Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277600 | sp|O24457|ODPA3_ARATH | 82.323 | 396 | 58 | 5 | 43 | 427 | 34 | 428 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277600 | A0A072TYD9 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1277600 | 0.801783 | 7.649800e-49 | -8.615850e-47 |
| Msa0007160 | Msa1277600 | 0.803463 | 3.444191e-49 | -8.615850e-47 |
| Msa0009210 | Msa1277600 | 0.843823 | 1.105344e-58 | -8.615850e-47 |
| Msa0028410 | Msa1277600 | 0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0035090 | Msa1277600 | 0.839801 | 1.275091e-57 | -8.615850e-47 |
| Msa0050400 | Msa1277600 | 0.823311 | 1.483026e-53 | -8.615850e-47 |
| Msa0058970 | Msa1277600 | 0.818785 | 1.635037e-52 | -8.615850e-47 |
| Msa0077910 | Msa1277600 | 0.811850 | 5.696689e-51 | -8.615850e-47 |
| Msa0083570 | Msa1277600 | 0.840520 | 8.276138e-58 | -8.615850e-47 |
| Msa0092750 | Msa1277600 | 0.814411 | 1.561577e-51 | -8.615850e-47 |
| Msa0094060 | Msa1277600 | 0.814967 | 1.176238e-51 | -8.615850e-47 |
| Msa0110710 | Msa1277600 | 0.801650 | 8.147876e-49 | -8.615850e-47 |
| Msa0606230 | Msa1277600 | 0.801793 | 7.615143e-49 | -8.615850e-47 |
| Msa0619060 | Msa1277600 | 0.800341 | 1.507965e-48 | -8.615850e-47 |
| Msa0620090 | Msa1277600 | 0.823195 | 1.578578e-53 | -8.615850e-47 |
| Msa0620270 | Msa1277600 | 0.830651 | 2.605121e-55 | -8.615850e-47 |
| Msa0623760 | Msa1277600 | 0.813611 | 2.345414e-51 | -8.615850e-47 |
| Msa0640880 | Msa1277600 | 0.838848 | 2.253148e-57 | -8.615850e-47 |
| Msa0646710 | Msa1277600 | 0.809522 | 1.815501e-50 | -8.615850e-47 |
| Msa0647110 | Msa1277600 | 0.806665 | 7.366786e-50 | -8.615850e-47 |
| Msa0652360 | Msa1277600 | 0.820881 | 5.425646e-53 | -8.615850e-47 |
| Msa0653690 | Msa1277600 | 0.812463 | 4.187135e-51 | -8.615850e-47 |
| Msa0659960 | Msa1277600 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa0679270 | Msa1277600 | 0.828214 | 1.018296e-54 | -8.615850e-47 |
| Msa0685520 | Msa1277600 | 0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa0698860 | Msa1277600 | 0.803865 | 2.843174e-49 | -8.615850e-47 |
| Msa0698880 | Msa1277600 | 0.825278 | 5.114957e-54 | -8.615850e-47 |
| Msa0704570 | Msa1277600 | 0.804057 | 2.593385e-49 | -8.615850e-47 |
| Msa0704720 | Msa1277600 | 0.816701 | 4.828624e-52 | -8.615850e-47 |
| Msa0704750 | Msa1277600 | 0.800050 | 1.728641e-48 | -8.615850e-47 |
| Msa0706530 | Msa1277600 | 0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa0707610 | Msa1277600 | 0.825361 | 4.887914e-54 | -8.615850e-47 |
| Msa0712070 | Msa1277600 | 0.807806 | 4.223070e-50 | -8.615850e-47 |
| Msa0716670 | Msa1277600 | 0.806774 | 6.986051e-50 | -8.615850e-47 |
| Msa0720380 | Msa1277600 | 0.808060 | 3.728274e-50 | -8.615850e-47 |
| Msa0732100 | Msa1277600 | 0.806844 | 6.753147e-50 | -8.615850e-47 |
| Msa0733110 | Msa1277600 | 0.825764 | 3.924364e-54 | -8.615850e-47 |
| Msa0734430 | Msa1277600 | 0.802536 | 5.354393e-49 | -8.615850e-47 |
| Msa0746640 | Msa1277600 | 0.840773 | 7.103277e-58 | -8.615850e-47 |
| Msa0748890 | Msa1277600 | 0.824817 | 6.571433e-54 | -8.615850e-47 |
| Msa0773080 | Msa1277600 | 0.814236 | 1.707831e-51 | -8.615850e-47 |
| Msa0774090 | Msa1277600 | 0.836314 | 1.006278e-56 | -8.615850e-47 |
| Msa0794130 | Msa1277600 | 0.849360 | 3.399246e-60 | -8.615850e-47 |
| Msa0804930 | Msa1277600 | 0.808408 | 3.143744e-50 | -8.615850e-47 |
| Msa0811710 | Msa1277600 | 0.806115 | 9.621463e-50 | -8.615850e-47 |
| Msa0815340 | Msa1277600 | 0.808614 | 2.839707e-50 | -8.615850e-47 |
| Msa0821490 | Msa1277600 | 0.809743 | 1.627132e-50 | -8.615850e-47 |
| Msa0124070 | Msa1277600 | 0.805694 | 1.179875e-49 | -8.615850e-47 |
| Msa0125800 | Msa1277600 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0130120 | Msa1277600 | 0.839987 | 1.140187e-57 | -8.615850e-47 |
| Msa0146470 | Msa1277600 | 0.813029 | 3.148136e-51 | -8.615850e-47 |
| Msa0149070 | Msa1277600 | 0.829817 | 4.162047e-55 | -8.615850e-47 |
| Msa0155550 | Msa1277600 | 0.822822 | 1.928345e-53 | -8.615850e-47 |
| Msa0170440 | Msa1277600 | 0.812525 | 4.058325e-51 | -8.615850e-47 |
| Msa0175900 | Msa1277600 | 0.859742 | 3.351277e-63 | -8.615850e-47 |
| Msa0186750 | Msa1277600 | 0.809126 | 2.207784e-50 | -8.615850e-47 |
| Msa0190000 | Msa1277600 | 0.835779 | 1.375286e-56 | -8.615850e-47 |
| Msa0202630 | Msa1277600 | 0.808826 | 2.558910e-50 | -8.615850e-47 |
| Msa0224700 | Msa1277600 | 0.805984 | 1.025029e-49 | -8.615850e-47 |
| Msa1232010 | Msa1277600 | 0.813164 | 2.939518e-51 | -8.615850e-47 |
| Msa1232860 | Msa1277600 | 0.808192 | 3.495391e-50 | -8.615850e-47 |
| Msa1244770 | Msa1277600 | 0.809411 | 1.917184e-50 | -8.615850e-47 |
| Msa1262630 | Msa1277600 | 0.805081 | 1.585351e-49 | -8.615850e-47 |
| Msa1264670 | Msa1277600 | 0.818570 | 1.829446e-52 | -8.615850e-47 |
| Msa1274740 | Msa1277600 | 0.807200 | 5.678093e-50 | -8.615850e-47 |
| Msa1275290 | Msa1277600 | 0.817939 | 2.541901e-52 | -8.615850e-47 |
| Msa1277600 | Msa1278120 | 0.800162 | 1.640263e-48 | -8.615850e-47 |
| Msa1277600 | Msa1280730 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa1277600 | Msa1293530 | 0.817040 | 4.052606e-52 | -8.615850e-47 |
| Msa1277600 | Msa1302920 | 0.812378 | 4.368756e-51 | -8.615850e-47 |
| Msa1277600 | Msa1312730 | 0.820446 | 6.828525e-53 | -8.615850e-47 |
| Msa1277600 | Msa1313460 | 0.822791 | 1.960411e-53 | -8.615850e-47 |
| Msa1277600 | Msa1324940 | 0.828610 | 8.169812e-55 | -8.615850e-47 |
| Msa1277600 | Msa1334690 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
| Msa1277600 | Msa1336320 | 0.817524 | 3.153537e-52 | -8.615850e-47 |
| Msa1277600 | Msa1339250 | 0.803093 | 4.109479e-49 | -8.615850e-47 |
| Msa1277600 | Msa1347400 | 0.819857 | 9.316217e-53 | -8.615850e-47 |
| Msa1277600 | Msa1349720 | 0.814290 | 1.661138e-51 | -8.615850e-47 |
| Msa1277600 | Msa1351560 | 0.812602 | 3.903413e-51 | -8.615850e-47 |
| Msa1277600 | Msa1352270 | 0.821826 | 3.284428e-53 | -8.615850e-47 |
| Msa1277600 | Msa1352820 | 0.819571 | 1.083292e-52 | -8.615850e-47 |
| Msa1277600 | Msa1359950 | 0.816485 | 5.398930e-52 | -8.615850e-47 |
| Msa1277600 | Msa1367810 | 0.840268 | 9.634127e-58 | -8.615850e-47 |
| Msa1277600 | Msa1369860 | 0.828648 | 8.000092e-55 | -8.615850e-47 |
| Msa1277600 | Msa1398840 | 0.801576 | 8.437341e-49 | -8.615850e-47 |
| Msa1277600 | Msa1424240 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa1277600 | Msa1426870 | 0.801280 | 9.701702e-49 | -8.615850e-47 |
| Msa1277600 | Msa1427020 | 0.821120 | 4.780368e-53 | -8.615850e-47 |
| Msa1277600 | Msa1429390 | 0.815263 | 1.011188e-51 | -8.615850e-47 |
| Msa1277600 | Msa1430940 | 0.805396 | 1.362040e-49 | -8.615850e-47 |
| Msa1277600 | Msa1437690 | 0.805835 | 1.101929e-49 | -8.615850e-47 |
| Msa1277600 | Msa1439800 | 0.805518 | 1.284212e-49 | -8.615850e-47 |
| Msa1277600 | Msa1444750 | 0.817068 | 3.994403e-52 | -8.615850e-47 |
| Msa1277600 | Msa1450030 | 0.816598 | 5.092358e-52 | -8.615850e-47 |
| Msa1277600 | Msa1455000 | 0.800183 | 1.624184e-48 | -8.615850e-47 |
| Msa0369770 | Msa1277600 | 0.811758 | 5.965331e-51 | -8.615850e-47 |
| Msa0377460 | Msa1277600 | 0.828857 | 7.118425e-55 | -8.615850e-47 |
| Msa0392410 | Msa1277600 | 0.803573 | 3.267785e-49 | -8.615850e-47 |
| Msa0392450 | Msa1277600 | 0.827101 | 1.883852e-54 | -8.615850e-47 |
| Msa0392480 | Msa1277600 | 0.820017 | 8.566767e-53 | -8.615850e-47 |
| Msa0398990 | Msa1277600 | 0.827229 | 1.755950e-54 | -8.615850e-47 |
| Msa0399180 | Msa1277600 | 0.832203 | 1.080575e-55 | -8.615850e-47 |
| Msa0400890 | Msa1277600 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0404840 | Msa1277600 | 0.820082 | 8.277344e-53 | -8.615850e-47 |
| Msa0420080 | Msa1277600 | 0.807997 | 3.845433e-50 | -8.615850e-47 |
| Msa0421790 | Msa1277600 | 0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0426860 | Msa1277600 | 0.803325 | 3.679547e-49 | -8.615850e-47 |
| Msa0426890 | Msa1277600 | 0.804764 | 1.846773e-49 | -8.615850e-47 |
| Msa0436310 | Msa1277600 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0439780 | Msa1277600 | 0.841879 | 3.634424e-58 | -8.615850e-47 |
| Msa0444340 | Msa1277600 | 0.840416 | 8.811198e-58 | -8.615850e-47 |
| Msa0450780 | Msa1277600 | 0.816339 | 5.819359e-52 | -8.615850e-47 |
| Msa0450860 | Msa1277600 | 0.834273 | 3.296889e-56 | -8.615850e-47 |
| Msa0457750 | Msa1277600 | 0.831908 | 1.278338e-55 | -8.615850e-47 |
| Msa0463810 | Msa1277600 | 0.820618 | 6.236302e-53 | -8.615850e-47 |
| Msa0463980 | Msa1277600 | 0.822857 | 1.892219e-53 | -8.615850e-47 |
| Msa0467890 | Msa1277600 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa0467970 | Msa1277600 | 0.814914 | 1.208606e-51 | -8.615850e-47 |
| Msa0468610 | Msa1277600 | 0.805224 | 1.480258e-49 | -8.615850e-47 |
| Msa0473320 | Msa1277600 | 0.803353 | 3.629501e-49 | -8.615850e-47 |
| Msa0982720 | Msa1277600 | 0.815743 | 7.907341e-52 | -8.615850e-47 |
| Msa1008760 | Msa1277600 | 0.810539 | 1.096372e-50 | -8.615850e-47 |
| Msa1022310 | Msa1277600 | 0.818096 | 2.343099e-52 | -8.615850e-47 |
| Msa1030820 | Msa1277600 | 0.809668 | 1.688760e-50 | -8.615850e-47 |
| Msa1035090 | Msa1277600 | 0.813246 | 2.820795e-51 | -8.615850e-47 |
| Msa1045440 | Msa1277600 | 0.823521 | 1.324478e-53 | -8.615850e-47 |
| Msa1056520 | Msa1277600 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa1061310 | Msa1277600 | 0.821716 | 3.482673e-53 | -8.615850e-47 |
| Msa1075120 | Msa1277600 | 0.816772 | 4.655102e-52 | -8.615850e-47 |
| Msa1090230 | Msa1277600 | 0.813240 | 2.828646e-51 | -8.615850e-47 |
| Msa0247310 | Msa1277600 | 0.825061 | 5.755279e-54 | -8.615850e-47 |
| Msa0251110 | Msa1277600 | 0.808235 | 3.421638e-50 | -8.615850e-47 |
| Msa0253410 | Msa1277600 | 0.816515 | 5.315296e-52 | -8.615850e-47 |
| Msa0263430 | Msa1277600 | 0.838084 | 3.546727e-57 | -8.615850e-47 |
| Msa0265780 | Msa1277600 | 0.812911 | 3.341120e-51 | -8.615850e-47 |
| Msa0268160 | Msa1277600 | 0.805966 | 1.034361e-49 | -8.615850e-47 |
| Msa0284260 | Msa1277600 | 0.830460 | 2.900542e-55 | -8.615850e-47 |
| Msa0290040 | Msa1277600 | 0.813526 | 2.447964e-51 | -8.615850e-47 |
| Msa0296100 | Msa1277600 | 0.823751 | 1.170384e-53 | -8.615850e-47 |
| Msa0301020 | Msa1277600 | 0.835330 | 1.786405e-56 | -8.615850e-47 |
| Msa0301800 | Msa1277600 | 0.826531 | 2.577475e-54 | -8.615850e-47 |
| Msa0303780 | Msa1277600 | 0.831303 | 1.801600e-55 | -8.615850e-47 |
| Msa0304870 | Msa1277600 | 0.818128 | 2.303775e-52 | -8.615850e-47 |
| Msa0307460 | Msa1277600 | 0.819624 | 1.053404e-52 | -8.615850e-47 |
| Msa0307490 | Msa1277600 | 0.807910 | 4.012365e-50 | -8.615850e-47 |
| Msa0307750 | Msa1277600 | 0.812944 | 3.285100e-51 | -8.615850e-47 |
| Msa0322480 | Msa1277600 | 0.812920 | 3.325590e-51 | -8.615850e-47 |
| Msa0341260 | Msa1277600 | 0.820661 | 6.096637e-53 | -8.615850e-47 |
| Msa0343920 | Msa1277600 | 0.836986 | 6.783608e-57 | -8.615850e-47 |
| Msa0353890 | Msa1277600 | 0.809662 | 1.693717e-50 | -8.615850e-47 |
| Msa0358230 | Msa1277600 | 0.803338 | 3.655955e-49 | -8.615850e-47 |
| Msa1138840 | Msa1277600 | 0.830945 | 2.206170e-55 | -8.615850e-47 |
| Msa1149960 | Msa1277600 | 0.818599 | 1.802577e-52 | -8.615850e-47 |
| Msa1150170 | Msa1277600 | 0.814043 | 1.883744e-51 | -8.615850e-47 |
| Msa1157680 | Msa1277600 | 0.828177 | 1.039247e-54 | -8.615850e-47 |
| Msa1166520 | Msa1277600 | 0.803856 | 2.854953e-49 | -8.615850e-47 |
| Msa1173410 | Msa1277600 | 0.805452 | 1.326089e-49 | -8.615850e-47 |
| Msa1183760 | Msa1277600 | 0.809288 | 2.037701e-50 | -8.615850e-47 |
| Msa1189630 | Msa1277600 | 0.849940 | 2.341074e-60 | -8.615850e-47 |
| Msa1198420 | Msa1277600 | 0.815390 | 9.474682e-52 | -8.615850e-47 |
| Msa1202730 | Msa1277600 | 0.819868 | 9.265868e-53 | -8.615850e-47 |
| Msa1208510 | Msa1277600 | 0.829827 | 4.139757e-55 | -8.615850e-47 |
| Msa1208750 | Msa1277600 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
| Msa0486200 | Msa1277600 | 0.807623 | 4.617716e-50 | -8.615850e-47 |
| Msa0487560 | Msa1277600 | 0.812354 | 4.422055e-51 | -8.615850e-47 |
| Msa0487620 | Msa1277600 | 0.813721 | 2.217349e-51 | -8.615850e-47 |
| Msa0493550 | Msa1277600 | 0.809973 | 1.451778e-50 | -8.615850e-47 |
| Msa0504740 | Msa1277600 | 0.804866 | 1.758762e-49 | -8.615850e-47 |
| Msa0509530 | Msa1277600 | 0.813762 | 2.172561e-51 | -8.615850e-47 |
| Msa0510230 | Msa1277600 | 0.810093 | 1.368405e-50 | -8.615850e-47 |
| Msa0514490 | Msa1277600 | 0.808065 | 3.719078e-50 | -8.615850e-47 |
| Msa0517400 | Msa1277600 | 0.826986 | 2.007387e-54 | -8.615850e-47 |
| Msa0524020 | Msa1277600 | 0.808559 | 2.918715e-50 | -8.615850e-47 |
| Msa0544780 | Msa1277600 | 0.836600 | 8.509693e-57 | -8.615850e-47 |
| Msa0545350 | Msa1277600 | 0.806998 | 6.263634e-50 | -8.615850e-47 |
| Msa0550840 | Msa1277600 | 0.824627 | 7.285680e-54 | -8.615850e-47 |
| Msa0562040 | Msa1277600 | 0.828618 | 8.135530e-55 | -8.615850e-47 |
| Msa0571070 | Msa1277600 | 0.806533 | 7.855407e-50 | -8.615850e-47 |
| Msa0577110 | Msa1277600 | 0.807073 | 6.039077e-50 | -8.615850e-47 |
| Msa0577140 | Msa1277600 | 0.802212 | 6.243570e-49 | -8.615850e-47 |
| Msa0598080 | Msa1277600 | 0.818642 | 1.762118e-52 | -8.615850e-47 |
| Msa0600390 | Msa1277600 | 0.813969 | 1.955099e-51 | -8.615850e-47 |
| Msa0602670 | Msa1277600 | 0.830668 | 2.579407e-55 | -8.615850e-47 |
| Msa0851870 | Msa1277600 | 0.837933 | 3.880714e-57 | -8.615850e-47 |
| Msa0855490 | Msa1277600 | 0.819287 | 1.257288e-52 | -8.615850e-47 |
| Msa0900320 | Msa1277600 | 0.828456 | 8.902215e-55 | -8.615850e-47 |
| Msa0905200 | Msa1277600 | 0.805390 | 1.366378e-49 | -8.615850e-47 |
| Msa0910650 | Msa1277600 | 0.830645 | 2.613272e-55 | -8.615850e-47 |
| Msa0930160 | Msa1277600 | 0.804995 | 1.653112e-49 | -8.615850e-47 |
| Msa0959970 | Msa1277600 | 0.826068 | 3.322653e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277600 | MtrunA17_Chr8g0345911 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 877 |
| Msa1277600 | MtrunA17_Chr5g0414991 | 39.650 | 343 | 183 | 6 | 81 | 416 | 64 | 389 | 2.20e-79 | 250 |
| Msa1277600 | MtrunA17_Chr8g0364201 | 38.068 | 352 | 194 | 6 | 72 | 416 | 55 | 389 | 2.36e-78 | 248 |
| Msa1277600 | MtrunA17_Chr7g0276281 | 90.805 | 87 | 8 | 0 | 256 | 342 | 15 | 101 | 1.02e-52 | 171 |
| Msa1277600 | MtrunA17_Chr3g0125611 | 26.866 | 335 | 231 | 4 | 69 | 401 | 113 | 435 | 5.54e-34 | 132 |
| Msa1277600 | MtrunA17_Chr3g0130311 | 25.826 | 333 | 237 | 3 | 72 | 402 | 97 | 421 | 1.78e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277600 | AT1G01090.1 | 82.323 | 396 | 58 | 5 | 43 | 427 | 34 | 428 | 0.0 | 665 |
| Msa1277600 | AT1G59900.1 | 39.650 | 343 | 180 | 7 | 78 | 410 | 55 | 380 | 1.51e-79 | 251 |
| Msa1277600 | AT1G59900.2 | 39.583 | 336 | 179 | 6 | 78 | 406 | 55 | 373 | 7.57e-79 | 249 |
| Msa1277600 | AT1G24180.1 | 35.917 | 387 | 219 | 7 | 35 | 404 | 3 | 377 | 1.73e-76 | 243 |
| Msa1277600 | AT5G09300.2 | 26.786 | 336 | 232 | 5 | 68 | 401 | 45 | 368 | 4.55e-34 | 131 |
| Msa1277600 | AT5G09300.1 | 26.786 | 336 | 232 | 5 | 68 | 401 | 116 | 439 | 6.80e-34 | 132 |
| Msa1277600 | AT1G21400.4 | 25.305 | 328 | 229 | 4 | 77 | 399 | 33 | 349 | 3.25e-29 | 117 |
| Msa1277600 | AT1G21400.2 | 25.305 | 328 | 229 | 4 | 77 | 399 | 33 | 349 | 3.25e-29 | 117 |
| Msa1277600 | AT1G21400.3 | 25.305 | 328 | 229 | 4 | 77 | 399 | 50 | 366 | 5.19e-29 | 117 |
| Msa1277600 | AT1G21400.5 | 25.373 | 335 | 233 | 5 | 77 | 405 | 177 | 500 | 5.94e-29 | 119 |
| Msa1277600 | AT1G21400.1 | 25.305 | 328 | 229 | 4 | 77 | 399 | 125 | 441 | 6.63e-29 | 118 |
| Msa1277600 | AT5G09300.3 | 27.419 | 248 | 172 | 2 | 68 | 315 | 116 | 355 | 8.41e-25 | 105 |
| Msa1277600 | AT5G09300.4 | 27.604 | 192 | 131 | 2 | 68 | 259 | 116 | 299 | 5.46e-18 | 85.1 |
| Msa1277600 | AT5G34780.1 | 28.729 | 181 | 127 | 1 | 221 | 399 | 31 | 211 | 1.01e-15 | 78.6 |
| Msa1277600 | AT1G21400.6 | 25.683 | 183 | 128 | 2 | 77 | 259 | 177 | 351 | 2.39e-13 | 71.6 |
Find 132 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGGGATGTCACATCTT+AGG | 0.211388 | 8_3:+13304594 | Msa1277600:CDS |
| AAGAAGAGAGTGTGAGAATT+TGG | 0.214784 | 8_3:-13302423 | None:intergenic |
| AGATCCTCAGATATGGAAAA+AGG | 0.233801 | 8_3:+13304625 | Msa1277600:CDS |
| TCTTCAACAAACCTCCAATT+TGG | 0.238999 | 8_3:+13302610 | Msa1277600:CDS |
| ATCAGCACACTTTGTTCTTT+AGG | 0.275262 | 8_3:+13306425 | Msa1277600:three_prime_UTR |
| CTTTATGAAGACATGGTATT+AGG | 0.283149 | 8_3:+13304074 | Msa1277600:CDS |
| TTCGCCGATCCAAAAGGTTT+TGG | 0.285944 | 8_3:+13306236 | Msa1277600:CDS |
| GGTCCAATTCCAAAACCTTT+TGG | 0.286792 | 8_3:-13306245 | None:intergenic |
| TGTTTAATTGTCTATGACTT+TGG | 0.287530 | 8_3:-13302181 | None:intergenic |
| AGAAATTAATGTAAGGAATA+GGG | 0.306421 | 8_3:-13302275 | None:intergenic |
| ACGATAAAGGGTTACCAAAT+TGG | 0.309802 | 8_3:-13302624 | None:intergenic |
| GACAGGATGTTGCCGAGGTC+AGG | 0.320528 | 8_3:+13304310 | Msa1277600:CDS |
| CAGAAATTAATGTAAGGAAT+AGG | 0.335894 | 8_3:-13302276 | None:intergenic |
| ATGTGCTGAGATGTATTATA+GGG | 0.340546 | 8_3:+13304115 | Msa1277600:CDS |
| ATGTGGTTATGAAAGGAAAA+TGG | 0.342935 | 8_3:-13302337 | None:intergenic |
| ATACTTGTGCCATGAGAATA+TGG | 0.347178 | 8_3:+13306589 | Msa1277600:three_prime_UTR |
| TGTTCTTTAGGTTGGAAGTT+TGG | 0.351584 | 8_3:+13306437 | Msa1277600:three_prime_UTR |
| AGCTGGCTGCGAAGTGGTGC+AGG | 0.359831 | 8_3:-13306200 | None:intergenic |
| TGCGAGACTTACAGATTTAG+AGG | 0.368784 | 8_3:+13304767 | Msa1277600:CDS |
| GACAATCTTCAAAGTTTAAG+TGG | 0.384770 | 8_3:+13306508 | Msa1277600:three_prime_UTR |
| CTTGGAGTTGAAGAATTGAT+AGG | 0.391470 | 8_3:-13302452 | None:intergenic |
| AATGTGCTGAGATGTATTAT+AGG | 0.392055 | 8_3:+13304114 | Msa1277600:CDS |
| GAAAGAGAGTGGTTTATCAT+TGG | 0.392879 | 8_3:-13302477 | None:intergenic |
| CAGATTTAGAGGACATTCAT+TGG | 0.395237 | 8_3:+13304778 | Msa1277600:CDS |
| ATGTTCACGCGTTGAGTAAA+GGG | 0.396851 | 8_3:+13304246 | Msa1277600:CDS |
| CAACTTCAGATCCTCAGATA+TGG | 0.400886 | 8_3:+13304618 | Msa1277600:CDS |
| CCTCAAATACTTGATGAATC+CGG | 0.405964 | 8_3:-13304189 | None:intergenic |
| GAAAACAATTTGTGGGCCAT+TGG | 0.409242 | 8_3:+13304578 | Msa1277600:CDS |
| AGTGGTTTATCATTGGATCT+TGG | 0.422237 | 8_3:-13302470 | None:intergenic |
| CCAGGGTTACGAAGCTCATC+AGG | 0.424279 | 8_3:-13304806 | None:intergenic |
| CTTGCAGCTTATTACTAAAG+AGG | 0.437176 | 8_3:+13304040 | Msa1277600:intron |
| CATTGGGATGTCACATCTTA+GGG | 0.437954 | 8_3:+13304595 | Msa1277600:CDS |
| CTAATACCATGTCTTCATAA+AGG | 0.442808 | 8_3:-13304073 | None:intergenic |
| TTATTATTGTTTGTGAACTT+AGG | 0.449752 | 8_3:+13306475 | Msa1277600:three_prime_UTR |
| GAAATTACCAATTGTGTTTG+TGG | 0.451296 | 8_3:+13304553 | Msa1277600:CDS |
| AGCCACTGAACAAGAATTGA+AGG | 0.452201 | 8_3:+13306118 | Msa1277600:CDS |
| GTTTAAACATGGCTGCTTTG+TGG | 0.458037 | 8_3:+13304531 | Msa1277600:CDS |
| GGACAAGAAGCTGTTTCAAC+CGG | 0.459532 | 8_3:+13304170 | Msa1277600:CDS |
| GAATAGGGGCGGAGAATACA+AGG | 0.459882 | 8_3:-13302260 | None:intergenic |
| CATGTTCACGCGTTGAGTAA+AGG | 0.460084 | 8_3:+13304245 | Msa1277600:CDS |
| CCGGATTCATCAAGTATTTG+AGG | 0.461143 | 8_3:+13304189 | Msa1277600:CDS |
| GCACACTTTGTTCTTTAGGT+TGG | 0.462719 | 8_3:+13306429 | Msa1277600:three_prime_UTR |
| TTTAAGAATGTGGTTATGAA+AGG | 0.463690 | 8_3:-13302344 | None:intergenic |
| AGGAGAAGGACCAACTTTAG+TGG | 0.464470 | 8_3:+13304742 | Msa1277600:CDS |
| CCAAGAAAAGAGGAAGAAGA+AGG | 0.474320 | 8_3:-13302524 | None:intergenic |
| TGCCTTCAATTCTTGTTCAG+TGG | 0.476765 | 8_3:-13306120 | None:intergenic |
| TGAAGAAGAACAGCAGCAAC+AGG | 0.481861 | 8_3:-13302593 | None:intergenic |
| TTTCTATTTGGCAGCTGAGA+AGG | 0.484309 | 8_3:+13306034 | Msa1277600:intron |
| GGTCCAGCGTTCGGAATGCC+AGG | 0.486695 | 8_3:+13304647 | Msa1277600:CDS |
| AATGCAGCACCGGTGGCCAC+TGG | 0.488288 | 8_3:-13304404 | None:intergenic |
| TGGCGAAGGAGGCAATTGAC+AGG | 0.490694 | 8_3:+13304711 | Msa1277600:CDS |
| CATGAGAATATGGAGTAGAT+TGG | 0.491612 | 8_3:+13306599 | Msa1277600:three_prime_UTR |
| TTGTGGTGGAAAACAATTTG+TGG | 0.493463 | 8_3:+13304570 | Msa1277600:CDS |
| ATGAATCAGAAATTAATGTA+AGG | 0.494613 | 8_3:-13302282 | None:intergenic |
| CTGAGTAGATCCAAGAAAAG+AGG | 0.497050 | 8_3:-13302534 | None:intergenic |
| GCAGTGCCTTCAGTAAACTT+TGG | 0.498498 | 8_3:-13306293 | None:intergenic |
| CAGCTTATTACTAAAGAGGA+AGG | 0.500564 | 8_3:+13304044 | Msa1277600:intron |
| GAACTCTTCGGTAAGGCGAC+AGG | 0.504468 | 8_3:+13304293 | Msa1277600:CDS |
| AAAACAATTTGTGGGCCATT+GGG | 0.506998 | 8_3:+13304579 | Msa1277600:CDS |
| ATGCCAGGTGTTCATGTCGA+TGG | 0.515674 | 8_3:+13304662 | Msa1277600:CDS |
| ACAGGATGTTGCCGAGGTCA+GGG | 0.520072 | 8_3:+13304311 | Msa1277600:CDS |
| ATAAAGGGTTACCAAATTGG+AGG | 0.520677 | 8_3:-13302621 | None:intergenic |
| TATTTCTTCAATGCAGTGAT+GGG | 0.524511 | 8_3:-13306077 | None:intergenic |
| GGTCAGAGAAGTGGCGAAGG+AGG | 0.527619 | 8_3:+13304700 | Msa1277600:CDS |
| CTCAGCACATTTGTCTTCAA+AGG | 0.527792 | 8_3:-13304102 | None:intergenic |
| CGAAGACATTCTCTAGAAGC+TGG | 0.528527 | 8_3:-13306217 | None:intergenic |
| CAATCTACTCCATATTCTCA+TGG | 0.529432 | 8_3:-13306598 | None:intergenic |
| CAAAAGAGAGGTGCTGAACC+AGG | 0.529870 | 8_3:+13304439 | Msa1277600:CDS |
| GCTGAGAAGGAACACTATGC+TGG | 0.530450 | 8_3:+13306047 | Msa1277600:intron |
| GACAGGGCTAGAAGAGGAGA+AGG | 0.531725 | 8_3:+13304728 | Msa1277600:CDS |
| GTCTCGCATTCCACTAAAGT+TGG | 0.534804 | 8_3:-13304752 | None:intergenic |
| CTTCTTGTCCATTGTACAAG+TGG | 0.537841 | 8_3:-13304157 | None:intergenic |
| AATGTCTTCGCCGATCCAAA+AGG | 0.541225 | 8_3:+13306230 | Msa1277600:CDS |
| GAAATTAATGTAAGGAATAG+GGG | 0.547070 | 8_3:-13302274 | None:intergenic |
| GAAGGAACACTATGCTGGTA+GGG | 0.549726 | 8_3:+13306052 | Msa1277600:CDS |
| AGATCAGAAGAGAAAGAGAG+TGG | 0.552050 | 8_3:-13302488 | None:intergenic |
| AGAAGGAACACTATGCTGGT+AGG | 0.556011 | 8_3:+13306051 | Msa1277600:CDS |
| TTGGAATTGGACCGGATGGA+AGG | 0.556302 | 8_3:+13306255 | Msa1277600:CDS |
| GGAAAATGGAACACAAAATG+AGG | 0.556966 | 8_3:-13302323 | None:intergenic |
| TGTGGTGGAAAACAATTTGT+GGG | 0.561089 | 8_3:+13304571 | Msa1277600:CDS |
| CTTTACTCAACGCGTGAACA+TGG | 0.563353 | 8_3:-13304244 | None:intergenic |
| AGTCATAGACAATTAAACAT+AGG | 0.564621 | 8_3:+13302185 | Msa1277600:five_prime_UTR |
| GAAGGTCAGAGAAGTGGCGA+AGG | 0.564863 | 8_3:+13304697 | Msa1277600:CDS |
| CTTCATGGAAAATGCAGCAC+CGG | 0.565146 | 8_3:-13304414 | None:intergenic |
| GAAGGAATTCCAGTGGCCAC+CGG | 0.565196 | 8_3:+13304395 | Msa1277600:CDS |
| ATTACCAATTGTGTTTGTGG+TGG | 0.566402 | 8_3:+13304556 | Msa1277600:CDS |
| CAGCAACAGGTGGTGATGAA+CGG | 0.566780 | 8_3:-13302580 | None:intergenic |
| CACTCATCACTTCTCGAGAA+GGG | 0.567182 | 8_3:-13304271 | None:intergenic |
| GCTGGCTGCGAAGTGGTGCA+GGG | 0.575928 | 8_3:-13306199 | None:intergenic |
| CAAGAAAAGAGGAAGAAGAA+GGG | 0.576220 | 8_3:-13302523 | None:intergenic |
| GAATACAAGGGAGTGAGACA+TGG | 0.576570 | 8_3:-13302247 | None:intergenic |
| TGCCAGGTGTTCATGTCGAT+GGG | 0.577359 | 8_3:+13304663 | Msa1277600:CDS |
| GATGAGTGAACTCTTCGGTA+AGG | 0.582580 | 8_3:+13304286 | Msa1277600:CDS |
| TCAAAAGAACACAACGTGCT+CGG | 0.582628 | 8_3:+13304353 | Msa1277600:CDS |
| TCGCATCTATACCTTCCATC+CGG | 0.583539 | 8_3:-13306266 | None:intergenic |
| ATGAAGACATGGTATTAGGA+AGG | 0.584772 | 8_3:+13304078 | Msa1277600:CDS |
| AATTAAACATAGGCATAGGC+AGG | 0.586966 | 8_3:+13302195 | Msa1277600:five_prime_UTR |
| CCTGATGAGCTTCGTAACCC+TGG | 0.587699 | 8_3:+13304806 | Msa1277600:CDS |
| TCACTCATCACTTCTCGAGA+AGG | 0.588915 | 8_3:-13304272 | None:intergenic |
| TCACGTTATCAGAATCAGCC+TGG | 0.590806 | 8_3:-13304457 | None:intergenic |
| AGCTTATTACTAAAGAGGAA+GGG | 0.594519 | 8_3:+13304045 | Msa1277600:intron |
| ATATTTCTTCAATGCAGTGA+TGG | 0.596499 | 8_3:-13306078 | None:intergenic |
| ATCCCATCGACATGAACACC+TGG | 0.596614 | 8_3:-13304665 | None:intergenic |
| GCAATTGACAGGGCTAGAAG+AGG | 0.598579 | 8_3:+13304722 | Msa1277600:CDS |
| GCATTGAACCACCCTGACCT+CGG | 0.598594 | 8_3:-13304322 | None:intergenic |
| AGGTGTTCATGTCGATGGGA+TGG | 0.599642 | 8_3:+13304667 | Msa1277600:CDS |
| AGACAATTAAACATAGGCAT+AGG | 0.601864 | 8_3:+13302191 | Msa1277600:five_prime_UTR |
| TGATTCTGATAACGTGACAT+TGG | 0.607520 | 8_3:+13304463 | Msa1277600:CDS |
| GTTCTTTGAGTGTTTAAACA+TGG | 0.607743 | 8_3:+13304520 | Msa1277600:CDS |
| TTCCATGAAGTACAAAAGAG+AGG | 0.611043 | 8_3:+13304427 | Msa1277600:CDS |
| GGAGATGGAACTTGTAACAA+TGG | 0.616526 | 8_3:+13304494 | Msa1277600:CDS |
| CATGGAAAATGCAGCACCGG+TGG | 0.619965 | 8_3:-13304411 | None:intergenic |
| CCTAAGATGTGACATCCCAA+TGG | 0.632354 | 8_3:-13304594 | None:intergenic |
| GTTAGTCCTTTATGAAGACA+TGG | 0.636628 | 8_3:+13304067 | Msa1277600:CDS |
| TCTAGAAGCTGGCTGCGAAG+TGG | 0.637368 | 8_3:-13306206 | None:intergenic |
| GGCGAAGGAGGCAATTGACA+GGG | 0.640812 | 8_3:+13304712 | Msa1277600:CDS |
| GAGGATCCAAAGTTTACTGA+AGG | 0.642572 | 8_3:+13306287 | Msa1277600:CDS |
| TGTGCTGAGATGTATTATAG+GGG | 0.642715 | 8_3:+13304116 | Msa1277600:CDS |
| GTGCTGAGATGTATTATAGG+GGG | 0.644449 | 8_3:+13304117 | Msa1277600:CDS |
| GAAGTGATGAGTGAACTCTT+CGG | 0.646509 | 8_3:+13304281 | Msa1277600:CDS |
| AATAGACAAGAAAATTGATG+AGG | 0.647152 | 8_3:+13306142 | Msa1277600:CDS |
| GGATGGAAGGTATAGATGCG+AGG | 0.649737 | 8_3:+13306268 | Msa1277600:CDS |
| AAGGCGACAGGATGTTGCCG+AGG | 0.666759 | 8_3:+13304305 | Msa1277600:CDS |
| TGTTCACGCGTTGAGTAAAG+GGG | 0.668617 | 8_3:+13304247 | Msa1277600:CDS |
| CATCGGTGAAGGAATTCCAG+TGG | 0.679391 | 8_3:+13304388 | Msa1277600:CDS |
| AATAGGGGCGGAGAATACAA+GGG | 0.685428 | 8_3:-13302259 | None:intergenic |
| AGAAGAACAGCAGCAACAGG+TGG | 0.688242 | 8_3:-13302590 | None:intergenic |
| CGAAATCAACAGCATCCTCG+AGG | 0.691090 | 8_3:-13306166 | None:intergenic |
| GAAAATTGATGAGGTCCTCG+AGG | 0.693520 | 8_3:+13306151 | Msa1277600:CDS |
| AAAGAACACAACGTGCTCGG+TGG | 0.701061 | 8_3:+13304356 | Msa1277600:CDS |
| ATTAATGTAAGGAATAGGGG+CGG | 0.708271 | 8_3:-13302271 | None:intergenic |
| GGATGTTGCCGAGGTCAGGG+TGG | 0.715163 | 8_3:+13304314 | Msa1277600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTCTAATTTGAAAT+TGG | + | chr8_3:13303556-13303575 | Msa1277600:intron | 10.0% |
| !!! | AACTTTTAAAGTTATAATTT+CGG | + | chr8_3:13305532-13305551 | Msa1277600:intron | 10.0% |
| !!! | AACTTTTAAAGTTATAATTT+CGG | + | chr8_3:13305532-13305551 | Msa1277600:intron | 10.0% |
| !!! | GTATTTTTTTTTTAAGAATG+TGG | - | chr8_3:13302357-13302376 | None:intergenic | 15.0% |
| !! | AATGAAAAAATAACGATAAA+GGG | - | chr8_3:13302639-13302658 | None:intergenic | 15.0% |
| !! | AAATGAAAAAATAACGATAA+AGG | - | chr8_3:13302640-13302659 | None:intergenic | 15.0% |
| !!! | AATATTAATGTTTTTGTTGT+TGG | + | chr8_3:13303241-13303260 | Msa1277600:intron | 15.0% |
| !!! | ATATTAATGTTTTTGTTGTT+GGG | + | chr8_3:13303242-13303261 | Msa1277600:intron | 15.0% |
| !! | ATTAGTGATTTATGATTTAT+GGG | + | chr8_3:13303308-13303327 | Msa1277600:intron | 15.0% |
| !!! | ATAATTGATTTTGACATAAT+TGG | + | chr8_3:13303513-13303532 | Msa1277600:intron | 15.0% |
| !!! | TAATTTGAAATTGGAAATTT+TGG | + | chr8_3:13303565-13303584 | Msa1277600:intron | 15.0% |
| !!! | AATTTGAAATTGGAAATTTT+GGG | + | chr8_3:13303566-13303585 | Msa1277600:intron | 15.0% |
| !! | TTGAACAAAAAAAAAAATTG+AGG | - | chr8_3:13303617-13303636 | None:intergenic | 15.0% |
| !! | GTATGATTAATGAAAATAAA+TGG | - | chr8_3:13303709-13303728 | None:intergenic | 15.0% |
| !! | TAAACAGTAATTCATTTAAT+CGG | - | chr8_3:13305076-13305095 | None:intergenic | 15.0% |
| !! | AAACATATGATTATTAACTT+AGG | - | chr8_3:13305671-13305690 | None:intergenic | 15.0% |
| !! | AGAAATTAATGTAAGGAATA+GGG | - | chr8_3:13302278-13302297 | None:intergenic | 20.0% |
| !! | ATGAATCAGAAATTAATGTA+AGG | - | chr8_3:13302285-13302304 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATACACATCTC+TGG | + | chr8_3:13302364-13302383 | Msa1277600:five_prime_UTR | 20.0% |
| !! | CATTAGTGATTTATGATTTA+TGG | + | chr8_3:13303307-13303326 | Msa1277600:intron | 20.0% |
| !! | TATTGTGTTATATGTTCAAT+TGG | + | chr8_3:13303338-13303357 | Msa1277600:intron | 20.0% |
| !!! | GGTTTTCAATTGTAAAAAAA+AGG | + | chr8_3:13303417-13303436 | Msa1277600:intron | 20.0% |
| !!! | TGTAAAAAAAAGGTCTTTTT+TGG | + | chr8_3:13303427-13303446 | Msa1277600:intron | 20.0% |
| !!! | AGGCTTAAAATCAATTTTAA+AGG | - | chr8_3:13303597-13303616 | None:intergenic | 20.0% |
| !!! | TGCAAATTGATTTTGTTTAA+AGG | - | chr8_3:13303644-13303663 | None:intergenic | 20.0% |
| !! | AAATAAAACAAAAACAAAGC+AGG | - | chr8_3:13303731-13303750 | None:intergenic | 20.0% |
| !!! | ATACTTTTTATGCTTTGAAA+AGG | + | chr8_3:13303978-13303997 | Msa1277600:intron | 20.0% |
| !! | AAACTGAATATAACTGTAAA+AGG | - | chr8_3:13304949-13304968 | None:intergenic | 20.0% |
| !! | AAACAGTAATTCATTTAATC+GGG | - | chr8_3:13305075-13305094 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCTCTAAGTATTT+TGG | + | chr8_3:13305202-13305221 | Msa1277600:intron | 20.0% |
| !!! | AATATATTTTGTAAAACCCT+TGG | - | chr8_3:13305269-13305288 | None:intergenic | 20.0% |
| !!! | AACGGTTTTTATAAAAATCT+TGG | - | chr8_3:13305944-13305963 | None:intergenic | 20.0% |
| !!! | GTTTTCATATAAGCTATAAA+CGG | - | chr8_3:13305962-13305981 | None:intergenic | 20.0% |
| !!! | TACATGATACATTTTCTATT+TGG | + | chr8_3:13306022-13306041 | Msa1277600:intron | 20.0% |
| !! | TTATTATTGTTTGTGAACTT+AGG | + | chr8_3:13306475-13306494 | Msa1277600:three_prime_UTR | 20.0% |
| ! | AGTCATAGACAATTAAACAT+AGG | + | chr8_3:13302185-13302204 | Msa1277600:five_prime_UTR | 25.0% |
| ! | GAAATTAATGTAAGGAATAG+GGG | - | chr8_3:13302277-13302296 | None:intergenic | 25.0% |
| ! | CAGAAATTAATGTAAGGAAT+AGG | - | chr8_3:13302279-13302298 | None:intergenic | 25.0% |
| ! | TTTAAGAATGTGGTTATGAA+AGG | - | chr8_3:13302347-13302366 | None:intergenic | 25.0% |
| ! | AAAGTTGAATTGAATCATGT+TGG | + | chr8_3:13302904-13302923 | Msa1277600:intron | 25.0% |
| ! | AAGTTGAATTGAATCATGTT+GGG | + | chr8_3:13302905-13302924 | Msa1277600:intron | 25.0% |
| ! | AAAGCTGAATTGAATCATTT+GGG | + | chr8_3:13303192-13303211 | Msa1277600:intron | 25.0% |
| !!! | TAGTTTTGTTATGCTTTCTA+AGG | + | chr8_3:13303386-13303405 | Msa1277600:intron | 25.0% |
| !!! | TTCCATTTTTAGTGTATGAT+TGG | + | chr8_3:13303451-13303470 | Msa1277600:intron | 25.0% |
| ! | ATCCAATCATACACTAAAAA+TGG | - | chr8_3:13303456-13303475 | None:intergenic | 25.0% |
| ! | AGAATGAAAATAAACAAAGC+AGG | - | chr8_3:13303672-13303691 | None:intergenic | 25.0% |
| ! | ATTAAAATAAATGCTCACCA+GGG | - | chr8_3:13304826-13304845 | None:intergenic | 25.0% |
| ! | TATTAAAATAAATGCTCACC+AGG | - | chr8_3:13304827-13304846 | None:intergenic | 25.0% |
| !! | TTGATGTTCTTTTGCATTTA+TGG | + | chr8_3:13304889-13304908 | Msa1277600:intron | 25.0% |
| !! | TGATGTTCTTTTGCATTTAT+GGG | + | chr8_3:13304890-13304909 | Msa1277600:intron | 25.0% |
| ! | AAAAGAAAATCGTATTTGCT+TGG | - | chr8_3:13305165-13305184 | None:intergenic | 25.0% |
| !! | TCTTTTACTTTATTGTTACC+AGG | + | chr8_3:13305179-13305198 | Msa1277600:intron | 25.0% |
| !!! | TTCTCTAAGTATTTTGGAAA+AGG | + | chr8_3:13305208-13305227 | Msa1277600:intron | 25.0% |
| ! | TCAATCTTCGAATACATATA+TGG | + | chr8_3:13305402-13305421 | Msa1277600:intron | 25.0% |
| ! | CAATCTTCGAATACATATAT+GGG | + | chr8_3:13305403-13305422 | Msa1277600:intron | 25.0% |
| ! | AAATGCTAAAATTACGCATT+TGG | - | chr8_3:13305457-13305476 | None:intergenic | 25.0% |
| !! | TATAGACTTTTATCTCATGA+GGG | + | chr8_3:13305765-13305784 | Msa1277600:intron | 25.0% |
| ! | AATAGACAAGAAAATTGATG+AGG | + | chr8_3:13306142-13306161 | Msa1277600:CDS | 25.0% |
| AGACAATTAAACATAGGCAT+AGG | + | chr8_3:13302191-13302210 | Msa1277600:five_prime_UTR | 30.0% | |
| ATGTGGTTATGAAAGGAAAA+TGG | - | chr8_3:13302340-13302359 | None:intergenic | 30.0% | |
| !! | TATATATTGATTCTCGCTTG+TGG | + | chr8_3:13302691-13302710 | Msa1277600:intron | 30.0% |
| !! | ATATATTGATTCTCGCTTGT+GGG | + | chr8_3:13302692-13302711 | Msa1277600:intron | 30.0% |
| !!! | TGTATGTTGATTCGCAATTT+TGG | + | chr8_3:13302991-13303010 | Msa1277600:intron | 30.0% |
| !!! | GTATGTTGATTCGCAATTTT+GGG | + | chr8_3:13302992-13303011 | Msa1277600:intron | 30.0% |
| ! | TCATTTTCTCAAATTTCACC+CGG | - | chr8_3:13303050-13303069 | None:intergenic | 30.0% |
| GAAAGCTGAATTGAATCATT+TGG | + | chr8_3:13303191-13303210 | Msa1277600:intron | 30.0% | |
| ! | TGAATTGAATCATTTGGGAT+TGG | + | chr8_3:13303197-13303216 | Msa1277600:intron | 30.0% |
| ! | GAATTGAATCATTTGGGATT+GGG | + | chr8_3:13303198-13303217 | Msa1277600:intron | 30.0% |
| ! | TGTATGATTGGATTCACTTT+TGG | + | chr8_3:13303463-13303482 | Msa1277600:intron | 30.0% |
| TTGTACTGTGTTGTAAATAG+CGG | + | chr8_3:13303756-13303775 | Msa1277600:intron | 30.0% | |
| ! | TGAAAAGGAGTTTTTCTCTT+AGG | + | chr8_3:13303993-13304012 | Msa1277600:intron | 30.0% |
| !!! | CTTAGGCTGTTATTTTTATC+TGG | + | chr8_3:13304010-13304029 | Msa1277600:intron | 30.0% |
| AGCTTATTACTAAAGAGGAA+GGG | + | chr8_3:13304045-13304064 | Msa1277600:intron | 30.0% | |
| CTAATACCATGTCTTCATAA+AGG | - | chr8_3:13304076-13304095 | None:intergenic | 30.0% | |
| CTTTATGAAGACATGGTATT+AGG | + | chr8_3:13304074-13304093 | Msa1277600:CDS | 30.0% | |
| AATGTGCTGAGATGTATTAT+AGG | + | chr8_3:13304114-13304133 | Msa1277600:CDS | 30.0% | |
| ATGTGCTGAGATGTATTATA+GGG | + | chr8_3:13304115-13304134 | Msa1277600:CDS | 30.0% | |
| TATTATAGGGGGAAAATGTT+TGG | + | chr8_3:13304128-13304147 | Msa1277600:CDS | 30.0% | |
| GTTCTTTGAGTGTTTAAACA+TGG | + | chr8_3:13304520-13304539 | Msa1277600:CDS | 30.0% | |
| GAAATTACCAATTGTGTTTG+TGG | + | chr8_3:13304553-13304572 | Msa1277600:CDS | 30.0% | |
| ! | GATGTTCTTTTGCATTTATG+GGG | + | chr8_3:13304891-13304910 | Msa1277600:intron | 30.0% |
| ! | ATGTTCTTTTGCATTTATGG+GGG | + | chr8_3:13304892-13304911 | Msa1277600:intron | 30.0% |
| ! | AAGTTATTCTAAGGAAGCTT+GGG | - | chr8_3:13305052-13305071 | None:intergenic | 30.0% |
| TTAATCGGGAAGTTATTCTA+AGG | - | chr8_3:13305061-13305080 | None:intergenic | 30.0% | |
| ATACTTAGAGAAGAAAAACC+TGG | - | chr8_3:13305200-13305219 | None:intergenic | 30.0% | |
| CTCATGAGATAAAAGTCTAT+AGG | - | chr8_3:13305766-13305785 | None:intergenic | 30.0% | |
| ! | CTATAGACTTTTATCTCATG+AGG | + | chr8_3:13305764-13305783 | Msa1277600:intron | 30.0% |
| ! | ATAGACTTTTATCTCATGAG+GGG | + | chr8_3:13305766-13305785 | Msa1277600:intron | 30.0% |
| TCAAATAAGACAATCCAAAC+AGG | - | chr8_3:13305818-13305837 | None:intergenic | 30.0% | |
| TATTTCTTCAATGCAGTGAT+GGG | - | chr8_3:13306080-13306099 | None:intergenic | 30.0% | |
| ATATTTCTTCAATGCAGTGA+TGG | - | chr8_3:13306081-13306100 | None:intergenic | 30.0% | |
| ! | AATTCCAAAACCTTTTGGAT+CGG | - | chr8_3:13306243-13306262 | None:intergenic | 30.0% |
| GACAATCTTCAAAGTTTAAG+TGG | + | chr8_3:13306508-13306527 | Msa1277600:three_prime_UTR | 30.0% | |
| AATTAAACATAGGCATAGGC+AGG | + | chr8_3:13302195-13302214 | Msa1277600:five_prime_UTR | 35.0% | |
| ! | AATCGTCTTGTGTGTTTTGT+GGG | - | chr8_3:13302223-13302242 | None:intergenic | 35.0% |
| ! | TAATCGTCTTGTGTGTTTTG+TGG | - | chr8_3:13302224-13302243 | None:intergenic | 35.0% |
| ATTAATGTAAGGAATAGGGG+CGG | - | chr8_3:13302274-13302293 | None:intergenic | 35.0% | |
| GGAAAATGGAACACAAAATG+AGG | - | chr8_3:13302326-13302345 | None:intergenic | 35.0% | |
| ! | AAGAAGAGAGTGTGAGAATT+TGG | - | chr8_3:13302426-13302445 | None:intergenic | 35.0% |
| CTTGGAGTTGAAGAATTGAT+AGG | - | chr8_3:13302455-13302474 | None:intergenic | 35.0% | |
| AGTGGTTTATCATTGGATCT+TGG | - | chr8_3:13302473-13302492 | None:intergenic | 35.0% | |
| GAAAGAGAGTGGTTTATCAT+TGG | - | chr8_3:13302480-13302499 | None:intergenic | 35.0% | |
| CAAGAAAAGAGGAAGAAGAA+GGG | - | chr8_3:13302526-13302545 | None:intergenic | 35.0% | |
| TCTTCAACAAACCTCCAATT+TGG | + | chr8_3:13302610-13302629 | Msa1277600:CDS | 35.0% | |
| ATAAAGGGTTACCAAATTGG+AGG | - | chr8_3:13302624-13302643 | None:intergenic | 35.0% | |
| ACGATAAAGGGTTACCAAAT+TGG | - | chr8_3:13302627-13302646 | None:intergenic | 35.0% | |
| TGAATTGAATCATGTTGGGT+TGG | + | chr8_3:13302909-13302928 | Msa1277600:intron | 35.0% | |
| GAATTGAATCATGTTGGGTT+GGG | + | chr8_3:13302910-13302929 | Msa1277600:intron | 35.0% | |
| ATATGTGTATGTGTCTGACA+TGG | - | chr8_3:13303098-13303117 | None:intergenic | 35.0% | |
| TGTCAGACACATACACATAT+TGG | + | chr8_3:13303098-13303117 | Msa1277600:intron | 35.0% | |
| CACATACACATATTGGACAT+CGG | + | chr8_3:13303105-13303124 | Msa1277600:intron | 35.0% | |
| !! | ATGCTTTCTAAGGTCTTCTT+TGG | + | chr8_3:13303396-13303415 | Msa1277600:intron | 35.0% |
| !! | ATGATTGGATTCACTTTTGG+AGG | + | chr8_3:13303466-13303485 | Msa1277600:intron | 35.0% |
| TTGTCAACTAGATGCTATAG+CGG | + | chr8_3:13303853-13303872 | Msa1277600:intron | 35.0% | |
| CTTGCAGCTTATTACTAAAG+AGG | + | chr8_3:13304040-13304059 | Msa1277600:intron | 35.0% | |
| CAGCTTATTACTAAAGAGGA+AGG | + | chr8_3:13304044-13304063 | Msa1277600:intron | 35.0% | |
| GTTAGTCCTTTATGAAGACA+TGG | + | chr8_3:13304067-13304086 | Msa1277600:CDS | 35.0% | |
| ATGAAGACATGGTATTAGGA+AGG | + | chr8_3:13304078-13304097 | Msa1277600:CDS | 35.0% | |
| TGTGCTGAGATGTATTATAG+GGG | + | chr8_3:13304116-13304135 | Msa1277600:CDS | 35.0% | |
| CCTCAAATACTTGATGAATC+CGG | - | chr8_3:13304192-13304211 | None:intergenic | 35.0% | |
| TTCCATGAAGTACAAAAGAG+AGG | + | chr8_3:13304427-13304446 | Msa1277600:CDS | 35.0% | |
| ! | TGATTCTGATAACGTGACAT+TGG | + | chr8_3:13304463-13304482 | Msa1277600:CDS | 35.0% |
| ! | AACGTGACATTGGCATTTTT+CGG | + | chr8_3:13304473-13304492 | Msa1277600:CDS | 35.0% |
| ATTACCAATTGTGTTTGTGG+TGG | + | chr8_3:13304556-13304575 | Msa1277600:CDS | 35.0% | |
| ! | TTTTCCACCACAAACACAAT+TGG | - | chr8_3:13304563-13304582 | None:intergenic | 35.0% |
| ! | TTGTGGTGGAAAACAATTTG+TGG | + | chr8_3:13304570-13304589 | Msa1277600:CDS | 35.0% |
| ! | TGTGGTGGAAAACAATTTGT+GGG | + | chr8_3:13304571-13304590 | Msa1277600:CDS | 35.0% |
| AAAACAATTTGTGGGCCATT+GGG | + | chr8_3:13304579-13304598 | Msa1277600:CDS | 35.0% | |
| AGATCCTCAGATATGGAAAA+AGG | + | chr8_3:13304625-13304644 | Msa1277600:CDS | 35.0% | |
| GATCCTCAGATATGGAAAAA+GGG | + | chr8_3:13304626-13304645 | Msa1277600:CDS | 35.0% | |
| CAGATTTAGAGGACATTCAT+TGG | + | chr8_3:13304778-13304797 | Msa1277600:CDS | 35.0% | |
| ! | CAAGAATTCTAAAGGAAGCT+AGG | - | chr8_3:13304975-13304994 | None:intergenic | 35.0% |
| AGCGTCTTCAAGAATTCTAA+AGG | - | chr8_3:13304983-13305002 | None:intergenic | 35.0% | |
| AACAAAAAGCAATGACCAAG+AGG | - | chr8_3:13305012-13305031 | None:intergenic | 35.0% | |
| ! | GAAGTTATTCTAAGGAAGCT+TGG | - | chr8_3:13305053-13305072 | None:intergenic | 35.0% |
| GAAAATCGTATTTGCTTGGT+TGG | - | chr8_3:13305161-13305180 | None:intergenic | 35.0% | |
| TTTGTAAAACCCTTGGAACA+AGG | - | chr8_3:13305262-13305281 | None:intergenic | 35.0% | |
| CTTAGGATGACATCTACAAA+GGG | - | chr8_3:13305654-13305673 | None:intergenic | 35.0% | |
| ACTTAGGATGACATCTACAA+AGG | - | chr8_3:13305655-13305674 | None:intergenic | 35.0% | |
| TAAATACTCGTGAGACTGAT+TGG | + | chr8_3:13305853-13305872 | Msa1277600:intron | 35.0% | |
| AAATACTCGTGAGACTGATT+GGG | + | chr8_3:13305854-13305873 | Msa1277600:intron | 35.0% | |
| !!! | GATCCAAAAGGTTTTGGAAT+TGG | + | chr8_3:13306242-13306261 | Msa1277600:CDS | 35.0% |
| !!! | AAAAGGTTTTGGAATTGGAC+CGG | + | chr8_3:13306247-13306266 | Msa1277600:CDS | 35.0% |
| ATCAGCACACTTTGTTCTTT+AGG | + | chr8_3:13306425-13306444 | Msa1277600:three_prime_UTR | 35.0% | |
| !! | TGTTCTTTAGGTTGGAAGTT+TGG | + | chr8_3:13306437-13306456 | Msa1277600:three_prime_UTR | 35.0% |
| ATACTTGTGCCATGAGAATA+TGG | + | chr8_3:13306589-13306608 | Msa1277600:three_prime_UTR | 35.0% | |
| CAATCTACTCCATATTCTCA+TGG | - | chr8_3:13306601-13306620 | None:intergenic | 35.0% | |
| CATGAGAATATGGAGTAGAT+TGG | + | chr8_3:13306599-13306618 | Msa1277600:three_prime_UTR | 35.0% | |
| AGATCAGAAGAGAAAGAGAG+TGG | - | chr8_3:13302491-13302510 | None:intergenic | 40.0% | |
| CCAAGAAAAGAGGAAGAAGA+AGG | - | chr8_3:13302527-13302546 | None:intergenic | 40.0% | |
| ! | CCTTCTTCTTCCTCTTTTCT+TGG | + | chr8_3:13302524-13302543 | Msa1277600:CDS | 40.0% |
| CTGAGTAGATCCAAGAAAAG+AGG | - | chr8_3:13302537-13302556 | None:intergenic | 40.0% | |
| AAGTGTATCCAATGTCCAAC+AGG | - | chr8_3:13302825-13302844 | None:intergenic | 40.0% | |
| ACACTTTCGATCAGATGTGT+AGG | + | chr8_3:13302839-13302858 | Msa1277600:intron | 40.0% | |
| ACGTCTTCAATCAGATGTGT+CGG | + | chr8_3:13303130-13303149 | Msa1277600:intron | 40.0% | |
| GTTATAGCCTTCTTGTGTAG+CGG | + | chr8_3:13303886-13303905 | Msa1277600:intron | 40.0% | |
| TAAGATTCCGCTACACAAGA+AGG | - | chr8_3:13303896-13303915 | None:intergenic | 40.0% | |
| CTCAGCACATTTGTCTTCAA+AGG | - | chr8_3:13304105-13304124 | None:intergenic | 40.0% | |
| GTGCTGAGATGTATTATAGG+GGG | + | chr8_3:13304117-13304136 | Msa1277600:CDS | 40.0% | |
| !! | GGTTTTGTCCACTTGTACAA+TGG | + | chr8_3:13304149-13304168 | Msa1277600:CDS | 40.0% |
| CTTCTTGTCCATTGTACAAG+TGG | - | chr8_3:13304160-13304179 | None:intergenic | 40.0% | |
| CCGGATTCATCAAGTATTTG+AGG | + | chr8_3:13304189-13304208 | Msa1277600:CDS | 40.0% | |
| ATGTTCACGCGTTGAGTAAA+GGG | + | chr8_3:13304246-13304265 | Msa1277600:CDS | 40.0% | |
| GAAGTGATGAGTGAACTCTT+CGG | + | chr8_3:13304281-13304300 | Msa1277600:CDS | 40.0% | |
| TCAAAAGAACACAACGTGCT+CGG | + | chr8_3:13304353-13304372 | Msa1277600:CDS | 40.0% | |
| ! | CACCTCTCTTTTGTACTTCA+TGG | - | chr8_3:13304432-13304451 | None:intergenic | 40.0% |
| !! | ACATTGGCATTTTTCGGAGA+TGG | + | chr8_3:13304479-13304498 | Msa1277600:CDS | 40.0% |
| GGAGATGGAACTTGTAACAA+TGG | + | chr8_3:13304494-13304513 | Msa1277600:CDS | 40.0% | |
| ! | GTTTAAACATGGCTGCTTTG+TGG | + | chr8_3:13304531-13304550 | Msa1277600:CDS | 40.0% |
| GAAAACAATTTGTGGGCCAT+TGG | + | chr8_3:13304578-13304597 | Msa1277600:CDS | 40.0% | |
| CATTGGGATGTCACATCTTA+GGG | + | chr8_3:13304595-13304614 | Msa1277600:CDS | 40.0% | |
| CAACTTCAGATCCTCAGATA+TGG | + | chr8_3:13304618-13304637 | Msa1277600:CDS | 40.0% | |
| !!! | TGTTTTGAAGGTCAGAGAAG+TGG | + | chr8_3:13304691-13304710 | Msa1277600:CDS | 40.0% |
| TGCGAGACTTACAGATTTAG+AGG | + | chr8_3:13304767-13304786 | Msa1277600:CDS | 40.0% | |
| ! | GGTTGGTATCATCAATGATG+TGG | - | chr8_3:13305144-13305163 | None:intergenic | 40.0% |
| AACCAATCAACCTTGTTCCA+AGG | + | chr8_3:13305249-13305268 | Msa1277600:intron | 40.0% | |
| ACCAATCAACCTTGTTCCAA+GGG | + | chr8_3:13305250-13305269 | Msa1277600:intron | 40.0% | |
| !! | CTTGACTTCAGTTGTTTTGC+TGG | + | chr8_3:13305379-13305398 | Msa1277600:intron | 40.0% |
| ! | AAGCCACATCTTTTTGTTCG+CGG | + | chr8_3:13305791-13305810 | Msa1277600:intron | 40.0% |
| TTTCTATTTGGCAGCTGAGA+AGG | + | chr8_3:13306034-13306053 | Msa1277600:intron | 40.0% | |
| AGCCACTGAACAAGAATTGA+AGG | + | chr8_3:13306118-13306137 | Msa1277600:CDS | 40.0% | |
| TGCCTTCAATTCTTGTTCAG+TGG | - | chr8_3:13306123-13306142 | None:intergenic | 40.0% | |
| ! | GGTCCAATTCCAAAACCTTT+TGG | - | chr8_3:13306248-13306267 | None:intergenic | 40.0% |
| GAGGATCCAAAGTTTACTGA+AGG | + | chr8_3:13306287-13306306 | Msa1277600:CDS | 40.0% | |
| GATACAAAAATAAAGCGCGC+AGG | - | chr8_3:13306335-13306354 | None:intergenic | 40.0% | |
| GCACACTTTGTTCTTTAGGT+TGG | + | chr8_3:13306429-13306448 | Msa1277600:three_prime_UTR | 40.0% | |
| GAATACAAGGGAGTGAGACA+TGG | - | chr8_3:13302250-13302269 | None:intergenic | 45.0% | |
| AATAGGGGCGGAGAATACAA+GGG | - | chr8_3:13302262-13302281 | None:intergenic | 45.0% | |
| TGAAGAAGAACAGCAGCAAC+AGG | - | chr8_3:13302596-13302615 | None:intergenic | 45.0% | |
| ACTGAGTCTTAGAGTGACAC+TGG | + | chr8_3:13302737-13302756 | Msa1277600:intron | 45.0% | |
| ! | AGATGTGTCGATGTCAGACA+TGG | + | chr8_3:13302796-13302815 | Msa1277600:intron | 45.0% |
| TTGGGATATGAAGCACACAC+TGG | + | chr8_3:13303010-13303029 | Msa1277600:intron | 45.0% | |
| TAGATGCTATAGCGGTGTGA+AGG | + | chr8_3:13303861-13303880 | Msa1277600:intron | 45.0% | |
| GTGTATTCGATCGTGGATAG+AGG | - | chr8_3:13303934-13303953 | None:intergenic | 45.0% | |
| CAAAGCAGTGTATTCGATCG+TGG | - | chr8_3:13303941-13303960 | None:intergenic | 45.0% | |
| ! | GGACAAGAAGCTGTTTCAAC+CGG | + | chr8_3:13304170-13304189 | Msa1277600:CDS | 45.0% |
| CTTTACTCAACGCGTGAACA+TGG | - | chr8_3:13304247-13304266 | None:intergenic | 45.0% | |
| CATGTTCACGCGTTGAGTAA+AGG | + | chr8_3:13304245-13304264 | Msa1277600:CDS | 45.0% | |
| TGTTCACGCGTTGAGTAAAG+GGG | + | chr8_3:13304247-13304266 | Msa1277600:CDS | 45.0% | |
| CACTCATCACTTCTCGAGAA+GGG | - | chr8_3:13304274-13304293 | None:intergenic | 45.0% | |
| TCACTCATCACTTCTCGAGA+AGG | - | chr8_3:13304275-13304294 | None:intergenic | 45.0% | |
| GATGAGTGAACTCTTCGGTA+AGG | + | chr8_3:13304286-13304305 | Msa1277600:CDS | 45.0% | |
| !! | CTCGGTGGTTTTGCATTCAT+CGG | + | chr8_3:13304371-13304390 | Msa1277600:CDS | 45.0% |
| ! | GGTTTTGCATTCATCGGTGA+AGG | + | chr8_3:13304377-13304396 | Msa1277600:CDS | 45.0% |
| CTTCATGGAAAATGCAGCAC+CGG | - | chr8_3:13304417-13304436 | None:intergenic | 45.0% | |
| TCACGTTATCAGAATCAGCC+TGG | - | chr8_3:13304460-13304479 | None:intergenic | 45.0% | |
| CCTAAGATGTGACATCCCAA+TGG | - | chr8_3:13304597-13304616 | None:intergenic | 45.0% | |
| CCATTGGGATGTCACATCTT+AGG | + | chr8_3:13304594-13304613 | Msa1277600:CDS | 45.0% | |
| ! | GGACCCTTTTTCCATATCTG+AGG | - | chr8_3:13304632-13304651 | None:intergenic | 45.0% |
| !! | CGATGGGATGGATGTTTTGA+AGG | + | chr8_3:13304679-13304698 | Msa1277600:CDS | 45.0% |
| AGGAGAAGGACCAACTTTAG+TGG | + | chr8_3:13304742-13304761 | Msa1277600:CDS | 45.0% | |
| GTCTCGCATTCCACTAAAGT+TGG | - | chr8_3:13304755-13304774 | None:intergenic | 45.0% | |
| GAAGACGCTAAACTTCCTCT+TGG | + | chr8_3:13304994-13305013 | Msa1277600:intron | 45.0% | |
| ! | ACCCTTGGAACAAGGTTGAT+TGG | - | chr8_3:13305254-13305273 | None:intergenic | 45.0% |
| CAGTCTGAATAGTTAGAGCG+TGG | + | chr8_3:13305293-13305312 | Msa1277600:intron | 45.0% | |
| ACTGTTCTGCAGTCAACAAC+TGG | - | chr8_3:13305341-13305360 | None:intergenic | 45.0% | |
| TGATACTTCTAGCGCATCGT+TGG | + | chr8_3:13305560-13305579 | Msa1277600:intron | 45.0% | |
| ! | TTTTTGTTCGCGGTCCTGTT+TGG | + | chr8_3:13305801-13305820 | Msa1277600:intron | 45.0% |
| AGACTGATTGGGAGAGCTTA+TGG | + | chr8_3:13305865-13305884 | Msa1277600:intron | 45.0% | |
| AGAAGGAACACTATGCTGGT+AGG | + | chr8_3:13306051-13306070 | Msa1277600:CDS | 45.0% | |
| GAAGGAACACTATGCTGGTA+GGG | + | chr8_3:13306052-13306071 | Msa1277600:CDS | 45.0% | |
| GAAAATTGATGAGGTCCTCG+AGG | + | chr8_3:13306151-13306170 | Msa1277600:CDS | 45.0% | |
| ! | CGAAGACATTCTCTAGAAGC+TGG | - | chr8_3:13306220-13306239 | None:intergenic | 45.0% |
| AATGTCTTCGCCGATCCAAA+AGG | + | chr8_3:13306230-13306249 | Msa1277600:CDS | 45.0% | |
| ! | TTCGCCGATCCAAAAGGTTT+TGG | + | chr8_3:13306236-13306255 | Msa1277600:CDS | 45.0% |
| TCGCATCTATACCTTCCATC+CGG | - | chr8_3:13306269-13306288 | None:intergenic | 45.0% | |
| GCAGTGCCTTCAGTAAACTT+TGG | - | chr8_3:13306296-13306315 | None:intergenic | 45.0% | |
| GAATAGGGGCGGAGAATACA+AGG | - | chr8_3:13302263-13302282 | None:intergenic | 50.0% | |
| ! | CAGCAACAGGTGGTGATGAA+CGG | - | chr8_3:13302583-13302602 | None:intergenic | 50.0% |
| AGAAGAACAGCAGCAACAGG+TGG | - | chr8_3:13302593-13302612 | None:intergenic | 50.0% | |
| GGGCTATGAAACACTGACAC+TGG | + | chr8_3:13302712-13302731 | Msa1277600:intron | 50.0% | |
| TGTCAGACATGGACACCTGT+TGG | + | chr8_3:13302807-13302826 | Msa1277600:intron | 50.0% | |
| CATGGACACCTGTTGGACAT+TGG | + | chr8_3:13302814-13302833 | Msa1277600:intron | 50.0% | |
| ACTGGACATGAGAGTGACAC+CGG | + | chr8_3:13303028-13303047 | Msa1277600:intron | 50.0% | |
| AAAGAACACAACGTGCTCGG+TGG | + | chr8_3:13304356-13304375 | Msa1277600:CDS | 50.0% | |
| CATCGGTGAAGGAATTCCAG+TGG | + | chr8_3:13304388-13304407 | Msa1277600:CDS | 50.0% | |
| !! | CAAAAGAGAGGTGCTGAACC+AGG | + | chr8_3:13304439-13304458 | Msa1277600:CDS | 50.0% |
| TGGAAAAAGGGTCCAGCGTT+CGG | + | chr8_3:13304638-13304657 | Msa1277600:CDS | 50.0% | |
| ATGCCAGGTGTTCATGTCGA+TGG | + | chr8_3:13304662-13304681 | Msa1277600:CDS | 50.0% | |
| TGCCAGGTGTTCATGTCGAT+GGG | + | chr8_3:13304663-13304682 | Msa1277600:CDS | 50.0% | |
| ATCCCATCGACATGAACACC+TGG | - | chr8_3:13304668-13304687 | None:intergenic | 50.0% | |
| AGGTGTTCATGTCGATGGGA+TGG | + | chr8_3:13304667-13304686 | Msa1277600:CDS | 50.0% | |
| GCAATTGACAGGGCTAGAAG+AGG | + | chr8_3:13304722-13304741 | Msa1277600:CDS | 50.0% | |
| GTTGACTGCAGAACAGTGAC+TGG | + | chr8_3:13305344-13305363 | Msa1277600:intron | 50.0% | |
| GGACCGCGAACAAAAAGATG+TGG | - | chr8_3:13305797-13305816 | None:intergenic | 50.0% | |
| GCTGAGAAGGAACACTATGC+TGG | + | chr8_3:13306047-13306066 | Msa1277600:intron | 50.0% | |
| CGAAATCAACAGCATCCTCG+AGG | - | chr8_3:13306169-13306188 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGAATTGGACCGGA+TGG | + | chr8_3:13306251-13306270 | Msa1277600:CDS | 50.0% |
| TTGGAATTGGACCGGATGGA+AGG | + | chr8_3:13306255-13306274 | Msa1277600:CDS | 50.0% | |
| ! | GGATGGAAGGTATAGATGCG+AGG | + | chr8_3:13306268-13306287 | Msa1277600:CDS | 50.0% |
| CTGGACATGAGAGTGACACC+GGG | + | chr8_3:13303029-13303048 | Msa1277600:intron | 55.0% | |
| GAACTCTTCGGTAAGGCGAC+AGG | + | chr8_3:13304293-13304312 | Msa1277600:CDS | 55.0% | |
| ACAGGATGTTGCCGAGGTCA+GGG | + | chr8_3:13304311-13304330 | Msa1277600:CDS | 55.0% | |
| GCATTGAACCACCCTGACCT+CGG | - | chr8_3:13304325-13304344 | None:intergenic | 55.0% | |
| GAAGGAATTCCAGTGGCCAC+CGG | + | chr8_3:13304395-13304414 | Msa1277600:CDS | 55.0% | |
| ! | CATGGAAAATGCAGCACCGG+TGG | - | chr8_3:13304414-13304433 | None:intergenic | 55.0% |
| GAAGGTCAGAGAAGTGGCGA+AGG | + | chr8_3:13304697-13304716 | Msa1277600:CDS | 55.0% | |
| TGGCGAAGGAGGCAATTGAC+AGG | + | chr8_3:13304711-13304730 | Msa1277600:CDS | 55.0% | |
| GGCGAAGGAGGCAATTGACA+GGG | + | chr8_3:13304712-13304731 | Msa1277600:CDS | 55.0% | |
| GACAGGGCTAGAAGAGGAGA+AGG | + | chr8_3:13304728-13304747 | Msa1277600:CDS | 55.0% | |
| CCAGGGTTACGAAGCTCATC+AGG | - | chr8_3:13304809-13304828 | None:intergenic | 55.0% | |
| CCTGATGAGCTTCGTAACCC+TGG | + | chr8_3:13304806-13304825 | Msa1277600:CDS | 55.0% | |
| TCTAGAAGCTGGCTGCGAAG+TGG | - | chr8_3:13306209-13306228 | None:intergenic | 55.0% | |
| AAGGCGACAGGATGTTGCCG+AGG | + | chr8_3:13304305-13304324 | Msa1277600:CDS | 60.0% | |
| GACAGGATGTTGCCGAGGTC+AGG | + | chr8_3:13304310-13304329 | Msa1277600:CDS | 60.0% | |
| ACACCTGGCATTCCGAACGC+TGG | - | chr8_3:13304653-13304672 | None:intergenic | 60.0% | |
| GGTCAGAGAAGTGGCGAAGG+AGG | + | chr8_3:13304700-13304719 | Msa1277600:CDS | 60.0% | |
| GGATGTTGCCGAGGTCAGGG+TGG | + | chr8_3:13304314-13304333 | Msa1277600:CDS | 65.0% | |
| !! | AATGCAGCACCGGTGGCCAC+TGG | - | chr8_3:13304407-13304426 | None:intergenic | 65.0% |
| GGTCCAGCGTTCGGAATGCC+AGG | + | chr8_3:13304647-13304666 | Msa1277600:CDS | 65.0% | |
| GCTGGCTGCGAAGTGGTGCA+GGG | - | chr8_3:13306202-13306221 | None:intergenic | 65.0% | |
| AGCTGGCTGCGAAGTGGTGC+AGG | - | chr8_3:13306203-13306222 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 13302182 | 13306628 | 13302182 | ID=Msa1277600;Name=Msa1277600 |
| chr8_3 | mRNA | 13302182 | 13306628 | 13302182 | ID=Msa1277600-mRNA-1;Parent=Msa1277600;Name=Msa1277600-mRNA-1;_AED=0.00;_eAED=0.00;_QI=225|1|1|1|1|1|3|303|427 |
| chr8_3 | exon | 13302182 | 13302631 | 13302182 | ID=Msa1277600-mRNA-1:exon:5220;Parent=Msa1277600-mRNA-1 |
| chr8_3 | exon | 13304047 | 13304827 | 13304047 | ID=Msa1277600-mRNA-1:exon:5221;Parent=Msa1277600-mRNA-1 |
| chr8_3 | exon | 13306048 | 13306628 | 13306048 | ID=Msa1277600-mRNA-1:exon:5222;Parent=Msa1277600-mRNA-1 |
| chr8_3 | five_prime_UTR | 13302182 | 13302406 | 13302182 | ID=Msa1277600-mRNA-1:five_prime_utr;Parent=Msa1277600-mRNA-1 |
| chr8_3 | CDS | 13302407 | 13302631 | 13302407 | ID=Msa1277600-mRNA-1:cds;Parent=Msa1277600-mRNA-1 |
| chr8_3 | CDS | 13304047 | 13304827 | 13304047 | ID=Msa1277600-mRNA-1:cds;Parent=Msa1277600-mRNA-1 |
| chr8_3 | CDS | 13306048 | 13306325 | 13306048 | ID=Msa1277600-mRNA-1:cds;Parent=Msa1277600-mRNA-1 |
| chr8_3 | three_prime_UTR | 13306326 | 13306628 | 13306326 | ID=Msa1277600-mRNA-1:three_prime_utr;Parent=Msa1277600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
