AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1293780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293780 MtrunA17_Chr8g0369951 56.966 323 104 3 50 342 1 318 8.42e-130 373
Msa1293780 MtrunA17_Chr5g0407691 55.140 321 110 2 51 342 6 321 2.34e-127 367
Msa1293780 MtrunA17_Chr8g0369941 68.304 224 7 3 178 342 1 219 1.10e-95 283
Msa1293780 MtrunA17_Chr1g0163481 73.333 195 47 3 50 243 1 191 3.39e-94 280
Msa1293780 MtrunA17_Chr8g0369931 98.095 105 2 0 50 154 1 105 2.05e-68 209
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293780 AT3G51520.1 47.097 310 129 3 62 342 11 314 1.43e-100 299

Find 60 sgRNAs with CRISPR-Local

Find 602 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACAAGAAATCTTATATT+TGG 0.172290 8_3:-51263064 None:intergenic
AGATCTTTCCATTATTATTC+TGG 0.193871 8_3:+51264087 Msa1293780:CDS
GTCCATATTTGTCTTAAATA+TGG 0.246667 8_3:-51263238 None:intergenic
TGTGGATAAGAACAGTTTAT+TGG 0.250541 8_3:+51258415 Msa1293780:CDS
TTTCTTCCTATATGGATATA+TGG 0.258389 8_3:+51256754 Msa1293780:CDS
TTCCATCTTAATCAACCTTA+TGG 0.288730 8_3:+51258643 Msa1293780:CDS
TTATTATTCTGGGGAAAATT+CGG 0.300237 8_3:+51264098 Msa1293780:CDS
GGAATCTTCTCAACCTGAAT+TGG 0.308102 8_3:-51264866 None:intergenic
GCCTGCTCTGATGTTGGTTC+TGG 0.308909 8_3:-51264887 None:intergenic
TACCATATTTAAGACAAATA+TGG 0.339295 8_3:+51263236 Msa1293780:CDS
TATAAGTGGTGGAAGGCTTC+TGG 0.341011 8_3:+51264032 Msa1293780:CDS
AGAAATCTTATATTTGGAAT+AGG 0.347397 8_3:-51263058 None:intergenic
CCACATTCAGTCTTCCCATT+TGG 0.357900 8_3:+51263001 Msa1293780:CDS
GTAGCATTAACTTTGTGTTT+TGG 0.361884 8_3:+51258200 Msa1293780:CDS
TTGCGAGGAAATGAGGTATT+TGG 0.362850 8_3:+51258149 Msa1293780:CDS
TATTATTCTGGGGAAAATTC+GGG 0.367807 8_3:+51264099 Msa1293780:CDS
GATCTTTCCATTATTATTCT+GGG 0.370352 8_3:+51264088 Msa1293780:CDS
GTGGATAAGAACAGTTTATT+GGG 0.373417 8_3:+51258416 Msa1293780:CDS
CCCCATCACACTTCACTTGG+AGG 0.407649 8_3:+51258609 Msa1293780:CDS
AGACAAATATGGACATGGTT+AGG 0.408270 8_3:+51263247 Msa1293780:CDS
TTAATTTCTTTGTTGGTAGC+TGG 0.420608 8_3:+51263295 Msa1293780:CDS
AACCATAAGGTTGATTAAGA+TGG 0.439395 8_3:-51258645 None:intergenic
GGTGGTGGGTAAACCAATTC+AGG 0.442053 8_3:+51264853 Msa1293780:CDS
AACAAACTCACTATGTACTT+TGG 0.442455 8_3:-51265315 None:intergenic
GTTCCACCATATATCCATAT+AGG 0.464540 8_3:-51256760 None:intergenic
ACATACAATGGATTCTTGAA+TGG 0.469129 8_3:-51264830 None:intergenic
TATTTGGTGAATCATGCAAT+TGG 0.471420 8_3:+51258165 Msa1293780:CDS
TTTGTTAATAGGGGTTGTCA+TGG 0.489577 8_3:+51265234 Msa1293780:intron
GTTGTTTATGATTCTTCCTG+TGG 0.497559 8_3:+51258397 Msa1293780:CDS
GAATCCATTGTATGTGGTGG+TGG 0.497824 8_3:+51264838 Msa1293780:CDS
AATGGATTCTTGAATGGTAC+AGG 0.498388 8_3:-51264824 None:intergenic
TCCTCCAAGTGAAGTGTGAT+GGG 0.501289 8_3:-51258610 None:intergenic
TTTCCCCATCACACTTCACT+TGG 0.516494 8_3:+51258606 Msa1293780:CDS
CCATATAGGAAGAAAACATC+AGG 0.517063 8_3:-51256746 None:intergenic
AATAAACTGTTCTTATCCAC+AGG 0.525451 8_3:-51258413 None:intergenic
GAACGATACAAGACTCAAGC+TGG 0.531376 8_3:+51265359 Msa1293780:CDS
AAAAGTGTTGCGAGGAAATG+AGG 0.537517 8_3:+51258142 Msa1293780:CDS
CTTCCTATATGGATATATGG+TGG 0.539315 8_3:+51256757 Msa1293780:CDS
TCCAGAACCAACATCAGAGC+AGG 0.542018 8_3:+51264886 Msa1293780:CDS
TTACCCACCACCACATACAA+TGG 0.555274 8_3:-51264842 None:intergenic
ATCTTTCCATTATTATTCTG+GGG 0.556642 8_3:+51264089 Msa1293780:CDS
ATTCAAGAATCCATTGTATG+TGG 0.565867 8_3:+51264832 Msa1293780:CDS
AGTGTTTCTCGCATTCCACC+AGG 0.566558 8_3:-51263337 None:intergenic
GTCATCACTAAAATATGAAG+AGG 0.577292 8_3:+51256808 Msa1293780:CDS
CGTAGACAGATATTTATAAG+TGG 0.577657 8_3:+51264018 Msa1293780:intron
AGACAGATATTTATAAGTGG+TGG 0.577944 8_3:+51264021 Msa1293780:intron
AGTTAATTCAAAATCTTGCA+AGG 0.577968 8_3:+51264057 Msa1293780:CDS
TAACACAACAAAACATAACA+TGG 0.592079 8_3:+51258118 Msa1293780:CDS
AGATATTTATAAGTGGTGGA+AGG 0.609011 8_3:+51264025 Msa1293780:CDS
GTACATGCCTGCTCTGATGT+TGG 0.609247 8_3:-51264893 None:intergenic
ATCCTCCAAGTGAAGTGTGA+TGG 0.611933 8_3:-51258611 None:intergenic
GAAGAATCATAAACAACATG+AGG 0.619475 8_3:-51258391 None:intergenic
ATGAAGAGGCTAATATGTCA+AGG 0.620983 8_3:+51256822 Msa1293780:CDS
ATTTAAGACAAATATGGACA+TGG 0.624707 8_3:+51263242 Msa1293780:CDS
CCAAATGGGAAGACTGAATG+TGG 0.648074 8_3:-51263001 None:intergenic
CAAGAATCCATTGTATGTGG+TGG 0.680708 8_3:+51264835 Msa1293780:CDS
AGTTGCATTATAGTACCTGG+TGG 0.685008 8_3:+51263322 Msa1293780:CDS
AATCCATTGTATGTGGTGGT+GGG 0.689098 8_3:+51264839 Msa1293780:CDS
GATAGTTGCATTATAGTACC+TGG 0.700909 8_3:+51263319 Msa1293780:CDS
CCTCCAAGTGAAGTGTGATG+GGG 0.703428 8_3:-51258609 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTAAAATAAATAAAA+AGG - chr8_3:51257543-51257562 None:intergenic 0.0%
!! TAAATGCATTATTATATATT+AGG - chr8_3:51256865-51256884 None:intergenic 10.0%
!!! TGCTTTTTTTTTTTTTTATT+AGG + chr8_3:51256957-51256976 Msa1293780:intron 10.0%
!!! GCTTTTTTTTTTTTTTATTA+GGG + chr8_3:51256958-51256977 Msa1293780:intron 10.0%
!!! CTTTTTTTTTTTTTTATTAG+GGG + chr8_3:51256959-51256978 Msa1293780:intron 10.0%
!! AAAAAAATTAATTAAGCTAA+AGG - chr8_3:51258475-51258494 None:intergenic 10.0%
!! TGAAAATTGTATTTATTTAT+AGG - chr8_3:51258686-51258705 None:intergenic 10.0%
!!! AGATCTATATATATTTTTTA+AGG - chr8_3:51259922-51259941 None:intergenic 10.0%
!!! TTTTAATTTTTATATTGAGT+TGG + chr8_3:51260637-51260656 Msa1293780:intron 10.0%
!! TCTTAAAAAAAAATAAGAAT+TGG - chr8_3:51260777-51260796 None:intergenic 10.0%
!!! TATTTTGAAACAATTTTTTT+TGG + chr8_3:51261689-51261708 Msa1293780:intron 10.0%
!!! TTATATTTTAATTGTTTTCT+TGG + chr8_3:51263189-51263208 Msa1293780:intron 10.0%
!! AAATATATAATTGCATATAT+TGG + chr8_3:51263445-51263464 Msa1293780:intron 10.0%
!!! TTATTTGGTTATTTTATATA+AGG + chr8_3:51263817-51263836 Msa1293780:intron 10.0%
!!! TTTTTTATTTTTGTTAATAG+GGG + chr8_3:51265225-51265244 Msa1293780:intron 10.0%
!!! TAAAATAAATAAAAAGGTGT+TGG - chr8_3:51257537-51257556 None:intergenic 15.0%
!! TTAAATTTCCAATAATAACT+TGG - chr8_3:51257572-51257591 None:intergenic 15.0%
!! CAATTAAAAAAGGAAATAAT+TGG - chr8_3:51258504-51258523 None:intergenic 15.0%
!! AAACTATCATTGATATTTAA+AGG + chr8_3:51259251-51259270 Msa1293780:intron 15.0%
!! TTTAAAAAACTTATTCAATG+CGG + chr8_3:51259377-51259396 Msa1293780:intron 15.0%
!! ATTCTTCAATTATTGAAAAT+GGG - chr8_3:51260019-51260038 None:intergenic 15.0%
!! GTAAACAGTAAAAAAAATTA+AGG - chr8_3:51260268-51260287 None:intergenic 15.0%
!!! TTTGATTTGATTATTCATTT+TGG + chr8_3:51260845-51260864 Msa1293780:intron 15.0%
!! CTGTTAATAAAAAAAATGAA+CGG + chr8_3:51261097-51261116 Msa1293780:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_3:51261563-51261582 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_3:51261562-51261581 Msa1293780:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8_3:51261586-51261605 Msa1293780:intron 15.0%
!!! ATTTTATTCACTTTCTTTTT+TGG + chr8_3:51262185-51262204 Msa1293780:intron 15.0%
!!! AAATCTAGCTTATATTAAAT+TGG - chr8_3:51262339-51262358 None:intergenic 15.0%
!!! CAATTAAATTTGTTATTTGA+CGG + chr8_3:51262439-51262458 Msa1293780:intron 15.0%
!!! TTTTTTGTCAAGTAATTTAT+TGG + chr8_3:51262734-51262753 Msa1293780:intron 15.0%
!!! GAAAAATTTAATTTCTTTGT+TGG + chr8_3:51263288-51263307 Msa1293780:CDS 15.0%
!! AATATTTAAGTAAAAGTTCA+GGG - chr8_3:51263853-51263872 None:intergenic 15.0%
!! TAATATTTAAGTAAAAGTTC+AGG - chr8_3:51263854-51263873 None:intergenic 15.0%
!!! TTTTGAATGACATAAAAATT+GGG - chr8_3:51264973-51264992 None:intergenic 15.0%
!!! GAAAAAACGATATTTTTATT+TGG - chr8_3:51265031-51265050 None:intergenic 15.0%
!!! ATCTTCAAAATATTTTTAGT+TGG - chr8_3:51265199-51265218 None:intergenic 15.0%
!!! TTATTTATCCTTTTTTACTT+TGG + chr8_3:51265282-51265301 Msa1293780:intron 15.0%
!!! TTAGTTTTATCCAATAATCA+GGG - chr8_3:51257030-51257049 None:intergenic 20.0%
!!! ATTAGTTTTATCCAATAATC+AGG - chr8_3:51257031-51257050 None:intergenic 20.0%
!! ATTATTGGATAAAACTAATC+TGG + chr8_3:51257032-51257051 Msa1293780:intron 20.0%
!!! CCTAAAGTTTTATTGATTTT+GGG - chr8_3:51257088-51257107 None:intergenic 20.0%
!!! TCCTAAAGTTTTATTGATTT+TGG - chr8_3:51257089-51257108 None:intergenic 20.0%
!! AAATCTAACCAAGTTATTAT+TGG + chr8_3:51257561-51257580 Msa1293780:intron 20.0%
!!! TCATAGTATTTCCTTTTTTT+GGG - chr8_3:51257953-51257972 None:intergenic 20.0%
!! AAAAAAAGGAAATACTATGA+GGG + chr8_3:51257953-51257972 Msa1293780:intron 20.0%
!!! TCTTTTTATTTTTCTTCTCT+TGG + chr8_3:51258316-51258335 Msa1293780:intron 20.0%
!!! TTAATTACCTGGATAATTTT+TGG - chr8_3:51258442-51258461 None:intergenic 20.0%
!!! ATTATCCAGGTAATTAATTT+TGG + chr8_3:51258445-51258464 Msa1293780:intron 20.0%
!!! TTATCCAGGTAATTAATTTT+GGG + chr8_3:51258446-51258465 Msa1293780:intron 20.0%
!! AATACAAATTACAAACCATA+AGG - chr8_3:51258661-51258680 None:intergenic 20.0%
!! AAAGGATATTAGAATATGTT+GGG - chr8_3:51258747-51258766 None:intergenic 20.0%
!! TCACTAAATAAACTCAAATA+AGG - chr8_3:51258797-51258816 None:intergenic 20.0%
!!! CAATTTTCACAAAAAAAATC+AGG + chr8_3:51258866-51258885 Msa1293780:intron 20.0%
!!! AAAAGTAATTTTCTGCATTT+GGG - chr8_3:51259188-51259207 None:intergenic 20.0%
!!! AAAAAGTAATTTTCTGCATT+TGG - chr8_3:51259189-51259208 None:intergenic 20.0%
!!! CAATGATAGTTTTTATAACA+CGG - chr8_3:51259243-51259262 None:intergenic 20.0%
!! TTAAAAAACTTATTCAATGC+GGG + chr8_3:51259378-51259397 Msa1293780:intron 20.0%
!!! GCAGTTTTCAAATAAAAAAA+CGG - chr8_3:51259598-51259617 None:intergenic 20.0%
!! AATTGAAAAAAGAATACATG+AGG - chr8_3:51259891-51259910 None:intergenic 20.0%
!!! GAAATTATAGCAAGATATTT+TGG + chr8_3:51259982-51260001 Msa1293780:intron 20.0%
!! CATTCTTCAATTATTGAAAA+TGG - chr8_3:51260020-51260039 None:intergenic 20.0%
!!! TTCAAACTAAGATTTGTTTT+TGG + chr8_3:51260688-51260707 Msa1293780:intron 20.0%
!!! AGAGTGTGATTATTTTTTTT+TGG + chr8_3:51261017-51261036 Msa1293780:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - chr8_3:51261158-51261177 None:intergenic 20.0%
!!! TATTAATTAGGGGTATATTT+AGG - chr8_3:51261231-51261250 None:intergenic 20.0%
!! AAGATAGTAGTATTAATTAG+GGG - chr8_3:51261241-51261260 None:intergenic 20.0%
!! CAAGATAGTAGTATTAATTA+GGG - chr8_3:51261242-51261261 None:intergenic 20.0%
!! ACAAGATAGTAGTATTAATT+AGG - chr8_3:51261243-51261262 None:intergenic 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG + chr8_3:51261360-51261379 Msa1293780:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr8_3:51261529-51261548 Msa1293780:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_3:51261572-51261591 None:intergenic 20.0%
!! TTTAAAAGTAATACTTTGGA+AGG + chr8_3:51261590-51261609 Msa1293780:intron 20.0%
!! AGAAAATGTTATTATTGCAT+TGG + chr8_3:51261649-51261668 Msa1293780:intron 20.0%
!! ATTCTAGTAGAAGTTAAAAA+TGG - chr8_3:51262111-51262130 None:intergenic 20.0%
!!! TTTCTTTTTTGGTACAAAAA+AGG + chr8_3:51262196-51262215 Msa1293780:intron 20.0%
!! AGTAAATTGAATAAAGTTGT+TGG - chr8_3:51262228-51262247 None:intergenic 20.0%
!! ATTTAATGAGAAAGTAAGAA+AGG - chr8_3:51262295-51262314 None:intergenic 20.0%
!! TCTCATTAAATTGTAACAAA+AGG + chr8_3:51262304-51262323 Msa1293780:intron 20.0%
!! ATCAAGAATTTATCAAGAAA+AGG + chr8_3:51262409-51262428 Msa1293780:intron 20.0%
!! CGTCAAATAACAAATTTAAT+TGG - chr8_3:51262441-51262460 None:intergenic 20.0%
!! GTCATTAAATGATTGAATAT+TGG - chr8_3:51262589-51262608 None:intergenic 20.0%
!! TTAATGTTGTCAATATATAC+AGG + chr8_3:51262679-51262698 Msa1293780:intron 20.0%
!!! AGAAATCTTATATTTGGAAT+AGG - chr8_3:51263061-51263080 None:intergenic 20.0%
!! CTAACAAGAAATCTTATATT+TGG - chr8_3:51263067-51263086 None:intergenic 20.0%
!!! TACCATATTTAAGACAAATA+TGG + chr8_3:51263236-51263255 Msa1293780:CDS 20.0%
!! CATCGTATATATTTCTTATT+AGG - chr8_3:51263527-51263546 None:intergenic 20.0%
!! GTATATCTTAAAGAAAGAAA+AGG + chr8_3:51263557-51263576 Msa1293780:intron 20.0%
!! AATTTCAAATTCTATTTGAG+AGG - chr8_3:51263738-51263757 None:intergenic 20.0%
!!! ATTCATATTTTGAATTTAGC+AGG - chr8_3:51263792-51263811 None:intergenic 20.0%
!! AATATAGAGGATATATTTGT+CGG - chr8_3:51263949-51263968 None:intergenic 20.0%
!! AAGAAATCACTTTATACAAT+AGG - chr8_3:51264238-51264257 None:intergenic 20.0%
!! TTCAGAACATGAATATTAAA+GGG - chr8_3:51264527-51264546 None:intergenic 20.0%
!! ATTCAGAACATGAATATTAA+AGG - chr8_3:51264528-51264547 None:intergenic 20.0%
!!! TCTCACTTATTTTTTTTTTG+AGG + chr8_3:51264668-51264687 Msa1293780:intron 20.0%
!!! CTCACTTATTTTTTTTTTGA+GGG + chr8_3:51264669-51264688 Msa1293780:intron 20.0%
!! AAGTCTTACACTAAATTAAA+TGG - chr8_3:51264731-51264750 None:intergenic 20.0%
!!! CTTTTGAATGACATAAAAAT+TGG - chr8_3:51264974-51264993 None:intergenic 20.0%
!!! GTATATACTTTTTTTAACCA+AGG - chr8_3:51265006-51265025 None:intergenic 20.0%
!!! AAAACGATATTTTTATTTGG+AGG - chr8_3:51265028-51265047 None:intergenic 20.0%
!!! TAGTTTTTTAAAAATGTGAG+TGG + chr8_3:51265080-51265099 Msa1293780:intron 20.0%
! TTTCTTCCTATATGGATATA+TGG + chr8_3:51256754-51256773 Msa1293780:CDS 25.0%
! AGCATCTTCTATTTAATGTT+GGG - chr8_3:51256941-51256960 None:intergenic 25.0%
! AAGCATCTTCTATTTAATGT+TGG - chr8_3:51256942-51256961 None:intergenic 25.0%
!!! CAGGGTTGTTTTAATTAAAT+TGG - chr8_3:51257012-51257031 None:intergenic 25.0%
! ATTAAAACAACCCTGATTAT+TGG + chr8_3:51257017-51257036 Msa1293780:intron 25.0%
!!! AAGTTTTATTGATTTTGGGT+TGG - chr8_3:51257084-51257103 None:intergenic 25.0%
! CCCAAAATCAATAAAACTTT+AGG + chr8_3:51257085-51257104 Msa1293780:intron 25.0%
!! TTTTCCAAACTTTATTGCAT+TGG + chr8_3:51257874-51257893 Msa1293780:intron 25.0%
! AACTTACATTACCCAAAAAA+AGG + chr8_3:51257939-51257958 Msa1293780:intron 25.0%
!!! CTCATAGTATTTCCTTTTTT+TGG - chr8_3:51257954-51257973 None:intergenic 25.0%
! CAAAAAAAGGAAATACTATG+AGG + chr8_3:51257952-51257971 Msa1293780:intron 25.0%
!! ATAAATGAGTCAATCTCTTT+TGG - chr8_3:51258066-51258085 None:intergenic 25.0%
! TAACACAACAAAACATAACA+TGG + chr8_3:51258118-51258137 Msa1293780:CDS 25.0%
!! GAATCTGAAATGAAAACAAA+AGG - chr8_3:51258563-51258582 None:intergenic 25.0%
!!! AACACTTTTTTCTTCTATCT+AGG + chr8_3:51258719-51258738 Msa1293780:intron 25.0%
! CAAAGGATATTAGAATATGT+TGG - chr8_3:51258748-51258767 None:intergenic 25.0%
! CAACATATTCTAATATCCTT+TGG + chr8_3:51258746-51258765 Msa1293780:intron 25.0%
! TAAAAAACTTATTCAATGCG+GGG + chr8_3:51259379-51259398 Msa1293780:intron 25.0%
!!! GTATTTTGGTCAATTTGTTT+GGG - chr8_3:51259647-51259666 None:intergenic 25.0%
! ATGTGTAACTAAAGTTGTTT+AGG + chr8_3:51259831-51259850 Msa1293780:intron 25.0%
!! TTTTGTGAATTATGTATGGT+TGG - chr8_3:51259952-51259971 None:intergenic 25.0%
!!! AGAGTTTTGTGAATTATGTA+TGG - chr8_3:51259956-51259975 None:intergenic 25.0%
!! TTTTTACTGTTTACATGTCA+TGG + chr8_3:51260274-51260293 Msa1293780:intron 25.0%
! CTAATCAAAATACTCTTAAG+AGG - chr8_3:51260574-51260593 None:intergenic 25.0%
!! AGTGAACAATTTTATATGAG+AGG + chr8_3:51260604-51260623 Msa1293780:intron 25.0%
! AATGCAGAAGTTGTTTATTT+GGG - chr8_3:51260670-51260689 None:intergenic 25.0%
!! GATTTGATTATTCATTTTGG+AGG + chr8_3:51260848-51260867 Msa1293780:intron 25.0%
! ATCACACTTATTCATCTTTA+AGG - chr8_3:51261072-51261091 None:intergenic 25.0%
! GGGACAAAAATAAAATCAAA+TGG - chr8_3:51261159-51261178 None:intergenic 25.0%
! TGCATGTAGTAATTTGAAAA+GGG - chr8_3:51261193-51261212 None:intergenic 25.0%
! ATGCATGTAGTAATTTGAAA+AGG - chr8_3:51261194-51261213 None:intergenic 25.0%
! AAGATAGAAGAGAGAAAAAA+TGG + chr8_3:51261849-51261868 Msa1293780:intron 25.0%
!! CATTTTGTTCTACTTAAACT+TGG - chr8_3:51261967-51261986 None:intergenic 25.0%
!! ATTGTACTTTCTGATTTTGT+TGG + chr8_3:51261999-51262018 Msa1293780:intron 25.0%
! TAAAAATGGTATAATCCTTG+TGG - chr8_3:51262097-51262116 None:intergenic 25.0%
!! AGAACATTTTGAACATTTTG+CGG - chr8_3:51262262-51262281 None:intergenic 25.0%
! CATACTCAACAAAACTTTAT+GGG - chr8_3:51262562-51262581 None:intergenic 25.0%
! TCATACTCAACAAAACTTTA+TGG - chr8_3:51262563-51262582 None:intergenic 25.0%
! ACTTGACAAAAAAAGTTCAT+AGG - chr8_3:51262727-51262746 None:intergenic 25.0%
!! ATTGTTTTCTTGGCATTTTA+TGG + chr8_3:51263199-51263218 Msa1293780:intron 25.0%
! GTCCATATTTGTCTTAAATA+TGG - chr8_3:51263241-51263260 None:intergenic 25.0%
!! ATTTAAGACAAATATGGACA+TGG + chr8_3:51263242-51263261 Msa1293780:CDS 25.0%
! ATGAAGAAAACAAGTATCAT+AGG - chr8_3:51263670-51263689 None:intergenic 25.0%
!! AATCTTCTTTTAGACACTTT+CGG + chr8_3:51263697-51263716 Msa1293780:intron 25.0%
!!! GGTTATTTTATATAAGGACT+CGG + chr8_3:51263823-51263842 Msa1293780:intron 25.0%
! TATGATAGATTGATAGATAC+TGG - chr8_3:51263901-51263920 None:intergenic 25.0%
! ATATAGAGGATATATTTGTC+GGG - chr8_3:51263948-51263967 None:intergenic 25.0%
! AGCAGAAATATCTAATATAG+AGG - chr8_3:51263962-51263981 None:intergenic 25.0%
! AGTTAATTCAAAATCTTGCA+AGG + chr8_3:51264057-51264076 Msa1293780:CDS 25.0%
! AGATCTTTCCATTATTATTC+TGG + chr8_3:51264087-51264106 Msa1293780:CDS 25.0%
! GATCTTTCCATTATTATTCT+GGG + chr8_3:51264088-51264107 Msa1293780:CDS 25.0%
! ATCTTTCCATTATTATTCTG+GGG + chr8_3:51264089-51264108 Msa1293780:CDS 25.0%
!! AATTTTCCCCAGAATAATAA+TGG - chr8_3:51264098-51264117 None:intergenic 25.0%
!! TTATTATTCTGGGGAAAATT+CGG + chr8_3:51264098-51264117 Msa1293780:CDS 25.0%
! TGAAAACAAAAGTAAAGAGA+TGG - chr8_3:51264154-51264173 None:intergenic 25.0%
! CATTTAGACATGAATTTCTT+TGG - chr8_3:51264195-51264214 None:intergenic 25.0%
!!! ATTTTGGGATGGAAATAATT+GGG - chr8_3:51264924-51264943 None:intergenic 25.0%
!!! TGTACTTCTAAAGTGATTTT+GGG - chr8_3:51264939-51264958 None:intergenic 25.0%
!!! TATACTTTTTTTAACCAAGG+AGG - chr8_3:51265003-51265022 None:intergenic 25.0%
! GATTAGTGTGTACATATAAA+TGG - chr8_3:51265110-51265129 None:intergenic 25.0%
! TGACTGTTAACATCAAATAT+GGG - chr8_3:51265138-51265157 None:intergenic 25.0%
! TACAAAAATAAGTGACCTAA+AGG + chr8_3:51265165-51265184 Msa1293780:intron 25.0%
!!! TCCTTTTTTACTTTGGTTTT+AGG + chr8_3:51265289-51265308 Msa1293780:intron 25.0%
! ACCTAAAACCAAAGTAAAAA+AGG - chr8_3:51265293-51265312 None:intergenic 25.0%
GTCATCACTAAAATATGAAG+AGG + chr8_3:51256808-51256827 Msa1293780:CDS 30.0%
TGAATGGTAAATGTAGAACA+GGG - chr8_3:51257235-51257254 None:intergenic 30.0%
!! CACAGTTGGCAAATTTTAAT+TGG - chr8_3:51257813-51257832 None:intergenic 30.0%
!!! AGAATTTTTCAAGACACAGT+TGG - chr8_3:51257827-51257846 None:intergenic 30.0%
CAATCCAATGCAATAAAGTT+TGG - chr8_3:51257881-51257900 None:intergenic 30.0%
CAAACTTTATTGCATTGGAT+TGG + chr8_3:51257879-51257898 Msa1293780:intron 30.0%
! TATTGCATTGGATTGGATAA+CGG + chr8_3:51257886-51257905 Msa1293780:intron 30.0%
TCTATGTGATGTAATTGGTT+TGG - chr8_3:51258093-51258112 None:intergenic 30.0%
TGTTCTCTATGTGATGTAAT+TGG - chr8_3:51258098-51258117 None:intergenic 30.0%
! TATTTGGTGAATCATGCAAT+TGG + chr8_3:51258165-51258184 Msa1293780:CDS 30.0%
! GTAGCATTAACTTTGTGTTT+TGG + chr8_3:51258200-51258219 Msa1293780:CDS 30.0%
GAAGAATCATAAACAACATG+AGG - chr8_3:51258394-51258413 None:intergenic 30.0%
AATAAACTGTTCTTATCCAC+AGG - chr8_3:51258416-51258435 None:intergenic 30.0%
TGTGGATAAGAACAGTTTAT+TGG + chr8_3:51258415-51258434 Msa1293780:CDS 30.0%
GTGGATAAGAACAGTTTATT+GGG + chr8_3:51258416-51258435 Msa1293780:CDS 30.0%
GAAACCCAAAATTAATTACC+TGG - chr8_3:51258453-51258472 None:intergenic 30.0%
TTCCATCTTAATCAACCTTA+TGG + chr8_3:51258643-51258662 Msa1293780:CDS 30.0%
! AACCATAAGGTTGATTAAGA+TGG - chr8_3:51258648-51258667 None:intergenic 30.0%
! ATTTTGTGAGACTGTTTATG+AGG + chr8_3:51258822-51258841 Msa1293780:intron 30.0%
CTTATGTATAAGCGCTTATT+AGG + chr8_3:51258986-51259005 Msa1293780:intron 30.0%
! TTTTCCCCAATTTCAAAACA+CGG + chr8_3:51259105-51259124 Msa1293780:intron 30.0%
! GATATGCCATGTTATTTGTT+TGG + chr8_3:51259212-51259231 Msa1293780:intron 30.0%
GCATTACCAAACAAATAACA+TGG - chr8_3:51259221-51259240 None:intergenic 30.0%
ATGCATTACAACATTTCTCT+AGG + chr8_3:51259327-51259346 Msa1293780:intron 30.0%
TGCATTACAACATTTCTCTA+GGG + chr8_3:51259328-51259347 Msa1293780:intron 30.0%
ACGAGTAAGTATATGAGAAT+CGG + chr8_3:51259486-51259505 Msa1293780:intron 30.0%
!!! GGTATTTTGGTCAATTTGTT+TGG - chr8_3:51259648-51259667 None:intergenic 30.0%
GAATGCAGAAGTTGTTTATT+TGG - chr8_3:51260671-51260690 None:intergenic 30.0%
!! TTTTTGGTCAAGTAGTCTAT+TGG + chr8_3:51261033-51261052 Msa1293780:intron 30.0%
TGAAAAGGGGTTTACATTTA+GGG - chr8_3:51261179-51261198 None:intergenic 30.0%
TTGAAAAGGGGTTTACATTT+AGG - chr8_3:51261180-51261199 None:intergenic 30.0%
GCATGTAGTAATTTGAAAAG+GGG - chr8_3:51261192-51261211 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_3:51261480-51261499 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8_3:51261481-51261500 Msa1293780:intron 30.0%
! TGTGCAAAGTATTAATTGGA+GGG + chr8_3:51261615-51261634 Msa1293780:intron 30.0%
!! AAGCGACACTCATTTTAAAA+CGG + chr8_3:51261715-51261734 Msa1293780:intron 30.0%
!! GGGAGTACTTGATAAATATT+TGG + chr8_3:51261739-51261758 Msa1293780:intron 30.0%
! TGTGACCAAACCAAAATTTT+TGG + chr8_3:51261913-51261932 Msa1293780:intron 30.0%
TGTTCTACTTAAACTTGGTA+GGG - chr8_3:51261962-51261981 None:intergenic 30.0%
TTGTTCTACTTAAACTTGGT+AGG - chr8_3:51261963-51261982 None:intergenic 30.0%
!! TCTGATTTTGTTGGTAAAAC+AGG + chr8_3:51262008-51262027 Msa1293780:intron 30.0%
!! CTGATTTTGTTGGTAAAACA+GGG + chr8_3:51262009-51262028 Msa1293780:intron 30.0%
TTCTACTAGAATTTGTGAAG+TGG + chr8_3:51262119-51262138 Msa1293780:intron 30.0%
TAATAGTTTATCAGCCAACA+TGG - chr8_3:51262163-51262182 None:intergenic 30.0%
AAAAAACTGCATAAAGGACA+TGG - chr8_3:51262973-51262992 None:intergenic 30.0%
CATAGCAAAAAACTGCATAA+AGG - chr8_3:51262979-51262998 None:intergenic 30.0%
! ATTTTTGCACTTCATGACAA+CGG + chr8_3:51263025-51263044 Msa1293780:CDS 30.0%
!! TTAATTTCTTTGTTGGTAGC+TGG + chr8_3:51263295-51263314 Msa1293780:CDS 30.0%
!! AATGCGAGAAACACTTTTTA+TGG + chr8_3:51263345-51263364 Msa1293780:CDS 30.0%
!! GAAACACTTTTTATGGAACA+TGG + chr8_3:51263352-51263371 Msa1293780:CDS 30.0%
CTTATTAGGAGCAAAATCAA+TGG - chr8_3:51263513-51263532 None:intergenic 30.0%
CGTAGACAGATATTTATAAG+TGG + chr8_3:51264018-51264037 Msa1293780:intron 30.0%
AGACAGATATTTATAAGTGG+TGG + chr8_3:51264021-51264040 Msa1293780:intron 30.0%
! AGATATTTATAAGTGGTGGA+AGG + chr8_3:51264025-51264044 Msa1293780:CDS 30.0%
! TATTATTCTGGGGAAAATTC+GGG + chr8_3:51264099-51264118 Msa1293780:CDS 30.0%
! TTTCTTTGGAAGAGAACTAT+TGG - chr8_3:51264181-51264200 None:intergenic 30.0%
!! TTTCTTTTTAGCAATGATCG+AGG + chr8_3:51264252-51264271 Msa1293780:intron 30.0%
! AATGGATGGATTTACACTTA+AGG - chr8_3:51264397-51264416 None:intergenic 30.0%
! ACATACAATGGATTCTTGAA+TGG - chr8_3:51264833-51264852 None:intergenic 30.0%
ATTCAAGAATCCATTGTATG+TGG + chr8_3:51264832-51264851 Msa1293780:CDS 30.0%
!!! GATTTTGGGATGGAAATAAT+TGG - chr8_3:51264925-51264944 None:intergenic 30.0%
!!! GTGTACTTCTAAAGTGATTT+TGG - chr8_3:51264940-51264959 None:intergenic 30.0%
! TTCAAAAGTATATACCTCCT+TGG + chr8_3:51264986-51265005 Msa1293780:intron 30.0%
GTGACTGTTAACATCAAATA+TGG - chr8_3:51265139-51265158 None:intergenic 30.0%
AACAAACTCACTATGTACTT+TGG - chr8_3:51265318-51265337 None:intergenic 30.0%
CCATATAGGAAGAAAACATC+AGG - chr8_3:51256749-51256768 None:intergenic 35.0%
! CCTGATGTTTTCTTCCTATA+TGG + chr8_3:51256746-51256765 Msa1293780:CDS 35.0%
CTTCCTATATGGATATATGG+TGG + chr8_3:51256757-51256776 Msa1293780:CDS 35.0%
GTTCCACCATATATCCATAT+AGG - chr8_3:51256763-51256782 None:intergenic 35.0%
ATGAAGAGGCTAATATGTCA+AGG + chr8_3:51256822-51256841 Msa1293780:CDS 35.0%
! GATTGGTGATTAGGTAACAT+CGG + chr8_3:51257191-51257210 Msa1293780:intron 35.0%
CTGAATGGTAAATGTAGAAC+AGG - chr8_3:51257236-51257255 None:intergenic 35.0%
ACTAAACTTAGCATAGCATG+TGG - chr8_3:51257438-51257457 None:intergenic 35.0%
AAGTTTAGTTGCAATACACG+TGG + chr8_3:51257449-51257468 Msa1293780:intron 35.0%
!! ATTGGATTGGATAACGGATT+TGG + chr8_3:51257892-51257911 Msa1293780:intron 35.0%
GAAGTGATTTACACCAAAAG+AGG + chr8_3:51258009-51258028 Msa1293780:intron 35.0%
!! AAAAGAGTACACACCTCTTT+TGG - chr8_3:51258025-51258044 None:intergenic 35.0%
!! AAAGTGCTTTTGAGAGAGAA+AGG - chr8_3:51258271-51258290 None:intergenic 35.0%
!!! TGGCTCAAACACTTTTTTGA+TGG + chr8_3:51258336-51258355 Msa1293780:intron 35.0%
! AATTTGCATGTCAGGCTTTT+TGG + chr8_3:51258365-51258384 Msa1293780:intron 35.0%
GTTGTTTATGATTCTTCCTG+TGG + chr8_3:51258397-51258416 Msa1293780:CDS 35.0%
TATTGGGCCAAAAATTATCC+AGG + chr8_3:51258432-51258451 Msa1293780:CDS 35.0%
AATAAGGCGATCCAAACATA+CGG - chr8_3:51258781-51258800 None:intergenic 35.0%
TTTCCCCAATTTCAAAACAC+GGG + chr8_3:51259106-51259125 Msa1293780:intron 35.0%
!!! ATACCCGTGTTTTGAAATTG+GGG - chr8_3:51259112-51259131 None:intergenic 35.0%
!!! CATACCCGTGTTTTGAAATT+GGG - chr8_3:51259113-51259132 None:intergenic 35.0%
CAATTTCAAAACACGGGTAT+GGG + chr8_3:51259112-51259131 Msa1293780:intron 35.0%
!! TAATTTTCTGCATTTGGGAC+GGG - chr8_3:51259183-51259202 None:intergenic 35.0%
! GTAATTTTCTGCATTTGGGA+CGG - chr8_3:51259184-51259203 None:intergenic 35.0%
GCATTACAACATTTCTCTAG+GGG + chr8_3:51259329-51259348 Msa1293780:intron 35.0%
CGAGTAAGTATATGAGAATC+GGG + chr8_3:51259487-51259506 Msa1293780:intron 35.0%
AAGTATATGAGAATCGGGTA+TGG + chr8_3:51259492-51259511 Msa1293780:intron 35.0%
AGTATATGAGAATCGGGTAT+GGG + chr8_3:51259493-51259512 Msa1293780:intron 35.0%
CATTAATCATGATAAGCGCT+AGG - chr8_3:51259563-51259582 None:intergenic 35.0%
! GGGAGTGATACATTTTGTAT+GGG - chr8_3:51259627-51259646 None:intergenic 35.0%
! TGGGAGTGATACATTTTGTA+TGG - chr8_3:51259628-51259647 None:intergenic 35.0%
AACGTGAGTTAACTCATGTT+GGG - chr8_3:51259671-51259690 None:intergenic 35.0%
AAACGTGAGTTAACTCATGT+TGG - chr8_3:51259672-51259691 None:intergenic 35.0%
AACGTGAGTTAACTCATGTT+GGG - chr8_3:51259671-51259690 None:intergenic 35.0%
AACTAAGTGCAAAGCTGTAT+AGG + chr8_3:51259802-51259821 Msa1293780:intron 35.0%
AAGCTGCTCTCTGATAAAAA+AGG - chr8_3:51260043-51260062 None:intergenic 35.0%
!!! TGTGGGGGGTATTTAATTTT+TGG + chr8_3:51260073-51260092 Msa1293780:intron 35.0%
!!! GTGGGGGGTATTTAATTTTT+GGG + chr8_3:51260074-51260093 Msa1293780:intron 35.0%
TTGAACTATAATGCAGTGGT+TGG - chr8_3:51260331-51260350 None:intergenic 35.0%
CACTGCATTATAGTTCAACA+GGG + chr8_3:51260333-51260352 Msa1293780:intron 35.0%
ACTGCATTATAGTTCAACAG+GGG + chr8_3:51260334-51260353 Msa1293780:intron 35.0%
TTGCATGTCTCCCAAAAAAT+GGG - chr8_3:51260360-51260379 None:intergenic 35.0%
AGTGTAAGTTAACTCACGTT+AGG + chr8_3:51260527-51260546 Msa1293780:intron 35.0%
ATGTATGGAAAACACCAACA+CGG - chr8_3:51260741-51260760 None:intergenic 35.0%
GGCGAGAAGAAAAATATGTA+TGG - chr8_3:51260756-51260775 None:intergenic 35.0%
ATTATAAGCTCACACACAAG+TGG - chr8_3:51260967-51260986 None:intergenic 35.0%
ACTTGTGTGTGAGCTTATAA+TGG + chr8_3:51260966-51260985 Msa1293780:intron 35.0%
GTAATGAGTGCCTACATTAA+GGG + chr8_3:51261382-51261401 Msa1293780:intron 35.0%
! GGAGTGTGCAAAGTATTAAT+TGG + chr8_3:51261611-51261630 Msa1293780:intron 35.0%
! GTGTGCAAAGTATTAATTGG+AGG + chr8_3:51261614-51261633 Msa1293780:intron 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr8_3:51261719-51261738 Msa1293780:intron 35.0%
GGTAATTTCTATACCTACCA+AGG + chr8_3:51261760-51261779 Msa1293780:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr8_3:51261809-51261828 None:intergenic 35.0%
AGAAAAAATGGAGAAGAGAG+AGG + chr8_3:51261861-51261880 Msa1293780:intron 35.0%
!!! CTGGACCAAAAATTTTGGTT+TGG - chr8_3:51261921-51261940 None:intergenic 35.0%
!!! CAAACCAAAATTTTTGGTCC+AGG + chr8_3:51261919-51261938 Msa1293780:intron 35.0%
GAGGATTCAAATGGTTGAAA+TGG - chr8_3:51262075-51262094 None:intergenic 35.0%
AAATGGTATAATCCTTGTGG+AGG - chr8_3:51262094-51262113 None:intergenic 35.0%
TTATTTGACGGAATCAAGAG+AGG + chr8_3:51262451-51262470 Msa1293780:intron 35.0%
! GAGGTAATGGTGTGTAATTA+AGG + chr8_3:51262470-51262489 Msa1293780:intron 35.0%
! AGAACTCGAGCTTTAACAAA+TGG - chr8_3:51262882-51262901 None:intergenic 35.0%
GAAGTGCAAAAATGCCAAAT+GGG - chr8_3:51263018-51263037 None:intergenic 35.0%
TGAAGTGCAAAAATGCCAAA+TGG - chr8_3:51263019-51263038 None:intergenic 35.0%
! TTTCTTGGCATTTTATGGAC+AGG + chr8_3:51263204-51263223 Msa1293780:intron 35.0%
AGACAAATATGGACATGGTT+AGG + chr8_3:51263247-51263266 Msa1293780:CDS 35.0%
GATAGTTGCATTATAGTACC+TGG + chr8_3:51263319-51263338 Msa1293780:CDS 35.0%
! TTTTATGGAACATGGTTGTG+AGG + chr8_3:51263360-51263379 Msa1293780:CDS 35.0%
! AGGATTTGTTCGAATAGCAA+TGG + chr8_3:51263577-51263596 Msa1293780:intron 35.0%
TCAAAAATCCTTCCTGTCAA+TGG - chr8_3:51264490-51264509 None:intergenic 35.0%
! CAGGAAGGATTTTTGACATA+AGG + chr8_3:51264494-51264513 Msa1293780:intron 35.0%
! GGATTTTTGACATAAGGAGT+CGG + chr8_3:51264500-51264519 Msa1293780:intron 35.0%
!! ATGTTCTGAATACCACCTTT+TGG + chr8_3:51264537-51264556 Msa1293780:intron 35.0%
TAATTGCTCTTGGTCTAATG+TGG - chr8_3:51264586-51264605 None:intergenic 35.0%
TCTCATTGTCTAATTGCTCT+TGG - chr8_3:51264596-51264615 None:intergenic 35.0%
! ACCACATAACCTTTAGGTTT+AGG + chr8_3:51264640-51264659 Msa1293780:intron 35.0%
! CCACATAACCTTTAGGTTTA+GGG + chr8_3:51264641-51264660 Msa1293780:intron 35.0%
! AATGGATTCTTGAATGGTAC+AGG - chr8_3:51264827-51264846 None:intergenic 35.0%
!!! CTTCTAAAGTGATTTTGGGA+TGG - chr8_3:51264935-51264954 None:intergenic 35.0%
TTTGTTAATAGGGGTTGTCA+TGG + chr8_3:51265234-51265253 Msa1293780:intron 35.0%
TACTCTTTACCGTACGTGAT+TGG + chr8_3:51257174-51257193 Msa1293780:intron 40.0%
ACCTAATCACCAATCACGTA+CGG - chr8_3:51257186-51257205 None:intergenic 40.0%
AAATGTAGAACAGGGAGGAA+AGG - chr8_3:51257227-51257246 None:intergenic 40.0%
ATGGTAAATGTAGAACAGGG+AGG - chr8_3:51257232-51257251 None:intergenic 40.0%
!! TGTGTCTAGTACTGACTGAT+CGG - chr8_3:51257301-51257320 None:intergenic 40.0%
TTTAGTTGCAATACACGTGG+TGG + chr8_3:51257452-51257471 Msa1293780:intron 40.0%
ATTCCTCGCGATATATAGCA+CGG + chr8_3:51257637-51257656 Msa1293780:intron 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr8_3:51257740-51257759 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr8_3:51257748-51257767 Msa1293780:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr8_3:51257751-51257770 Msa1293780:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr8_3:51257774-51257793 Msa1293780:intron 40.0%
GTACTGTGACAAAGCAAACA+TGG + chr8_3:51257977-51257996 Msa1293780:intron 40.0%
!! AACATGGAAAAAGTGTTGCG+AGG + chr8_3:51258134-51258153 Msa1293780:CDS 40.0%
!! AAAAGTGTTGCGAGGAAATG+AGG + chr8_3:51258142-51258161 Msa1293780:CDS 40.0%
! TTGCGAGGAAATGAGGTATT+TGG + chr8_3:51258149-51258168 Msa1293780:CDS 40.0%
GGTGTTTCAATTTGCATGTC+AGG + chr8_3:51258357-51258376 Msa1293780:intron 40.0%
TGTGAGACTGTTTATGAGGA+CGG + chr8_3:51258826-51258845 Msa1293780:intron 40.0%
GTATAAGCGCTTATTAGGCA+TGG + chr8_3:51258991-51259010 Msa1293780:intron 40.0%
AAAACCCGTCAAATTGGGTT+TGG - chr8_3:51259051-51259070 None:intergenic 40.0%
ATACCCAAACCCAGTCAAAA+CGG - chr8_3:51259076-51259095 None:intergenic 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG + chr8_3:51259076-51259095 Msa1293780:intron 40.0%
!!! CCATACCCGTGTTTTGAAAT+TGG - chr8_3:51259114-51259133 None:intergenic 40.0%
CCAATTTCAAAACACGGGTA+TGG + chr8_3:51259111-51259130 Msa1293780:intron 40.0%
AAACTTATTCAATGCGGGGA+CGG + chr8_3:51259383-51259402 Msa1293780:intron 40.0%
GTTCAATTTCTCATCCCCAT+TGG + chr8_3:51259449-51259468 Msa1293780:intron 40.0%
TTTCTCATCCCCATTGGATA+TGG + chr8_3:51259455-51259474 Msa1293780:intron 40.0%
TTCTCATCCCCATTGGATAT+GGG + chr8_3:51259456-51259475 Msa1293780:intron 40.0%
TTACCCTACCCATATCCAAT+GGG - chr8_3:51259467-51259486 None:intergenic 40.0%
GTATATGAGAATCGGGTATG+GGG + chr8_3:51259494-51259513 Msa1293780:intron 40.0%
!!! AACTCATGTTGGGGGTATTT+TGG - chr8_3:51259661-51259680 None:intergenic 40.0%
ACGTGAGTTAACTCATGTTG+GGG - chr8_3:51259670-51259689 None:intergenic 40.0%
AGTTAACTCATGTTGGGGTT+CGG - chr8_3:51259755-51259774 None:intergenic 40.0%
ACGTGAGTTAACTCATGTTG+GGG - chr8_3:51259670-51259689 None:intergenic 40.0%
CAACGTGAGTTAACTCATGT+TGG - chr8_3:51259762-51259781 None:intergenic 40.0%
CAACATGAGTTAACTCACGT+TGG + chr8_3:51259670-51259689 Msa1293780:intron 40.0%
TTGCTTCCTTAACCAATGTC+TGG - chr8_3:51260117-51260136 None:intergenic 40.0%
AAAATGTTAACGAGTGCCTC+CGG - chr8_3:51260245-51260264 None:intergenic 40.0%
CCTGTTGAACTATAATGCAG+TGG - chr8_3:51260335-51260354 None:intergenic 40.0%
CCACTGCATTATAGTTCAAC+AGG + chr8_3:51260332-51260351 Msa1293780:intron 40.0%
CTTGCATGTCTCCCAAAAAA+TGG - chr8_3:51260361-51260380 None:intergenic 40.0%
!! TTTTTGGGAGACATGCAAGA+TGG + chr8_3:51260362-51260381 Msa1293780:intron 40.0%
CTGACCATTTAACTCACGTT+GGG - chr8_3:51260418-51260437 None:intergenic 40.0%
CAACGTGAGTTAAATGGTCA+GGG + chr8_3:51260417-51260436 Msa1293780:intron 40.0%
AACGCGAGTTAACTCATGTT+GGG - chr8_3:51260467-51260486 None:intergenic 40.0%
GAAAACACCAACACGGTATT+AGG - chr8_3:51260734-51260753 None:intergenic 40.0%
TCCATAAGTCCTAACTCAAC+TGG + chr8_3:51260890-51260909 Msa1293780:intron 40.0%
GGCAAAATGCCGAAATTGTT+AGG + chr8_3:51260911-51260930 Msa1293780:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG + chr8_3:51260915-51260934 Msa1293780:intron 40.0%
TGGGTGCTTAGATATAGAGA+CGG - chr8_3:51261139-51261158 None:intergenic 40.0%
GGTAATGAGTGCCTACATTA+AGG + chr8_3:51261381-51261400 Msa1293780:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_3:51261476-51261495 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr8_3:51261718-51261737 Msa1293780:intron 40.0%
TTCACACAAGTGTTTCTCCT+TGG - chr8_3:51261780-51261799 None:intergenic 40.0%
! TGAACCAGGACCAAGAATTT+TGG + chr8_3:51261796-51261815 Msa1293780:intron 40.0%
CAAACCAAAATTCTTGGTCC+TGG - chr8_3:51261803-51261822 None:intergenic 40.0%
!!! CAGGACCAAGAATTTTGGTT+TGG + chr8_3:51261801-51261820 Msa1293780:intron 40.0%
! TGGACCTGGACCAAAAATTT+TGG - chr8_3:51261926-51261945 None:intergenic 40.0%
AACCATTTGAATCCTCCACA+AGG + chr8_3:51262079-51262098 Msa1293780:intron 40.0%
ATCCTTGTGGAGGATTCAAA+TGG - chr8_3:51262084-51262103 None:intergenic 40.0%
AGTTGCATTATAGTACCTGG+TGG + chr8_3:51263322-51263341 Msa1293780:CDS 40.0%
TGTTCGAATAGCAATGGAGA+TGG + chr8_3:51263583-51263602 Msa1293780:intron 40.0%
GTTCGAATAGCAATGGAGAT+GGG + chr8_3:51263584-51263603 Msa1293780:intron 40.0%
AAAGCAGAAAACCGGAACAA+GGG - chr8_3:51263615-51263634 None:intergenic 40.0%
!! GAGTGAGAAAGTGTTTCATG+TGG - chr8_3:51263926-51263945 None:intergenic 40.0%
ACATATCGACCCAAACTCTT+AGG + chr8_3:51264321-51264340 Msa1293780:intron 40.0%
CATATCGACCCAAACTCTTA+GGG + chr8_3:51264322-51264341 Msa1293780:intron 40.0%
ATATCGACCCAAACTCTTAG+GGG + chr8_3:51264323-51264342 Msa1293780:intron 40.0%
TTGACATCCCCTAAGAGTTT+GGG - chr8_3:51264333-51264352 None:intergenic 40.0%
ATTGACATCCCCTAAGAGTT+TGG - chr8_3:51264334-51264353 None:intergenic 40.0%
AGCATGTCGAGATTAATGGA+TGG - chr8_3:51264411-51264430 None:intergenic 40.0%
AAAATCCTTCCTGTCAATGG+TGG - chr8_3:51264487-51264506 None:intergenic 40.0%
! AATACCACCTTTTGGTCATG+AGG + chr8_3:51264545-51264564 Msa1293780:intron 40.0%
ACGCATACCACATAACCTTT+AGG + chr8_3:51264634-51264653 Msa1293780:intron 40.0%
CCCTAAACCTAAAGGTTATG+TGG - chr8_3:51264644-51264663 None:intergenic 40.0%
GAGATGATCCCTAAACCTAA+AGG - chr8_3:51264652-51264671 None:intergenic 40.0%
TGGTACAGGAGATCTATAAG+AGG - chr8_3:51264813-51264832 None:intergenic 40.0%
CAAGAATCCATTGTATGTGG+TGG + chr8_3:51264835-51264854 Msa1293780:CDS 40.0%
AATCCATTGTATGTGGTGGT+GGG + chr8_3:51264839-51264858 Msa1293780:CDS 40.0%
GGAATCTTCTCAACCTGAAT+TGG - chr8_3:51264869-51264888 None:intergenic 40.0%
TAGTTGGTTGTAGTGCCTTT+AGG - chr8_3:51265183-51265202 None:intergenic 40.0%
! GTACGGTAAAGAGTACGTTG+AGG - chr8_3:51257169-51257188 None:intergenic 45.0%
! ACCGTACGTGATTGGTGATT+AGG + chr8_3:51257182-51257201 Msa1293780:intron 45.0%
AGAACAGGGAGGAAAGGATA+AGG - chr8_3:51257221-51257240 None:intergenic 45.0%
GTCATAAGCTGAGAGCTGAA+TGG - chr8_3:51257251-51257270 None:intergenic 45.0%
GCTTGCAGTTGCAGATCTTT+AGG + chr8_3:51257404-51257423 Msa1293780:intron 45.0%
TGCAGTTGCAGATCTTTAGG+TGG + chr8_3:51257407-51257426 Msa1293780:intron 45.0%
!! AAAGGTGTTGGCTGATCAGT+AGG - chr8_3:51257525-51257544 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr8_3:51257768-51257787 Msa1293780:intron 45.0%
TGTTCACACCTCTAGACGAT+TGG - chr8_3:51257918-51257937 None:intergenic 45.0%
TTTCCCCATCACACTTCACT+TGG + chr8_3:51258606-51258625 Msa1293780:CDS 45.0%
TCCTCCAAGTGAAGTGTGAT+GGG - chr8_3:51258613-51258632 None:intergenic 45.0%
ATCCTCCAAGTGAAGTGTGA+TGG - chr8_3:51258614-51258633 None:intergenic 45.0%
GATCCAAACATACGGCTAAG+GGG - chr8_3:51258773-51258792 None:intergenic 45.0%
CGATCCAAACATACGGCTAA+GGG - chr8_3:51258774-51258793 None:intergenic 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG - chr8_3:51259045-51259064 None:intergenic 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG - chr8_3:51259046-51259065 None:intergenic 45.0%
CCGAACCAAACCCAATTTGA+CGG + chr8_3:51259043-51259062 Msa1293780:intron 45.0%
CGAACCAAACCCAATTTGAC+GGG + chr8_3:51259044-51259063 Msa1293780:intron 45.0%
TACCCAAACCCAGTCAAAAC+GGG - chr8_3:51259075-51259094 None:intergenic 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG + chr8_3:51259075-51259094 Msa1293780:intron 45.0%
TTCAAAACACGGGTATGGGA+CGG + chr8_3:51259116-51259135 Msa1293780:intron 45.0%
AACTTATTCAATGCGGGGAC+GGG + chr8_3:51259384-51259403 Msa1293780:intron 45.0%
ATCCCCATTGGATATGGGTA+GGG + chr8_3:51259461-51259480 Msa1293780:intron 45.0%
TACCCTACCCATATCCAATG+GGG - chr8_3:51259466-51259485 None:intergenic 45.0%
GTTACCCTACCCATATCCAA+TGG - chr8_3:51259468-51259487 None:intergenic 45.0%
ATCATGATAAGCGCTAGGCA+TGG - chr8_3:51259558-51259577 None:intergenic 45.0%
CGTGAGTTAACTCATGTTGG+GGG - chr8_3:51259669-51259688 None:intergenic 45.0%
GATTTAATTCACGCTCACGC+TGG + chr8_3:51259706-51259725 Msa1293780:intron 45.0%
TTAACCAGTGCTCCAGACAT+TGG + chr8_3:51260102-51260121 Msa1293780:intron 45.0%
! TTAACCAATGTCTGGAGCAC+TGG - chr8_3:51260109-51260128 None:intergenic 45.0%
! AGTGCTCCAGACATTGGTTA+AGG + chr8_3:51260108-51260127 Msa1293780:intron 45.0%
AGTTTCCTTAACCAGTGTCC+CGG + chr8_3:51260223-51260242 Msa1293780:intron 45.0%
AAATGTTAACGAGTGCCTCC+GGG - chr8_3:51260244-51260263 None:intergenic 45.0%
!!! TTCAACAGGGGCCCATTTTT+TGG + chr8_3:51260346-51260365 Msa1293780:intron 45.0%
!!! TCAACAGGGGCCCATTTTTT+GGG + chr8_3:51260347-51260366 Msa1293780:intron 45.0%
ATGGTCAGGGATCAATGAAG+TGG + chr8_3:51260381-51260400 Msa1293780:intron 45.0%
TGGTCAGGGATCAATGAAGT+GGG + chr8_3:51260382-51260401 Msa1293780:intron 45.0%
GCAACCCAACGTGAGTTAAA+TGG + chr8_3:51260411-51260430 Msa1293780:intron 45.0%
CCTGACCATTTAACTCACGT+TGG - chr8_3:51260419-51260438 None:intergenic 45.0%
CCAACGTGAGTTAAATGGTC+AGG + chr8_3:51260416-51260435 Msa1293780:intron 45.0%
ATGGTCAGGGATCAATGAAG+TGG + chr8_3:51260381-51260400 Msa1293780:intron 45.0%
TGGTCAGGGATCAATGAAGT+GGG + chr8_3:51260382-51260401 Msa1293780:intron 45.0%
CAACGCGAGTTAACTCATGT+TGG - chr8_3:51260468-51260487 None:intergenic 45.0%
CAACATGAGTTAACTCGCGT+TGG + chr8_3:51260466-51260485 Msa1293780:intron 45.0%
CAACTCTCCTAATACCGTGT+TGG + chr8_3:51260724-51260743 Msa1293780:intron 45.0%
GCCAGTTGAGTTAGGACTTA+TGG - chr8_3:51260894-51260913 None:intergenic 45.0%
! GGCATTTTGCCAGTTGAGTT+AGG - chr8_3:51260902-51260921 None:intergenic 45.0%
GACATCCGGCCTAACAATTT+CGG - chr8_3:51260923-51260942 None:intergenic 45.0%
ATAAGCTCACACACAAGTGG+AGG - chr8_3:51260964-51260983 None:intergenic 45.0%
TGCTTAGATATAGAGACGGC+GGG - chr8_3:51261135-51261154 None:intergenic 45.0%
GTGCTTAGATATAGAGACGG+CGG - chr8_3:51261136-51261155 None:intergenic 45.0%
TGAGTGCCTACATTAAGGGA+TGG + chr8_3:51261386-51261405 Msa1293780:intron 45.0%
TGCCTACATTAAGGGATGGA+GGG + chr8_3:51261390-51261409 Msa1293780:intron 45.0%
! CGGAGGGAGTACATAATTGT+TGG - chr8_3:51261460-51261479 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_3:51261477-51261496 None:intergenic 45.0%
CACAAGTGTTTCTCCTTGGT+AGG - chr8_3:51261776-51261795 None:intergenic 45.0%
GAGAAACACTTGTGTGAACC+AGG + chr8_3:51261782-51261801 Msa1293780:intron 45.0%
GAGAAAATCTTGTGTGGACC+TGG - chr8_3:51261940-51261959 None:intergenic 45.0%
GGTAGGGAGAAAATCTTGTG+TGG - chr8_3:51261946-51261965 None:intergenic 45.0%
! GGTAAAACAGGGCTAGTACA+AGG + chr8_3:51262020-51262039 Msa1293780:intron 45.0%
! AAACAGGGCTAGTACAAGGA+AGG + chr8_3:51262024-51262043 Msa1293780:intron 45.0%
CTAGAATTTGTGAAGTGGCG+TGG + chr8_3:51262124-51262143 Msa1293780:intron 45.0%
GACGGAATCAAGAGAGGTAA+TGG + chr8_3:51262457-51262476 Msa1293780:intron 45.0%
AGTCGCGTTGAGCTTATCTT+TGG - chr8_3:51262832-51262851 None:intergenic 45.0%
CCAAATGGGAAGACTGAATG+TGG - chr8_3:51263004-51263023 None:intergenic 45.0%
CCACATTCAGTCTTCCCATT+TGG + chr8_3:51263001-51263020 Msa1293780:CDS 45.0%
AAGCAGAAAACCGGAACAAG+GGG - chr8_3:51263614-51263633 None:intergenic 45.0%
CAAAGCAGAAAACCGGAACA+AGG - chr8_3:51263616-51263635 None:intergenic 45.0%
! CTTGTTCCGGTTTTCTGCTT+TGG + chr8_3:51263614-51263633 Msa1293780:intron 45.0%
ACCTGACCAAAGCAGAAAAC+CGG - chr8_3:51263623-51263642 None:intergenic 45.0%
! TATAAGTGGTGGAAGGCTTC+TGG + chr8_3:51264032-51264051 Msa1293780:CDS 45.0%
! GGGAAGCATGTCGAGATTAA+TGG - chr8_3:51264415-51264434 None:intergenic 45.0%
TGAAAAAAGCTTCTCCCCGA+GGG - chr8_3:51264436-51264455 None:intergenic 45.0%
ATGAAAAAAGCTTCTCCCCG+AGG - chr8_3:51264437-51264456 None:intergenic 45.0%
ACGGCTTGTGAAAATGGATG+TGG - chr8_3:51264460-51264479 None:intergenic 45.0%
CTATCCTCATGACCAAAAGG+TGG - chr8_3:51264552-51264571 None:intergenic 45.0%
TGGTCTAATGTGGCGATCTT+CGG - chr8_3:51264576-51264595 None:intergenic 45.0%
GAATCCATTGTATGTGGTGG+TGG + chr8_3:51264838-51264857 Msa1293780:CDS 45.0%
TTACCCACCACCACATACAA+TGG - chr8_3:51264845-51264864 None:intergenic 45.0%
GAACGATACAAGACTCAAGC+TGG + chr8_3:51265359-51265378 Msa1293780:CDS 45.0%
!! AAATAAAAATATAAGTTAAA+CGG - chr8_3:51257485-51257504 None:intergenic 5.0%
!!! TTTTAATTTACAATTAAAAA+AGG - chr8_3:51258514-51258533 None:intergenic 5.0%
!! ATAAATGATTAATAAAAAAA+AGG - chr8_3:51262940-51262959 None:intergenic 5.0%
!! AAATATGAATATATATTATT+TGG + chr8_3:51263802-51263821 Msa1293780:intron 5.0%
!!! ATTTATATTTTTTTAAACTT+TGG + chr8_3:51263993-51264012 Msa1293780:intron 5.0%
!!! TTTATATTTTTTTAAACTTT+GGG + chr8_3:51263994-51264013 Msa1293780:intron 5.0%
!!! TATTTTTTATTTTTGTTAAT+AGG + chr8_3:51265223-51265242 Msa1293780:intron 5.0%
!!! ATTTTTTATTTTTGTTAATA+GGG + chr8_3:51265224-51265243 Msa1293780:intron 5.0%
! TACTGACTGATCGGTGCAGT+TGG - chr8_3:51257292-51257311 None:intergenic 50.0%
AGTTGCAATACACGTGGTGG+CGG + chr8_3:51257455-51257474 Msa1293780:intron 50.0%
ACGCTCGCGAATTTCACGAA+TGG - chr8_3:51257616-51257635 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr8_3:51257756-51257775 Msa1293780:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr8_3:51257761-51257780 None:intergenic 50.0%
GGATTTGGCCAATCGTCTAG+AGG + chr8_3:51257907-51257926 Msa1293780:intron 50.0%
CCTCCAAGTGAAGTGTGATG+GGG - chr8_3:51258612-51258631 None:intergenic 50.0%
GCGATCCAAACATACGGCTA+AGG - chr8_3:51258775-51258794 None:intergenic 50.0%
!! AAATTGGGTTTGGTTCGGGC+GGG - chr8_3:51259041-51259060 None:intergenic 50.0%
!! CAAATTGGGTTTGGTTCGGG+CGG - chr8_3:51259042-51259061 None:intergenic 50.0%
CGGGGAAAACCCGTCAAATT+GGG - chr8_3:51259056-51259075 None:intergenic 50.0%
ACGGGGAAAACCCGTCAAAT+TGG - chr8_3:51259057-51259076 None:intergenic 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG + chr8_3:51259064-51259083 Msa1293780:intron 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG + chr8_3:51259069-51259088 Msa1293780:intron 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG + chr8_3:51259070-51259089 Msa1293780:intron 50.0%
ACCCAAACCCAGTCAAAACG+GGG - chr8_3:51259074-51259093 None:intergenic 50.0%
ACTGGGTTTGGGTATGGGTT+TGG + chr8_3:51259081-51259100 Msa1293780:intron 50.0%
CTGGGTTTGGGTATGGGTTT+GGG + chr8_3:51259082-51259101 Msa1293780:intron 50.0%
TCAAAACACGGGTATGGGAC+GGG + chr8_3:51259117-51259136 Msa1293780:intron 50.0%
!! GGGACGGGTAATGGGTATAT+AGG + chr8_3:51259132-51259151 Msa1293780:intron 50.0%
! TTTGGGACGGGTTTGGGTAT+GGG - chr8_3:51259171-51259190 None:intergenic 50.0%
! ATTTGGGACGGGTTTGGGTA+TGG - chr8_3:51259172-51259191 None:intergenic 50.0%
! TCTGCATTTGGGACGGGTTT+GGG - chr8_3:51259177-51259196 None:intergenic 50.0%
! TTCTGCATTTGGGACGGGTT+TGG - chr8_3:51259178-51259197 None:intergenic 50.0%
CATCCCCATTGGATATGGGT+AGG + chr8_3:51259460-51259479 Msa1293780:intron 50.0%
ATGAGAATCGGGTATGGGGA+TGG + chr8_3:51259498-51259517 Msa1293780:intron 50.0%
TGAGAATCGGGTATGGGGAT+GGG + chr8_3:51259499-51259518 Msa1293780:intron 50.0%
TAAGCGCTAGGCATGGCAAT+GGG - chr8_3:51259551-51259570 None:intergenic 50.0%
ATAAGCGCTAGGCATGGCAA+TGG - chr8_3:51259552-51259571 None:intergenic 50.0%
TCAGAGAGCAGCTTTGCACT+AGG + chr8_3:51260049-51260068 Msa1293780:intron 50.0%
AGCAGCTTTGCACTAGGATG+TGG + chr8_3:51260055-51260074 Msa1293780:intron 50.0%
GCAGCTTTGCACTAGGATGT+GGG + chr8_3:51260056-51260075 Msa1293780:intron 50.0%
CAGCTTTGCACTAGGATGTG+GGG + chr8_3:51260057-51260076 Msa1293780:intron 50.0%
AGCTTTGCACTAGGATGTGG+GGG + chr8_3:51260058-51260077 Msa1293780:intron 50.0%
GGAGACATGCAAGATGGTCA+GGG + chr8_3:51260368-51260387 Msa1293780:intron 50.0%
GGGGTTCGAATCATGACATC+CGG - chr8_3:51260937-51260956 None:intergenic 50.0%
!! ACACACAAGTGGAGGTACTG+GGG - chr8_3:51260956-51260975 None:intergenic 50.0%
!! CACACACAAGTGGAGGTACT+GGG - chr8_3:51260957-51260976 None:intergenic 50.0%
! TCACACACAAGTGGAGGTAC+TGG - chr8_3:51260958-51260977 None:intergenic 50.0%
GTGCCTACATTAAGGGATGG+AGG + chr8_3:51261389-51261408 Msa1293780:intron 50.0%
CTCCCTCCATCCCTTAATGT+AGG - chr8_3:51261395-51261414 None:intergenic 50.0%
! AGGGCTAGTACAAGGAAGGT+TGG + chr8_3:51262028-51262047 Msa1293780:intron 50.0%
GAATTTGTGAAGTGGCGTGG+AGG + chr8_3:51262127-51262146 Msa1293780:intron 50.0%
AGTGTTTCTCGCATTCCACC+AGG - chr8_3:51263340-51263359 None:intergenic 50.0%
AGCAGAAAACCGGAACAAGG+GGG - chr8_3:51263613-51263632 None:intergenic 50.0%
! TCCGGTTTTCTGCTTTGGTC+AGG + chr8_3:51263619-51263638 Msa1293780:intron 50.0%
GACACTTTCGGACACTGTTG+TGG + chr8_3:51263709-51263728 Msa1293780:intron 50.0%
AATCTCGACATGCTTCCCCT+CGG + chr8_3:51264417-51264436 Msa1293780:intron 50.0%
GAAAAAAGCTTCTCCCCGAG+GGG - chr8_3:51264435-51264454 None:intergenic 50.0%
GGTGAGACGGCTTGTGAAAA+TGG - chr8_3:51264466-51264485 None:intergenic 50.0%
! TCCTGTCAATGGTGGTGAGA+CGG - chr8_3:51264479-51264498 None:intergenic 50.0%
TCTCACCACCATTGACAGGA+AGG + chr8_3:51264479-51264498 Msa1293780:intron 50.0%
GGGCTATCCTCATGACCAAA+AGG - chr8_3:51264555-51264574 None:intergenic 50.0%
GGTCTAATGTGGCGATCTTC+GGG - chr8_3:51264575-51264594 None:intergenic 50.0%
!! GGTGGTGGGTAAACCAATTC+AGG + chr8_3:51264853-51264872 Msa1293780:CDS 50.0%
TCCAGAACCAACATCAGAGC+AGG + chr8_3:51264886-51264905 Msa1293780:CDS 50.0%
GTACATGCCTGCTCTGATGT+TGG - chr8_3:51264896-51264915 None:intergenic 50.0%
GAGCCGTGCTATATATCGCG+AGG - chr8_3:51257643-51257662 None:intergenic 55.0%
CCCCATCACACTTCACTTGG+AGG + chr8_3:51258609-51258628 Msa1293780:CDS 55.0%
CATACGGCTAAGGGGTCCAA+AGG - chr8_3:51258765-51258784 None:intergenic 55.0%
GGACCCCTTAGCCGTATGTT+TGG + chr8_3:51258767-51258786 Msa1293780:intron 55.0%
GGCAACAAAACCCATACCCG+CGG + chr8_3:51259012-51259031 Msa1293780:intron 55.0%
!! CGGGTTTTCCCCGTTTTGAC+TGG + chr8_3:51259063-51259082 Msa1293780:intron 55.0%
ACGGGTATGGGACGGGTAAT+GGG + chr8_3:51259124-51259143 Msa1293780:intron 55.0%
TTTGGGTATGGGTTCGGGGT+GGG - chr8_3:51259160-51259179 None:intergenic 55.0%
ACGGGTTTGGGTATGGGTTC+GGG - chr8_3:51259165-51259184 None:intergenic 55.0%
! GACGGGTTTGGGTATGGGTT+CGG - chr8_3:51259166-51259185 None:intergenic 55.0%
ATTCAATGCGGGGACGGGAA+TGG + chr8_3:51259389-51259408 Msa1293780:intron 55.0%
TTCAATGCGGGGACGGGAAT+GGG + chr8_3:51259390-51259409 Msa1293780:intron 55.0%
ATACTCGAATCCGTCGGGGA+CGG + chr8_3:51259419-51259438 Msa1293780:intron 55.0%
GAGAATCGGGTATGGGGATG+GGG + chr8_3:51259500-51259519 Msa1293780:intron 55.0%
AAGCGCTAGGCATGGCAATG+GGG - chr8_3:51259550-51259569 None:intergenic 55.0%
GCTTTGCACTAGGATGTGGG+GGG + chr8_3:51260059-51260078 Msa1293780:intron 55.0%
TTCCTTAACCAGTGTCCCGG+AGG + chr8_3:51260226-51260245 Msa1293780:intron 55.0%
GGGAGACATGCAAGATGGTC+AGG + chr8_3:51260367-51260386 Msa1293780:intron 55.0%
TTGTGAAGTGGCGTGGAGGA+TGG + chr8_3:51262131-51262150 Msa1293780:intron 55.0%
ATCTCGACATGCTTCCCCTC+GGG + chr8_3:51264418-51264437 Msa1293780:intron 55.0%
!! GCCTGCTCTGATGTTGGTTC+TGG - chr8_3:51264890-51264909 None:intergenic 55.0%
CAGCTGTACGACGACGGAGA+TGG - chr8_3:51257345-51257364 None:intergenic 60.0%
GGGACTCAGCTGTACGACGA+CGG - chr8_3:51257351-51257370 None:intergenic 60.0%
GTACAGCTGAGTCCCGACTG+TGG + chr8_3:51257356-51257375 Msa1293780:intron 60.0%
AGTCCCGACTGTGGCATGGT+GGG + chr8_3:51257365-51257384 Msa1293780:intron 60.0%
AACCCCCACCATGCCACAGT+CGG - chr8_3:51257372-51257391 None:intergenic 60.0%
CACGGGTATGGGACGGGTAA+TGG + chr8_3:51259123-51259142 Msa1293780:intron 60.0%
GTTTGGGTATGGGTTCGGGG+TGG - chr8_3:51259161-51259180 None:intergenic 60.0%
CGGGTTTGGGTATGGGTTCG+GGG - chr8_3:51259164-51259183 None:intergenic 60.0%
TCAATGCGGGGACGGGAATG+GGG + chr8_3:51259391-51259410 Msa1293780:intron 60.0%
GCGGGGATACTCGAATCCGT+CGG + chr8_3:51259413-51259432 Msa1293780:intron 60.0%
CGGGGATACTCGAATCCGTC+GGG + chr8_3:51259414-51259433 Msa1293780:intron 60.0%
GGGGATACTCGAATCCGTCG+GGG + chr8_3:51259415-51259434 Msa1293780:intron 60.0%
TACTCGAATCCGTCGGGGAC+GGG + chr8_3:51259420-51259439 Msa1293780:intron 60.0%
! TGCCTCCGGGACACTGGTTA+AGG - chr8_3:51260231-51260250 None:intergenic 60.0%
TGAAGTGGCGTGGAGGATGG+AGG + chr8_3:51262134-51262153 Msa1293780:intron 60.0%
GAAGTGGCGTGGAGGATGGA+GGG + chr8_3:51262135-51262154 Msa1293780:intron 60.0%
AAGTGGCGTGGAGGATGGAG+GGG + chr8_3:51262136-51262155 Msa1293780:intron 60.0%
GAGGATGGAGGGGACCATGT+TGG + chr8_3:51262146-51262165 Msa1293780:intron 60.0%
GATGGGTCACCCCCTTGTTC+CGG + chr8_3:51263601-51263620 Msa1293780:intron 60.0%
TCTCGACATGCTTCCCCTCG+GGG + chr8_3:51264419-51264438 Msa1293780:intron 60.0%
GCCGTCTCACCACCATTGAC+AGG + chr8_3:51264475-51264494 Msa1293780:intron 60.0%
GCTGAGTCCCGACTGTGGCA+TGG + chr8_3:51257361-51257380 Msa1293780:intron 65.0%
GAGTCCCGACTGTGGCATGG+TGG + chr8_3:51257364-51257383 Msa1293780:intron 65.0%
GTCCCGACTGTGGCATGGTG+GGG + chr8_3:51257366-51257385 Msa1293780:intron 65.0%
TCCCGACTGTGGCATGGTGG+GGG + chr8_3:51257367-51257386 Msa1293780:intron 65.0%
ACCCCCACCATGCCACAGTC+GGG - chr8_3:51257371-51257390 None:intergenic 65.0%
!! TTGGTTCGGGCGGGTAACCG+CGG - chr8_3:51259032-51259051 None:intergenic 65.0%
ACTCGAATCCGTCGGGGACG+GGG + chr8_3:51259421-51259440 Msa1293780:intron 65.0%
AATCCGTCGGGGACGGGGAT+GGG + chr8_3:51259426-51259445 Msa1293780:intron 65.0%
CTAGGCATGGCAATGGGGCG+GGG - chr8_3:51259545-51259564 None:intergenic 65.0%
GCTAGGCATGGCAATGGGGC+GGG - chr8_3:51259546-51259565 None:intergenic 65.0%
CGCTAGGCATGGCAATGGGG+CGG - chr8_3:51259547-51259566 None:intergenic 65.0%
AACGAGTGCCTCCGGGACAC+TGG - chr8_3:51260237-51260256 None:intergenic 65.0%
GGGCGGGTAACCGCGGGTAT+GGG - chr8_3:51259025-51259044 None:intergenic 70.0%
! TGGTTCGGGCGGGTAACCGC+GGG - chr8_3:51259031-51259050 None:intergenic 70.0%
ATGCGGGGACGGGAATGGGG+CGG + chr8_3:51259394-51259413 Msa1293780:intron 70.0%
GAATCCGTCGGGGACGGGGA+TGG + chr8_3:51259425-51259444 Msa1293780:intron 70.0%
ATCCGTCGGGGACGGGGATG+GGG + chr8_3:51259427-51259446 Msa1293780:intron 70.0%
AACCCCATCCCCGTCCCCGA+CGG - chr8_3:51259432-51259451 None:intergenic 70.0%
CATGGCAATGGGGCGGGGTG+GGG - chr8_3:51259540-51259559 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG - chr8_3:51259541-51259560 None:intergenic 70.0%
CGGGCGGGTAACCGCGGGTA+TGG - chr8_3:51259026-51259045 None:intergenic 75.0%
TGCGGGGACGGGAATGGGGC+GGG + chr8_3:51259395-51259414 Msa1293780:intron 75.0%
CAATGGGGCGGGGTGGGGAC+GGG - chr8_3:51259535-51259554 None:intergenic 75.0%
GCAATGGGGCGGGGTGGGGA+CGG - chr8_3:51259536-51259555 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG - chr8_3:51259542-51259561 None:intergenic 75.0%
! GCGGGGACGGGAATGGGGCG+GGG + chr8_3:51259396-51259415 Msa1293780:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 51256722 51265412 51256722 ID=Msa1293780;Name=Msa1293780
chr8_3 mRNA 51256722 51265412 51256722 ID=Msa1293780-mRNA-1;Parent=Msa1293780;Name=Msa1293780-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.44|0.4|0.8|0.66|0.7|10|0|342
chr8_3 exon 51256722 51256843 51256722 ID=Msa1293780-mRNA-1:exon:14299;Parent=Msa1293780-mRNA-1
chr8_3 exon 51258112 51258291 51258112 ID=Msa1293780-mRNA-1:exon:14300;Parent=Msa1293780-mRNA-1
chr8_3 exon 51258379 51258453 51258379 ID=Msa1293780-mRNA-1:exon:14301;Parent=Msa1293780-mRNA-1
chr8_3 exon 51258579 51258664 51258579 ID=Msa1293780-mRNA-1:exon:14302;Parent=Msa1293780-mRNA-1
chr8_3 exon 51262987 51263093 51262987 ID=Msa1293780-mRNA-1:exon:14303;Parent=Msa1293780-mRNA-1
chr8_3 exon 51263226 51263381 51263226 ID=Msa1293780-mRNA-1:exon:14304;Parent=Msa1293780-mRNA-1
chr8_3 exon 51264023 51264120 51264023 ID=Msa1293780-mRNA-1:exon:14305;Parent=Msa1293780-mRNA-1
chr8_3 exon 51264820 51264911 51264820 ID=Msa1293780-mRNA-1:exon:14306;Parent=Msa1293780-mRNA-1
chr8_3 exon 51265245 51265255 51265245 ID=Msa1293780-mRNA-1:exon:14307;Parent=Msa1293780-mRNA-1
chr8_3 exon 51265311 51265412 51265311 ID=Msa1293780-mRNA-1:exon:14308;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51256722 51256843 51256722 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51258112 51258291 51258112 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51258379 51258453 51258379 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51258579 51258664 51258579 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51262987 51263093 51262987 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51263226 51263381 51263226 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51264023 51264120 51264023 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51264820 51264911 51264820 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51265245 51265255 51265245 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
chr8_3 CDS 51265311 51265412 51265311 ID=Msa1293780-mRNA-1:cds;Parent=Msa1293780-mRNA-1
Gene Sequence

>Msa1293780

ATGGCAAGAGTTAATGCGAATCAACCTGATGTTTTCTTCCTATATGGATATATGGTGGAACAAGTAAAACTTTTATTTAGAGAGCTGTCATCACTAAAATATGAAGAGGCTAATATGTCAAGAGAACATAACACAACAAAACATAACATGGAAAAAGTGTTGCGAGGAAATGAGGTATTTGGTGAATCATGCAATTGGTTCAAGTCTGTTGTAGCATTAACTTTGTGTTTTGGAGCAATTCATTTCAATCTTGCTTTGATACTCTTTGCTATCTTCTTCCTTTCTCTCTCAAAAGCACTTTTGCTTTTTGGTTTCCTCATGTTGTTTATGATTCTTCCTGTGGATAAGAACAGTTTATTGGGCCAAAAATTATCCAGATTCATATGCAAACATGTTTGCAGTTATTTCCCCATCACACTTCACTTGGAGGATGCAGAAGCTTTCCATCTTAATCAACCTTATGTTTTTTGCTATGAGCCACATTCAGTCTTCCCATTTGGCATTTTTGCACTTCATGACAACGGAGACTTCATGCCTATTCCAAATATAAGATTTCTTGTTAGCAGTGCAGCTTTCTACATACCATATTTAAGACAAATATGGACATGGTTAGGTTTTTCATCTGTAACGAAGAAAAATTTAATTTCTTTGTTGGTAGCTGGTGATAGTTGCATTATAGTACCTGGTGGAATGCGAGAAACACTTTTTATGGAACATGGTTGTGAGACAGATATTTATAAGTGGTGGAAGGCTTCTGGTAAGTTAATTCAAAATCTTGCAAGGTCTATGAAGATCTTTCCATTATTATTCTGGGGAAAATTCGGATCTCCTGTACCATTCAAGAATCCATTGTATGTGGTGGTGGGTAAACCAATTCAGGTTGAGAAGATTCCAGAACCAACATCAGAGCAGGCATGGGTTGTCATGGTTGCCAAAGTACATAGTGAGTTTGTTGAAGCACTTCAAGATCTTTTTGAACGATACAAGACTCAAGCTGGATGTACAAACCTCGAGTTGAAAATTGTTTGA

Protein sequence

>Msa1293780

MARVNANQPDVFFLYGYMVEQVKLLFRELSSLKYEEANMSREHNTTKHNMEKVLRGNEVFGESCNWFKSVVALTLCFGAIHFNLALILFAIFFLSLSKALLLFGFLMLFMILPVDKNSLLGQKLSRFICKHVCSYFPITLHLEDAEAFHLNQPYVFCYEPHSVFPFGIFALHDNGDFMPIPNIRFLVSSAAFYIPYLRQIWTWLGFSSVTKKNLISLLVAGDSCIIVPGGMRETLFMEHGCETDIYKWWKASGKLIQNLARSMKIFPLLFWGKFGSPVPFKNPLYVVVGKPIQVEKIPEPTSEQAWVVMVAKVHSEFVEALQDLFERYKTQAGCTNLELKIV*