Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240540 | XP_003627796.1 | 97.015 | 469 | 14 | 0 | 1 | 469 | 1 | 469 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240540 | sp|Q42586|UMPS_ARATH | 75.212 | 472 | 114 | 2 | 1 | 469 | 4 | 475 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027540 | Msa1240540 | 0.800250 | 1.574004e-48 | -8.615850e-47 |
| Msa0032120 | Msa1240540 | 0.820425 | 6.905967e-53 | -8.615850e-47 |
| Msa0063580 | Msa1240540 | 0.801078 | 1.066764e-48 | -8.615850e-47 |
| Msa0075310 | Msa1240540 | 0.800711 | 1.267801e-48 | -8.615850e-47 |
| Msa0621120 | Msa1240540 | 0.816619 | 5.036883e-52 | -8.615850e-47 |
| Msa0669850 | Msa1240540 | 0.800223 | 1.594106e-48 | -8.615850e-47 |
| Msa0168100 | Msa1240540 | 0.801628 | 8.230626e-49 | -8.615850e-47 |
| Msa0183620 | Msa1240540 | 0.802241 | 6.160757e-49 | -8.615850e-47 |
| Msa0207000 | Msa1240540 | 0.801766 | 7.711303e-49 | -8.615850e-47 |
| Msa1240540 | Msa1282010 | 0.963970 | 9.652502e-123 | -8.615850e-47 |
| Msa1240540 | Msa1284520 | 0.823353 | 1.449757e-53 | -8.615850e-47 |
| Msa1240540 | Msa1398480 | 0.810284 | 1.244321e-50 | -8.615850e-47 |
| Msa0376510 | Msa1240540 | 0.810611 | 1.057759e-50 | -8.615850e-47 |
| Msa0378080 | Msa1240540 | 0.817371 | 3.414849e-52 | -8.615850e-47 |
| Msa0425050 | Msa1240540 | 0.812954 | 3.268751e-51 | -8.615850e-47 |
| Msa0425940 | Msa1240540 | 0.814493 | 1.497968e-51 | -8.615850e-47 |
| Msa0426160 | Msa1240540 | 0.815277 | 1.003700e-51 | -8.615850e-47 |
| Msa0431430 | Msa1240540 | 0.802010 | 6.871547e-49 | -8.615850e-47 |
| Msa1018050 | Msa1240540 | 0.804821 | 1.796792e-49 | -8.615850e-47 |
| Msa1186380 | Msa1240540 | 0.877609 | 5.480210e-69 | -8.615850e-47 |
| Msa1188940 | Msa1240540 | 0.806854 | 6.720659e-50 | -8.615850e-47 |
| Msa0527600 | Msa1240540 | 0.803051 | 4.192885e-49 | -8.615850e-47 |
| Msa0546840 | Msa1240540 | 0.811676 | 6.214424e-51 | -8.615850e-47 |
| Msa0589150 | Msa1240540 | 0.810043 | 1.402167e-50 | -8.615850e-47 |
| Msa0845750 | Msa1240540 | 0.805868 | 1.084123e-49 | -8.615850e-47 |
| Msa0883030 | Msa1240540 | 0.803352 | 3.631133e-49 | -8.615850e-47 |
| Msa0890250 | Msa1240540 | 0.800033 | 1.742243e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240540 | MtrunA17_Chr8g0352721 | 97.015 | 469 | 14 | 0 | 1 | 469 | 1 | 469 | 0.0 | 934 |
| Msa1240540 | MtrunA17_Chr3g0083561 | 84.894 | 470 | 68 | 1 | 1 | 467 | 7 | 476 | 0.0 | 796 |
| Msa1240540 | MtrunA17_Chr1g0156541 | 84.468 | 470 | 70 | 1 | 1 | 467 | 7 | 476 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240540 | AT3G54470.1 | 75.212 | 472 | 114 | 2 | 1 | 469 | 4 | 475 | 0.0 | 741 |
Find 140 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTTCTCAGTGAGCTTTA+AGG | 0.126315 | 8_2:+23080889 | None:intergenic |
| CAGAGGGATCTTTCATATAT+TGG | 0.199334 | 8_2:-23079406 | Msa1240540:CDS |
| GATATCTCAGCTGTCAAATT+TGG | 0.202375 | 8_2:-23080833 | Msa1240540:CDS |
| GAAGAAGGCATTGTCATATT+TGG | 0.205194 | 8_2:-23080240 | Msa1240540:CDS |
| GATCATTCTGACTTTGTTAT+TGG | 0.242263 | 8_2:-23079122 | Msa1240540:CDS |
| TCAAGGATGGAGTGCATATT+TGG | 0.250929 | 8_2:-23077899 | Msa1240540:CDS |
| GCGATCGGTGGTGATGGTTT+GGG | 0.264314 | 8_2:-23079017 | Msa1240540:CDS |
| GGCGATCGGTGGTGATGGTT+TGG | 0.272966 | 8_2:-23079018 | Msa1240540:CDS |
| AATCACAACTCGAAATATTA+TGG | 0.274633 | 8_2:-23077656 | Msa1240540:three_prime_UTR |
| TATTTGGAAAAGTGCAATTA+AGG | 0.276049 | 8_2:-23077883 | Msa1240540:exon |
| TCAATCCAGCGTCGTGGTCT+AGG | 0.288057 | 8_2:-23079088 | Msa1240540:CDS |
| TACTAGTGGAACATCGGTTT+TGG | 0.292483 | 8_2:-23080510 | Msa1240540:CDS |
| GCAATAGGTAGGGCAGTATA+AGG | 0.296272 | 8_2:+23080665 | None:intergenic |
| AAATCAGAAGGTTGCTGCTT+TGG | 0.305232 | 8_2:-23080279 | Msa1240540:CDS |
| CCAAGCTCTTCCATTTGGTT+AGG | 0.314059 | 8_2:+23077851 | None:intergenic |
| TATCATATTGAATGCAAGTT+TGG | 0.316333 | 8_2:-23077755 | Msa1240540:three_prime_UTR |
| CTCGCCATCGTATACTTAAA+AGG | 0.323758 | 8_2:-23082462 | Msa1240540:five_prime_UTR |
| AAAGAGGTTGTTTGAGATAA+TGG | 0.328518 | 8_2:-23080186 | Msa1240540:CDS |
| CAGAAGGGTAAGATATAATA+AGG | 0.338277 | 8_2:+23080759 | None:intergenic |
| AACTTGCATTCAATATGATA+TGG | 0.342735 | 8_2:+23077758 | None:intergenic |
| ATCTCCCTTGGCAAGGTTAC+CGG | 0.343357 | 8_2:+23079175 | None:intergenic |
| GTTGCAATACTTACAGAATA+TGG | 0.343716 | 8_2:+23078978 | None:intergenic |
| ACAAGGTGGAAGAGAGAATC+TGG | 0.364094 | 8_2:-23080420 | Msa1240540:CDS |
| AGGCGTAGGTCTATGTAAAT+TGG | 0.365906 | 8_2:+23080779 | None:intergenic |
| TGTTTCATTCATGCAACTCC+TGG | 0.370072 | 8_2:-23079050 | Msa1240540:CDS |
| GGTTGTTATGAGATTCTTAG+AGG | 0.375138 | 8_2:-23080303 | Msa1240540:CDS |
| ACACAACTTCTTAATATTTG+AGG | 0.375899 | 8_2:-23079569 | Msa1240540:CDS |
| CGCAAGGAAATCAAAGACTA+TGG | 0.377270 | 8_2:-23080599 | Msa1240540:CDS |
| GGCTTGATGAGGAGATGGTT+AGG | 0.383602 | 8_2:-23080325 | Msa1240540:CDS |
| TGTGGATGGACTGAAATTAA+AGG | 0.386249 | 8_2:-23079337 | Msa1240540:intron |
| GATCTTTCATATATTGGATT+GGG | 0.387093 | 8_2:-23079400 | Msa1240540:CDS |
| CACACCCAAGCTCTTCCATT+TGG | 0.399405 | 8_2:+23077846 | None:intergenic |
| TAAGCATGGCCAAAGTTGTT+TGG | 0.403073 | 8_2:-23080549 | Msa1240540:CDS |
| CGAAGCTTAGAACCGAAATC+TGG | 0.403310 | 8_2:+23079839 | None:intergenic |
| CCGAAATCTGGAGTAAAATC+TGG | 0.404468 | 8_2:+23079851 | None:intergenic |
| CCAAAGTTGTTTGGTAATTG+AGG | 0.407599 | 8_2:-23080540 | Msa1240540:CDS |
| TTCAGTCCATCCACAATTCC+AGG | 0.408605 | 8_2:+23079345 | None:intergenic |
| CTCTGTTTGGCTGCGGATGT+TGG | 0.411459 | 8_2:-23080146 | Msa1240540:CDS |
| GGAAACTTCAAGCTTAAATC+CGG | 0.413842 | 8_2:-23080812 | Msa1240540:CDS |
| CAAGCTCTTCCATTTGGTTA+GGG | 0.423119 | 8_2:+23077852 | None:intergenic |
| TAGGGTTTGCCTCGTGGAAA+GGG | 0.428884 | 8_2:-23079227 | Msa1240540:CDS |
| GAAGGAAAGTAATCTCTGTT+TGG | 0.438745 | 8_2:-23080159 | Msa1240540:CDS |
| AATTCTTAAATTGACTGAAA+TGG | 0.439196 | 8_2:-23080372 | Msa1240540:CDS |
| GGATCTTTCATATATTGGAT+TGG | 0.442158 | 8_2:-23079401 | Msa1240540:CDS |
| GCTCGCGAATACCGTCTTCA+AGG | 0.453060 | 8_2:-23077916 | Msa1240540:CDS |
| GCTCACATTATCTCTGGTCC+TGG | 0.454214 | 8_2:-23079363 | Msa1240540:CDS |
| TCATAGTTTGAGAAATTTGT+CGG | 0.458857 | 8_2:+23080732 | None:intergenic |
| ACAGATACACAAGTGGCAAT+AGG | 0.466504 | 8_2:+23080650 | None:intergenic |
| ATTTGACAGCTGAGATATCA+TGG | 0.469219 | 8_2:+23080837 | None:intergenic |
| CCTCAATTACCAAACAACTT+TGG | 0.470170 | 8_2:+23080540 | None:intergenic |
| ATGCTTAAAATCCCCTTCAA+TGG | 0.472118 | 8_2:+23080565 | None:intergenic |
| ATAACTTCACACATAATGCT+TGG | 0.472319 | 8_2:+23077708 | None:intergenic |
| CAATCCAGCGTCGTGGTCTA+GGG | 0.472624 | 8_2:-23079087 | Msa1240540:CDS |
| GTAAATGCTCACATTATCTC+TGG | 0.472821 | 8_2:-23079369 | Msa1240540:CDS |
| TCAAACAACCTCTTTCCCAT+TGG | 0.473332 | 8_2:+23080194 | None:intergenic |
| TTAGGGTTTGCCTCGTGGAA+AGG | 0.474549 | 8_2:-23079228 | Msa1240540:intron |
| TGCAACTCCTGGAGTTCAAA+TGG | 0.475453 | 8_2:-23079039 | Msa1240540:CDS |
| TCCTTAAAGCTCACTGAGAA+AGG | 0.478439 | 8_2:-23080890 | Msa1240540:five_prime_UTR |
| TATCATCAAAGCAGCAAATC+CGG | 0.479086 | 8_2:-23077947 | Msa1240540:CDS |
| GCTTGTATTCCCTAACCAAA+TGG | 0.481263 | 8_2:-23077861 | Msa1240540:three_prime_UTR |
| TCAATATGATATGGATGTGC+AGG | 0.483498 | 8_2:+23077767 | None:intergenic |
| GCTTGATGAGGAGATGGTTA+GGG | 0.487710 | 8_2:-23080324 | Msa1240540:CDS |
| GGCACTTCTAAAGCCATTGA+AGG | 0.492625 | 8_2:-23080578 | Msa1240540:CDS |
| TAATGTCACTACCCCTATCA+TGG | 0.494196 | 8_2:+23077986 | None:intergenic |
| ACCTCGGCCATGCAGTATGA+AGG | 0.495056 | 8_2:-23079520 | Msa1240540:CDS |
| CTTTGTTATTGGCTTCATCT+CGG | 0.496047 | 8_2:-23079111 | Msa1240540:CDS |
| CCTAACCAAATGGAAGAGCT+TGG | 0.498415 | 8_2:-23077851 | Msa1240540:three_prime_UTR |
| GCTGCGCCGTTGCGTAACAT+AGG | 0.500507 | 8_2:-23080482 | Msa1240540:CDS |
| TATTCGCGAGCTGCTGCAGC+CGG | 0.500541 | 8_2:+23077928 | None:intergenic |
| GCGAATACCGTCTTCAAGGA+TGG | 0.504437 | 8_2:-23077912 | Msa1240540:CDS |
| CGATCGGTGGTGATGGTTTG+GGG | 0.505389 | 8_2:-23079016 | Msa1240540:CDS |
| GTTTGAGATAATGGCTGAGA+AGG | 0.509959 | 8_2:-23080177 | Msa1240540:CDS |
| CTAACCAAATGGAAGAGCTT+GGG | 0.514091 | 8_2:-23077850 | Msa1240540:three_prime_UTR |
| AGAGAGAATCTGGAGAGTAA+TGG | 0.516591 | 8_2:-23080410 | Msa1240540:CDS |
| ATTGAGGATTTAGTTACTAG+TGG | 0.516671 | 8_2:-23080524 | Msa1240540:CDS |
| CACTGAGAAAGGCACATCAA+TGG | 0.517073 | 8_2:-23080879 | Msa1240540:exon |
| CCGATCGCCATTTGAACTCC+AGG | 0.521870 | 8_2:+23079032 | None:intergenic |
| TGCAGCAGTGTAATCTCCCT+TGG | 0.523218 | 8_2:+23079163 | None:intergenic |
| TCTGGTCCTGGAATTGTGGA+TGG | 0.523500 | 8_2:-23079351 | Msa1240540:CDS |
| TATCTCTGGTCCTGGAATTG+TGG | 0.523722 | 8_2:-23079355 | Msa1240540:CDS |
| GTTGCGTAACATAGGGTTGA+AGG | 0.525932 | 8_2:-23080474 | Msa1240540:CDS |
| GTAAATTGGTGAGGAGATGC+CGG | 0.527390 | 8_2:+23080793 | None:intergenic |
| AGGAAGGCTTGATGAGGAGA+TGG | 0.530753 | 8_2:-23080330 | Msa1240540:CDS |
| CAAATGGCGATCGGTGGTGA+TGG | 0.537216 | 8_2:-23079023 | Msa1240540:CDS |
| TCCTTGCGGCGCATAACCAT+AGG | 0.538031 | 8_2:+23080614 | None:intergenic |
| GAAATTTGTCGGAGGACAGA+AGG | 0.538225 | 8_2:+23080743 | None:intergenic |
| GCACTTCTAAAGCCATTGAA+GGG | 0.540930 | 8_2:-23080577 | Msa1240540:CDS |
| GACAAGGTCGAATTTAGTGT+TGG | 0.550319 | 8_2:+23080697 | None:intergenic |
| CTTGCTGAAATGAGTTCAGC+CGG | 0.550747 | 8_2:-23079194 | Msa1240540:CDS |
| ATGCAGCAGCGGCAATAACA+AGG | 0.553585 | 8_2:-23082430 | Msa1240540:intron |
| AAATACAACTAAGTTGAAGA+AGG | 0.554785 | 8_2:-23080255 | Msa1240540:CDS |
| CCCTTCATACTGCATGGCCG+AGG | 0.557238 | 8_2:+23079519 | None:intergenic |
| CCTTGCGGCGCATAACCATA+GGG | 0.557370 | 8_2:+23080615 | None:intergenic |
| ATACACAAGTGGCAATAGGT+AGG | 0.560586 | 8_2:+23080654 | None:intergenic |
| GGCATTGTCATATTTGGAGA+GGG | 0.565982 | 8_2:-23080234 | Msa1240540:CDS |
| CCCTATGGTTATGCGCCGCA+AGG | 0.567893 | 8_2:-23080615 | Msa1240540:CDS |
| TGTCACTCACAACATCCCTA+TGG | 0.570619 | 8_2:-23080630 | Msa1240540:CDS |
| CAATAGGTAGGGCAGTATAA+GGG | 0.571437 | 8_2:+23080666 | None:intergenic |
| CATAGTCTTTGATTTCCTTG+CGG | 0.572557 | 8_2:+23080600 | None:intergenic |
| GATCGTAAGTTTGCCGACAT+CGG | 0.574286 | 8_2:-23079547 | Msa1240540:CDS |
| ATTCTTAGAGGAAAATCAGA+AGG | 0.582001 | 8_2:-23080291 | Msa1240540:CDS |
| TTCAGCCGGTAACCTTGCCA+AGG | 0.587283 | 8_2:-23079180 | Msa1240540:CDS |
| AATACTTAGGGTTTGCCTCG+TGG | 0.591469 | 8_2:-23079233 | Msa1240540:intron |
| TACACAAGTGGCAATAGGTA+GGG | 0.593517 | 8_2:+23080655 | None:intergenic |
| AAGTAATCTCTGTTTGGCTG+CGG | 0.594715 | 8_2:-23080153 | Msa1240540:CDS |
| AAATTTGTCGGAGGACAGAA+GGG | 0.597712 | 8_2:+23080744 | None:intergenic |
| GGCCGAGGTATTACCGATGT+CGG | 0.597823 | 8_2:+23079534 | None:intergenic |
| TTTAGTTACTAGTGGAACAT+CGG | 0.598433 | 8_2:-23080516 | Msa1240540:CDS |
| GACATTATCATAGTCGGACG+TGG | 0.598657 | 8_2:-23077970 | Msa1240540:CDS |
| TTTCAGGTTATCCATGATAG+GGG | 0.599223 | 8_2:-23077997 | Msa1240540:intron |
| TATAAGGGACACCGCAGACA+AGG | 0.604577 | 8_2:+23080681 | None:intergenic |
| TATGCAAAATTGCAGTAACA+TGG | 0.604654 | 8_2:-23077791 | Msa1240540:three_prime_UTR |
| CACTTCTAAAGCCATTGAAG+GGG | 0.608981 | 8_2:-23080576 | Msa1240540:CDS |
| GCATTACCCTTCATACTGCA+TGG | 0.609301 | 8_2:+23079513 | None:intergenic |
| GGTAAGATATAATAAGGCGT+AGG | 0.610056 | 8_2:+23080765 | None:intergenic |
| CCTGGAGTTCAAATGGCGAT+CGG | 0.613183 | 8_2:-23079032 | Msa1240540:CDS |
| GGTAGTGACATTATCATAGT+CGG | 0.618352 | 8_2:-23077976 | Msa1240540:CDS |
| ATGCTTGCTGAAAACTCATG+TGG | 0.618767 | 8_2:-23079882 | Msa1240540:CDS |
| AGGCATTGTCATATTTGGAG+AGG | 0.619569 | 8_2:-23080235 | Msa1240540:CDS |
| CAGTGTAATCTCCCTTGGCA+AGG | 0.626881 | 8_2:+23079168 | None:intergenic |
| CCTCGGCCATGCAGTATGAA+GGG | 0.628115 | 8_2:-23079519 | Msa1240540:intron |
| GGTGCAAACTTATGCAGCAG+CGG | 0.633352 | 8_2:-23082441 | Msa1240540:five_prime_UTR |
| ATGCACTCCATCCTTGAAGA+CGG | 0.634810 | 8_2:+23077905 | None:intergenic |
| ATTGCTTGAAATTGCCGACA+AGG | 0.638723 | 8_2:-23080111 | Msa1240540:intron |
| AGTGCCCTAGACCACGACGC+TGG | 0.638835 | 8_2:+23079083 | None:intergenic |
| GAATTTAGTGTTGGAGACAG+AGG | 0.640768 | 8_2:+23080706 | None:intergenic |
| TTCAACCCTATGTTACGCAA+CGG | 0.641906 | 8_2:+23080476 | None:intergenic |
| GGAGTTCAAATGGCGATCGG+TGG | 0.647339 | 8_2:-23079029 | Msa1240540:CDS |
| TGCCGACATCGGTAATACCT+CGG | 0.647655 | 8_2:-23079536 | Msa1240540:CDS |
| TAGGTCTATGTAAATTGGTG+AGG | 0.648398 | 8_2:+23080784 | None:intergenic |
| ACTAAATTCGACCTTGTCTG+CGG | 0.652430 | 8_2:-23080692 | Msa1240540:CDS |
| TAGTTTGAGAAATTTGTCGG+AGG | 0.654215 | 8_2:+23080735 | None:intergenic |
| GGAGTTGCATGAATGAAACA+AGG | 0.667159 | 8_2:+23079053 | None:intergenic |
| TCAGCCGGTAACCTTGCCAA+GGG | 0.668243 | 8_2:-23079179 | Msa1240540:CDS |
| TGCAGCAGTGAAAATTGCTG+AGG | 0.668834 | 8_2:-23079144 | Msa1240540:CDS |
| TCTCGGTCAATCCAGCGTCG+TGG | 0.669937 | 8_2:-23079094 | Msa1240540:CDS |
| TTTCGGTTCTAAGCTTCGCG+CGG | 0.682835 | 8_2:-23079834 | Msa1240540:intron |
| TTGATTGATAGAGAACAAGG+TGG | 0.705011 | 8_2:-23080434 | Msa1240540:CDS |
| GTGAGTGACAGATACACAAG+TGG | 0.716854 | 8_2:+23080643 | None:intergenic |
| AGCAACAAACCCTTTCCACG+AGG | 0.731068 | 8_2:+23079218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATAAAAAATATTAT+GGG | - | chr8_2:23081504-23081523 | Msa1240540:intron | 0.0% |
| !! | AAAACAATTTAACTATATTA+CGG | - | chr8_2:23078309-23078328 | Msa1240540:intron | 10.0% |
| !!! | TTTTTTATTTAGAAAATGAA+TGG | + | chr8_2:23081255-23081274 | None:intergenic | 10.0% |
| !! | AATTAGTTAAAAGTTAGTTA+CGG | - | chr8_2:23078140-23078159 | Msa1240540:intron | 15.0% |
| !! | AAACAATTTAACTATATTAC+GGG | - | chr8_2:23078310-23078329 | Msa1240540:intron | 15.0% |
| !!! | TGTTAGTATTAGTAATTTTA+TGG | + | chr8_2:23078509-23078528 | None:intergenic | 15.0% |
| !! | TAAAATGATGAATAATACTT+AGG | - | chr8_2:23080858-23080877 | Msa1240540:CDS | 15.0% |
| !! | AAAATGATGAATAATACTTA+GGG | - | chr8_2:23080859-23080878 | Msa1240540:CDS | 15.0% |
| !! | AAATTATTGAAAATGTATTG+CGG | - | chr8_2:23081572-23081591 | Msa1240540:intron | 15.0% |
| !!! | GAGATTTTTATTAATTAAAG+TGG | - | chr8_2:23081633-23081652 | Msa1240540:intron | 15.0% |
| !! | TTTCAATACTGAATATTAAA+GGG | + | chr8_2:23081933-23081952 | None:intergenic | 15.0% |
| !!! | TTTTCAATACTGAATATTAA+AGG | + | chr8_2:23081934-23081953 | None:intergenic | 15.0% |
| !! | ATTTATATTGTAGCTTATAG+CGG | - | chr8_2:23077797-23077816 | Msa1240540:three_prime_UTR | 20.0% |
| !! | ATTAGTTAAAAGTTAGTTAC+GGG | - | chr8_2:23078141-23078160 | Msa1240540:intron | 20.0% |
| !!! | TTGTTCTTAGAATTTTGATT+GGG | + | chr8_2:23078798-23078817 | None:intergenic | 20.0% |
| !!! | AGGAATTTTATGATTAAATC+TGG | - | chr8_2:23078948-23078967 | Msa1240540:intron | 20.0% |
| !! | AATTCTTAAATTGACTGAAA+TGG | - | chr8_2:23079732-23079751 | Msa1240540:intron | 20.0% |
| !!! | GTGAAAATTTTGAAAGAAAA+AGG | - | chr8_2:23079754-23079773 | Msa1240540:intron | 20.0% |
| !!! | AAATTTTGAAAGAAAAAGGA+AGG | - | chr8_2:23079758-23079777 | Msa1240540:intron | 20.0% |
| !!! | AGTGTTCTTAATTTGAAATA+TGG | - | chr8_2:23080080-23080099 | Msa1240540:intron | 20.0% |
| !!! | TCTTAATTTGAAATATGGAT+TGG | - | chr8_2:23080085-23080104 | Msa1240540:intron | 20.0% |
| !!! | TTTGTATTTTCTTGTTTATC+AGG | - | chr8_2:23080186-23080205 | Msa1240540:CDS | 20.0% |
| !! | TTATGATCATAATTCTTCTA+TGG | + | chr8_2:23080794-23080813 | None:intergenic | 20.0% |
| !! | AAAAATGAACCATCAATAAA+AGG | - | chr8_2:23081271-23081290 | Msa1240540:intron | 20.0% |
| !! | AAAATGAACCATCAATAAAA+GGG | - | chr8_2:23081272-23081291 | Msa1240540:intron | 20.0% |
| !!! | GATGTTAGATATAAAGATTT+TGG | + | chr8_2:23081364-23081383 | None:intergenic | 20.0% |
| !!! | TAATATTTTACTCATTTGTC+CGG | + | chr8_2:23081456-23081475 | None:intergenic | 20.0% |
| !! | CAACTGAAATGATAATATTT+AGG | + | chr8_2:23081537-23081556 | None:intergenic | 20.0% |
| !! | TTCAATACTGAATATTAAAG+GGG | + | chr8_2:23081932-23081951 | None:intergenic | 20.0% |
| !! | CAAAAAGGAATATAAATAAG+AGG | + | chr8_2:23081979-23081998 | None:intergenic | 20.0% |
| ! | TATGAAATGACGTAAAAAAG+AGG | - | chr8_2:23077884-23077903 | Msa1240540:exon | 25.0% |
| ! | ATGACTAAAAAAGACATGTT+TGG | + | chr8_2:23078060-23078079 | None:intergenic | 25.0% |
| !! | GATTTAACAAAGAGTTTGTT+TGG | + | chr8_2:23078120-23078139 | None:intergenic | 25.0% |
| ! | TTAGTTAAAAGTTAGTTACG+GGG | - | chr8_2:23078142-23078161 | Msa1240540:intron | 25.0% |
| ! | CTAGTAGATAAACTCAAATA+AGG | + | chr8_2:23078183-23078202 | None:intergenic | 25.0% |
| ! | TCCATGATAGTTTATGAAAA+TGG | - | chr8_2:23078271-23078290 | Msa1240540:intron | 25.0% |
| !! | ACCATTTTCATAAACTATCA+TGG | + | chr8_2:23078275-23078294 | None:intergenic | 25.0% |
| !!! | TTTACAGTTTTGATACATTC+AGG | + | chr8_2:23078385-23078404 | None:intergenic | 25.0% |
| !!! | GTCTGTTTTATTAGTCATTT+TGG | - | chr8_2:23078418-23078437 | Msa1240540:intron | 25.0% |
| ! | TTGCAATTTCGATACATTTA+AGG | - | chr8_2:23078550-23078569 | Msa1240540:intron | 25.0% |
| !!! | GTTGTTCTTAGAATTTTGAT+TGG | + | chr8_2:23078799-23078818 | None:intergenic | 25.0% |
| ! | TTCAATTATGCCTATAAACT+AGG | + | chr8_2:23078833-23078852 | None:intergenic | 25.0% |
| ! | TCATAGTTTGAGAAATTTGT+CGG | + | chr8_2:23079375-23079394 | None:intergenic | 25.0% |
| !! | AAATACAACTAAGTTGAAGA+AGG | - | chr8_2:23079849-23079868 | Msa1240540:CDS | 25.0% |
| ! | TAAAAAATTTCTCACCTTGT+CGG | + | chr8_2:23080010-23080029 | None:intergenic | 25.0% |
| !!! | GAAATTTTTTATTACAGCGA+TGG | - | chr8_2:23080019-23080038 | Msa1240540:intron | 25.0% |
| !!! | TATTTTCTTGTTTATCAGGT+TGG | - | chr8_2:23080190-23080209 | Msa1240540:CDS | 25.0% |
| !!! | ATTTTCTTGTTTATCAGGTT+GGG | - | chr8_2:23080191-23080210 | Msa1240540:CDS | 25.0% |
| !! | CAACATTTAACCAATTTTTG+AGG | - | chr8_2:23080446-23080465 | Msa1240540:CDS | 25.0% |
| ! | GTATGAAATTCCTCAAAAAT+TGG | + | chr8_2:23080459-23080478 | None:intergenic | 25.0% |
| ! | ACACAACTTCTTAATATTTG+AGG | - | chr8_2:23080535-23080554 | Msa1240540:CDS | 25.0% |
| ! | GATCTTTCATATATTGGATT+GGG | - | chr8_2:23080704-23080723 | Msa1240540:CDS | 25.0% |
| ! | AAATGAACCATCAATAAAAG+GGG | - | chr8_2:23081273-23081292 | Msa1240540:intron | 25.0% |
| !!! | AGCACTTTACTTTTAACATT+TGG | - | chr8_2:23081400-23081419 | Msa1240540:intron | 25.0% |
| !!! | GCACTTTACTTTTAACATTT+GGG | - | chr8_2:23081401-23081420 | Msa1240540:intron | 25.0% |
| !! | AATATTTTACTCATTTGTCC+GGG | + | chr8_2:23081455-23081474 | None:intergenic | 25.0% |
| ! | TATGCAAGTTAAGTAAAGAA+GGG | + | chr8_2:23081799-23081818 | None:intergenic | 25.0% |
| ! | ATATGCAAGTTAAGTAAAGA+AGG | + | chr8_2:23081800-23081819 | None:intergenic | 25.0% |
| ! | AAATAAGAATGCAATGAGTT+TGG | + | chr8_2:23081845-23081864 | None:intergenic | 25.0% |
| !!! | TTCTTTGAAGTTGATTTATG+TGG | - | chr8_2:23081863-23081882 | Msa1240540:intron | 25.0% |
| ! | AACCTGAAAAAGAAAAACAT+TGG | + | chr8_2:23082096-23082115 | None:intergenic | 25.0% |
| !! | TATTTGGAAAAGTGCAATTA+AGG | - | chr8_2:23082221-23082240 | Msa1240540:intron | 25.0% |
| ! | AACTTGCATTCAATATGATA+TGG | + | chr8_2:23082349-23082368 | None:intergenic | 25.0% |
| ! | TATCATATTGAATGCAAGTT+TGG | - | chr8_2:23082349-23082368 | Msa1240540:intron | 25.0% |
| ! | AATCACAACTCGAAATATTA+TGG | - | chr8_2:23082448-23082467 | Msa1240540:five_prime_UTR | 25.0% |
| TTCATAAACTATCATGGAGA+AGG | + | chr8_2:23078269-23078288 | None:intergenic | 30.0% | |
| ACTAATAAAACAGACACTTG+AGG | + | chr8_2:23078413-23078432 | None:intergenic | 30.0% | |
| ACAACCTAAAAACATATCTG+AGG | + | chr8_2:23078445-23078464 | None:intergenic | 30.0% | |
| AATTGCAAACATGTCTATCA+TGG | + | chr8_2:23078538-23078557 | None:intergenic | 30.0% | |
| TTCGATACATTTAAGGACTA+TGG | - | chr8_2:23078557-23078576 | Msa1240540:intron | 30.0% | |
| TCTCTAACAACCTAGTTTAT+AGG | - | chr8_2:23078820-23078839 | Msa1240540:intron | 30.0% | |
| ATAGGCATAATTGAATCAAG+TGG | - | chr8_2:23078838-23078857 | Msa1240540:intron | 30.0% | |
| CAGAAGGGTAAGATATAATA+AGG | + | chr8_2:23079348-23079367 | None:intergenic | 30.0% | |
| ATTGAGGATTTAGTTACTAG+TGG | - | chr8_2:23079580-23079599 | Msa1240540:CDS | 30.0% | |
| TTTAGTTACTAGTGGAACAT+CGG | - | chr8_2:23079588-23079607 | Msa1240540:intron | 30.0% | |
| !!! | GTTTTGATTGATAGAGAACA+AGG | - | chr8_2:23079667-23079686 | Msa1240540:intron | 30.0% |
| ATTCTTAGAGGAAAATCAGA+AGG | - | chr8_2:23079813-23079832 | Msa1240540:intron | 30.0% | |
| TAAGTTGTCCAAAAATCCAA+TGG | - | chr8_2:23079894-23079913 | Msa1240540:CDS | 30.0% | |
| AAGTTGTCCAAAAATCCAAT+GGG | - | chr8_2:23079895-23079914 | Msa1240540:CDS | 30.0% | |
| ! | AAAGAGGTTGTTTGAGATAA+TGG | - | chr8_2:23079918-23079937 | Msa1240540:intron | 30.0% |
| GTTCTCTTAAATATCATCGA+AGG | - | chr8_2:23080124-23080143 | Msa1240540:CDS | 30.0% | |
| TGAGGAATTTCATACATTTC+TGG | - | chr8_2:23080464-23080483 | Msa1240540:CDS | 30.0% | |
| GGATCTTTCATATATTGGAT+TGG | - | chr8_2:23080703-23080722 | Msa1240540:CDS | 30.0% | |
| ! | GATCATTCTGACTTTGTTAT+TGG | - | chr8_2:23080982-23081001 | Msa1240540:intron | 30.0% |
| GTTGCAATACTTACAGAATA+TGG | + | chr8_2:23081129-23081148 | None:intergenic | 30.0% | |
| CATATGTGAAGGATCATATA+TGG | - | chr8_2:23081195-23081214 | Msa1240540:intron | 30.0% | |
| TTATCAATTGAGTACACTCT+TGG | - | chr8_2:23081311-23081330 | Msa1240540:intron | 30.0% | |
| !! | TATAAAGATTTTGGAGAGCT+CGG | + | chr8_2:23081355-23081374 | None:intergenic | 30.0% |
| ! | AAATCTCATCGATTGTAACA+TGG | + | chr8_2:23081662-23081681 | None:intergenic | 30.0% |
| ATGCAAGTTAAGTAAAGAAG+GGG | + | chr8_2:23081798-23081817 | None:intergenic | 30.0% | |
| ATACTGAATATTAAAGGGGT+GGG | + | chr8_2:23081928-23081947 | None:intergenic | 30.0% | |
| AATACTGAATATTAAAGGGG+TGG | + | chr8_2:23081929-23081948 | None:intergenic | 30.0% | |
| AGGAAAGAAATACTGCATTA+AGG | + | chr8_2:23081959-23081978 | None:intergenic | 30.0% | |
| ! | CACCAATGTTTTTCTTTTTC+AGG | - | chr8_2:23082091-23082110 | Msa1240540:intron | 30.0% |
| !!! | TTTTTCAGGTTATCCATGAT+AGG | - | chr8_2:23082105-23082124 | Msa1240540:intron | 30.0% |
| !!! | TTTTCAGGTTATCCATGATA+GGG | - | chr8_2:23082106-23082125 | Msa1240540:intron | 30.0% |
| TATGCAAAATTGCAGTAACA+TGG | - | chr8_2:23082313-23082332 | Msa1240540:intron | 30.0% | |
| ATAACTTCACACATAATGCT+TGG | + | chr8_2:23082399-23082418 | None:intergenic | 30.0% | |
| !! | TGCACCTTTTAAGTATACGA+TGG | + | chr8_2:23077649-23077668 | None:intergenic | 35.0% |
| ATGATTGAATTTGCACTGTC+TGG | - | chr8_2:23077829-23077848 | Msa1240540:three_prime_UTR | 35.0% | |
| ! | TTTTCAATTAAGATTGCCGC+CGG | - | chr8_2:23077930-23077949 | Msa1240540:CDS | 35.0% |
| !! | ATCATCTCAGTTTTATACCC+CGG | + | chr8_2:23077952-23077971 | None:intergenic | 35.0% |
| ! | TGGTCCTCAGATATGTTTTT+AGG | - | chr8_2:23078438-23078457 | Msa1240540:intron | 35.0% |
| !!! | TCCTCGAATGTGTTTTTTGT+TGG | - | chr8_2:23078473-23078492 | Msa1240540:intron | 35.0% |
| ACCAACAAAAAACACATTCG+AGG | + | chr8_2:23078477-23078496 | None:intergenic | 35.0% | |
| CATACATTCAGCTACTCAAA+TGG | - | chr8_2:23078597-23078616 | Msa1240540:intron | 35.0% | |
| TGCTTTCATGTCAAAGCTAT+CGG | - | chr8_2:23078640-23078659 | Msa1240540:intron | 35.0% | |
| TATCTCATCTCATCCAATGT+GGG | + | chr8_2:23078726-23078745 | None:intergenic | 35.0% | |
| ATATCTCATCTCATCCAATG+TGG | + | chr8_2:23078727-23078746 | None:intergenic | 35.0% | |
| TCCACTTATAAACAGGTTGT+CGG | + | chr8_2:23078753-23078772 | None:intergenic | 35.0% | |
| !! | GAAGCAGAGTACTTTTAGTA+AGG | - | chr8_2:23078895-23078914 | Msa1240540:intron | 35.0% |
| CTGATTCCTCACATCATAAA+GGG | + | chr8_2:23078930-23078949 | None:intergenic | 35.0% | |
| ! | AACAATCAGTGTCATTCAGT+GGG | + | chr8_2:23079177-23079196 | None:intergenic | 35.0% |
| ! | AATGACACTGATTGTTCTGA+AGG | - | chr8_2:23079181-23079200 | Msa1240540:CDS | 35.0% |
| ATTTGACAGCTGAGATATCA+TGG | + | chr8_2:23079270-23079289 | None:intergenic | 35.0% | |
| GATATCTCAGCTGTCAAATT+TGG | - | chr8_2:23079271-23079290 | Msa1240540:intron | 35.0% | |
| GGAAACTTCAAGCTTAAATC+CGG | - | chr8_2:23079292-23079311 | Msa1240540:intron | 35.0% | |
| TAGGTCTATGTAAATTGGTG+AGG | + | chr8_2:23079323-23079342 | None:intergenic | 35.0% | |
| GGTAAGATATAATAAGGCGT+AGG | + | chr8_2:23079342-23079361 | None:intergenic | 35.0% | |
| TAGTTTGAGAAATTTGTCGG+AGG | + | chr8_2:23079372-23079391 | None:intergenic | 35.0% | |
| ! | CATAGTCTTTGATTTCCTTG+CGG | + | chr8_2:23079507-23079526 | None:intergenic | 35.0% |
| ATGCTTAAAATCCCCTTCAA+TGG | + | chr8_2:23079542-23079561 | None:intergenic | 35.0% | |
| ! | ATTGAAGGGGATTTTAAGCA+TGG | - | chr8_2:23079541-23079560 | Msa1240540:CDS | 35.0% |
| CCTCAATTACCAAACAACTT+TGG | + | chr8_2:23079567-23079586 | None:intergenic | 35.0% | |
| ! | CCAAAGTTGTTTGGTAATTG+AGG | - | chr8_2:23079564-23079583 | Msa1240540:CDS | 35.0% |
| TTGATTGATAGAGAACAAGG+TGG | - | chr8_2:23079670-23079689 | Msa1240540:intron | 35.0% | |
| GGTTGTTATGAGATTCTTAG+AGG | - | chr8_2:23079801-23079820 | Msa1240540:intron | 35.0% | |
| !! | GAAGAAGGCATTGTCATATT+TGG | - | chr8_2:23079864-23079883 | Msa1240540:CDS | 35.0% |
| GAAGGAAAGTAATCTCTGTT+TGG | - | chr8_2:23079945-23079964 | Msa1240540:intron | 35.0% | |
| TATCATCGAAGGTTGAAGTT+TGG | - | chr8_2:23080135-23080154 | Msa1240540:CDS | 35.0% | |
| ! | CCAGATTTTACTCCAGATTT+CGG | - | chr8_2:23080253-23080272 | Msa1240540:CDS | 35.0% |
| GTATCAGTATGCAATACTCA+GGG | + | chr8_2:23080322-23080341 | None:intergenic | 35.0% | |
| AGTATCAGTATGCAATACTC+AGG | + | chr8_2:23080323-23080342 | None:intergenic | 35.0% | |
| ! | ACACGTTACACTCTTTTTGT+AGG | + | chr8_2:23080417-23080436 | None:intergenic | 35.0% |
| TGAATGCAGAAACAGATGAA+AGG | + | chr8_2:23080650-23080669 | None:intergenic | 35.0% | |
| TCTGCAGACAACATAAAAGA+AGG | + | chr8_2:23080682-23080701 | None:intergenic | 35.0% | |
| ! | TTCTTTTATGTTGTCTGCAG+AGG | - | chr8_2:23080681-23080700 | Msa1240540:CDS | 35.0% |
| ! | TCTTTTATGTTGTCTGCAGA+GGG | - | chr8_2:23080682-23080701 | Msa1240540:CDS | 35.0% |
| CAGAGGGATCTTTCATATAT+TGG | - | chr8_2:23080698-23080717 | Msa1240540:CDS | 35.0% | |
| GTAAATGCTCACATTATCTC+TGG | - | chr8_2:23080735-23080754 | Msa1240540:CDS | 35.0% | |
| !! | TGTGGATGGACTGAAATTAA+AGG | - | chr8_2:23080767-23080786 | Msa1240540:CDS | 35.0% |
| !! | CTTTGTTATTGGCTTCATCT+CGG | - | chr8_2:23080993-23081012 | Msa1240540:intron | 35.0% |
| TGGTAATTAGCAATGCTTAC+AGG | + | chr8_2:23081153-23081172 | None:intergenic | 35.0% | |
| ! | CACATATGAGCATAGACTTT+TGG | + | chr8_2:23081183-23081202 | None:intergenic | 35.0% |
| AAGTCTATGCTCATATGTGA+AGG | - | chr8_2:23081184-23081203 | Msa1240540:intron | 35.0% | |
| ! | TACTGATCCCCTTTTATTGA+TGG | + | chr8_2:23081283-23081302 | None:intergenic | 35.0% |
| ! | GTAAAGTGCTTCATAGATGT+TGG | + | chr8_2:23081390-23081409 | None:intergenic | 35.0% |
| GATTTGAACCATTTACCTTG+AGG | - | chr8_2:23081677-23081696 | Msa1240540:intron | 35.0% | |
| TCCAAATCCTAGTAGGATAA+GGG | + | chr8_2:23081769-23081788 | None:intergenic | 35.0% | |
| ATCCAAATCCTAGTAGGATA+AGG | + | chr8_2:23081770-23081789 | None:intergenic | 35.0% | |
| GGAAAAATCCAAATCCTAGT+AGG | + | chr8_2:23081776-23081795 | None:intergenic | 35.0% | |
| TGCAAGTTAAGTAAAGAAGG+GGG | + | chr8_2:23081797-23081816 | None:intergenic | 35.0% | |
| !! | TTTCAGGTTATCCATGATAG+GGG | - | chr8_2:23082107-23082126 | Msa1240540:intron | 35.0% |
| GGTAGTGACATTATCATAGT+CGG | - | chr8_2:23082128-23082147 | Msa1240540:intron | 35.0% | |
| TATCATCAAAGCAGCAAATC+CGG | - | chr8_2:23082157-23082176 | Msa1240540:intron | 35.0% | |
| TCAATATGATATGGATGTGC+AGG | + | chr8_2:23082340-23082359 | None:intergenic | 35.0% | |
| ! | GTGATTGCAATTTTGTCACT+AGG | + | chr8_2:23082434-23082453 | None:intergenic | 35.0% |
| CTCGCCATCGTATACTTAAA+AGG | - | chr8_2:23077642-23077661 | Msa1240540:three_prime_UTR | 40.0% | |
| TTTCAATTAAGATTGCCGCC+GGG | - | chr8_2:23077931-23077950 | Msa1240540:CDS | 40.0% | |
| ! | TTACGGGTAAACCACCATTT+TGG | - | chr8_2:23078326-23078345 | Msa1240540:intron | 40.0% |
| ! | TACACTTTGAGGGACCAAAA+TGG | + | chr8_2:23078343-23078362 | None:intergenic | 40.0% |
| GCTTTCATGTCAAAGCTATC+GGG | - | chr8_2:23078641-23078660 | Msa1240540:intron | 40.0% | |
| TATCCAGTCCTATGTGTTAG+AGG | - | chr8_2:23078685-23078704 | Msa1240540:intron | 40.0% | |
| ATCCAGTCCTATGTGTTAGA+GGG | - | chr8_2:23078686-23078705 | Msa1240540:intron | 40.0% | |
| CCACTTATAAACAGGTTGTC+GGG | + | chr8_2:23078752-23078771 | None:intergenic | 40.0% | |
| GACAACCTGTTTATAAGTGG+AGG | - | chr8_2:23078752-23078771 | Msa1240540:intron | 40.0% | |
| GATTGGGCTCTTTATAAGTG+AGG | + | chr8_2:23078782-23078801 | None:intergenic | 40.0% | |
| TGTCATCCCTTTATGATGTG+AGG | - | chr8_2:23078921-23078940 | Msa1240540:intron | 40.0% | |
| CCTGATTCCTCACATCATAA+AGG | + | chr8_2:23078931-23078950 | None:intergenic | 40.0% | |
| CCTTTATGATGTGAGGAATC+AGG | - | chr8_2:23078928-23078947 | Msa1240540:intron | 40.0% | |
| ATCGTATCGCAGAACAATAG+CGG | - | chr8_2:23079075-23079094 | Msa1240540:CDS | 40.0% | |
| ! | GAACAATCAGTGTCATTCAG+TGG | + | chr8_2:23079178-23079197 | None:intergenic | 40.0% |
| TCCTTAAAGCTCACTGAGAA+AGG | - | chr8_2:23079214-23079233 | Msa1240540:CDS | 40.0% | |
| AGGCGTAGGTCTATGTAAAT+TGG | + | chr8_2:23079328-23079347 | None:intergenic | 40.0% | |
| AAATTTGTCGGAGGACAGAA+GGG | + | chr8_2:23079363-23079382 | None:intergenic | 40.0% | |
| ! | GAATTTAGTGTTGGAGACAG+AGG | + | chr8_2:23079401-23079420 | None:intergenic | 40.0% |
| GACAAGGTCGAATTTAGTGT+TGG | + | chr8_2:23079410-23079429 | None:intergenic | 40.0% | |
| ACTAAATTCGACCTTGTCTG+CGG | - | chr8_2:23079412-23079431 | Msa1240540:intron | 40.0% | |
| CAATAGGTAGGGCAGTATAA+GGG | + | chr8_2:23079441-23079460 | None:intergenic | 40.0% | |
| TACACAAGTGGCAATAGGTA+GGG | + | chr8_2:23079452-23079471 | None:intergenic | 40.0% | |
| ATACACAAGTGGCAATAGGT+AGG | + | chr8_2:23079453-23079472 | None:intergenic | 40.0% | |
| ACAGATACACAAGTGGCAAT+AGG | + | chr8_2:23079457-23079476 | None:intergenic | 40.0% | |
| CGCAAGGAAATCAAAGACTA+TGG | - | chr8_2:23079505-23079524 | Msa1240540:intron | 40.0% | |
| !! | GCACTTCTAAAGCCATTGAA+GGG | - | chr8_2:23079527-23079546 | Msa1240540:CDS | 40.0% |
| !! | CACTTCTAAAGCCATTGAAG+GGG | - | chr8_2:23079528-23079547 | Msa1240540:CDS | 40.0% |
| TAAGCATGGCCAAAGTTGTT+TGG | - | chr8_2:23079555-23079574 | Msa1240540:CDS | 40.0% | |
| !!! | TACTAGTGGAACATCGGTTT+TGG | - | chr8_2:23079594-23079613 | Msa1240540:intron | 40.0% |
| TTCAACCCTATGTTACGCAA+CGG | + | chr8_2:23079631-23079650 | None:intergenic | 40.0% | |
| AGAGAGAATCTGGAGAGTAA+TGG | - | chr8_2:23079694-23079713 | Msa1240540:intron | 40.0% | |
| AGAAAAAGGAAGGCTTGATG+AGG | - | chr8_2:23079768-23079787 | Msa1240540:intron | 40.0% | |
| ! | AAATCAGAAGGTTGCTGCTT+TGG | - | chr8_2:23079825-23079844 | Msa1240540:intron | 40.0% |
| ! | AGGCATTGTCATATTTGGAG+AGG | - | chr8_2:23079869-23079888 | Msa1240540:CDS | 40.0% |
| GGCATTGTCATATTTGGAGA+GGG | - | chr8_2:23079870-23079889 | Msa1240540:CDS | 40.0% | |
| ! | CCTCTTTCCCATTGGATTTT+TGG | + | chr8_2:23079905-23079924 | None:intergenic | 40.0% |
| CCAAAAATCCAATGGGAAAG+AGG | - | chr8_2:23079902-23079921 | Msa1240540:intron | 40.0% | |
| TCAAACAACCTCTTTCCCAT+TGG | + | chr8_2:23079913-23079932 | None:intergenic | 40.0% | |
| ! | GTTTGAGATAATGGCTGAGA+AGG | - | chr8_2:23079927-23079946 | Msa1240540:intron | 40.0% |
| AAGTAATCTCTGTTTGGCTG+CGG | - | chr8_2:23079951-23079970 | Msa1240540:intron | 40.0% | |
| ATTGCTTGAAATTGCCGACA+AGG | - | chr8_2:23079993-23080012 | Msa1240540:intron | 40.0% | |
| ! | ATGCTTGCTGAAAACTCATG+TGG | - | chr8_2:23080222-23080241 | Msa1240540:CDS | 40.0% |
| ! | CCGAAATCTGGAGTAAAATC+TGG | + | chr8_2:23080256-23080275 | None:intergenic | 40.0% |
| TATGAAGGGTAATGCATTGC+TGG | - | chr8_2:23080599-23080618 | Msa1240540:CDS | 40.0% | |
| GGAGTTGCATGAATGAAACA+AGG | + | chr8_2:23081054-23081073 | None:intergenic | 40.0% | |
| TGTTTCATTCATGCAACTCC+TGG | - | chr8_2:23081054-23081073 | Msa1240540:intron | 40.0% | |
| !! | CATAGACTTTTGGAGACAGT+TGG | + | chr8_2:23081173-23081192 | None:intergenic | 40.0% |
| CATTTGGGTCTACTCTATGA+AGG | - | chr8_2:23081416-23081435 | Msa1240540:intron | 40.0% | |
| ! | TATTGCGGCTTTGATTCACT+TGG | - | chr8_2:23081587-23081606 | Msa1240540:intron | 40.0% |
| ! | TCACTTGGCAAGCCAATTTT+TGG | - | chr8_2:23081602-23081621 | Msa1240540:intron | 40.0% |
| ! | CACTTGGCAAGCCAATTTTT+GGG | - | chr8_2:23081603-23081622 | Msa1240540:intron | 40.0% |
| ! | ACTTGGCAAGCCAATTTTTG+GGG | - | chr8_2:23081604-23081623 | Msa1240540:intron | 40.0% |
| CCATGTAACCTCAAGGTAAA+TGG | + | chr8_2:23081688-23081707 | None:intergenic | 40.0% | |
| CCATTTACCTTGAGGTTACA+TGG | - | chr8_2:23081685-23081704 | Msa1240540:intron | 40.0% | |
| TAACCAACCCTTATCCTACT+AGG | - | chr8_2:23081759-23081778 | Msa1240540:intron | 40.0% | |
| AATCCTAGTAGGATAAGGGT+TGG | + | chr8_2:23081765-23081784 | None:intergenic | 40.0% | |
| ACCCTTATCCTACTAGGATT+TGG | - | chr8_2:23081765-23081784 | Msa1240540:intron | 40.0% | |
| TTATGTGGCATGCAGTAACT+AGG | - | chr8_2:23081878-23081897 | Msa1240540:intron | 40.0% | |
| GAGTGTGTGAAGCAACAAAA+AGG | + | chr8_2:23081994-23082013 | None:intergenic | 40.0% | |
| ACAACCTTATCCCACTAACT+TGG | - | chr8_2:23082047-23082066 | Msa1240540:intron | 40.0% | |
| CAACCTTATCCCACTAACTT+GGG | - | chr8_2:23082048-23082067 | Msa1240540:intron | 40.0% | |
| TAATGTCACTACCCCTATCA+TGG | + | chr8_2:23082121-23082140 | None:intergenic | 40.0% | |
| TCAAGGATGGAGTGCATATT+TGG | - | chr8_2:23082205-23082224 | Msa1240540:intron | 40.0% | |
| GCTTGTATTCCCTAACCAAA+TGG | - | chr8_2:23082243-23082262 | Msa1240540:intron | 40.0% | |
| CAAGCTCTTCCATTTGGTTA+GGG | + | chr8_2:23082255-23082274 | None:intergenic | 40.0% | |
| CTAACCAAATGGAAGAGCTT+GGG | - | chr8_2:23082254-23082273 | Msa1240540:intron | 40.0% | |
| TTCAATTAAGATTGCCGCCG+GGG | - | chr8_2:23077932-23077951 | Msa1240540:CDS | 45.0% | |
| !! | ATCTCAGTTTTATACCCCGG+CGG | + | chr8_2:23077949-23077968 | None:intergenic | 45.0% |
| TTAGTTACGGGGAGAACGTT+TGG | - | chr8_2:23078153-23078172 | Msa1240540:intron | 45.0% | |
| ! | ACTTTGAGGGACCAAAATGG+TGG | + | chr8_2:23078340-23078359 | None:intergenic | 45.0% |
| GACAGCGAGTTACACTTTGA+GGG | + | chr8_2:23078353-23078372 | None:intergenic | 45.0% | |
| TGACAGCGAGTTACACTTTG+AGG | + | chr8_2:23078354-23078373 | None:intergenic | 45.0% | |
| AGTGTAACTCGCTGTCACAT+TGG | - | chr8_2:23078357-23078376 | Msa1240540:intron | 45.0% | |
| TCCAGTCCTATGTGTTAGAG+GGG | - | chr8_2:23078687-23078706 | Msa1240540:intron | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+TGG | - | chr8_2:23078710-23078729 | Msa1240540:intron | 45.0% | |
| CCCGACAACCTGTTTATAAG+TGG | - | chr8_2:23078749-23078768 | Msa1240540:intron | 45.0% | |
| GACTGCCTCCACTTATAAAC+AGG | + | chr8_2:23078760-23078779 | None:intergenic | 45.0% | |
| CTTCCACTTCTCATGCACTT+GGG | + | chr8_2:23078879-23078898 | None:intergenic | 45.0% | |
| GCCTTTCTCAGTGAGCTTTA+AGG | + | chr8_2:23079218-23079237 | None:intergenic | 45.0% | |
| ! | CACTGAGAAAGGCACATCAA+TGG | - | chr8_2:23079225-23079244 | Msa1240540:CDS | 45.0% |
| GTAAATTGGTGAGGAGATGC+CGG | + | chr8_2:23079314-23079333 | None:intergenic | 45.0% | |
| GAAATTTGTCGGAGGACAGA+AGG | + | chr8_2:23079364-23079383 | None:intergenic | 45.0% | |
| GCAATAGGTAGGGCAGTATA+AGG | + | chr8_2:23079442-23079461 | None:intergenic | 45.0% | |
| GTGAGTGACAGATACACAAG+TGG | + | chr8_2:23079464-23079483 | None:intergenic | 45.0% | |
| TGTCACTCACAACATCCCTA+TGG | - | chr8_2:23079474-23079493 | Msa1240540:intron | 45.0% | |
| !! | GGCACTTCTAAAGCCATTGA+AGG | - | chr8_2:23079526-23079545 | Msa1240540:CDS | 45.0% |
| GTTGCGTAACATAGGGTTGA+AGG | - | chr8_2:23079630-23079649 | Msa1240540:intron | 45.0% | |
| ACAAGGTGGAAGAGAGAATC+TGG | - | chr8_2:23079684-23079703 | Msa1240540:intron | 45.0% | |
| GCTTGATGAGGAGATGGTTA+GGG | - | chr8_2:23079780-23079799 | Msa1240540:intron | 45.0% | |
| CGAAGCTTAGAACCGAAATC+TGG | + | chr8_2:23080268-23080287 | None:intergenic | 45.0% | |
| GATCGTAAGTTTGCCGACAT+CGG | - | chr8_2:23080557-23080576 | Msa1240540:CDS | 45.0% | |
| GCATTACCCTTCATACTGCA+TGG | + | chr8_2:23080594-23080613 | None:intergenic | 45.0% | |
| TATCTCTGGTCCTGGAATTG+TGG | - | chr8_2:23080749-23080768 | Msa1240540:CDS | 45.0% | |
| TTCAGTCCATCCACAATTCC+AGG | + | chr8_2:23080762-23080781 | None:intergenic | 45.0% | |
| AATACTTAGGGTTTGCCTCG+TGG | - | chr8_2:23080871-23080890 | Msa1240540:exon | 45.0% | |
| CTTGCTGAAATGAGTTCAGC+CGG | - | chr8_2:23080910-23080929 | Msa1240540:intron | 45.0% | |
| TGCAGCAGTGAAAATTGCTG+AGG | - | chr8_2:23080960-23080979 | Msa1240540:intron | 45.0% | |
| TGCAACTCCTGGAGTTCAAA+TGG | - | chr8_2:23081065-23081084 | Msa1240540:intron | 45.0% | |
| GTCTACTCTATGAAGGTCCT+GGG | - | chr8_2:23081423-23081442 | Msa1240540:intron | 45.0% | |
| !! | ATTTGTCCGGGTTTTAACCC+AGG | + | chr8_2:23081443-23081462 | None:intergenic | 45.0% |
| !! | GCAAGCCAATTTTTGGGGAA+GGG | - | chr8_2:23081609-23081628 | Msa1240540:intron | 45.0% |
| !! | CAAGCCAATTTTTGGGGAAG+GGG | - | chr8_2:23081610-23081629 | Msa1240540:intron | 45.0% |
| !! | AAGCCAATTTTTGGGGAAGG+GGG | - | chr8_2:23081611-23081630 | Msa1240540:intron | 45.0% |
| AGCTTAGCCATGTAACCTCA+AGG | + | chr8_2:23081695-23081714 | None:intergenic | 45.0% | |
| TACTACTGAGCTAGCATCTC+AGG | - | chr8_2:23081717-23081736 | Msa1240540:intron | 45.0% | |
| CTGAATATTAAAGGGGTGGG+TGG | + | chr8_2:23081925-23081944 | None:intergenic | 45.0% | |
| ! | GTGGGATAAGGTTGTTGTTG+TGG | + | chr8_2:23082042-23082061 | None:intergenic | 45.0% |
| CTTATCCCACTAACTTGGGT+CGG | - | chr8_2:23082052-23082071 | Msa1240540:intron | 45.0% | |
| GACATTATCATAGTCGGACG+TGG | - | chr8_2:23082134-23082153 | Msa1240540:intron | 45.0% | |
| ATGCACTCCATCCTTGAAGA+CGG | + | chr8_2:23082202-23082221 | None:intergenic | 45.0% | |
| CCAAGCTCTTCCATTTGGTT+AGG | + | chr8_2:23082256-23082275 | None:intergenic | 45.0% | |
| CCTAACCAAATGGAAGAGCT+TGG | - | chr8_2:23082253-23082272 | Msa1240540:intron | 45.0% | |
| !! | CATTAAAATAAAAAATATTA+TGG | - | chr8_2:23081503-23081522 | Msa1240540:intron | 5.0% |
| !! | TTAAAATAAAAAATATTATG+GGG | - | chr8_2:23081505-23081524 | Msa1240540:intron | 5.0% |
| GGTGCAAACTTATGCAGCAG+CGG | - | chr8_2:23077663-23077682 | Msa1240540:three_prime_UTR | 50.0% | |
| ATGCAGCAGCGGCAATAACA+AGG | - | chr8_2:23077674-23077693 | Msa1240540:three_prime_UTR | 50.0% | |
| TCAAAGCTATCGGGTCACTC+AGG | - | chr8_2:23078650-23078669 | Msa1240540:intron | 50.0% | |
| CCAGTCCTATGTGTTAGAGG+GGG | - | chr8_2:23078688-23078707 | Msa1240540:intron | 50.0% | |
| ACACACCCCCTCTAACACAT+AGG | + | chr8_2:23078696-23078715 | None:intergenic | 50.0% | |
| TTCTCATGCACTTGGGCACA+TGG | + | chr8_2:23078872-23078891 | None:intergenic | 50.0% | |
| GCTTCCACTTCTCATGCACT+TGG | + | chr8_2:23078880-23078899 | None:intergenic | 50.0% | |
| TATAAGGGACACCGCAGACA+AGG | + | chr8_2:23079426-23079445 | None:intergenic | 50.0% | |
| AGGAAGGCTTGATGAGGAGA+TGG | - | chr8_2:23079774-23079793 | Msa1240540:intron | 50.0% | |
| GGCTTGATGAGGAGATGGTT+AGG | - | chr8_2:23079779-23079798 | Msa1240540:intron | 50.0% | |
| !! | TTTCGGTTCTAAGCTTCGCG+CGG | - | chr8_2:23080270-23080289 | Msa1240540:CDS | 50.0% |
| TGCCGACATCGGTAATACCT+CGG | - | chr8_2:23080568-23080587 | Msa1240540:CDS | 50.0% | |
| GCTCACATTATCTCTGGTCC+TGG | - | chr8_2:23080741-23080760 | Msa1240540:CDS | 50.0% | |
| TCTGGTCCTGGAATTGTGGA+TGG | - | chr8_2:23080753-23080772 | Msa1240540:CDS | 50.0% | |
| TTAGGGTTTGCCTCGTGGAA+AGG | - | chr8_2:23080876-23080895 | Msa1240540:exon | 50.0% | |
| TAGGGTTTGCCTCGTGGAAA+GGG | - | chr8_2:23080877-23080896 | Msa1240540:exon | 50.0% | |
| AGCAACAAACCCTTTCCACG+AGG | + | chr8_2:23080889-23080908 | None:intergenic | 50.0% | |
| ATCTCCCTTGGCAAGGTTAC+CGG | + | chr8_2:23080932-23080951 | None:intergenic | 50.0% | |
| CAGTGTAATCTCCCTTGGCA+AGG | + | chr8_2:23080939-23080958 | None:intergenic | 50.0% | |
| TGCAGCAGTGTAATCTCCCT+TGG | + | chr8_2:23080944-23080963 | None:intergenic | 50.0% | |
| CCTGGAGTTCAAATGGCGAT+CGG | - | chr8_2:23081072-23081091 | Msa1240540:intron | 50.0% | |
| GGTCTACTCTATGAAGGTCC+TGG | - | chr8_2:23081422-23081441 | Msa1240540:intron | 50.0% | |
| GAAGGTCCTGGGTTAAAACC+CGG | - | chr8_2:23081434-23081453 | Msa1240540:intron | 50.0% | |
| !! | GGCAAGCCAATTTTTGGGGA+AGG | - | chr8_2:23081608-23081627 | Msa1240540:intron | 50.0% |
| TCTCCCCCTTCCCCAAAAAT+TGG | + | chr8_2:23081617-23081636 | None:intergenic | 50.0% | |
| GGCATGCAGTAACTAGGTTG+TGG | - | chr8_2:23081884-23081903 | Msa1240540:intron | 50.0% | |
| CGACCCAAGTTAGTGGGATA+AGG | + | chr8_2:23082054-23082073 | None:intergenic | 50.0% | |
| GATAGCCGACCCAAGTTAGT+GGG | + | chr8_2:23082060-23082079 | None:intergenic | 50.0% | |
| AGATAGCCGACCCAAGTTAG+TGG | + | chr8_2:23082061-23082080 | None:intergenic | 50.0% | |
| GCGAATACCGTCTTCAAGGA+TGG | - | chr8_2:23082192-23082211 | Msa1240540:intron | 50.0% | |
| CACACCCAAGCTCTTCCATT+TGG | + | chr8_2:23082261-23082280 | None:intergenic | 50.0% | |
| CCCCCTCTAACACATAGGAC+TGG | + | chr8_2:23078691-23078710 | None:intergenic | 55.0% | |
| GTGCCCAAGTGCATGAGAAG+TGG | - | chr8_2:23078873-23078892 | Msa1240540:intron | 55.0% | |
| CCTTGCGGCGCATAACCATA+GGG | + | chr8_2:23079492-23079511 | None:intergenic | 55.0% | |
| TCCTTGCGGCGCATAACCAT+AGG | + | chr8_2:23079493-23079512 | None:intergenic | 55.0% | |
| CTGCGCCGTTGCGTAACATA+GGG | - | chr8_2:23079623-23079642 | Msa1240540:intron | 55.0% | |
| CTCTGTTTGGCTGCGGATGT+TGG | - | chr8_2:23079958-23079977 | Msa1240540:intron | 55.0% | |
| ! | GGCCGAGGTATTACCGATGT+CGG | + | chr8_2:23080573-23080592 | None:intergenic | 55.0% |
| ACCTCGGCCATGCAGTATGA+AGG | - | chr8_2:23080584-23080603 | Msa1240540:CDS | 55.0% | |
| CCTCGGCCATGCAGTATGAA+GGG | - | chr8_2:23080585-23080604 | Msa1240540:CDS | 55.0% | |
| TTCAGCCGGTAACCTTGCCA+AGG | - | chr8_2:23080924-23080943 | Msa1240540:intron | 55.0% | |
| TCAGCCGGTAACCTTGCCAA+GGG | - | chr8_2:23080925-23080944 | Msa1240540:intron | 55.0% | |
| TCAATCCAGCGTCGTGGTCT+AGG | - | chr8_2:23081016-23081035 | Msa1240540:intron | 55.0% | |
| CAATCCAGCGTCGTGGTCTA+GGG | - | chr8_2:23081017-23081036 | Msa1240540:intron | 55.0% | |
| CCGATCGCCATTTGAACTCC+AGG | + | chr8_2:23081075-23081094 | None:intergenic | 55.0% | |
| GGAGTTCAAATGGCGATCGG+TGG | - | chr8_2:23081075-23081094 | Msa1240540:intron | 55.0% | |
| CAAATGGCGATCGGTGGTGA+TGG | - | chr8_2:23081081-23081100 | Msa1240540:intron | 55.0% | |
| !! | GCGATCGGTGGTGATGGTTT+GGG | - | chr8_2:23081087-23081106 | Msa1240540:intron | 55.0% |
| !! | CGATCGGTGGTGATGGTTTG+GGG | - | chr8_2:23081088-23081107 | Msa1240540:intron | 55.0% |
| GCTCGCGAATACCGTCTTCA+AGG | - | chr8_2:23082188-23082207 | Msa1240540:intron | 55.0% | |
| CCCTATGGTTATGCGCCGCA+AGG | - | chr8_2:23079489-23079508 | Msa1240540:intron | 60.0% | |
| GCTGCGCCGTTGCGTAACAT+AGG | - | chr8_2:23079622-23079641 | Msa1240540:intron | 60.0% | |
| CCCTTCATACTGCATGGCCG+AGG | + | chr8_2:23080588-23080607 | None:intergenic | 60.0% | |
| TCTCGGTCAATCCAGCGTCG+TGG | - | chr8_2:23081010-23081029 | Msa1240540:intron | 60.0% | |
| !! | GGCGATCGGTGGTGATGGTT+TGG | - | chr8_2:23081086-23081105 | Msa1240540:intron | 60.0% |
| TATTCGCGAGCTGCTGCAGC+CGG | + | chr8_2:23082179-23082198 | None:intergenic | 60.0% | |
| AGTGCCCTAGACCACGACGC+TGG | + | chr8_2:23081024-23081043 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 23077624 | 23082502 | 23077624 | ID=Msa1240540;Name=Msa1240540 |
| chr8_2 | mRNA | 23077624 | 23082502 | 23077624 | ID=Msa1240540-mRNA-1;Parent=Msa1240540;Name=Msa1240540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=113|1|1|1|0.66|0.57|7|261|469 |
| chr8_2 | exon | 23077624 | 23078013 | 23077624 | ID=Msa1240540-mRNA-1:exon:8271;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23078992 | 23079246 | 23078992 | ID=Msa1240540-mRNA-1:exon:8270;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23079338 | 23079425 | 23079338 | ID=Msa1240540-mRNA-1:exon:8269;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23079520 | 23079602 | 23079520 | ID=Msa1240540-mRNA-1:exon:8268;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23079835 | 23079918 | 23079835 | ID=Msa1240540-mRNA-1:exon:8267;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23080112 | 23080923 | 23080112 | ID=Msa1240540-mRNA-1:exon:8266;Parent=Msa1240540-mRNA-1 |
| chr8_2 | exon | 23082431 | 23082502 | 23082431 | ID=Msa1240540-mRNA-1:exon:8265;Parent=Msa1240540-mRNA-1 |
| chr8_2 | five_prime_UTR | 23082431 | 23082502 | 23082431 | ID=Msa1240540-mRNA-1:five_prime_utr;Parent=Msa1240540-mRNA-1 |
| chr8_2 | five_prime_UTR | 23080883 | 23080923 | 23080883 | ID=Msa1240540-mRNA-1:five_prime_utr;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23080112 | 23080882 | 23080112 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23079835 | 23079918 | 23079835 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23079520 | 23079602 | 23079520 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23079338 | 23079425 | 23079338 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23078992 | 23079246 | 23078992 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | CDS | 23077885 | 23078013 | 23077885 | ID=Msa1240540-mRNA-1:cds;Parent=Msa1240540-mRNA-1 |
| chr8_2 | three_prime_UTR | 23077624 | 23077884 | 23077624 | ID=Msa1240540-mRNA-1:three_prime_utr;Parent=Msa1240540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
