Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282010 | sp|Q42586|UMPS_ARATH | 74.268 | 478 | 114 | 3 | 1 | 475 | 4 | 475 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282010 | Q1RU71 | 95.789 | 475 | 14 | 1 | 1 | 475 | 1 | 469 | 0.0 | 928 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027540 | Msa1282010 | 0.802246 | 6.143984e-49 | -8.615850e-47 |
| Msa0028060 | Msa1282010 | 0.802440 | 5.603860e-49 | -8.615850e-47 |
| Msa0032120 | Msa1282010 | 0.828961 | 6.719085e-55 | -8.615850e-47 |
| Msa0075310 | Msa1282010 | 0.800596 | 1.338463e-48 | -8.615850e-47 |
| Msa0091770 | Msa1282010 | 0.802735 | 4.873263e-49 | -8.615850e-47 |
| Msa0621120 | Msa1282010 | 0.802047 | 6.751570e-49 | -8.615850e-47 |
| Msa0168100 | Msa1282010 | 0.800994 | 1.110011e-48 | -8.615850e-47 |
| Msa0183620 | Msa1282010 | 0.806135 | 9.529009e-50 | -8.615850e-47 |
| Msa0207000 | Msa1282010 | 0.808703 | 2.718890e-50 | -8.615850e-47 |
| Msa1240540 | Msa1282010 | 0.963970 | 9.652502e-123 | -8.615850e-47 |
| Msa1282010 | Msa1284520 | 0.827758 | 1.310884e-54 | -8.615850e-47 |
| Msa1282010 | Msa1398480 | 0.816042 | 6.782137e-52 | -8.615850e-47 |
| Msa0378080 | Msa1282010 | 0.812145 | 4.911266e-51 | -8.615850e-47 |
| Msa0425940 | Msa1282010 | 0.807561 | 4.759188e-50 | -8.615850e-47 |
| Msa0426160 | Msa1282010 | 0.812973 | 3.237279e-51 | -8.615850e-47 |
| Msa0431430 | Msa1282010 | 0.801290 | 9.655226e-49 | -8.615850e-47 |
| Msa1018050 | Msa1282010 | 0.809769 | 1.606464e-50 | -8.615850e-47 |
| Msa1073840 | Msa1282010 | 0.804232 | 2.384972e-49 | -8.615850e-47 |
| Msa1186380 | Msa1282010 | 0.899197 | 2.516211e-77 | -8.615850e-47 |
| Msa1188940 | Msa1282010 | 0.806255 | 8.990563e-50 | -8.615850e-47 |
| Msa0527600 | Msa1282010 | 0.800966 | 1.124582e-48 | -8.615850e-47 |
| Msa0546840 | Msa1282010 | 0.810293 | 1.238716e-50 | -8.615850e-47 |
| Msa0589150 | Msa1282010 | 0.820045 | 8.440626e-53 | -8.615850e-47 |
| Msa0845750 | Msa1282010 | 0.804574 | 2.023714e-49 | -8.615850e-47 |
| Msa0883030 | Msa1282010 | 0.820228 | 7.664054e-53 | -8.615850e-47 |
| Msa0890250 | Msa1282010 | 0.801200 | 1.007478e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282010 | MtrunA17_Chr8g0352721 | 95.789 | 475 | 14 | 1 | 1 | 475 | 1 | 469 | 0.0 | 928 |
| Msa1282010 | MtrunA17_Chr3g0083561 | 83.824 | 476 | 68 | 2 | 1 | 473 | 7 | 476 | 0.0 | 790 |
| Msa1282010 | MtrunA17_Chr1g0156541 | 83.403 | 476 | 70 | 2 | 1 | 473 | 7 | 476 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282010 | AT3G54470.1 | 74.268 | 478 | 114 | 3 | 1 | 475 | 4 | 475 | 0.0 | 734 |
Find 140 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTTCTCAGTGAGCTTTA+AGG | 0.126315 | 8_3:-22130377 | None:intergenic |
| CAGAGGGATCTTTCATATAT+TGG | 0.199334 | 8_3:+22131860 | Msa1282010:intron |
| GATATCTCAGCTGTCAAATT+TGG | 0.202375 | 8_3:+22130433 | Msa1282010:CDS |
| GAAGAAGGCATTGTCATATT+TGG | 0.205194 | 8_3:+22131026 | Msa1282010:CDS |
| GATCATTCTGACTTTGTTAT+TGG | 0.242263 | 8_3:+22132144 | Msa1282010:CDS |
| TCAAGGATGGAGTGCATATT+TGG | 0.250929 | 8_3:+22133367 | Msa1282010:CDS |
| GCGATCGGTGGTGATGGTTT+GGG | 0.264314 | 8_3:+22132249 | Msa1282010:CDS |
| GGCGATCGGTGGTGATGGTT+TGG | 0.272966 | 8_3:+22132248 | Msa1282010:CDS |
| AATCACAACTCGAAATATTA+TGG | 0.274633 | 8_3:+22133610 | Msa1282010:three_prime_UTR |
| TATTTGGAAAAGTGCAATTA+AGG | 0.276049 | 8_3:+22133383 | Msa1282010:CDS |
| TCAATCCAGCGTCGTGGTCT+AGG | 0.288057 | 8_3:+22132178 | Msa1282010:CDS |
| TACTAGTGGAACATCGGTTT+TGG | 0.292483 | 8_3:+22130756 | Msa1282010:CDS |
| GCAATAGGTAGGGCAGTATA+AGG | 0.296272 | 8_3:-22130601 | None:intergenic |
| AAATCAGAAGGTTGCTGCTT+TGG | 0.305232 | 8_3:+22130987 | Msa1282010:CDS |
| TATCATATTGAATGCAAGTT+TGG | 0.316333 | 8_3:+22133511 | Msa1282010:three_prime_UTR |
| CCAAACTCTTCCATTTGGTT+AGG | 0.322827 | 8_3:-22133415 | None:intergenic |
| CTCGCCATCGTATACTTAAA+AGG | 0.323758 | 8_3:+22128804 | Msa1282010:five_prime_UTR |
| CCTAACCAAATGGAAGAGTT+TGG | 0.324055 | 8_3:+22133415 | Msa1282010:three_prime_UTR |
| AAAGAGGTTGTTTGAGATAA+TGG | 0.328518 | 8_3:+22131080 | Msa1282010:CDS |
| CAGAAGGGTAAGATATAATA+AGG | 0.338277 | 8_3:-22130507 | None:intergenic |
| AACTTGCATTCAATATGATA+TGG | 0.342735 | 8_3:-22133508 | None:intergenic |
| ATCTCCCTTGGCAAGGTTAC+CGG | 0.343357 | 8_3:-22132091 | None:intergenic |
| GTTGCAATACTTACAGAATA+TGG | 0.343716 | 8_3:-22132288 | None:intergenic |
| ACAAGGTGGAAGAGAGAATC+TGG | 0.364094 | 8_3:+22130846 | Msa1282010:CDS |
| AGGCGTAGGTCTATGTAAAT+TGG | 0.365906 | 8_3:-22130487 | None:intergenic |
| TGTTTCATTCATGCAACTCC+TGG | 0.370072 | 8_3:+22132216 | Msa1282010:CDS |
| GGTTGTTATGAGATTCTTAG+AGG | 0.375138 | 8_3:+22130963 | Msa1282010:CDS |
| ACACAACTTCTTAATATTTG+AGG | 0.375899 | 8_3:+22131697 | Msa1282010:CDS |
| CGCAAGGAAATCAAAGACTA+TGG | 0.377270 | 8_3:+22130667 | Msa1282010:CDS |
| GGCTTGATGAGGAGATGGTT+AGG | 0.383602 | 8_3:+22130941 | Msa1282010:CDS |
| TGTGGATGGACTGAAATTAA+AGG | 0.386249 | 8_3:+22131929 | Msa1282010:CDS |
| GATCTTTCATATATTGGATT+GGG | 0.387093 | 8_3:+22131866 | Msa1282010:CDS |
| TAAGCATGGCCAAAGTTGTT+TGG | 0.403073 | 8_3:+22130717 | Msa1282010:CDS |
| CGAAGCTTAGAACCGAAATC+TGG | 0.403310 | 8_3:-22131427 | None:intergenic |
| CCGAAATCTGGAGTAAAATC+TGG | 0.404468 | 8_3:-22131415 | None:intergenic |
| CCAAAGTTGTTTGGTAATTG+AGG | 0.407599 | 8_3:+22130726 | Msa1282010:CDS |
| TTCAGTCCATCCACAATTCC+AGG | 0.408605 | 8_3:-22131921 | None:intergenic |
| CTCTGTTTGGCTGCGGATGT+TGG | 0.411459 | 8_3:+22131120 | Msa1282010:CDS |
| GGAAACTTCAAGCTTAAATC+CGG | 0.413842 | 8_3:+22130454 | Msa1282010:CDS |
| CACACCCAAACTCTTCCATT+TGG | 0.416706 | 8_3:-22133420 | None:intergenic |
| CAAACTCTTCCATTTGGTTA+GGG | 0.419984 | 8_3:-22133414 | None:intergenic |
| CTAACCAAATGGAAGAGTTT+GGG | 0.426497 | 8_3:+22133416 | Msa1282010:three_prime_UTR |
| TAGGGTTTGCCTCGTGGAAA+GGG | 0.428884 | 8_3:+22132039 | Msa1282010:intron |
| GAAGGAAAGTAATCTCTGTT+TGG | 0.438745 | 8_3:+22131107 | Msa1282010:CDS |
| AATTCTTAAATTGACTGAAA+TGG | 0.439196 | 8_3:+22130894 | Msa1282010:CDS |
| GGATCTTTCATATATTGGAT+TGG | 0.442158 | 8_3:+22131865 | Msa1282010:CDS |
| GCTCGCGAATACCGTCTTCA+AGG | 0.453060 | 8_3:+22133350 | Msa1282010:CDS |
| GCTCACATTATCTCTGGTCC+TGG | 0.454214 | 8_3:+22131903 | Msa1282010:CDS |
| TCATAGTTTGAGAAATTTGT+CGG | 0.458857 | 8_3:-22130534 | None:intergenic |
| ACAGATACACAAGTGGCAAT+AGG | 0.466504 | 8_3:-22130616 | None:intergenic |
| ATTTGACAGCTGAGATATCA+TGG | 0.469219 | 8_3:-22130429 | None:intergenic |
| CCTCAATTACCAAACAACTT+TGG | 0.470170 | 8_3:-22130726 | None:intergenic |
| ATGCTTAAAATCCCCTTCAA+TGG | 0.472118 | 8_3:-22130701 | None:intergenic |
| ATAACTTCACACATAATGCT+TGG | 0.472319 | 8_3:-22133558 | None:intergenic |
| CAATCCAGCGTCGTGGTCTA+GGG | 0.472624 | 8_3:+22132179 | Msa1282010:CDS |
| GTAAATGCTCACATTATCTC+TGG | 0.472821 | 8_3:+22131897 | Msa1282010:CDS |
| TCAAACAACCTCTTTCCCAT+TGG | 0.473332 | 8_3:-22131072 | None:intergenic |
| TTAGGGTTTGCCTCGTGGAA+AGG | 0.474549 | 8_3:+22132038 | Msa1282010:intron |
| TGCAACTCCTGGAGTTCAAA+TGG | 0.475453 | 8_3:+22132227 | Msa1282010:CDS |
| TCCTTAAAGCTCACTGAGAA+AGG | 0.478439 | 8_3:+22130376 | Msa1282010:five_prime_UTR |
| TATCATCAAAGCAGCAAATC+CGG | 0.479086 | 8_3:+22133319 | Msa1282010:CDS |
| GCTTGTATTCCCTAACCAAA+TGG | 0.481263 | 8_3:+22133405 | Msa1282010:three_prime_UTR |
| TCAATATGATATGGATGTGC+AGG | 0.483498 | 8_3:-22133499 | None:intergenic |
| GCTTGATGAGGAGATGGTTA+GGG | 0.487710 | 8_3:+22130942 | Msa1282010:CDS |
| GGCACTTCTAAAGCCATTGA+AGG | 0.492625 | 8_3:+22130688 | Msa1282010:CDS |
| TAATGTCACTACCCCTATCA+TGG | 0.494196 | 8_3:-22133280 | None:intergenic |
| ACCTCGGCCATGCAGTATGA+AGG | 0.495056 | 8_3:+22131746 | Msa1282010:CDS |
| CTTTGTTATTGGCTTCATCT+CGG | 0.496047 | 8_3:+22132155 | Msa1282010:CDS |
| GCTGCGCCGTTGCGTAACAT+AGG | 0.500507 | 8_3:+22130784 | Msa1282010:CDS |
| TATTCGCGAGCTGCTGCAGC+CGG | 0.500541 | 8_3:-22133338 | None:intergenic |
| GCGAATACCGTCTTCAAGGA+TGG | 0.504437 | 8_3:+22133354 | Msa1282010:CDS |
| CGATCGGTGGTGATGGTTTG+GGG | 0.505389 | 8_3:+22132250 | Msa1282010:CDS |
| GTTTGAGATAATGGCTGAGA+AGG | 0.509959 | 8_3:+22131089 | Msa1282010:CDS |
| AGAGAGAATCTGGAGAGTAA+TGG | 0.516591 | 8_3:+22130856 | Msa1282010:CDS |
| ATTGAGGATTTAGTTACTAG+TGG | 0.516671 | 8_3:+22130742 | Msa1282010:CDS |
| CACTGAGAAAGGCACATCAA+TGG | 0.517073 | 8_3:+22130387 | Msa1282010:exon |
| CCGATCGCCATTTGAACTCC+AGG | 0.521870 | 8_3:-22132234 | None:intergenic |
| TGCAGCAGTGTAATCTCCCT+TGG | 0.523218 | 8_3:-22132103 | None:intergenic |
| TCTGGTCCTGGAATTGTGGA+TGG | 0.523500 | 8_3:+22131915 | Msa1282010:CDS |
| TATCTCTGGTCCTGGAATTG+TGG | 0.523722 | 8_3:+22131911 | Msa1282010:CDS |
| GTTGCGTAACATAGGGTTGA+AGG | 0.525932 | 8_3:+22130792 | Msa1282010:CDS |
| GTAAATTGGTGAGGAGATGC+CGG | 0.527390 | 8_3:-22130473 | None:intergenic |
| AGGAAGGCTTGATGAGGAGA+TGG | 0.530753 | 8_3:+22130936 | Msa1282010:CDS |
| CAAATGGCGATCGGTGGTGA+TGG | 0.537216 | 8_3:+22132243 | Msa1282010:CDS |
| TCCTTGCGGCGCATAACCAT+AGG | 0.538031 | 8_3:-22130652 | None:intergenic |
| GAAATTTGTCGGAGGACAGA+AGG | 0.538225 | 8_3:-22130523 | None:intergenic |
| GCACTTCTAAAGCCATTGAA+GGG | 0.540930 | 8_3:+22130689 | Msa1282010:CDS |
| GACAAGGTCGAATTTAGTGT+TGG | 0.550319 | 8_3:-22130569 | None:intergenic |
| CTTGCTGAAATGAGTTCAGC+CGG | 0.550747 | 8_3:+22132072 | Msa1282010:CDS |
| ATGCAGCAGCGGCAATAACA+AGG | 0.553585 | 8_3:+22128836 | Msa1282010:five_prime_UTR |
| AAATACAACTAAGTTGAAGA+AGG | 0.554785 | 8_3:+22131011 | Msa1282010:CDS |
| CCCTTCATACTGCATGGCCG+AGG | 0.557238 | 8_3:-22131747 | None:intergenic |
| CCTTGCGGCGCATAACCATA+GGG | 0.557370 | 8_3:-22130651 | None:intergenic |
| ATACACAAGTGGCAATAGGT+AGG | 0.560586 | 8_3:-22130612 | None:intergenic |
| GGCATTGTCATATTTGGAGA+GGG | 0.565982 | 8_3:+22131032 | Msa1282010:CDS |
| CCCTATGGTTATGCGCCGCA+AGG | 0.567893 | 8_3:+22130651 | Msa1282010:CDS |
| TGTCACTCACAACATCCCTA+TGG | 0.570619 | 8_3:+22130636 | Msa1282010:CDS |
| CAATAGGTAGGGCAGTATAA+GGG | 0.571437 | 8_3:-22130600 | None:intergenic |
| CATAGTCTTTGATTTCCTTG+CGG | 0.572557 | 8_3:-22130666 | None:intergenic |
| GATCGTAAGTTTGCCGACAT+CGG | 0.574286 | 8_3:+22131719 | Msa1282010:CDS |
| ATTCTTAGAGGAAAATCAGA+AGG | 0.582001 | 8_3:+22130975 | Msa1282010:CDS |
| TTCAGCCGGTAACCTTGCCA+AGG | 0.587283 | 8_3:+22132086 | Msa1282010:CDS |
| AATACTTAGGGTTTGCCTCG+TGG | 0.591469 | 8_3:+22132033 | Msa1282010:intron |
| TACACAAGTGGCAATAGGTA+GGG | 0.593517 | 8_3:-22130611 | None:intergenic |
| AAGTAATCTCTGTTTGGCTG+CGG | 0.594715 | 8_3:+22131113 | Msa1282010:CDS |
| AAATTTGTCGGAGGACAGAA+GGG | 0.597712 | 8_3:-22130522 | None:intergenic |
| GGCCGAGGTATTACCGATGT+CGG | 0.597823 | 8_3:-22131732 | None:intergenic |
| TTTAGTTACTAGTGGAACAT+CGG | 0.598433 | 8_3:+22130750 | Msa1282010:CDS |
| GACATTATCATAGTCGGACG+TGG | 0.598657 | 8_3:+22133296 | Msa1282010:CDS |
| TTTCAGGTTATCCATGATAG+GGG | 0.599223 | 8_3:+22133269 | Msa1282010:intron |
| TATAAGGGACACCGCAGACA+AGG | 0.604577 | 8_3:-22130585 | None:intergenic |
| TATGCAAAATTGCAGTAACA+TGG | 0.604654 | 8_3:+22133475 | Msa1282010:three_prime_UTR |
| CACTTCTAAAGCCATTGAAG+GGG | 0.608981 | 8_3:+22130690 | Msa1282010:CDS |
| GCATTACCCTTCATACTGCA+TGG | 0.609301 | 8_3:-22131753 | None:intergenic |
| GGTAAGATATAATAAGGCGT+AGG | 0.610056 | 8_3:-22130501 | None:intergenic |
| CCTGGAGTTCAAATGGCGAT+CGG | 0.613183 | 8_3:+22132234 | Msa1282010:CDS |
| GGTAGTGACATTATCATAGT+CGG | 0.618352 | 8_3:+22133290 | Msa1282010:CDS |
| ATGCTTGCTGAAAACTCATG+TGG | 0.618767 | 8_3:+22131384 | Msa1282010:CDS |
| AGGCATTGTCATATTTGGAG+AGG | 0.619569 | 8_3:+22131031 | Msa1282010:CDS |
| CAGTGTAATCTCCCTTGGCA+AGG | 0.626881 | 8_3:-22132098 | None:intergenic |
| CCTCGGCCATGCAGTATGAA+GGG | 0.628115 | 8_3:+22131747 | Msa1282010:CDS |
| GGTGCAAACTTATGCAGCAG+CGG | 0.633352 | 8_3:+22128825 | Msa1282010:five_prime_UTR |
| ATGCACTCCATCCTTGAAGA+CGG | 0.634810 | 8_3:-22133361 | None:intergenic |
| ATTGCTTGAAATTGCCGACA+AGG | 0.638723 | 8_3:+22131155 | Msa1282010:CDS |
| AGTGCCCTAGACCACGACGC+TGG | 0.638835 | 8_3:-22132183 | None:intergenic |
| GAATTTAGTGTTGGAGACAG+AGG | 0.640768 | 8_3:-22130560 | None:intergenic |
| TTCAACCCTATGTTACGCAA+CGG | 0.641906 | 8_3:-22130790 | None:intergenic |
| GGAGTTCAAATGGCGATCGG+TGG | 0.647339 | 8_3:+22132237 | Msa1282010:CDS |
| TGCCGACATCGGTAATACCT+CGG | 0.647655 | 8_3:+22131730 | Msa1282010:CDS |
| TAGGTCTATGTAAATTGGTG+AGG | 0.648398 | 8_3:-22130482 | None:intergenic |
| ACTAAATTCGACCTTGTCTG+CGG | 0.652430 | 8_3:+22130574 | Msa1282010:CDS |
| TAGTTTGAGAAATTTGTCGG+AGG | 0.654215 | 8_3:-22130531 | None:intergenic |
| GGAGTTGCATGAATGAAACA+AGG | 0.667159 | 8_3:-22132213 | None:intergenic |
| TCAGCCGGTAACCTTGCCAA+GGG | 0.668243 | 8_3:+22132087 | Msa1282010:CDS |
| TGCAGCAGTGAAAATTGCTG+AGG | 0.668834 | 8_3:+22132122 | Msa1282010:CDS |
| TCTCGGTCAATCCAGCGTCG+TGG | 0.669937 | 8_3:+22132172 | Msa1282010:CDS |
| TTTCGGTTCTAAGCTTCGCG+CGG | 0.682835 | 8_3:+22131432 | Msa1282010:CDS |
| TTGATTGATAGAGAACAAGG+TGG | 0.705011 | 8_3:+22130832 | Msa1282010:CDS |
| GTGAGTGACAGATACACAAG+TGG | 0.716854 | 8_3:-22130623 | None:intergenic |
| AGCAACAAACCCTTTCCACG+AGG | 0.731068 | 8_3:-22132048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATAAAAAATATTAT+GGG | + | chr8_3:22132666-22132685 | Msa1282010:intron | 0.0% |
| !! | AAAACAATTTAACTATATTA+CGG | + | chr8_3:22129471-22129490 | Msa1282010:intron | 10.0% |
| !!! | TTTTTTATTTAGAAAATGAA+TGG | - | chr8_3:22132417-22132436 | None:intergenic | 10.0% |
| !! | AATTAGTTAAAAGTTAGTTA+CGG | + | chr8_3:22129302-22129321 | Msa1282010:intron | 15.0% |
| !! | AAACAATTTAACTATATTAC+GGG | + | chr8_3:22129472-22129491 | Msa1282010:intron | 15.0% |
| !!! | TGTTAGTATTAGTAATTTTA+TGG | - | chr8_3:22129671-22129690 | None:intergenic | 15.0% |
| !! | TAAAATGATGAATAATACTT+AGG | + | chr8_3:22132020-22132039 | Msa1282010:intron | 15.0% |
| !! | AAAATGATGAATAATACTTA+GGG | + | chr8_3:22132021-22132040 | Msa1282010:intron | 15.0% |
| !! | AAATTATTGAAAATGTATTG+CGG | + | chr8_3:22132734-22132753 | Msa1282010:intron | 15.0% |
| !!! | GAGATTTTTATTAATTAAAG+TGG | + | chr8_3:22132795-22132814 | Msa1282010:intron | 15.0% |
| !! | TTTCAATACTGAATATTAAA+GGG | - | chr8_3:22133095-22133114 | None:intergenic | 15.0% |
| !!! | TTTTCAATACTGAATATTAA+AGG | - | chr8_3:22133096-22133115 | None:intergenic | 15.0% |
| !! | ATTTATATTGTAGCTTATAG+CGG | + | chr8_3:22128959-22128978 | Msa1282010:intron | 20.0% |
| !! | ATTAGTTAAAAGTTAGTTAC+GGG | + | chr8_3:22129303-22129322 | Msa1282010:intron | 20.0% |
| !!! | TTGTTCTTAGAATTTTGATT+GGG | - | chr8_3:22129960-22129979 | None:intergenic | 20.0% |
| !!! | AGGAATTTTATGATTAAATC+TGG | + | chr8_3:22130110-22130129 | Msa1282010:intron | 20.0% |
| !! | AATTCTTAAATTGACTGAAA+TGG | + | chr8_3:22130894-22130913 | Msa1282010:CDS | 20.0% |
| !!! | GTGAAAATTTTGAAAGAAAA+AGG | + | chr8_3:22130916-22130935 | Msa1282010:CDS | 20.0% |
| !!! | AAATTTTGAAAGAAAAAGGA+AGG | + | chr8_3:22130920-22130939 | Msa1282010:CDS | 20.0% |
| !!! | AGTGTTCTTAATTTGAAATA+TGG | + | chr8_3:22131242-22131261 | Msa1282010:intron | 20.0% |
| !!! | TCTTAATTTGAAATATGGAT+TGG | + | chr8_3:22131247-22131266 | Msa1282010:intron | 20.0% |
| !!! | TTTGTATTTTCTTGTTTATC+AGG | + | chr8_3:22131348-22131367 | Msa1282010:intron | 20.0% |
| !! | TTATGATCATAATTCTTCTA+TGG | - | chr8_3:22131956-22131975 | None:intergenic | 20.0% |
| !! | AAAAATGAACCATCAATAAA+AGG | + | chr8_3:22132433-22132452 | Msa1282010:intron | 20.0% |
| !! | AAAATGAACCATCAATAAAA+GGG | + | chr8_3:22132434-22132453 | Msa1282010:intron | 20.0% |
| !!! | GATGTTAGATATAAAGATTT+TGG | - | chr8_3:22132526-22132545 | None:intergenic | 20.0% |
| !!! | TAATATTTTACTCATTTGTC+CGG | - | chr8_3:22132618-22132637 | None:intergenic | 20.0% |
| !! | CAACTGAAATGATAATATTT+AGG | - | chr8_3:22132699-22132718 | None:intergenic | 20.0% |
| !! | TTCAATACTGAATATTAAAG+GGG | - | chr8_3:22133094-22133113 | None:intergenic | 20.0% |
| !! | CAAAAAGGAATATAAATAAG+AGG | - | chr8_3:22133141-22133160 | None:intergenic | 20.0% |
| ! | TATGAAATGACGTAAAAAAG+AGG | + | chr8_3:22129046-22129065 | Msa1282010:intron | 25.0% |
| ! | ATGACTAAAAAAGACATGTT+TGG | - | chr8_3:22129222-22129241 | None:intergenic | 25.0% |
| !! | GATTTAACAAAGAGTTTGTT+TGG | - | chr8_3:22129282-22129301 | None:intergenic | 25.0% |
| ! | TTAGTTAAAAGTTAGTTACG+GGG | + | chr8_3:22129304-22129323 | Msa1282010:intron | 25.0% |
| ! | CTAGTAGATAAACTCAAATA+AGG | - | chr8_3:22129345-22129364 | None:intergenic | 25.0% |
| ! | TCCATGATAGTTTATGAAAA+TGG | + | chr8_3:22129433-22129452 | Msa1282010:intron | 25.0% |
| !! | ACCATTTTCATAAACTATCA+TGG | - | chr8_3:22129437-22129456 | None:intergenic | 25.0% |
| !!! | TTTACAGTTTTGATACATTC+AGG | - | chr8_3:22129547-22129566 | None:intergenic | 25.0% |
| !!! | GTCTGTTTTATTAGTCATTT+TGG | + | chr8_3:22129580-22129599 | Msa1282010:intron | 25.0% |
| ! | TTGCAATTTCGATACATTTA+AGG | + | chr8_3:22129712-22129731 | Msa1282010:intron | 25.0% |
| !!! | GTTGTTCTTAGAATTTTGAT+TGG | - | chr8_3:22129961-22129980 | None:intergenic | 25.0% |
| ! | TTCAATTATGCCTATAAACT+AGG | - | chr8_3:22129995-22130014 | None:intergenic | 25.0% |
| ! | TCATAGTTTGAGAAATTTGT+CGG | - | chr8_3:22130537-22130556 | None:intergenic | 25.0% |
| !! | AAATACAACTAAGTTGAAGA+AGG | + | chr8_3:22131011-22131030 | Msa1282010:CDS | 25.0% |
| ! | TAAAAAATTTCTCACCTTGT+CGG | - | chr8_3:22131172-22131191 | None:intergenic | 25.0% |
| !!! | GAAATTTTTTATTACAGCGA+TGG | + | chr8_3:22131181-22131200 | Msa1282010:intron | 25.0% |
| !!! | TATTTTCTTGTTTATCAGGT+TGG | + | chr8_3:22131352-22131371 | Msa1282010:intron | 25.0% |
| !!! | ATTTTCTTGTTTATCAGGTT+GGG | + | chr8_3:22131353-22131372 | Msa1282010:intron | 25.0% |
| !! | CAACATTTAACCAATTTTTG+AGG | + | chr8_3:22131608-22131627 | Msa1282010:intron | 25.0% |
| ! | ACACAACTTCTTAATATTTG+AGG | + | chr8_3:22131697-22131716 | Msa1282010:CDS | 25.0% |
| ! | GATCTTTCATATATTGGATT+GGG | + | chr8_3:22131866-22131885 | Msa1282010:CDS | 25.0% |
| ! | AAATGAACCATCAATAAAAG+GGG | + | chr8_3:22132435-22132454 | Msa1282010:intron | 25.0% |
| !!! | AGCACTTTACTTTTAACATT+TGG | + | chr8_3:22132562-22132581 | Msa1282010:intron | 25.0% |
| !!! | GCACTTTACTTTTAACATTT+GGG | + | chr8_3:22132563-22132582 | Msa1282010:intron | 25.0% |
| !! | AATATTTTACTCATTTGTCC+GGG | - | chr8_3:22132617-22132636 | None:intergenic | 25.0% |
| ! | TATGCAAGTTAAGTAAAGAA+GGG | - | chr8_3:22132961-22132980 | None:intergenic | 25.0% |
| ! | ATATGCAAGTTAAGTAAAGA+AGG | - | chr8_3:22132962-22132981 | None:intergenic | 25.0% |
| ! | AAATAAGAATGCAATGAGTT+TGG | - | chr8_3:22133007-22133026 | None:intergenic | 25.0% |
| !!! | TTCTTTGAAGTTGATTTATG+TGG | + | chr8_3:22133025-22133044 | Msa1282010:intron | 25.0% |
| ! | AACCTGAAAAAGAAAAACAT+TGG | - | chr8_3:22133258-22133277 | None:intergenic | 25.0% |
| !! | TATTTGGAAAAGTGCAATTA+AGG | + | chr8_3:22133383-22133402 | Msa1282010:CDS | 25.0% |
| ! | AACTTGCATTCAATATGATA+TGG | - | chr8_3:22133511-22133530 | None:intergenic | 25.0% |
| ! | TATCATATTGAATGCAAGTT+TGG | + | chr8_3:22133511-22133530 | Msa1282010:three_prime_UTR | 25.0% |
| ! | AATCACAACTCGAAATATTA+TGG | + | chr8_3:22133610-22133629 | Msa1282010:three_prime_UTR | 25.0% |
| TTCATAAACTATCATGGAGA+AGG | - | chr8_3:22129431-22129450 | None:intergenic | 30.0% | |
| ACTAATAAAACAGACACTTG+AGG | - | chr8_3:22129575-22129594 | None:intergenic | 30.0% | |
| ACAACCTAAAAACATATCTG+AGG | - | chr8_3:22129607-22129626 | None:intergenic | 30.0% | |
| AATTGCAAACATGTCTATCA+TGG | - | chr8_3:22129700-22129719 | None:intergenic | 30.0% | |
| TTCGATACATTTAAGGACTA+TGG | + | chr8_3:22129719-22129738 | Msa1282010:intron | 30.0% | |
| TCTCTAACAACCTAGTTTAT+AGG | + | chr8_3:22129982-22130001 | Msa1282010:intron | 30.0% | |
| ATAGGCATAATTGAATCAAG+TGG | + | chr8_3:22130000-22130019 | Msa1282010:intron | 30.0% | |
| CAGAAGGGTAAGATATAATA+AGG | - | chr8_3:22130510-22130529 | None:intergenic | 30.0% | |
| ATTGAGGATTTAGTTACTAG+TGG | + | chr8_3:22130742-22130761 | Msa1282010:CDS | 30.0% | |
| TTTAGTTACTAGTGGAACAT+CGG | + | chr8_3:22130750-22130769 | Msa1282010:CDS | 30.0% | |
| !!! | GTTTTGATTGATAGAGAACA+AGG | + | chr8_3:22130829-22130848 | Msa1282010:CDS | 30.0% |
| ATTCTTAGAGGAAAATCAGA+AGG | + | chr8_3:22130975-22130994 | Msa1282010:CDS | 30.0% | |
| TAAGTTGTCCAAAAATCCAA+TGG | + | chr8_3:22131056-22131075 | Msa1282010:CDS | 30.0% | |
| AAGTTGTCCAAAAATCCAAT+GGG | + | chr8_3:22131057-22131076 | Msa1282010:CDS | 30.0% | |
| ! | AAAGAGGTTGTTTGAGATAA+TGG | + | chr8_3:22131080-22131099 | Msa1282010:CDS | 30.0% |
| GTTCTCTTAAATATCATCGA+AGG | + | chr8_3:22131286-22131305 | Msa1282010:intron | 30.0% | |
| GTATGAAAGTCCTCAAAAAT+TGG | - | chr8_3:22131621-22131640 | None:intergenic | 30.0% | |
| GGATCTTTCATATATTGGAT+TGG | + | chr8_3:22131865-22131884 | Msa1282010:CDS | 30.0% | |
| ! | GATCATTCTGACTTTGTTAT+TGG | + | chr8_3:22132144-22132163 | Msa1282010:CDS | 30.0% |
| GTTGCAATACTTACAGAATA+TGG | - | chr8_3:22132291-22132310 | None:intergenic | 30.0% | |
| CATATGTGAAGGATCATATA+TGG | + | chr8_3:22132357-22132376 | Msa1282010:intron | 30.0% | |
| TTATCAATTGAGTACACTCT+TGG | + | chr8_3:22132473-22132492 | Msa1282010:intron | 30.0% | |
| !! | TATAAAGATTTTGGAGAGCT+CGG | - | chr8_3:22132517-22132536 | None:intergenic | 30.0% |
| ! | AAATCTCATCGATTGTAACA+TGG | - | chr8_3:22132824-22132843 | None:intergenic | 30.0% |
| ATGCAAGTTAAGTAAAGAAG+GGG | - | chr8_3:22132960-22132979 | None:intergenic | 30.0% | |
| ATACTGAATATTAAAGGGGT+GGG | - | chr8_3:22133090-22133109 | None:intergenic | 30.0% | |
| AATACTGAATATTAAAGGGG+TGG | - | chr8_3:22133091-22133110 | None:intergenic | 30.0% | |
| AGGAAAGAAATACTGCATTA+AGG | - | chr8_3:22133121-22133140 | None:intergenic | 30.0% | |
| ! | CACCAATGTTTTTCTTTTTC+AGG | + | chr8_3:22133253-22133272 | Msa1282010:intron | 30.0% |
| !!! | TTTTTCAGGTTATCCATGAT+AGG | + | chr8_3:22133267-22133286 | Msa1282010:intron | 30.0% |
| !!! | TTTTCAGGTTATCCATGATA+GGG | + | chr8_3:22133268-22133287 | Msa1282010:intron | 30.0% |
| TATGCAAAATTGCAGTAACA+TGG | + | chr8_3:22133475-22133494 | Msa1282010:three_prime_UTR | 30.0% | |
| ATAACTTCACACATAATGCT+TGG | - | chr8_3:22133561-22133580 | None:intergenic | 30.0% | |
| !! | TGCACCTTTTAAGTATACGA+TGG | - | chr8_3:22128811-22128830 | None:intergenic | 35.0% |
| ATGATTGAATTTGCACTGTC+TGG | + | chr8_3:22128991-22129010 | Msa1282010:intron | 35.0% | |
| ! | TTTTCAATTAAGATTGCCGC+CGG | + | chr8_3:22129092-22129111 | Msa1282010:intron | 35.0% |
| !! | ATCATCTCAGTTTTATACCC+CGG | - | chr8_3:22129114-22129133 | None:intergenic | 35.0% |
| ! | TGGTCCTCAGATATGTTTTT+AGG | + | chr8_3:22129600-22129619 | Msa1282010:intron | 35.0% |
| !!! | TCCTCGAATGTGTTTTTTGT+TGG | + | chr8_3:22129635-22129654 | Msa1282010:intron | 35.0% |
| ACCAACAAAAAACACATTCG+AGG | - | chr8_3:22129639-22129658 | None:intergenic | 35.0% | |
| CATACATTCAGCTACTCAAA+TGG | + | chr8_3:22129759-22129778 | Msa1282010:intron | 35.0% | |
| TGCTTTCATGTCAAAGCTAT+CGG | + | chr8_3:22129802-22129821 | Msa1282010:intron | 35.0% | |
| TATCTCATCTCATCCAATGT+GGG | - | chr8_3:22129888-22129907 | None:intergenic | 35.0% | |
| ATATCTCATCTCATCCAATG+TGG | - | chr8_3:22129889-22129908 | None:intergenic | 35.0% | |
| TCCACTTATAAACAGGTTGT+CGG | - | chr8_3:22129915-22129934 | None:intergenic | 35.0% | |
| !! | GAAGCAGAGTACTTTTAGTA+AGG | + | chr8_3:22130057-22130076 | Msa1282010:intron | 35.0% |
| CTGATTCCTCACATCATAAA+GGG | - | chr8_3:22130092-22130111 | None:intergenic | 35.0% | |
| ! | AACAATCAGTGTCATTCAGT+GGG | - | chr8_3:22130339-22130358 | None:intergenic | 35.0% |
| ! | AATGACACTGATTGTTCTGA+AGG | + | chr8_3:22130343-22130362 | Msa1282010:intron | 35.0% |
| ATTTGACAGCTGAGATATCA+TGG | - | chr8_3:22130432-22130451 | None:intergenic | 35.0% | |
| GATATCTCAGCTGTCAAATT+TGG | + | chr8_3:22130433-22130452 | Msa1282010:CDS | 35.0% | |
| GGAAACTTCAAGCTTAAATC+CGG | + | chr8_3:22130454-22130473 | Msa1282010:CDS | 35.0% | |
| TAGGTCTATGTAAATTGGTG+AGG | - | chr8_3:22130485-22130504 | None:intergenic | 35.0% | |
| GGTAAGATATAATAAGGCGT+AGG | - | chr8_3:22130504-22130523 | None:intergenic | 35.0% | |
| TAGTTTGAGAAATTTGTCGG+AGG | - | chr8_3:22130534-22130553 | None:intergenic | 35.0% | |
| ! | CATAGTCTTTGATTTCCTTG+CGG | - | chr8_3:22130669-22130688 | None:intergenic | 35.0% |
| ATGCTTAAAATCCCCTTCAA+TGG | - | chr8_3:22130704-22130723 | None:intergenic | 35.0% | |
| ! | ATTGAAGGGGATTTTAAGCA+TGG | + | chr8_3:22130703-22130722 | Msa1282010:CDS | 35.0% |
| CCTCAATTACCAAACAACTT+TGG | - | chr8_3:22130729-22130748 | None:intergenic | 35.0% | |
| ! | CCAAAGTTGTTTGGTAATTG+AGG | + | chr8_3:22130726-22130745 | Msa1282010:CDS | 35.0% |
| TTGATTGATAGAGAACAAGG+TGG | + | chr8_3:22130832-22130851 | Msa1282010:CDS | 35.0% | |
| GGTTGTTATGAGATTCTTAG+AGG | + | chr8_3:22130963-22130982 | Msa1282010:CDS | 35.0% | |
| !! | GAAGAAGGCATTGTCATATT+TGG | + | chr8_3:22131026-22131045 | Msa1282010:CDS | 35.0% |
| GAAGGAAAGTAATCTCTGTT+TGG | + | chr8_3:22131107-22131126 | Msa1282010:CDS | 35.0% | |
| TATCATCGAAGGTTGAAGTT+TGG | + | chr8_3:22131297-22131316 | Msa1282010:intron | 35.0% | |
| ! | CCAGATTTTACTCCAGATTT+CGG | + | chr8_3:22131415-22131434 | Msa1282010:CDS | 35.0% |
| GTATCAGTATGCAATACTCA+GGG | - | chr8_3:22131484-22131503 | None:intergenic | 35.0% | |
| AGTATCAGTATGCAATACTC+AGG | - | chr8_3:22131485-22131504 | None:intergenic | 35.0% | |
| ! | ACACGTTACACTCTTTTTGT+AGG | - | chr8_3:22131579-22131598 | None:intergenic | 35.0% |
| TGAGGACTTTCATACATTTC+TGG | + | chr8_3:22131626-22131645 | Msa1282010:intron | 35.0% | |
| TGAATGCAGAAACAGATGAA+AGG | - | chr8_3:22131812-22131831 | None:intergenic | 35.0% | |
| TCTGCAGACAACATAAAAGA+AGG | - | chr8_3:22131844-22131863 | None:intergenic | 35.0% | |
| ! | TTCTTTTATGTTGTCTGCAG+AGG | + | chr8_3:22131843-22131862 | Msa1282010:intron | 35.0% |
| ! | TCTTTTATGTTGTCTGCAGA+GGG | + | chr8_3:22131844-22131863 | Msa1282010:intron | 35.0% |
| CAGAGGGATCTTTCATATAT+TGG | + | chr8_3:22131860-22131879 | Msa1282010:intron | 35.0% | |
| GTAAATGCTCACATTATCTC+TGG | + | chr8_3:22131897-22131916 | Msa1282010:CDS | 35.0% | |
| !! | TGTGGATGGACTGAAATTAA+AGG | + | chr8_3:22131929-22131948 | Msa1282010:CDS | 35.0% |
| !! | CTTTGTTATTGGCTTCATCT+CGG | + | chr8_3:22132155-22132174 | Msa1282010:CDS | 35.0% |
| TGGTAATTAGCAATGCTTAC+AGG | - | chr8_3:22132315-22132334 | None:intergenic | 35.0% | |
| ! | CACATATGAGCATAGACTTT+TGG | - | chr8_3:22132345-22132364 | None:intergenic | 35.0% |
| AAGTCTATGCTCATATGTGA+AGG | + | chr8_3:22132346-22132365 | Msa1282010:intron | 35.0% | |
| ! | TACTGATCCCCTTTTATTGA+TGG | - | chr8_3:22132445-22132464 | None:intergenic | 35.0% |
| ! | GTAAAGTGCTTCATAGATGT+TGG | - | chr8_3:22132552-22132571 | None:intergenic | 35.0% |
| GATTTGAACCATTTACCTTG+AGG | + | chr8_3:22132839-22132858 | Msa1282010:intron | 35.0% | |
| TCCAAATCCTAGTAGGATAA+GGG | - | chr8_3:22132931-22132950 | None:intergenic | 35.0% | |
| ATCCAAATCCTAGTAGGATA+AGG | - | chr8_3:22132932-22132951 | None:intergenic | 35.0% | |
| GGAAAAATCCAAATCCTAGT+AGG | - | chr8_3:22132938-22132957 | None:intergenic | 35.0% | |
| TGCAAGTTAAGTAAAGAAGG+GGG | - | chr8_3:22132959-22132978 | None:intergenic | 35.0% | |
| !! | TTTCAGGTTATCCATGATAG+GGG | + | chr8_3:22133269-22133288 | Msa1282010:intron | 35.0% |
| GGTAGTGACATTATCATAGT+CGG | + | chr8_3:22133290-22133309 | Msa1282010:CDS | 35.0% | |
| TATCATCAAAGCAGCAAATC+CGG | + | chr8_3:22133319-22133338 | Msa1282010:CDS | 35.0% | |
| CAAACTCTTCCATTTGGTTA+GGG | - | chr8_3:22133417-22133436 | None:intergenic | 35.0% | |
| CTAACCAAATGGAAGAGTTT+GGG | + | chr8_3:22133416-22133435 | Msa1282010:three_prime_UTR | 35.0% | |
| TCAATATGATATGGATGTGC+AGG | - | chr8_3:22133502-22133521 | None:intergenic | 35.0% | |
| ! | GTGATTGCAATTTTGTCACT+AGG | - | chr8_3:22133596-22133615 | None:intergenic | 35.0% |
| CTCGCCATCGTATACTTAAA+AGG | + | chr8_3:22128804-22128823 | Msa1282010:five_prime_UTR | 40.0% | |
| TTTCAATTAAGATTGCCGCC+GGG | + | chr8_3:22129093-22129112 | Msa1282010:intron | 40.0% | |
| ! | TTACGGGTAAACCACCATTT+TGG | + | chr8_3:22129488-22129507 | Msa1282010:intron | 40.0% |
| ! | TACACTTTGAGGGACCAAAA+TGG | - | chr8_3:22129505-22129524 | None:intergenic | 40.0% |
| GCTTTCATGTCAAAGCTATC+GGG | + | chr8_3:22129803-22129822 | Msa1282010:intron | 40.0% | |
| TATCCAGTCCTATGTGTTAG+AGG | + | chr8_3:22129847-22129866 | Msa1282010:intron | 40.0% | |
| ATCCAGTCCTATGTGTTAGA+GGG | + | chr8_3:22129848-22129867 | Msa1282010:intron | 40.0% | |
| CCACTTATAAACAGGTTGTC+GGG | - | chr8_3:22129914-22129933 | None:intergenic | 40.0% | |
| GACAACCTGTTTATAAGTGG+AGG | + | chr8_3:22129914-22129933 | Msa1282010:intron | 40.0% | |
| GATTGGGCTCTTTATAAGTG+AGG | - | chr8_3:22129944-22129963 | None:intergenic | 40.0% | |
| TGTCATCCCTTTATGATGTG+AGG | + | chr8_3:22130083-22130102 | Msa1282010:intron | 40.0% | |
| CCTGATTCCTCACATCATAA+AGG | - | chr8_3:22130093-22130112 | None:intergenic | 40.0% | |
| CCTTTATGATGTGAGGAATC+AGG | + | chr8_3:22130090-22130109 | Msa1282010:intron | 40.0% | |
| ATCGTATCGCAGAACAATAG+CGG | + | chr8_3:22130237-22130256 | Msa1282010:intron | 40.0% | |
| ! | GAACAATCAGTGTCATTCAG+TGG | - | chr8_3:22130340-22130359 | None:intergenic | 40.0% |
| TCCTTAAAGCTCACTGAGAA+AGG | + | chr8_3:22130376-22130395 | Msa1282010:five_prime_UTR | 40.0% | |
| AGGCGTAGGTCTATGTAAAT+TGG | - | chr8_3:22130490-22130509 | None:intergenic | 40.0% | |
| AAATTTGTCGGAGGACAGAA+GGG | - | chr8_3:22130525-22130544 | None:intergenic | 40.0% | |
| ! | GAATTTAGTGTTGGAGACAG+AGG | - | chr8_3:22130563-22130582 | None:intergenic | 40.0% |
| GACAAGGTCGAATTTAGTGT+TGG | - | chr8_3:22130572-22130591 | None:intergenic | 40.0% | |
| ACTAAATTCGACCTTGTCTG+CGG | + | chr8_3:22130574-22130593 | Msa1282010:CDS | 40.0% | |
| CAATAGGTAGGGCAGTATAA+GGG | - | chr8_3:22130603-22130622 | None:intergenic | 40.0% | |
| TACACAAGTGGCAATAGGTA+GGG | - | chr8_3:22130614-22130633 | None:intergenic | 40.0% | |
| ATACACAAGTGGCAATAGGT+AGG | - | chr8_3:22130615-22130634 | None:intergenic | 40.0% | |
| ACAGATACACAAGTGGCAAT+AGG | - | chr8_3:22130619-22130638 | None:intergenic | 40.0% | |
| CGCAAGGAAATCAAAGACTA+TGG | + | chr8_3:22130667-22130686 | Msa1282010:CDS | 40.0% | |
| !! | GCACTTCTAAAGCCATTGAA+GGG | + | chr8_3:22130689-22130708 | Msa1282010:CDS | 40.0% |
| !! | CACTTCTAAAGCCATTGAAG+GGG | + | chr8_3:22130690-22130709 | Msa1282010:CDS | 40.0% |
| TAAGCATGGCCAAAGTTGTT+TGG | + | chr8_3:22130717-22130736 | Msa1282010:CDS | 40.0% | |
| !!! | TACTAGTGGAACATCGGTTT+TGG | + | chr8_3:22130756-22130775 | Msa1282010:CDS | 40.0% |
| TTCAACCCTATGTTACGCAA+CGG | - | chr8_3:22130793-22130812 | None:intergenic | 40.0% | |
| AGAGAGAATCTGGAGAGTAA+TGG | + | chr8_3:22130856-22130875 | Msa1282010:CDS | 40.0% | |
| AGAAAAAGGAAGGCTTGATG+AGG | + | chr8_3:22130930-22130949 | Msa1282010:CDS | 40.0% | |
| ! | AAATCAGAAGGTTGCTGCTT+TGG | + | chr8_3:22130987-22131006 | Msa1282010:CDS | 40.0% |
| ! | AGGCATTGTCATATTTGGAG+AGG | + | chr8_3:22131031-22131050 | Msa1282010:CDS | 40.0% |
| GGCATTGTCATATTTGGAGA+GGG | + | chr8_3:22131032-22131051 | Msa1282010:CDS | 40.0% | |
| ! | CCTCTTTCCCATTGGATTTT+TGG | - | chr8_3:22131067-22131086 | None:intergenic | 40.0% |
| CCAAAAATCCAATGGGAAAG+AGG | + | chr8_3:22131064-22131083 | Msa1282010:CDS | 40.0% | |
| TCAAACAACCTCTTTCCCAT+TGG | - | chr8_3:22131075-22131094 | None:intergenic | 40.0% | |
| ! | GTTTGAGATAATGGCTGAGA+AGG | + | chr8_3:22131089-22131108 | Msa1282010:CDS | 40.0% |
| AAGTAATCTCTGTTTGGCTG+CGG | + | chr8_3:22131113-22131132 | Msa1282010:CDS | 40.0% | |
| ATTGCTTGAAATTGCCGACA+AGG | + | chr8_3:22131155-22131174 | Msa1282010:CDS | 40.0% | |
| ! | ATGCTTGCTGAAAACTCATG+TGG | + | chr8_3:22131384-22131403 | Msa1282010:CDS | 40.0% |
| ! | CCGAAATCTGGAGTAAAATC+TGG | - | chr8_3:22131418-22131437 | None:intergenic | 40.0% |
| TATGAAGGGTAATGCATTGC+TGG | + | chr8_3:22131761-22131780 | Msa1282010:intron | 40.0% | |
| GGAGTTGCATGAATGAAACA+AGG | - | chr8_3:22132216-22132235 | None:intergenic | 40.0% | |
| TGTTTCATTCATGCAACTCC+TGG | + | chr8_3:22132216-22132235 | Msa1282010:CDS | 40.0% | |
| !! | CATAGACTTTTGGAGACAGT+TGG | - | chr8_3:22132335-22132354 | None:intergenic | 40.0% |
| CATTTGGGTCTACTCTATGA+AGG | + | chr8_3:22132578-22132597 | Msa1282010:intron | 40.0% | |
| ! | TATTGCGGCTTTGATTCACT+TGG | + | chr8_3:22132749-22132768 | Msa1282010:intron | 40.0% |
| ! | TCACTTGGCAAGCCAATTTT+TGG | + | chr8_3:22132764-22132783 | Msa1282010:intron | 40.0% |
| ! | CACTTGGCAAGCCAATTTTT+GGG | + | chr8_3:22132765-22132784 | Msa1282010:intron | 40.0% |
| ! | ACTTGGCAAGCCAATTTTTG+GGG | + | chr8_3:22132766-22132785 | Msa1282010:intron | 40.0% |
| CCATGTAACCTCAAGGTAAA+TGG | - | chr8_3:22132850-22132869 | None:intergenic | 40.0% | |
| CCATTTACCTTGAGGTTACA+TGG | + | chr8_3:22132847-22132866 | Msa1282010:intron | 40.0% | |
| TAACCAACCCTTATCCTACT+AGG | + | chr8_3:22132921-22132940 | Msa1282010:intron | 40.0% | |
| AATCCTAGTAGGATAAGGGT+TGG | - | chr8_3:22132927-22132946 | None:intergenic | 40.0% | |
| ACCCTTATCCTACTAGGATT+TGG | + | chr8_3:22132927-22132946 | Msa1282010:intron | 40.0% | |
| TTATGTGGCATGCAGTAACT+AGG | + | chr8_3:22133040-22133059 | Msa1282010:intron | 40.0% | |
| GAGTGTGTGAAGCAACAAAA+AGG | - | chr8_3:22133156-22133175 | None:intergenic | 40.0% | |
| ACAACCTTATCCCACTAACT+TGG | + | chr8_3:22133209-22133228 | Msa1282010:intron | 40.0% | |
| CAACCTTATCCCACTAACTT+GGG | + | chr8_3:22133210-22133229 | Msa1282010:intron | 40.0% | |
| TAATGTCACTACCCCTATCA+TGG | - | chr8_3:22133283-22133302 | None:intergenic | 40.0% | |
| TCAAGGATGGAGTGCATATT+TGG | + | chr8_3:22133367-22133386 | Msa1282010:CDS | 40.0% | |
| GCTTGTATTCCCTAACCAAA+TGG | + | chr8_3:22133405-22133424 | Msa1282010:three_prime_UTR | 40.0% | |
| CCAAACTCTTCCATTTGGTT+AGG | - | chr8_3:22133418-22133437 | None:intergenic | 40.0% | |
| CCTAACCAAATGGAAGAGTT+TGG | + | chr8_3:22133415-22133434 | Msa1282010:three_prime_UTR | 40.0% | |
| TTCAATTAAGATTGCCGCCG+GGG | + | chr8_3:22129094-22129113 | Msa1282010:intron | 45.0% | |
| !! | ATCTCAGTTTTATACCCCGG+CGG | - | chr8_3:22129111-22129130 | None:intergenic | 45.0% |
| TTAGTTACGGGGAGAACGTT+TGG | + | chr8_3:22129315-22129334 | Msa1282010:intron | 45.0% | |
| ! | ACTTTGAGGGACCAAAATGG+TGG | - | chr8_3:22129502-22129521 | None:intergenic | 45.0% |
| GACAGCGAGTTACACTTTGA+GGG | - | chr8_3:22129515-22129534 | None:intergenic | 45.0% | |
| TGACAGCGAGTTACACTTTG+AGG | - | chr8_3:22129516-22129535 | None:intergenic | 45.0% | |
| AGTGTAACTCGCTGTCACAT+TGG | + | chr8_3:22129519-22129538 | Msa1282010:intron | 45.0% | |
| TCCAGTCCTATGTGTTAGAG+GGG | + | chr8_3:22129849-22129868 | Msa1282010:intron | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+TGG | + | chr8_3:22129872-22129891 | Msa1282010:intron | 45.0% | |
| CCCGACAACCTGTTTATAAG+TGG | + | chr8_3:22129911-22129930 | Msa1282010:intron | 45.0% | |
| GACTGCCTCCACTTATAAAC+AGG | - | chr8_3:22129922-22129941 | None:intergenic | 45.0% | |
| CTTCCACTTCTCATGCACTT+GGG | - | chr8_3:22130041-22130060 | None:intergenic | 45.0% | |
| GCCTTTCTCAGTGAGCTTTA+AGG | - | chr8_3:22130380-22130399 | None:intergenic | 45.0% | |
| ! | CACTGAGAAAGGCACATCAA+TGG | + | chr8_3:22130387-22130406 | Msa1282010:exon | 45.0% |
| GTAAATTGGTGAGGAGATGC+CGG | - | chr8_3:22130476-22130495 | None:intergenic | 45.0% | |
| GAAATTTGTCGGAGGACAGA+AGG | - | chr8_3:22130526-22130545 | None:intergenic | 45.0% | |
| GCAATAGGTAGGGCAGTATA+AGG | - | chr8_3:22130604-22130623 | None:intergenic | 45.0% | |
| GTGAGTGACAGATACACAAG+TGG | - | chr8_3:22130626-22130645 | None:intergenic | 45.0% | |
| TGTCACTCACAACATCCCTA+TGG | + | chr8_3:22130636-22130655 | Msa1282010:CDS | 45.0% | |
| !! | GGCACTTCTAAAGCCATTGA+AGG | + | chr8_3:22130688-22130707 | Msa1282010:CDS | 45.0% |
| GTTGCGTAACATAGGGTTGA+AGG | + | chr8_3:22130792-22130811 | Msa1282010:CDS | 45.0% | |
| ACAAGGTGGAAGAGAGAATC+TGG | + | chr8_3:22130846-22130865 | Msa1282010:CDS | 45.0% | |
| GCTTGATGAGGAGATGGTTA+GGG | + | chr8_3:22130942-22130961 | Msa1282010:CDS | 45.0% | |
| CGAAGCTTAGAACCGAAATC+TGG | - | chr8_3:22131430-22131449 | None:intergenic | 45.0% | |
| GATCGTAAGTTTGCCGACAT+CGG | + | chr8_3:22131719-22131738 | Msa1282010:CDS | 45.0% | |
| GCATTACCCTTCATACTGCA+TGG | - | chr8_3:22131756-22131775 | None:intergenic | 45.0% | |
| TATCTCTGGTCCTGGAATTG+TGG | + | chr8_3:22131911-22131930 | Msa1282010:CDS | 45.0% | |
| TTCAGTCCATCCACAATTCC+AGG | - | chr8_3:22131924-22131943 | None:intergenic | 45.0% | |
| AATACTTAGGGTTTGCCTCG+TGG | + | chr8_3:22132033-22132052 | Msa1282010:intron | 45.0% | |
| CTTGCTGAAATGAGTTCAGC+CGG | + | chr8_3:22132072-22132091 | Msa1282010:CDS | 45.0% | |
| TGCAGCAGTGAAAATTGCTG+AGG | + | chr8_3:22132122-22132141 | Msa1282010:CDS | 45.0% | |
| TGCAACTCCTGGAGTTCAAA+TGG | + | chr8_3:22132227-22132246 | Msa1282010:CDS | 45.0% | |
| GTCTACTCTATGAAGGTCCT+GGG | + | chr8_3:22132585-22132604 | Msa1282010:intron | 45.0% | |
| !! | ATTTGTCCGGGTTTTAACCC+AGG | - | chr8_3:22132605-22132624 | None:intergenic | 45.0% |
| !! | GCAAGCCAATTTTTGGGGAA+GGG | + | chr8_3:22132771-22132790 | Msa1282010:intron | 45.0% |
| !! | CAAGCCAATTTTTGGGGAAG+GGG | + | chr8_3:22132772-22132791 | Msa1282010:intron | 45.0% |
| !! | AAGCCAATTTTTGGGGAAGG+GGG | + | chr8_3:22132773-22132792 | Msa1282010:intron | 45.0% |
| AGCTTAGCCATGTAACCTCA+AGG | - | chr8_3:22132857-22132876 | None:intergenic | 45.0% | |
| TACTACTGAGCTAGCATCTC+AGG | + | chr8_3:22132879-22132898 | Msa1282010:intron | 45.0% | |
| CTGAATATTAAAGGGGTGGG+TGG | - | chr8_3:22133087-22133106 | None:intergenic | 45.0% | |
| ! | GTGGGATAAGGTTGTTGTTG+TGG | - | chr8_3:22133204-22133223 | None:intergenic | 45.0% |
| CTTATCCCACTAACTTGGGT+CGG | + | chr8_3:22133214-22133233 | Msa1282010:intron | 45.0% | |
| GACATTATCATAGTCGGACG+TGG | + | chr8_3:22133296-22133315 | Msa1282010:CDS | 45.0% | |
| ATGCACTCCATCCTTGAAGA+CGG | - | chr8_3:22133364-22133383 | None:intergenic | 45.0% | |
| CACACCCAAACTCTTCCATT+TGG | - | chr8_3:22133423-22133442 | None:intergenic | 45.0% | |
| !! | CATTAAAATAAAAAATATTA+TGG | + | chr8_3:22132665-22132684 | Msa1282010:intron | 5.0% |
| !! | TTAAAATAAAAAATATTATG+GGG | + | chr8_3:22132667-22132686 | Msa1282010:intron | 5.0% |
| GGTGCAAACTTATGCAGCAG+CGG | + | chr8_3:22128825-22128844 | Msa1282010:five_prime_UTR | 50.0% | |
| ATGCAGCAGCGGCAATAACA+AGG | + | chr8_3:22128836-22128855 | Msa1282010:five_prime_UTR | 50.0% | |
| TCAAAGCTATCGGGTCACTC+AGG | + | chr8_3:22129812-22129831 | Msa1282010:intron | 50.0% | |
| CCAGTCCTATGTGTTAGAGG+GGG | + | chr8_3:22129850-22129869 | Msa1282010:intron | 50.0% | |
| ACACACCCCCTCTAACACAT+AGG | - | chr8_3:22129858-22129877 | None:intergenic | 50.0% | |
| TTCTCATGCACTTGGGCACA+TGG | - | chr8_3:22130034-22130053 | None:intergenic | 50.0% | |
| GCTTCCACTTCTCATGCACT+TGG | - | chr8_3:22130042-22130061 | None:intergenic | 50.0% | |
| TATAAGGGACACCGCAGACA+AGG | - | chr8_3:22130588-22130607 | None:intergenic | 50.0% | |
| AGGAAGGCTTGATGAGGAGA+TGG | + | chr8_3:22130936-22130955 | Msa1282010:CDS | 50.0% | |
| GGCTTGATGAGGAGATGGTT+AGG | + | chr8_3:22130941-22130960 | Msa1282010:CDS | 50.0% | |
| !! | TTTCGGTTCTAAGCTTCGCG+CGG | + | chr8_3:22131432-22131451 | Msa1282010:CDS | 50.0% |
| TGCCGACATCGGTAATACCT+CGG | + | chr8_3:22131730-22131749 | Msa1282010:CDS | 50.0% | |
| GCTCACATTATCTCTGGTCC+TGG | + | chr8_3:22131903-22131922 | Msa1282010:CDS | 50.0% | |
| TCTGGTCCTGGAATTGTGGA+TGG | + | chr8_3:22131915-22131934 | Msa1282010:CDS | 50.0% | |
| TTAGGGTTTGCCTCGTGGAA+AGG | + | chr8_3:22132038-22132057 | Msa1282010:intron | 50.0% | |
| TAGGGTTTGCCTCGTGGAAA+GGG | + | chr8_3:22132039-22132058 | Msa1282010:intron | 50.0% | |
| AGCAACAAACCCTTTCCACG+AGG | - | chr8_3:22132051-22132070 | None:intergenic | 50.0% | |
| ATCTCCCTTGGCAAGGTTAC+CGG | - | chr8_3:22132094-22132113 | None:intergenic | 50.0% | |
| CAGTGTAATCTCCCTTGGCA+AGG | - | chr8_3:22132101-22132120 | None:intergenic | 50.0% | |
| TGCAGCAGTGTAATCTCCCT+TGG | - | chr8_3:22132106-22132125 | None:intergenic | 50.0% | |
| CCTGGAGTTCAAATGGCGAT+CGG | + | chr8_3:22132234-22132253 | Msa1282010:CDS | 50.0% | |
| GGTCTACTCTATGAAGGTCC+TGG | + | chr8_3:22132584-22132603 | Msa1282010:intron | 50.0% | |
| GAAGGTCCTGGGTTAAAACC+CGG | + | chr8_3:22132596-22132615 | Msa1282010:intron | 50.0% | |
| !! | GGCAAGCCAATTTTTGGGGA+AGG | + | chr8_3:22132770-22132789 | Msa1282010:intron | 50.0% |
| TCTCCCCCTTCCCCAAAAAT+TGG | - | chr8_3:22132779-22132798 | None:intergenic | 50.0% | |
| GGCATGCAGTAACTAGGTTG+TGG | + | chr8_3:22133046-22133065 | Msa1282010:intron | 50.0% | |
| CGACCCAAGTTAGTGGGATA+AGG | - | chr8_3:22133216-22133235 | None:intergenic | 50.0% | |
| GATAGCCGACCCAAGTTAGT+GGG | - | chr8_3:22133222-22133241 | None:intergenic | 50.0% | |
| AGATAGCCGACCCAAGTTAG+TGG | - | chr8_3:22133223-22133242 | None:intergenic | 50.0% | |
| GCGAATACCGTCTTCAAGGA+TGG | + | chr8_3:22133354-22133373 | Msa1282010:CDS | 50.0% | |
| CCCCCTCTAACACATAGGAC+TGG | - | chr8_3:22129853-22129872 | None:intergenic | 55.0% | |
| GTGCCCAAGTGCATGAGAAG+TGG | + | chr8_3:22130035-22130054 | Msa1282010:intron | 55.0% | |
| CCTTGCGGCGCATAACCATA+GGG | - | chr8_3:22130654-22130673 | None:intergenic | 55.0% | |
| TCCTTGCGGCGCATAACCAT+AGG | - | chr8_3:22130655-22130674 | None:intergenic | 55.0% | |
| CTGCGCCGTTGCGTAACATA+GGG | + | chr8_3:22130785-22130804 | Msa1282010:CDS | 55.0% | |
| CTCTGTTTGGCTGCGGATGT+TGG | + | chr8_3:22131120-22131139 | Msa1282010:CDS | 55.0% | |
| ! | GGCCGAGGTATTACCGATGT+CGG | - | chr8_3:22131735-22131754 | None:intergenic | 55.0% |
| ACCTCGGCCATGCAGTATGA+AGG | + | chr8_3:22131746-22131765 | Msa1282010:CDS | 55.0% | |
| CCTCGGCCATGCAGTATGAA+GGG | + | chr8_3:22131747-22131766 | Msa1282010:CDS | 55.0% | |
| TTCAGCCGGTAACCTTGCCA+AGG | + | chr8_3:22132086-22132105 | Msa1282010:CDS | 55.0% | |
| TCAGCCGGTAACCTTGCCAA+GGG | + | chr8_3:22132087-22132106 | Msa1282010:CDS | 55.0% | |
| TCAATCCAGCGTCGTGGTCT+AGG | + | chr8_3:22132178-22132197 | Msa1282010:CDS | 55.0% | |
| CAATCCAGCGTCGTGGTCTA+GGG | + | chr8_3:22132179-22132198 | Msa1282010:CDS | 55.0% | |
| CCGATCGCCATTTGAACTCC+AGG | - | chr8_3:22132237-22132256 | None:intergenic | 55.0% | |
| GGAGTTCAAATGGCGATCGG+TGG | + | chr8_3:22132237-22132256 | Msa1282010:CDS | 55.0% | |
| CAAATGGCGATCGGTGGTGA+TGG | + | chr8_3:22132243-22132262 | Msa1282010:CDS | 55.0% | |
| !! | GCGATCGGTGGTGATGGTTT+GGG | + | chr8_3:22132249-22132268 | Msa1282010:CDS | 55.0% |
| !! | CGATCGGTGGTGATGGTTTG+GGG | + | chr8_3:22132250-22132269 | Msa1282010:CDS | 55.0% |
| GCTCGCGAATACCGTCTTCA+AGG | + | chr8_3:22133350-22133369 | Msa1282010:CDS | 55.0% | |
| CCCTATGGTTATGCGCCGCA+AGG | + | chr8_3:22130651-22130670 | Msa1282010:CDS | 60.0% | |
| GCTGCGCCGTTGCGTAACAT+AGG | + | chr8_3:22130784-22130803 | Msa1282010:CDS | 60.0% | |
| CCCTTCATACTGCATGGCCG+AGG | - | chr8_3:22131750-22131769 | None:intergenic | 60.0% | |
| TCTCGGTCAATCCAGCGTCG+TGG | + | chr8_3:22132172-22132191 | Msa1282010:CDS | 60.0% | |
| !! | GGCGATCGGTGGTGATGGTT+TGG | + | chr8_3:22132248-22132267 | Msa1282010:CDS | 60.0% |
| TATTCGCGAGCTGCTGCAGC+CGG | - | chr8_3:22133341-22133360 | None:intergenic | 60.0% | |
| AGTGCCCTAGACCACGACGC+TGG | - | chr8_3:22132186-22132205 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 22128787 | 22133664 | 22128787 | ID=Msa1282010;Name=Msa1282010 |
| chr8_3 | mRNA | 22128787 | 22133664 | 22128787 | ID=Msa1282010-mRNA-1;Parent=Msa1282010;Name=Msa1282010-mRNA-1;_AED=0.02;_eAED=0.02;_QI=112|0.83|0.85|1|0.83|0.71|7|261|475 |
| chr8_3 | exon | 22128787 | 22128857 | 22128787 | ID=Msa1282010-mRNA-1:exon:7944;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22130365 | 22131176 | 22130365 | ID=Msa1282010-mRNA-1:exon:7945;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22131370 | 22131453 | 22131370 | ID=Msa1282010-mRNA-1:exon:7946;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22131686 | 22131768 | 22131686 | ID=Msa1282010-mRNA-1:exon:7947;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22131863 | 22131950 | 22131863 | ID=Msa1282010-mRNA-1:exon:7948;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22132042 | 22132314 | 22132042 | ID=Msa1282010-mRNA-1:exon:7949;Parent=Msa1282010-mRNA-1 |
| chr8_3 | exon | 22133275 | 22133664 | 22133275 | ID=Msa1282010-mRNA-1:exon:7950;Parent=Msa1282010-mRNA-1 |
| chr8_3 | five_prime_UTR | 22128787 | 22128857 | 22128787 | ID=Msa1282010-mRNA-1:five_prime_utr;Parent=Msa1282010-mRNA-1 |
| chr8_3 | five_prime_UTR | 22130365 | 22130405 | 22130365 | ID=Msa1282010-mRNA-1:five_prime_utr;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22130406 | 22131176 | 22130406 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22131370 | 22131453 | 22131370 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22131686 | 22131768 | 22131686 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22131863 | 22131950 | 22131863 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22132042 | 22132314 | 22132042 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | CDS | 22133275 | 22133403 | 22133275 | ID=Msa1282010-mRNA-1:cds;Parent=Msa1282010-mRNA-1 |
| chr8_3 | three_prime_UTR | 22133404 | 22133664 | 22133404 | ID=Msa1282010-mRNA-1:three_prime_utr;Parent=Msa1282010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
