!! | TATTTTTCATGCAACAACTA+TGG | + | chr8_3:19454516-19454535 | None:intergenic | 25.0% |
!! | CTTCAATTTGAAAGTTTTTG+TGG | + | chr8_3:19454837-19454856 | None:intergenic | 25.0% |
! | GTAAATCAAAGTATATATGG+TGG | + | chr8_3:19455109-19455128 | None:intergenic | 25.0% |
! | TGATGTATTATGAAAACTTG+TGG | - | chr8_3:19455232-19455251 | Msa1280730:intron | 25.0% |
!!! | AAATTTTGTTGTTGCTTGTT+GGG | - | chr8_3:19455367-19455386 | Msa1280730:intron | 25.0% |
! | GTTGAAGTTATGAAATGAAA+TGG | - | chr8_3:19455920-19455939 | Msa1280730:intron | 25.0% |
!!! | TACAAAGTGTTTTCAAATAG+TGG | - | chr8_3:19456123-19456142 | Msa1280730:intron | 25.0% |
! | TTGGCTATGTAACTAAATAA+TGG | - | chr8_3:19456344-19456363 | Msa1280730:intron | 25.0% |
! | ATCAACCATGAATTAACATT+TGG | + | chr8_3:19456777-19456796 | None:intergenic | 25.0% |
!!! | CAATTATTTTTTTGTGCAGA+GGG | - | chr8_3:19456930-19456949 | Msa1280730:intron | 25.0% |
! | ATCAACAAAGGAAAAAGTAA+GGG | - | chr8_3:19457113-19457132 | Msa1280730:intron | 25.0% |
! | GAAAATGTAAACATGAAACA+CGG | + | chr8_3:19457140-19457159 | None:intergenic | 25.0% |
!!! | ACATTTTTTATGAGAGAAGA+CGG | + | chr8_3:19457318-19457337 | None:intergenic | 25.0% |
!!! | TTTTCTAAGATTTAAGGAGA+CGG | + | chr8_3:19457357-19457376 | None:intergenic | 25.0% |
! | CTAAAAGCTAATATCATTTG+AGG | + | chr8_3:19457428-19457447 | None:intergenic | 25.0% |
!!! | TAGAGCATTTTATTCTCTTT+TGG | - | chr8_3:19457508-19457527 | Msa1280730:intron | 25.0% |
!! | GAGAATATTTTCAATCATGT+TGG | + | chr8_3:19457561-19457580 | None:intergenic | 25.0% |
!! | ACTTTGAGTGTTTTTCATTT+TGG | - | chr8_3:19457680-19457699 | Msa1280730:intron | 25.0% |
!! | CTTTGAGTGTTTTTCATTTT+GGG | - | chr8_3:19457681-19457700 | Msa1280730:intron | 25.0% |
! | TGCAGCAATTAATAGAAAAA+AGG | - | chr8_3:19457738-19457757 | Msa1280730:intron | 25.0% |
! | TAAGCAGAAAATTCAGAAAA+AGG | + | chr8_3:19458117-19458136 | None:intergenic | 25.0% |
! | ATAAAAGGAAATAATGCACA+CGG | + | chr8_3:19458557-19458576 | None:intergenic | 25.0% |
!! | GTTACTGATAAACTCAATTT+TGG | - | chr8_3:19458737-19458756 | Msa1280730:CDS | 25.0% |
!! | AATCATCTACATTTTGAACA+TGG | + | chr8_3:19458811-19458830 | None:intergenic | 25.0% |
! | TGGGTTTCTATATTTCATAT+TGG | + | chr8_3:19458945-19458964 | None:intergenic | 25.0% |
!! | TCTAATTTAGGATAAACTTC+TGG | + | chr8_3:19459007-19459026 | None:intergenic | 25.0% |
! | ATATCACAAATGGCAAAATA+TGG | - | chr8_3:19459276-19459295 | Msa1280730:intron | 25.0% |
! | TTAACATATTTAGTCCAGTA+AGG | + | chr8_3:19459619-19459638 | None:intergenic | 25.0% |
!! | TTCTTAACCTTGTTTCAAAT+AGG | + | chr8_3:19459893-19459912 | None:intergenic | 25.0% |
! | TTTTCTTACATTACTCATCC+CGG | + | chr8_3:19452436-19452455 | None:intergenic | 30.0% |
! | GGGTATACTTTTGTATTAGA+AGG | - | chr8_3:19452604-19452623 | Msa1280730:three_prime_UTR | 30.0% |
TGTATTGGGAATTTAGATGA+AGG | - | chr8_3:19452679-19452698 | Msa1280730:CDS | 30.0% | |
! | AATTTGTTCAAATTCCGCTA+CGG | - | chr8_3:19452857-19452876 | Msa1280730:CDS | 30.0% |
ATGTCTTCAATTCTTCTGTT+AGG | - | chr8_3:19452929-19452948 | Msa1280730:intron | 30.0% | |
TGTCTTCAATTCTTCTGTTA+GGG | - | chr8_3:19452930-19452949 | Msa1280730:intron | 30.0% | |
CAAGGAATCACAAAAAAGAA+AGG | + | chr8_3:19453121-19453140 | None:intergenic | 30.0% | |
!!! | CTTTTTTGTGATTCCTTGAA+AGG | - | chr8_3:19453123-19453142 | Msa1280730:CDS | 30.0% |
GGAGGCTATAAATAATAGAA+AGG | - | chr8_3:19453197-19453216 | Msa1280730:CDS | 30.0% | |
TTAATCCAGTTTCTATCAAC+TGG | - | chr8_3:19453338-19453357 | Msa1280730:CDS | 30.0% | |
!! | TAATACCAGTTGATAGAAAC+TGG | + | chr8_3:19453346-19453365 | None:intergenic | 30.0% |
AATCTTTACTGAAAATGGAC+TGG | - | chr8_3:19453392-19453411 | Msa1280730:CDS | 30.0% | |
! | ATCTTTACTGAAAATGGACT+GGG | - | chr8_3:19453393-19453412 | Msa1280730:CDS | 30.0% |
ATACAATACCTTTATTCCCA+CGG | + | chr8_3:19453504-19453523 | None:intergenic | 30.0% | |
!! | AATAAAGGTATTGTATGTGG+TGG | - | chr8_3:19453508-19453527 | Msa1280730:CDS | 30.0% |
TGACTTTGTCTTCAAGATTA+TGG | - | chr8_3:19453604-19453623 | Msa1280730:intron | 30.0% | |
!!! | GCCCAATTATATTTTTTGTG+GGG | - | chr8_3:19454027-19454046 | Msa1280730:CDS | 30.0% |
GCCCCACAAAAAATATAATT+GGG | + | chr8_3:19454031-19454050 | None:intergenic | 30.0% | |
!! | ATAATTTAACTTGTCCACAG+AGG | - | chr8_3:19454535-19454554 | Msa1280730:CDS | 30.0% |
!! | TAATTTAACTTGTCCACAGA+GGG | - | chr8_3:19454536-19454555 | Msa1280730:CDS | 30.0% |
! | GAATGACAATTAATTTGGAG+TGG | - | chr8_3:19454598-19454617 | Msa1280730:intron | 30.0% |
! | TATGTTTTCACCCTGAATTT+CGG | + | chr8_3:19454627-19454646 | None:intergenic | 30.0% |
AATTCAGGGTGAAAACATAA+AGG | - | chr8_3:19454628-19454647 | Msa1280730:intron | 30.0% | |
ATTCAGGGTGAAAACATAAA+GGG | - | chr8_3:19454629-19454648 | Msa1280730:intron | 30.0% | |
! | CAGCCAATCTTTTTAATGAT+GGG | + | chr8_3:19454777-19454796 | None:intergenic | 30.0% |
! | ACAGCCAATCTTTTTAATGA+TGG | + | chr8_3:19454778-19454797 | None:intergenic | 30.0% |
! | CAATTTGAAAGTTTTTGTGG+TGG | + | chr8_3:19454834-19454853 | None:intergenic | 30.0% |
TGATCTCTTAGTAGTTACTT+AGG | - | chr8_3:19454975-19454994 | Msa1280730:intron | 30.0% | |
GATCTCTTAGTAGTTACTTA+GGG | - | chr8_3:19454976-19454995 | Msa1280730:intron | 30.0% | |
ATCTCTTAGTAGTTACTTAG+GGG | - | chr8_3:19454977-19454996 | Msa1280730:intron | 30.0% | |
!!! | CAAATTTTGTTGTTGCTTGT+TGG | - | chr8_3:19455366-19455385 | Msa1280730:intron | 30.0% |
!!! | AATTTTGTTGTTGCTTGTTG+GGG | - | chr8_3:19455368-19455387 | Msa1280730:intron | 30.0% |
AGACTATCCAAATATCACAT+TGG | + | chr8_3:19455634-19455653 | None:intergenic | 30.0% | |
TAACTTTAATTGTTGCACCA+AGG | + | chr8_3:19455691-19455710 | None:intergenic | 30.0% | |
GTTACTATTTATGTGTCTAG+AGG | - | chr8_3:19455707-19455726 | Msa1280730:CDS | 30.0% | |
TCTACAACATAGAGAAGAAA+GGG | + | chr8_3:19455853-19455872 | None:intergenic | 30.0% | |
TTCTACAACATAGAGAAGAA+AGG | + | chr8_3:19455854-19455873 | None:intergenic | 30.0% | |
TCTCTATGTTGTAGAATTGA+TGG | - | chr8_3:19455858-19455877 | Msa1280730:intron | 30.0% | |
CTATAAGTGTTATCCAATAG+CGG | - | chr8_3:19456034-19456053 | Msa1280730:intron | 30.0% | |
! | CTTTCGAAAAGGTTGATTTA+AGG | + | chr8_3:19456461-19456480 | None:intergenic | 30.0% |
! | TAAATCAACCTTTTCGAAAG+AGG | - | chr8_3:19456461-19456480 | Msa1280730:intron | 30.0% |
CTAAAATTGTCAAGACTCAA+AGG | + | chr8_3:19456610-19456629 | None:intergenic | 30.0% | |
TGGAGGCAATAAAACAATAA+TGG | + | chr8_3:19456757-19456776 | None:intergenic | 30.0% | |
AACCATGAATTAACATTTGG+AGG | + | chr8_3:19456774-19456793 | None:intergenic | 30.0% | |
TGTTACACAAGAAAAACGAA+AGG | - | chr8_3:19456830-19456849 | Msa1280730:intron | 30.0% | |
CCTCTGCACAAAAAAATAAT+TGG | + | chr8_3:19456932-19456951 | None:intergenic | 30.0% | |
!!! | CCAATTATTTTTTTGTGCAG+AGG | - | chr8_3:19456929-19456948 | Msa1280730:intron | 30.0% |
TTCTTGTTAGAACTTGCATT+TGG | - | chr8_3:19457018-19457037 | Msa1280730:intron | 30.0% | |
AACTATCACTAACATAAGGA+AGG | + | chr8_3:19457058-19457077 | None:intergenic | 30.0% | |
TGCAAACTATCACTAACATA+AGG | + | chr8_3:19457062-19457081 | None:intergenic | 30.0% | |
CATCAACAAAGGAAAAAGTA+AGG | - | chr8_3:19457112-19457131 | Msa1280730:intron | 30.0% | |
! | TGCTAAAACAGTGTTTTCAT+TGG | - | chr8_3:19457261-19457280 | Msa1280730:intron | 30.0% |
AAAGCTAATATCATTTGAGG+TGG | + | chr8_3:19457425-19457444 | None:intergenic | 30.0% | |
! | GTTGGAGAATATTACGTTTT+AGG | + | chr8_3:19457543-19457562 | None:intergenic | 30.0% |
TTCTCATTCTTACTGAATTG+TGG | - | chr8_3:19457576-19457595 | Msa1280730:intron | 30.0% | |
!! | AGTGTTTTTCATTTTGGGAA+TGG | - | chr8_3:19457686-19457705 | Msa1280730:intron | 30.0% |
!! | GTGTTTTTCATTTTGGGAAT+GGG | - | chr8_3:19457687-19457706 | Msa1280730:intron | 30.0% |
GCAATTAATAGAAAAAAGGC+AGG | - | chr8_3:19457742-19457761 | Msa1280730:intron | 30.0% | |
!! | AAAATGCTGATTCTTCTGTT+CGG | - | chr8_3:19457903-19457922 | Msa1280730:intron | 30.0% |
TAGTACACGTCAAGAAATAA+AGG | - | chr8_3:19458159-19458178 | Msa1280730:intron | 30.0% | |
AGTGCATAATGATAAAGACT+GGG | + | chr8_3:19458439-19458458 | None:intergenic | 30.0% | |
TAGTGCATAATGATAAAGAC+TGG | + | chr8_3:19458440-19458459 | None:intergenic | 30.0% | |
! | ACTATTTTCAGACAATGTCT+TGG | - | chr8_3:19458456-19458475 | Msa1280730:intron | 30.0% |
!! | ATAATTTGTTCCTTGACTGT+AGG | - | chr8_3:19458586-19458605 | Msa1280730:intron | 30.0% |
!! | TAATTTGTTCCTTGACTGTA+GGG | - | chr8_3:19458587-19458606 | Msa1280730:intron | 30.0% |
AACATAAAGACAATGAGAGT+TGG | + | chr8_3:19458671-19458690 | None:intergenic | 30.0% | |
TGAGTTTATCAGTAACAAGA+TGG | + | chr8_3:19458733-19458752 | None:intergenic | 30.0% | |
!! | AAAGAGTATTATTTCAAGGC+AGG | - | chr8_3:19458890-19458909 | Msa1280730:intron | 30.0% |
TCAAAGTTTCTTGCAATATG+TGG | + | chr8_3:19459178-19459197 | None:intergenic | 30.0% | |
!!! | TCTGATTTTAGAATGAAGAC+AGG | - | chr8_3:19459395-19459414 | Msa1280730:intron | 30.0% |
!!! | CTGATTTTAGAATGAAGACA+GGG | - | chr8_3:19459396-19459415 | Msa1280730:intron | 30.0% |
ATGCAAGTTACATGAATAGA+CGG | - | chr8_3:19459663-19459682 | Msa1280730:intron | 30.0% | |
ATTCAAAGCAAGAATCAATG+TGG | + | chr8_3:19459844-19459863 | None:intergenic | 30.0% | |
! | ATTCTCACCTATTTGAAACA+AGG | - | chr8_3:19459883-19459902 | Msa1280730:intron | 30.0% |
! | TTGTACAATGAGGAGTTTTA+TGG | + | chr8_3:19459932-19459951 | None:intergenic | 30.0% |
GATCAGAATATTGTACAATG+AGG | + | chr8_3:19459942-19459961 | None:intergenic | 30.0% | |
AGAAGAACGAAACTCAAAAC+AGG | + | chr8_3:19452303-19452322 | None:intergenic | 35.0% | |
! | ACACTTTCAATCAGAAGTGT+CGG | - | chr8_3:19452491-19452510 | Msa1280730:three_prime_UTR | 35.0% |
TTGGGAATTTAGATGAAGGA+AGG | - | chr8_3:19452683-19452702 | Msa1280730:CDS | 35.0% | |
TGGGAATTTAGATGAAGGAA+GGG | - | chr8_3:19452684-19452703 | Msa1280730:CDS | 35.0% | |
!!! | CTGACGTCACTATTTTTACT+CGG | - | chr8_3:19452752-19452771 | Msa1280730:CDS | 35.0% |
!!! | GTCACTATTTTTACTCGGAT+TGG | - | chr8_3:19452757-19452776 | Msa1280730:CDS | 35.0% |
!!! | TTTTTACTCGGATTGGCAAA+AGG | - | chr8_3:19452764-19452783 | Msa1280730:CDS | 35.0% |
!! | TCAAATAACGGATGATGCAT+CGG | + | chr8_3:19452798-19452817 | None:intergenic | 35.0% |
TAATAAGCACTATACCGTAG+CGG | + | chr8_3:19452874-19452893 | None:intergenic | 35.0% | |
TTCAATTCTTCTGTTAGGGA+TGG | - | chr8_3:19452934-19452953 | Msa1280730:intron | 35.0% | |
!!! | GTTAACTTCCTTTTCAAGTG+TGG | - | chr8_3:19452981-19453000 | Msa1280730:intron | 35.0% |
TGCCTCCATGAAAAATCTAT+GGG | + | chr8_3:19453007-19453026 | None:intergenic | 35.0% | |
ATGCCTCCATGAAAAATCTA+TGG | + | chr8_3:19453008-19453027 | None:intergenic | 35.0% | |
ACACCGAAATTGATGTAGTA+TGG | - | chr8_3:19453085-19453104 | Msa1280730:CDS | 35.0% | |
TTTAGTTATGCGCGTAAGAT+TGG | - | chr8_3:19453176-19453195 | Msa1280730:CDS | 35.0% | |
AATAGAAAGGAGATTAGACG+TGG | - | chr8_3:19453210-19453229 | Msa1280730:CDS | 35.0% | |
!!! | CTTTGGTTTTGTGAGGAAAT+TGG | - | chr8_3:19453236-19453255 | Msa1280730:CDS | 35.0% |
! | TTTTGTGAGGAAATTGGAGT+GGG | - | chr8_3:19453242-19453261 | Msa1280730:CDS | 35.0% |
! | TGGTATTAGAGCTCCTATTT+TGG | - | chr8_3:19453358-19453377 | Msa1280730:CDS | 35.0% |
GGAGGAATCTTTACTGAAAA+TGG | - | chr8_3:19453387-19453406 | Msa1280730:CDS | 35.0% | |
GAATGACTCCAACATTTGAT+GGG | - | chr8_3:19453415-19453434 | Msa1280730:CDS | 35.0% | |
TACAATACCTTTATTCCCAC+GGG | + | chr8_3:19453503-19453522 | None:intergenic | 35.0% | |
!! | GGGAATAAAGGTATTGTATG+TGG | - | chr8_3:19453505-19453524 | Msa1280730:CDS | 35.0% |
TTATGGATCTAAGTTGCAAG+TGG | - | chr8_3:19453621-19453640 | Msa1280730:intron | 35.0% | |
TATGGATCTAAGTTGCAAGT+GGG | - | chr8_3:19453622-19453641 | Msa1280730:intron | 35.0% | |
TTCACAACCTCTCAATATCA+AGG | - | chr8_3:19453770-19453789 | Msa1280730:intron | 35.0% | |
TCACAACCTCTCAATATCAA+GGG | - | chr8_3:19453771-19453790 | Msa1280730:intron | 35.0% | |
TATTGACCCTTGATATTGAG+AGG | + | chr8_3:19453780-19453799 | None:intergenic | 35.0% | |
! | GTTTTCTAATTCTTGACCCT+TGG | + | chr8_3:19453838-19453857 | None:intergenic | 35.0% |
AAGTAAACACAAAGCAGTGA+AGG | - | chr8_3:19453860-19453879 | Msa1280730:CDS | 35.0% | |
GGCCCCACAAAAAATATAAT+TGG | + | chr8_3:19454032-19454051 | None:intergenic | 35.0% | |
AAAGGTTAGGACGTTGAAAA+GGG | - | chr8_3:19454086-19454105 | Msa1280730:CDS | 35.0% | |
! | AGAACCATTGATGATCTAGA+AGG | - | chr8_3:19454110-19454129 | Msa1280730:CDS | 35.0% |
AAGTCTCCAAAGTAAAGCTT+GGG | + | chr8_3:19454186-19454205 | None:intergenic | 35.0% | |
TAAGTCTCCAAAGTAAAGCT+TGG | + | chr8_3:19454187-19454206 | None:intergenic | 35.0% | |
TCAACCTCGAAGTTGTAAAA+CGG | + | chr8_3:19454329-19454348 | None:intergenic | 35.0% | |
GTTTCACAATAATTTGGGCT+TGG | + | chr8_3:19454457-19454476 | None:intergenic | 35.0% | |
CTGTCAATGAGTTTAGCAAT+AGG | - | chr8_3:19454681-19454700 | Msa1280730:intron | 35.0% | |
! | TTAGCAATAGGATTTTGTCG+CGG | - | chr8_3:19454693-19454712 | Msa1280730:intron | 35.0% |
TGGCAAACTTGCATATTTGT+TGG | - | chr8_3:19454721-19454740 | Msa1280730:intron | 35.0% | |
CGACCCATCATTAAAAAGAT+TGG | - | chr8_3:19454771-19454790 | Msa1280730:intron | 35.0% | |
GGTGAACATGATGAATACAT+GGG | + | chr8_3:19454923-19454942 | None:intergenic | 35.0% | |
AGGTGAACATGATGAATACA+TGG | + | chr8_3:19454924-19454943 | None:intergenic | 35.0% | |
ATTCTACACCTTCTCACAAT+AGG | - | chr8_3:19455081-19455100 | Msa1280730:intron | 35.0% | |
! | AAAAGGGGGCTTTTCAATTT+GGG | + | chr8_3:19455283-19455302 | None:intergenic | 35.0% |
! | TAAAAGGGGGCTTTTCAATT+TGG | + | chr8_3:19455284-19455303 | None:intergenic | 35.0% |
! | ATTGAAAAGCCCCCTTTTAT+TGG | - | chr8_3:19455285-19455304 | Msa1280730:intron | 35.0% |
! | ATCTAGAGCTGTCAACTTTA+GGG | + | chr8_3:19455338-19455357 | None:intergenic | 35.0% |
! | TATCTAGAGCTGTCAACTTT+AGG | + | chr8_3:19455339-19455358 | None:intergenic | 35.0% |
TCAACTTATGTTGTTCCAAG+TGG | - | chr8_3:19455488-19455507 | Msa1280730:CDS | 35.0% | |
CAACTTATGTTGTTCCAAGT+GGG | - | chr8_3:19455489-19455508 | Msa1280730:CDS | 35.0% | |
! | AGTTTGGTTCCTCTTAAGTA+AGG | - | chr8_3:19455521-19455540 | Msa1280730:intron | 35.0% |
TTCCTCTTAAGTAAGGTCTT+GGG | - | chr8_3:19455528-19455547 | Msa1280730:intron | 35.0% | |
GTCAAGTGAACTCACTTAAA+AGG | + | chr8_3:19455590-19455609 | None:intergenic | 35.0% | |
! | TGTCTAGAATAAACCTACAG+TGG | - | chr8_3:19455780-19455799 | Msa1280730:intron | 35.0% |
! | GTCTAGAATAAACCTACAGT+GGG | - | chr8_3:19455781-19455800 | Msa1280730:intron | 35.0% |
! | TGCATTTCAAGTAAGTAGAC+CGG | + | chr8_3:19456261-19456280 | None:intergenic | 35.0% |
!!! | TAGCTTGTTTTGTGCGATAT+TGG | - | chr8_3:19456325-19456344 | Msa1280730:intron | 35.0% |
GAAAAAATATGTCTGCGTCA+TGG | - | chr8_3:19456629-19456648 | Msa1280730:intron | 35.0% | |
TGCCTCCAAATGTTAATTCA+TGG | - | chr8_3:19456769-19456788 | Msa1280730:intron | 35.0% | |
TCTTGTGTAACATGTGTTGT+TGG | + | chr8_3:19456822-19456841 | None:intergenic | 35.0% | |
ACAAGAAAAACGAAAGGTGA+AGG | - | chr8_3:19456836-19456855 | Msa1280730:intron | 35.0% | |
! | GAACTTGCATTTGGCTTATT+TGG | - | chr8_3:19457027-19457046 | Msa1280730:intron | 35.0% |
CAAAGTCGAAACACAATGTT+TGG | + | chr8_3:19457666-19457685 | None:intergenic | 35.0% | |
AATGCTGTATTTACCCAGTA+CGG | + | chr8_3:19457861-19457880 | None:intergenic | 35.0% | |
TACTGGGTAAATACAGCATT+TGG | - | chr8_3:19457861-19457880 | Msa1280730:intron | 35.0% | |
ATTCTTCTGTTCGGTTTATG+AGG | - | chr8_3:19457912-19457931 | Msa1280730:intron | 35.0% | |
TTCTTCTGTTCGGTTTATGA+GGG | - | chr8_3:19457913-19457932 | Msa1280730:intron | 35.0% | |
ACGTCAAGAAATAAAGGCTA+TGG | - | chr8_3:19458165-19458184 | Msa1280730:intron | 35.0% | |
CGTCAAGAAATAAAGGCTAT+GGG | - | chr8_3:19458166-19458185 | Msa1280730:intron | 35.0% | |
GATAAGCAATGAATTCCACT+TGG | + | chr8_3:19458340-19458359 | None:intergenic | 35.0% | |
AAATAATGCACACGGAACAT+CGG | + | chr8_3:19458549-19458568 | None:intergenic | 35.0% | |
ATATTCAAACCCTACAGTCA+AGG | + | chr8_3:19458599-19458618 | None:intergenic | 35.0% | |
AGATGGAAAACATGCTTTGA+AGG | + | chr8_3:19458716-19458735 | None:intergenic | 35.0% | |
CAAAAGAAACCACATGTTCA+TGG | + | chr8_3:19458765-19458784 | None:intergenic | 35.0% | |
!! | ATTGGAAGCACTAGAAGAAA+GGG | + | chr8_3:19458927-19458946 | None:intergenic | 35.0% |
!! | TATTGGAAGCACTAGAAGAA+AGG | + | chr8_3:19458928-19458947 | None:intergenic | 35.0% |
!!! | TGAGCATCGAGAGATATTTT+GGG | + | chr8_3:19458964-19458983 | None:intergenic | 35.0% |
!!! | TTGAGCATCGAGAGATATTT+TGG | + | chr8_3:19458965-19458984 | None:intergenic | 35.0% |
CTGGAAGATAGAATCTAAGA+TGG | + | chr8_3:19458988-19459007 | None:intergenic | 35.0% | |
CGATGTCATCATCAAGAAAA+AGG | + | chr8_3:19459036-19459055 | None:intergenic | 35.0% | |
AGAAGGATTTGACAGGATTA+TGG | - | chr8_3:19459062-19459081 | Msa1280730:intron | 35.0% | |
GAAGGATTTGACAGGATTAT+GGG | - | chr8_3:19459063-19459082 | Msa1280730:intron | 35.0% | |
! | ATTATGGGAAGTTGATCTTC+AGG | - | chr8_3:19459078-19459097 | Msa1280730:intron | 35.0% |
! | TTATGGGAAGTTGATCTTCA+GGG | - | chr8_3:19459079-19459098 | Msa1280730:intron | 35.0% |
AACTTTGATCCAAATGCTTG+TGG | - | chr8_3:19459190-19459209 | Msa1280730:intron | 35.0% | |
CATGAACGTATTTGATCTCA+AGG | - | chr8_3:19459225-19459244 | Msa1280730:intron | 35.0% | |
TGGAAAAAGAAGGATATCAC+TGG | - | chr8_3:19459250-19459269 | Msa1280730:intron | 35.0% | |
TCACTGGCATATATCACAAA+TGG | - | chr8_3:19459266-19459285 | Msa1280730:intron | 35.0% | |
CAGGACTAATGACATTCTAT+GGG | - | chr8_3:19459446-19459465 | Msa1280730:intron | 35.0% | |
CACATCCACTAAATAAATCG+TGG | - | chr8_3:19459473-19459492 | Msa1280730:intron | 35.0% | |
ACATGCCACGATTTATTTAG+TGG | + | chr8_3:19459481-19459500 | None:intergenic | 35.0% | |
ATCATTGATCGATCTACAGT+TGG | + | chr8_3:19459523-19459542 | None:intergenic | 35.0% | |
! | TAACTTGCATTTCTGCAGAT+AGG | + | chr8_3:19459653-19459672 | None:intergenic | 35.0% |
CAGAAAGATGAAAGAAATGG+GGG | + | chr8_3:19459716-19459735 | None:intergenic | 35.0% | |
CCAGAAAGATGAAAGAAATG+GGG | + | chr8_3:19459717-19459736 | None:intergenic | 35.0% | |
GCCAGAAAGATGAAAGAAAT+GGG | + | chr8_3:19459718-19459737 | None:intergenic | 35.0% | |
TGCCAGAAAGATGAAAGAAA+TGG | + | chr8_3:19459719-19459738 | None:intergenic | 35.0% | |
AATGTGGAAAGGAATGATGT+TGG | + | chr8_3:19459828-19459847 | None:intergenic | 35.0% | |
AAGCAAGAATCAATGTGGAA+AGG | + | chr8_3:19459839-19459858 | None:intergenic | 35.0% | |
!! | GAGGAGTTTTATGGTAAACA+AGG | + | chr8_3:19459923-19459942 | None:intergenic | 35.0% |
! | TGTGGCCCATAGATTTTTCA+TGG | - | chr8_3:19452999-19453018 | Msa1280730:intron | 40.0% |
! | TTTCGGTGTACCGCATTATA+TGG | + | chr8_3:19453074-19453093 | None:intergenic | 40.0% |
GAGATTAGACGTGGTATCTT+TGG | - | chr8_3:19453219-19453238 | Msa1280730:CDS | 40.0% | |
!!! | GTGGTATCTTTGGTTTTGTG+AGG | - | chr8_3:19453229-19453248 | Msa1280730:CDS | 40.0% |
! | GTTTTGTGAGGAAATTGGAG+TGG | - | chr8_3:19453241-19453260 | Msa1280730:CDS | 40.0% |
TTCCTCCAAAGCTCCAAAAT+AGG | + | chr8_3:19453374-19453393 | None:intergenic | 40.0% | |
GGAATGACTCCAACATTTGA+TGG | - | chr8_3:19453414-19453433 | Msa1280730:CDS | 40.0% | |
TTATTCCCACGGGATTCTAA+TGG | + | chr8_3:19453493-19453512 | None:intergenic | 40.0% | |
TTAGAATCCCGTGGGAATAA+AGG | - | chr8_3:19453493-19453512 | Msa1280730:CDS | 40.0% | |
TGATTCTTCTCCTCCTTTCA+AGG | + | chr8_3:19453534-19453553 | None:intergenic | 40.0% | |
GCTGAAGAGATTTGAATCTG+AGG | - | chr8_3:19453579-19453598 | Msa1280730:CDS | 40.0% | |
ATGGATCTAAGTTGCAAGTG+GGG | - | chr8_3:19453623-19453642 | Msa1280730:intron | 40.0% | |
ACACAAACCTCTCAATACCA+AGG | - | chr8_3:19453818-19453837 | Msa1280730:CDS | 40.0% | |
CACAAACCTCTCAATACCAA+GGG | - | chr8_3:19453819-19453838 | Msa1280730:CDS | 40.0% | |
TAAACACAAAGCAGTGAAGG+TGG | - | chr8_3:19453863-19453882 | Msa1280730:CDS | 40.0% | |
TTGGTATGGTCACAAAGGTT+AGG | - | chr8_3:19454073-19454092 | Msa1280730:CDS | 40.0% | |
CAAAGGTTAGGACGTTGAAA+AGG | - | chr8_3:19454085-19454104 | Msa1280730:CDS | 40.0% | |
! | ACCATTGATGATCTAGAAGG+CGG | - | chr8_3:19454113-19454132 | Msa1280730:CDS | 40.0% |
TGACTTTGGTGGAAGAATCA+GGG | - | chr8_3:19454289-19454308 | Msa1280730:CDS | 40.0% | |
!!! | ATTGCCGTTTTACAACTTCG+AGG | - | chr8_3:19454322-19454341 | Msa1280730:CDS | 40.0% |
ACAAGAGTGATCACATGCAT+GGG | - | chr8_3:19454365-19454384 | Msa1280730:intron | 40.0% | |
!! | CAAAAAGCAGAGGGTATTCT+CGG | - | chr8_3:19454416-19454435 | Msa1280730:CDS | 40.0% |
ATTCTCGGTAAAGGAAGGAT+TGG | - | chr8_3:19454431-19454450 | Msa1280730:CDS | 40.0% | |
AACTATGGGCCTAACAAAGA+AGG | + | chr8_3:19454501-19454520 | None:intergenic | 40.0% | |
ATTGACAGCTGCTATTCCAT+TGG | + | chr8_3:19454669-19454688 | None:intergenic | 40.0% | |
!! | TTTGTTGGCTTTGCATTCGA+TGG | - | chr8_3:19454736-19454755 | Msa1280730:intron | 40.0% |
!! | TTGTTGGCTTTGCATTCGAT+GGG | - | chr8_3:19454737-19454756 | Msa1280730:intron | 40.0% |
CTCTTGTGAAATGCGCATTT+AGG | + | chr8_3:19454880-19454899 | None:intergenic | 40.0% | |
CTAAATGCGCATTTCACAAG+AGG | - | chr8_3:19454878-19454897 | Msa1280730:intron | 40.0% | |
CATTTCACAAGAGGAGATGA+GGG | - | chr8_3:19454887-19454906 | Msa1280730:intron | 40.0% | |
TCATGTTCACCTTGAAGACA+AGG | - | chr8_3:19454932-19454951 | Msa1280730:intron | 40.0% | |
ACCTTGAAGACAAGGTGAAA+TGG | - | chr8_3:19454940-19454959 | Msa1280730:intron | 40.0% | |
CCTTGAAGACAAGGTGAAAT+GGG | - | chr8_3:19454941-19454960 | Msa1280730:intron | 40.0% | |
ACACCTGCGGATATTATCAA+AGG | - | chr8_3:19455054-19455073 | Msa1280730:intron | 40.0% | |
! | TAGCCTTTGATAATATCCGC+AGG | + | chr8_3:19455060-19455079 | None:intergenic | 40.0% |
! | AAAGGGGGCTTTTCAATTTG+GGG | + | chr8_3:19455282-19455301 | None:intergenic | 40.0% |
TTAACGGGGGTCCAATAAAA+GGG | + | chr8_3:19455299-19455318 | None:intergenic | 40.0% | |
! | ACTTTAGGGGGCCTAAATAT+GGG | + | chr8_3:19455324-19455343 | None:intergenic | 40.0% |
! | AACTTTAGGGGGCCTAAATA+TGG | + | chr8_3:19455325-19455344 | None:intergenic | 40.0% |
! | TCTAGAGCTGTCAACTTTAG+GGG | + | chr8_3:19455337-19455356 | None:intergenic | 40.0% |
TTGTTCCAAGTGGGTAAGTA+AGG | - | chr8_3:19455498-19455517 | Msa1280730:intron | 40.0% | |
AAACTCCTTACTTACCCACT+TGG | + | chr8_3:19455506-19455525 | None:intergenic | 40.0% | |
AAGTGGGTAAGTAAGGAGTT+TGG | - | chr8_3:19455505-19455524 | Msa1280730:intron | 40.0% | |
GTTCCTCTTAAGTAAGGTCT+TGG | - | chr8_3:19455527-19455546 | Msa1280730:intron | 40.0% | |
! | TTGACTTGACTGGTATTAGC+TGG | - | chr8_3:19455605-19455624 | Msa1280730:intron | 40.0% |
TGACTTGACTGGTATTAGCT+GGG | - | chr8_3:19455606-19455625 | Msa1280730:intron | 40.0% | |
CTGGGATCCAATGTGATATT+TGG | - | chr8_3:19455624-19455643 | Msa1280730:intron | 40.0% | |
AGCATAAACACGCACAAGAA+TGG | - | chr8_3:19455656-19455675 | Msa1280730:CDS | 40.0% | |
ATTAGACTCTTGCAAGTGCA+AGG | - | chr8_3:19455750-19455769 | Msa1280730:intron | 40.0% | |
GTTCTATAAAGCTCCTACCA+TGG | + | chr8_3:19455824-19455843 | None:intergenic | 40.0% | |
! | TTGTAGAATTGATGGTCGAG+AGG | - | chr8_3:19455866-19455885 | Msa1280730:intron | 40.0% |
ACAGTCTATTAGCGCAAATG+AGG | + | chr8_3:19455902-19455921 | None:intergenic | 40.0% | |
CAATGCTATAACACCGCTAT+TGG | + | chr8_3:19456050-19456069 | None:intergenic | 40.0% | |
TGTATCCAGCACAGATGATA+TGG | - | chr8_3:19456582-19456601 | Msa1280730:intron | 40.0% | |
GTATCCAGCACAGATGATAT+GGG | - | chr8_3:19456583-19456602 | Msa1280730:intron | 40.0% | |
TATCCAGCACAGATGATATG+GGG | - | chr8_3:19456584-19456603 | Msa1280730:intron | 40.0% | |
CACATTAGTCCAAACCTCAT+AGG | + | chr8_3:19456686-19456705 | None:intergenic | 40.0% | |
GAAAAACGAAAGGTGAAGGA+AGG | - | chr8_3:19456840-19456859 | Msa1280730:intron | 40.0% | |
ACAAAATGATGCTCACCCTT+CGG | + | chr8_3:19456992-19457011 | None:intergenic | 40.0% | |
AGAACATCGTTGTGAATGCT+TGG | + | chr8_3:19457636-19457655 | None:intergenic | 40.0% | |
TGGGTAAATACAGCATTTGG+AGG | - | chr8_3:19457864-19457883 | Msa1280730:intron | 40.0% | |
TATGAGGGACCAGATCATTA+TGG | - | chr8_3:19457928-19457947 | Msa1280730:intron | 40.0% | |
ATACCCTAGCCATAATGATC+TGG | + | chr8_3:19457940-19457959 | None:intergenic | 40.0% | |
AAAGAGAGTCAACATGCGTT+AGG | - | chr8_3:19458022-19458041 | Msa1280730:intron | 40.0% | |
CTGATTCAGATCTTCATCAC+AGG | - | chr8_3:19458056-19458075 | Msa1280730:intron | 40.0% | |
CTTCATCACAGGTTCGAATT+AGG | - | chr8_3:19458067-19458086 | Msa1280730:intron | 40.0% | |
GCAATTGTATGACAGCAAGT+TGG | - | chr8_3:19458213-19458232 | Msa1280730:intron | 40.0% | |
AGACAGCTGATGAGAAAGTT+AGG | - | chr8_3:19458263-19458282 | Msa1280730:intron | 40.0% | |
AATTCCACTTGGTATGGTCT+TGG | + | chr8_3:19458329-19458348 | None:intergenic | 40.0% | |
GCAATGAATTCCACTTGGTA+TGG | + | chr8_3:19458335-19458354 | None:intergenic | 40.0% | |
GGAGGTAGTAATCTATTGTG+AGG | + | chr8_3:19458369-19458388 | None:intergenic | 40.0% | |
!!! | ACTTCCTTTTTTCAGGAGGA+AGG | + | chr8_3:19458390-19458409 | None:intergenic | 40.0% |
!!! | CTAGGGAACTTCCTTTTTTC+AGG | + | chr8_3:19458397-19458416 | None:intergenic | 40.0% |
CTGAAAAAAGGAAGTTCCCT+AGG | - | chr8_3:19458395-19458414 | Msa1280730:intron | 40.0% | |
AACAGCTGAGTTCACAACAA+CGG | + | chr8_3:19458488-19458507 | None:intergenic | 40.0% | |
CTCAGCTGTTACAAATGCAA+AGG | - | chr8_3:19458498-19458517 | Msa1280730:intron | 40.0% | |
GTTCTTGTGTTCAATGTTGC+AGG | - | chr8_3:19458688-19458707 | Msa1280730:intron | 40.0% | |
!!! | ATTTTGGAGCCATGAACATG+TGG | - | chr8_3:19458753-19458772 | Msa1280730:CDS | 40.0% |
! | TGGTTTCTTTTGAACCTTCC+TGG | - | chr8_3:19458773-19458792 | Msa1280730:intron | 40.0% |
!! | ACATGGATTGTAGCTTTTCC+AGG | + | chr8_3:19458794-19458813 | None:intergenic | 40.0% |
TGATGACATCGTTGTTCAGA+AGG | - | chr8_3:19459045-19459064 | Msa1280730:intron | 40.0% | |
GTTGTTCAGAAGGATTTGAC+AGG | - | chr8_3:19459055-19459074 | Msa1280730:intron | 40.0% | |
! | TATGGGAAGTTGATCTTCAG+GGG | - | chr8_3:19459080-19459099 | Msa1280730:intron | 40.0% |
GATCTTCAGGGGAAAGTAAA+TGG | - | chr8_3:19459091-19459110 | Msa1280730:intron | 40.0% | |
AATGGTGCAGTTGAAACATG+TGG | - | chr8_3:19459109-19459128 | Msa1280730:intron | 40.0% | |
TTGATCCAAATGCTTGTGGT+TGG | - | chr8_3:19459194-19459213 | Msa1280730:intron | 40.0% | |
TGATCCAAATGCTTGTGGTT+GGG | - | chr8_3:19459195-19459214 | Msa1280730:intron | 40.0% | |
ACGTATTTGATCTCAAGGAG+TGG | - | chr8_3:19459230-19459249 | Msa1280730:intron | 40.0% | |
TCTCAAGGAGTGGAAAAAGA+AGG | - | chr8_3:19459240-19459259 | Msa1280730:intron | 40.0% | |
TAGAATGTCATTAGTCCTGG+AGG | + | chr8_3:19459445-19459464 | None:intergenic | 40.0% | |
CCATAGAATGTCATTAGTCC+TGG | + | chr8_3:19459448-19459467 | None:intergenic | 40.0% | |
CCAGGACTAATGACATTCTA+TGG | - | chr8_3:19459445-19459464 | Msa1280730:intron | 40.0% | |
AATAAATCGTGGCATGTCCT+TGG | - | chr8_3:19459484-19459503 | Msa1280730:intron | 40.0% | |
TTGGACTATAACCCAAACCA+AGG | + | chr8_3:19459504-19459523 | None:intergenic | 40.0% | |
GCAGCAGTTGTACATTACAA+TGG | - | chr8_3:19459550-19459569 | Msa1280730:intron | 40.0% | |
ACAATGGTAATATGAAGCCG+TGG | - | chr8_3:19459566-19459585 | Msa1280730:intron | 40.0% | |
CGATTGCCATGACAAAGTAT+CGG | - | chr8_3:19459593-19459612 | Msa1280730:intron | 40.0% | |
CCCCATTTCTTTCATCTTTC+TGG | - | chr8_3:19459714-19459733 | Msa1280730:intron | 40.0% | |
CTAGTGTCTTGCTAGAATGA+TGG | - | chr8_3:19459751-19459770 | Msa1280730:intron | 40.0% | |
TTCTGATCTGATGTTCAGAC+AGG | - | chr8_3:19459954-19459973 | Msa1280730:intron | 40.0% | |
TTTGCTTCCGTTCTTAGCGA+AGG | + | chr8_3:19452268-19452287 | None:intergenic | 45.0% | |
TTCGCTAAGAACGGAAGCAA+AGG | - | chr8_3:19452267-19452286 | Msa1280730:three_prime_UTR | 45.0% | |
TCTTCTCTGTGTTCTTACGC+CGG | - | chr8_3:19452317-19452336 | Msa1280730:three_prime_UTR | 45.0% | |
!! | ACGCCGGTTGTTTTCTTCTT+CGG | - | chr8_3:19452333-19452352 | Msa1280730:three_prime_UTR | 45.0% |
CGACCGAAGAAGAAAACAAC+CGG | + | chr8_3:19452339-19452358 | None:intergenic | 45.0% | |
!! | GTTGTTTTCTTCTTCGGTCG+AGG | - | chr8_3:19452339-19452358 | Msa1280730:three_prime_UTR | 45.0% |
TCTATGGGCCACACTTGAAA+AGG | + | chr8_3:19452992-19453011 | None:intergenic | 45.0% | |
! | GGCCCATAGATTTTTCATGG+AGG | - | chr8_3:19453002-19453021 | Msa1280730:intron | 45.0% |
AGTTATGCGCGTAAGATTGG+AGG | - | chr8_3:19453179-19453198 | Msa1280730:CDS | 45.0% | |
!!! | GAGCTCCTATTTTGGAGCTT+TGG | - | chr8_3:19453366-19453385 | Msa1280730:CDS | 45.0% |
!!! | CTCCTATTTTGGAGCTTTGG+AGG | - | chr8_3:19453369-19453388 | Msa1280730:CDS | 45.0% |
GACTCCAACATTTGATGGGA+AGG | - | chr8_3:19453419-19453438 | Msa1280730:CDS | 45.0% | |
TCCAACATTTGATGGGAAGG+AGG | - | chr8_3:19453422-19453441 | Msa1280730:CDS | 45.0% | |
TTGATGGGAAGGAGGCTTAT+TGG | - | chr8_3:19453430-19453449 | Msa1280730:CDS | 45.0% | |
TTGTAGCCATTAGAATCCCG+TGG | - | chr8_3:19453484-19453503 | Msa1280730:CDS | 45.0% | |
TGTAGCCATTAGAATCCCGT+GGG | - | chr8_3:19453485-19453504 | Msa1280730:CDS | 45.0% | |
! | TTGTATGTGGTGGCCTTGAA+AGG | - | chr8_3:19453518-19453537 | Msa1280730:CDS | 45.0% |
CAGAATGCATCCTGAGAAGA+AGG | - | chr8_3:19453552-19453571 | Msa1280730:CDS | 45.0% | |
TGGATCTAAGTTGCAAGTGG+GGG | - | chr8_3:19453624-19453643 | Msa1280730:intron | 45.0% | |
AGATCAGAGCCAGGAAAAAG+TGG | - | chr8_3:19453656-19453675 | Msa1280730:intron | 45.0% | |
! | TCTTGACCCTTGGTATTGAG+AGG | + | chr8_3:19453828-19453847 | None:intergenic | 45.0% |
GAACTGACAGAAGCAGGTAA+TGG | - | chr8_3:19453949-19453968 | Msa1280730:CDS | 45.0% | |
! | CCATTGATGATCTAGAAGGC+GGG | - | chr8_3:19454114-19454133 | Msa1280730:CDS | 45.0% |
GTCGAACCCAAGCTTTACTT+TGG | - | chr8_3:19454177-19454196 | Msa1280730:intron | 45.0% | |
GTGACTTTGGTGGAAGAATC+AGG | - | chr8_3:19454288-19454307 | Msa1280730:CDS | 45.0% | |
GACTTTGGTGGAAGAATCAG+GGG | - | chr8_3:19454290-19454309 | Msa1280730:CDS | 45.0% | |
ACTTTGGTGGAAGAATCAGG+GGG | - | chr8_3:19454291-19454310 | Msa1280730:CDS | 45.0% | |
GACAAGAGTGATCACATGCA+TGG | - | chr8_3:19454364-19454383 | Msa1280730:intron | 45.0% | |
CAAGAGTGATCACATGCATG+GGG | - | chr8_3:19454366-19454385 | Msa1280730:intron | 45.0% | |
!! | TGCTTTTTGTTTGCGCCCAA+CGG | + | chr8_3:19454405-19454424 | None:intergenic | 45.0% |
! | AGGGTATTCTCGGTAAAGGA+AGG | - | chr8_3:19454426-19454445 | Msa1280730:CDS | 45.0% |
GCTAACTGCTTGCTTACCTT+TGG | + | chr8_3:19454566-19454585 | None:intergenic | 45.0% | |
GGACAAAAGATCACGTCCAA+TGG | - | chr8_3:19454650-19454669 | Msa1280730:intron | 45.0% | |
! | AATAGGATTTTGTCGCGGCA+TGG | - | chr8_3:19454698-19454717 | Msa1280730:intron | 45.0% |
GCATTTCACAAGAGGAGATG+AGG | - | chr8_3:19454886-19454905 | Msa1280730:intron | 45.0% | |
CCCATTTCACCTTGTCTTCA+AGG | + | chr8_3:19454944-19454963 | None:intergenic | 45.0% | |
! | ACCTACAGATGTGCTGGTAA+GGG | + | chr8_3:19455030-19455049 | None:intergenic | 45.0% |
GTAAAGACCTACAGATGTGC+TGG | + | chr8_3:19455036-19455055 | None:intergenic | 45.0% | |
TCTGTAGGTCTTTACACCTG+CGG | - | chr8_3:19455041-19455060 | Msa1280730:intron | 45.0% | |
TAACGGGGGTCCAATAAAAG+GGG | + | chr8_3:19455298-19455317 | None:intergenic | 45.0% | |
CTTAACGGGGGTCCAATAAA+AGG | + | chr8_3:19455300-19455319 | None:intergenic | 45.0% | |
CTAAATATGGGGCTTAACGG+GGG | + | chr8_3:19455312-19455331 | None:intergenic | 45.0% | |
CCTAAATATGGGGCTTAACG+GGG | + | chr8_3:19455313-19455332 | None:intergenic | 45.0% | |
GCCTAAATATGGGGCTTAAC+GGG | + | chr8_3:19455314-19455333 | None:intergenic | 45.0% | |
GGCCTAAATATGGGGCTTAA+CGG | + | chr8_3:19455315-19455334 | None:intergenic | 45.0% | |
! | CTTTAGGGGGCCTAAATATG+GGG | + | chr8_3:19455323-19455342 | None:intergenic | 45.0% |
CTAGAGCTGTCAACTTTAGG+GGG | + | chr8_3:19455336-19455355 | None:intergenic | 45.0% | |
!! | TTGTTGGGGTTTTGTGCTGT+TGG | - | chr8_3:19455382-19455401 | Msa1280730:intron | 45.0% |
TGCTGTTGGAACTTCTGTGA+TGG | - | chr8_3:19455396-19455415 | Msa1280730:intron | 45.0% | |
GACCCAAGACCTTACTTAAG+AGG | + | chr8_3:19455533-19455552 | None:intergenic | 45.0% | |
! | GTGAGTTCACTTGACTTGAC+TGG | - | chr8_3:19455595-19455614 | Msa1280730:intron | 45.0% |
AACACGCACAAGAATGGAAC+AGG | - | chr8_3:19455662-19455681 | Msa1280730:CDS | 45.0% | |
ACACGCACAAGAATGGAACA+GGG | - | chr8_3:19455663-19455682 | Msa1280730:CDS | 45.0% | |
CTCTTGCAAGTGCAAGGTAA+AGG | - | chr8_3:19455756-19455775 | Msa1280730:intron | 45.0% | |
TCCATTCCTGGATTCTTCCA+TGG | - | chr8_3:19455804-19455823 | Msa1280730:intron | 45.0% | |
ACCATGGAAGAATCCAGGAA+TGG | + | chr8_3:19455808-19455827 | None:intergenic | 45.0% | |
TTCCTGGATTCTTCCATGGT+AGG | - | chr8_3:19455808-19455827 | Msa1280730:intron | 45.0% | |
TTCAGCTGCTGCAAATAGAC+AGG | - | chr8_3:19456302-19456321 | Msa1280730:intron | 45.0% | |
TGCATGCCATTCTCTCCATT+TGG | + | chr8_3:19456430-19456449 | None:intergenic | 45.0% | |
TGAGCTTGCCTCTTTCGAAA+AGG | + | chr8_3:19456472-19456491 | None:intergenic | 45.0% | |
! | TTTTCGAAAGAGGCAAGCTC+AGG | - | chr8_3:19456471-19456490 | Msa1280730:intron | 45.0% |
GACTTCAAATGCTGCCTATG+AGG | - | chr8_3:19456669-19456688 | Msa1280730:intron | 45.0% | |
CAAATGCTGCCTATGAGGTT+TGG | - | chr8_3:19456674-19456693 | Msa1280730:intron | 45.0% | |
GTGAAGGAAGGAAGATCTTC+AGG | - | chr8_3:19456852-19456871 | Msa1280730:intron | 45.0% | |
AAGGAAGGAAGATCTTCAGG+TGG | - | chr8_3:19456855-19456874 | Msa1280730:intron | 45.0% | |
AAGACGGAAGACTATCTTGG+AGG | + | chr8_3:19457302-19457321 | None:intergenic | 45.0% | |
GAGAAGACGGAAGACTATCT+TGG | + | chr8_3:19457305-19457324 | None:intergenic | 45.0% | |
CGTTGTGAATGCTTGGCAAT+TGG | + | chr8_3:19457629-19457648 | None:intergenic | 45.0% | |
!! | TGCTGCTGAGTTGGTAAAGA+TGG | - | chr8_3:19457772-19457791 | Msa1280730:intron | 45.0% |
GGACCAGATCATTATGGCTA+GGG | - | chr8_3:19457934-19457953 | Msa1280730:intron | 45.0% | |
TATGGGCCAAGTTCTGTCAA+AGG | - | chr8_3:19458183-19458202 | Msa1280730:intron | 45.0% | |
!! | TATGACAGCAAGTTGGTCAC+TGG | - | chr8_3:19458220-19458239 | Msa1280730:intron | 45.0% |
AAGCACATTCCTCAGTCAGT+TGG | - | chr8_3:19458300-19458319 | Msa1280730:intron | 45.0% | |
ACCTCCTTCCTCCTGAAAAA+AGG | - | chr8_3:19458383-19458402 | Msa1280730:intron | 45.0% | |
!!! | TCCTTTTTTCAGGAGGAAGG+AGG | + | chr8_3:19458387-19458406 | None:intergenic | 45.0% |
!!! | GGGAACTTCCTTTTTTCAGG+AGG | + | chr8_3:19458394-19458413 | None:intergenic | 45.0% |
TCTCCAAGTTCTCACTCCTA+GGG | + | chr8_3:19458414-19458433 | None:intergenic | 45.0% | |
TTCTCCAAGTTCTCACTCCT+AGG | + | chr8_3:19458415-19458434 | None:intergenic | 45.0% | |
! | GGATTGTAGCTTTTCCAGGA+AGG | + | chr8_3:19458790-19458809 | None:intergenic | 45.0% |
ATTCAAGCTGCCGCAATACA+GGG | + | chr8_3:19458859-19458878 | None:intergenic | 45.0% | |
TAGAAGAAAGGGTGGTTGGA+TGG | + | chr8_3:19458916-19458935 | None:intergenic | 45.0% | |
TATGCCCAACCACAAGCATT+TGG | + | chr8_3:19459202-19459221 | None:intergenic | 45.0% | |
AATGCTTGTGGTTGGGCATA+TGG | - | chr8_3:19459202-19459221 | Msa1280730:intron | 45.0% | |
! | AGAATGAAGACAGGGTGCTT+TGG | - | chr8_3:19459404-19459423 | Msa1280730:intron | 45.0% |
GTAAGGCCGATACTTTGTCA+TGG | + | chr8_3:19459602-19459621 | None:intergenic | 45.0% | |
!! | TGACAAAGTATCGGCCTTAC+TGG | - | chr8_3:19459602-19459621 | Msa1280730:intron | 45.0% |
ATGAAAGAAATGGGGGATGC+TGG | + | chr8_3:19459709-19459728 | None:intergenic | 45.0% | |
TGGTCAGTCTTGAACCTAGA+AGG | - | chr8_3:19459771-19459790 | Msa1280730:intron | 45.0% | |
!! | GCATTGACTCTGTTCCTTCT+AGG | + | chr8_3:19459788-19459807 | None:intergenic | 45.0% |
GTGGAAAGGAATGATGTTGG+AGG | + | chr8_3:19459825-19459844 | None:intergenic | 45.0% | |
!!! | ATATTTTTTTTTTAATTGAT+TGG | - | chr8_3:19452583-19452602 | Msa1280730:three_prime_UTR | 5.0% |
!!! | TATTTTTTTTTTAATTGATT+GGG | - | chr8_3:19452584-19452603 | Msa1280730:three_prime_UTR | 5.0% |
!! | AAAAAATTAAATGTTAAATA+TGG | + | chr8_3:19456513-19456532 | None:intergenic | 5.0% |
!!! | TCTAATTAATATTATATTTT+AGG | - | chr8_3:19456546-19456565 | Msa1280730:intron | 5.0% |
GGGGTTTCCTTCGCTAAGAA+CGG | - | chr8_3:19452258-19452277 | Msa1280730:three_prime_UTR | 50.0% | |
GCCTCCTTCCCATCAAATGT+TGG | + | chr8_3:19453426-19453445 | None:intergenic | 50.0% | |
ATGGGAAGGAGGCTTATTGG+TGG | - | chr8_3:19453433-19453452 | Msa1280730:CDS | 50.0% | |
! | TATGTGGTGGCCTTGAAAGG+AGG | - | chr8_3:19453521-19453540 | Msa1280730:CDS | 50.0% |
TTCAGCACTGCCTTCTTCTC+AGG | + | chr8_3:19453565-19453584 | None:intergenic | 50.0% | |
CGAAGTTCAAGATCAGAGCC+AGG | - | chr8_3:19453647-19453666 | Msa1280730:intron | 50.0% | |
TCAGAGCCAGGAAAAAGTGG+TGG | - | chr8_3:19453659-19453678 | Msa1280730:intron | 50.0% | |
CAGAGCCAGGAAAAAGTGGT+GGG | - | chr8_3:19453660-19453679 | Msa1280730:intron | 50.0% | |
AGAGCCAGGAAAAAGTGGTG+GGG | - | chr8_3:19453661-19453680 | Msa1280730:intron | 50.0% | |
ACACAAAGCAGTGAAGGTGG+TGG | - | chr8_3:19453866-19453885 | Msa1280730:CDS | 50.0% | |
GAGAAGGAACTGACAGAAGC+AGG | - | chr8_3:19453943-19453962 | Msa1280730:CDS | 50.0% | |
!! | GAAGCAGGTAATGGAGCGAA+AGG | - | chr8_3:19453958-19453977 | Msa1280730:CDS | 50.0% |
!! | GGCCTAGTAGAAGCATCCAA+GGG | - | chr8_3:19454048-19454067 | Msa1280730:CDS | 50.0% |
CCCGCCTTCTAGATCATCAA+TGG | + | chr8_3:19454117-19454136 | None:intergenic | 50.0% | |
ACAGTGCATCTGTCCCATTC+AGG | + | chr8_3:19454141-19454160 | None:intergenic | 50.0% | |
CTTGGGTTCGACAGTTCAAG+TGG | + | chr8_3:19454169-19454188 | None:intergenic | 50.0% | |
ATGCCGGTACAAGTATCTGG+CGG | + | chr8_3:19454259-19454278 | None:intergenic | 50.0% | |
ACCATGCCGGTACAAGTATC+TGG | + | chr8_3:19454262-19454281 | None:intergenic | 50.0% | |
! | AGATACTTGTACCGGCATGG+TGG | - | chr8_3:19454261-19454280 | Msa1280730:CDS | 50.0% |
CTTTGGTGGAAGAATCAGGG+GGG | - | chr8_3:19454292-19454311 | Msa1280730:CDS | 50.0% | |
!! | GCTTTTTGTTTGCGCCCAAC+GGG | + | chr8_3:19454404-19454423 | None:intergenic | 50.0% |
TGGGCGCAAACAAAAAGCAG+AGG | - | chr8_3:19454406-19454425 | Msa1280730:CDS | 50.0% | |
GGGCGCAAACAAAAAGCAGA+GGG | - | chr8_3:19454407-19454426 | Msa1280730:CDS | 50.0% | |
!! | GCAGAGGGTATTCTCGGTAA+AGG | - | chr8_3:19454422-19454441 | Msa1280730:CDS | 50.0% |
! | TACCTTTGGTGTACCCTCTG+TGG | + | chr8_3:19454552-19454571 | None:intergenic | 50.0% |
TGGAGTGGAGACCGAAATTC+AGG | - | chr8_3:19454613-19454632 | Msa1280730:intron | 50.0% | |
GGAGTGGAGACCGAAATTCA+GGG | - | chr8_3:19454614-19454633 | Msa1280730:intron | 50.0% | |
GGCAGCTTAATGTCTCTCAG+AGG | + | chr8_3:19454813-19454832 | None:intergenic | 50.0% | |
ACAAGAGGAGATGAGGGCTT+TGG | - | chr8_3:19454893-19454912 | Msa1280730:intron | 50.0% | |
! | ACTTAGGGGTGTGTGATGAG+AGG | - | chr8_3:19454991-19455010 | Msa1280730:intron | 50.0% |
TCCCTTACCAGCACATCTGT+AGG | - | chr8_3:19455026-19455045 | Msa1280730:intron | 50.0% | |
! | GACCTACAGATGTGCTGGTA+AGG | + | chr8_3:19455031-19455050 | None:intergenic | 50.0% |
AACGGGGGTCCAATAAAAGG+GGG | + | chr8_3:19455297-19455316 | None:intergenic | 50.0% | |
CCCCGTTAAGCCCCATATTT+AGG | - | chr8_3:19455310-19455329 | Msa1280730:intron | 50.0% | |
AAGAATGGAACAGGGAGCCT+TGG | - | chr8_3:19455671-19455690 | Msa1280730:CDS | 50.0% | |
CTCCTACCATGGAAGAATCC+AGG | + | chr8_3:19455813-19455832 | None:intergenic | 50.0% | |
CATTCTCTCCATTTGGCAGC+TGG | + | chr8_3:19456423-19456442 | None:intergenic | 50.0% | |
CAGCTGCCAAATGGAGAGAA+TGG | - | chr8_3:19456421-19456440 | Msa1280730:intron | 50.0% | |
TCTGCGTCATGGAGAGTTGT+TGG | - | chr8_3:19456640-19456659 | Msa1280730:intron | 50.0% | |
TGGACTAATGTGCTTCTGCG+TGG | - | chr8_3:19456694-19456713 | Msa1280730:intron | 50.0% | |
ATCTGTTGAGTCAGCCGTAC+TGG | - | chr8_3:19457844-19457863 | Msa1280730:intron | 50.0% | |
TCTGTTGAGTCAGCCGTACT+GGG | - | chr8_3:19457845-19457864 | Msa1280730:intron | 50.0% | |
GGGACCAGATCATTATGGCT+AGG | - | chr8_3:19457933-19457952 | Msa1280730:intron | 50.0% | |
TGTTGCAAGAGCTGCAGTCT+AGG | - | chr8_3:19457996-19458015 | Msa1280730:intron | 50.0% | |
GCCAAGTTCTGTCAAAGGCA+CGG | - | chr8_3:19458188-19458207 | Msa1280730:intron | 50.0% | |
! | CCAAGTTCTGTCAAAGGCAC+GGG | - | chr8_3:19458189-19458208 | Msa1280730:intron | 50.0% |
! | CAAGTTCTGTCAAAGGCACG+GGG | - | chr8_3:19458190-19458209 | Msa1280730:intron | 50.0% |
! | AAGTTCTGTCAAAGGCACGG+GGG | - | chr8_3:19458191-19458210 | Msa1280730:intron | 50.0% |
GTTCCCTAGGAGTGAGAACT+TGG | - | chr8_3:19458408-19458427 | Msa1280730:intron | 50.0% | |
CATCCTACTGCCCTGTATTG+CGG | - | chr8_3:19458846-19458865 | Msa1280730:intron | 50.0% | |
GATTCAAGCTGCCGCAATAC+AGG | + | chr8_3:19458860-19458879 | None:intergenic | 50.0% | |
GCACTAGAAGAAAGGGTGGT+TGG | + | chr8_3:19458920-19458939 | None:intergenic | 50.0% | |
!! | GGAAGCACTAGAAGAAAGGG+TGG | + | chr8_3:19458924-19458943 | None:intergenic | 50.0% |
ATCGTGGCATGTCCTTGGTT+TGG | - | chr8_3:19459489-19459508 | Msa1280730:intron | 50.0% | |
TCGTGGCATGTCCTTGGTTT+GGG | - | chr8_3:19459490-19459509 | Msa1280730:intron | 50.0% | |
AAGGAAACCCCTCGCTTTGG+CGG | + | chr8_3:19452249-19452268 | None:intergenic | 55.0% | |
! | GGTCGAGGTTTTCACGTTGC+TGG | - | chr8_3:19452354-19452373 | Msa1280730:three_prime_UTR | 55.0% |
GTGTCAACGTGTCAGTGTCG+TGG | + | chr8_3:19452414-19452433 | None:intergenic | 55.0% | |
CGACACTGACACGTTGACAC+CGG | - | chr8_3:19452414-19452433 | Msa1280730:three_prime_UTR | 55.0% | |
GACACTGACACGTTGACACC+GGG | - | chr8_3:19452415-19452434 | Msa1280730:three_prime_UTR | 55.0% | |
GAGCCAGGAAAAAGTGGTGG+GGG | - | chr8_3:19453662-19453681 | Msa1280730:intron | 55.0% | |
! | AGCCAGGAAAAAGTGGTGGG+GGG | - | chr8_3:19453663-19453682 | Msa1280730:intron | 55.0% |
!!! | TACCCCCCACCACTTTTTCC+TGG | + | chr8_3:19453668-19453687 | None:intergenic | 55.0% |
CCTTCTCTCTGTCTCTCCTG+TGG | + | chr8_3:19453930-19453949 | None:intergenic | 55.0% | |
CCACAGGAGAGACAGAGAGA+AGG | - | chr8_3:19453927-19453946 | Msa1280730:CDS | 55.0% | |
!! | TGGAGCGAAAGGTGTTGCCA+TGG | - | chr8_3:19453969-19453988 | Msa1280730:CDS | 55.0% |
!! | GGAGCGAAAGGTGTTGCCAT+GGG | - | chr8_3:19453970-19453989 | Msa1280730:CDS | 55.0% |
TGTTGCCATGGGTCGTGCAA+TGG | - | chr8_3:19453981-19454000 | Msa1280730:CDS | 55.0% | |
TTCCACCATTGCACGACCCA+TGG | + | chr8_3:19453989-19454008 | None:intergenic | 55.0% | |
!! | GGGCCTAGTAGAAGCATCCA+AGG | - | chr8_3:19454047-19454066 | Msa1280730:CDS | 55.0% |
CGCCCTTGGATGCTTCTACT+AGG | + | chr8_3:19454053-19454072 | None:intergenic | 55.0% | |
!! | GTAGAAGCATCCAAGGGCGT+TGG | - | chr8_3:19454054-19454073 | Msa1280730:CDS | 55.0% |
!! | AGCATCCAAGGGCGTTGGTA+TGG | - | chr8_3:19454059-19454078 | Msa1280730:CDS | 55.0% |
TGTGACCATACCAACGCCCT+TGG | + | chr8_3:19454067-19454086 | None:intergenic | 55.0% | |
!! | GGGCGTTGGTATGGTCACAA+AGG | - | chr8_3:19454068-19454087 | Msa1280730:CDS | 55.0% |
TCTAGAAGGCGGGTCCTGAA+TGG | - | chr8_3:19454124-19454143 | Msa1280730:CDS | 55.0% | |
CTAGAAGGCGGGTCCTGAAT+GGG | - | chr8_3:19454125-19454144 | Msa1280730:CDS | 55.0% | |
CCTCCGCCAGATACTTGTAC+CGG | - | chr8_3:19454253-19454272 | Msa1280730:CDS | 55.0% | |
! | GCCAGATACTTGTACCGGCA+TGG | - | chr8_3:19454258-19454277 | Msa1280730:CDS | 55.0% |
AAGTCACACAGCCACCATGC+CGG | + | chr8_3:19454275-19454294 | None:intergenic | 55.0% | |
GCATGGTGGCTGTGTGACTT+TGG | - | chr8_3:19454275-19454294 | Msa1280730:CDS | 55.0% | |
TGGTGGCTGTGTGACTTTGG+TGG | - | chr8_3:19454278-19454297 | Msa1280730:CDS | 55.0% | |
!! | GGCCAGTTTGTTGTCCCGTT+GGG | - | chr8_3:19454387-19454406 | Msa1280730:CDS | 55.0% |
! | GTCCACAGAGGGTACACCAA+AGG | - | chr8_3:19454547-19454566 | Msa1280730:CDS | 55.0% |
! | AGGATTTTGTCGCGGCATGG+TGG | - | chr8_3:19454701-19454720 | Msa1280730:intron | 55.0% |
! | TGGTGGCGCCTATTGTGAGA+AGG | + | chr8_3:19455092-19455111 | None:intergenic | 55.0% |
ACCTACAGTGGGTCCATTCC+TGG | - | chr8_3:19455792-19455811 | Msa1280730:intron | 55.0% | |
TCCAGGAATGGACCCACTGT+AGG | + | chr8_3:19455796-19455815 | None:intergenic | 55.0% | |
AGGCCCCATATCATCTGTGC+TGG | + | chr8_3:19456590-19456609 | None:intergenic | 55.0% | |
GTGCAGAGGGTCTTACTCAC+TGG | - | chr8_3:19456943-19456962 | Msa1280730:intron | 55.0% | |
CCCTTCGGACTTGTCGTGTA+GGG | + | chr8_3:19456977-19456996 | None:intergenic | 55.0% | |
CCCTACACGACAAGTCCGAA+GGG | - | chr8_3:19456974-19456993 | Msa1280730:intron | 55.0% | |
ACCCTTCGGACTTGTCGTGT+AGG | + | chr8_3:19456978-19456997 | None:intergenic | 55.0% | |
! | GGAAAAGCGTGCTGCTGAGT+TGG | - | chr8_3:19457763-19457782 | Msa1280730:intron | 55.0% |
CCCGTGCCTTTGACAGAACT+TGG | + | chr8_3:19458192-19458211 | None:intergenic | 55.0% | |
TCTTGGCAGCCAACTGACTG+AGG | + | chr8_3:19458312-19458331 | None:intergenic | 55.0% | |
GCTGCCAAGACCATACCAAG+TGG | - | chr8_3:19458322-19458341 | Msa1280730:intron | 55.0% | |
!! | AGACAGGGTGCTTTGGAAGC+TGG | - | chr8_3:19459411-19459430 | Msa1280730:intron | 55.0% |
!! | GACAGGGTGCTTTGGAAGCT+GGG | - | chr8_3:19459412-19459431 | Msa1280730:intron | 55.0% |
!! | ACAGGGTGCTTTGGAAGCTG+GGG | - | chr8_3:19459413-19459432 | Msa1280730:intron | 55.0% |
AAGCTGGGGACATTACCTCC+AGG | - | chr8_3:19459427-19459446 | Msa1280730:intron | 55.0% | |
GTCATGGCAATCGCTAGCCA+CGG | + | chr8_3:19459586-19459605 | None:intergenic | 55.0% | |
TACGCAATGCCGCCAAAGCG+AGG | - | chr8_3:19452237-19452256 | Msa1280730:three_prime_UTR | 60.0% | |
ACGCAATGCCGCCAAAGCGA+GGG | - | chr8_3:19452238-19452257 | Msa1280730:three_prime_UTR | 60.0% | |
GCGAAGGAAACCCCTCGCTT+TGG | + | chr8_3:19452252-19452271 | None:intergenic | 60.0% | |
! | CTACGGTCGACTCTAGCCAC+AGG | - | chr8_3:19453911-19453930 | Msa1280730:CDS | 60.0% |
TGCCATGGGTCGTGCAATGG+TGG | - | chr8_3:19453984-19454003 | Msa1280730:CDS | 60.0% | |
CCGGTACAAGTATCTGGCGG+AGG | + | chr8_3:19454256-19454275 | None:intergenic | 60.0% | |
GGTGGAAGAATCAGGGGGGT+TGG | - | chr8_3:19454296-19454315 | Msa1280730:CDS | 60.0% | |
!! | GGGCCAGTTTGTTGTCCCGT+TGG | - | chr8_3:19454386-19454405 | Msa1280730:CDS | 60.0% |
CGCCCAACGGGACAACAAAC+TGG | + | chr8_3:19454392-19454411 | None:intergenic | 60.0% | |
GACTGCAGCCAGCTGCCAAA+TGG | - | chr8_3:19456412-19456431 | Msa1280730:intron | 60.0% | |
GCCCTACACGACAAGTCCGA+AGG | - | chr8_3:19456973-19456992 | Msa1280730:intron | 60.0% | |
CTGCCGCAATACAGGGCAGT+AGG | + | chr8_3:19458852-19458871 | None:intergenic | 60.0% | |
CGCAATGCCGCCAAAGCGAG+GGG | - | chr8_3:19452239-19452258 | Msa1280730:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 19452229 | 19460095 | 19452229 | ID=Msa1280730;Name=Msa1280730 |
chr8_3 | mRNA | 19452229 | 19460095 | 19452229 | ID=Msa1280730-mRNA-1;Parent=Msa1280730;Name=Msa1280730-mRNA-1;_AED=0.16;_eAED=0.19;_QI=0|0.66|0.6|1|0.66|0.7|10|414|634 |
chr8_3 | exon | 19452229 | 19452918 | 19452229 | ID=Msa1280730-mRNA-1:exon:7256;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19453027 | 19453614 | 19453027 | ID=Msa1280730-mRNA-1:exon:7255;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19453805 | 19454162 | 19453805 | ID=Msa1280730-mRNA-1:exon:7254;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19454247 | 19454347 | 19454247 | ID=Msa1280730-mRNA-1:exon:7253;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19454369 | 19454581 | 19454369 | ID=Msa1280730-mRNA-1:exon:7252;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19455329 | 19455375 | 19455329 | ID=Msa1280730-mRNA-1:exon:7251;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19455451 | 19455514 | 19455451 | ID=Msa1280730-mRNA-1:exon:7250;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19455634 | 19455756 | 19455634 | ID=Msa1280730-mRNA-1:exon:7249;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19458724 | 19458784 | 19458724 | ID=Msa1280730-mRNA-1:exon:7248;Parent=Msa1280730-mRNA-1 |
chr8_3 | exon | 19460022 | 19460095 | 19460022 | ID=Msa1280730-mRNA-1:exon:7247;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19460022 | 19460095 | 19460022 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19458724 | 19458784 | 19458724 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19455634 | 19455756 | 19455634 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19455451 | 19455514 | 19455451 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19455329 | 19455375 | 19455329 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19454369 | 19454581 | 19454369 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19454247 | 19454347 | 19454247 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19453805 | 19454162 | 19453805 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19453027 | 19453614 | 19453027 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | CDS | 19452643 | 19452918 | 19452643 | ID=Msa1280730-mRNA-1:cds;Parent=Msa1280730-mRNA-1 |
chr8_3 | three_prime_UTR | 19452229 | 19452642 | 19452229 | ID=Msa1280730-mRNA-1:three_prime_utr;Parent=Msa1280730-mRNA-1 |
Gene Sequence |
Protein sequence |