Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973250 | XP_003618418.1 | 89.583 | 192 | 12 | 2 | 1 | 184 | 1 | 192 | 3.47e-96 | 287 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973250 | G7KJZ7 | 89.583 | 192 | 12 | 2 | 1 | 184 | 1 | 192 | 1.66e-96 | 287 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0973250 | 0.808501 | 3.003363e-50 | -8.615850e-47 |
| Msa0002930 | Msa0973250 | 0.803084 | 4.127269e-49 | -8.615850e-47 |
| Msa0016120 | Msa0973250 | 0.805208 | 1.491694e-49 | -8.615850e-47 |
| Msa0017510 | Msa0973250 | 0.850678 | 1.453396e-60 | -8.615850e-47 |
| Msa0029910 | Msa0973250 | 0.807360 | 5.249676e-50 | -8.615850e-47 |
| Msa0034270 | Msa0973250 | 0.806413 | 8.325907e-50 | -8.615850e-47 |
| Msa0036430 | Msa0973250 | 0.832922 | 7.169770e-56 | -8.615850e-47 |
| Msa0044020 | Msa0973250 | 0.805844 | 1.097041e-49 | -8.615850e-47 |
| Msa0050040 | Msa0973250 | 0.826289 | 2.943679e-54 | -8.615850e-47 |
| Msa0069330 | Msa0973250 | 0.805249 | 1.462065e-49 | -8.615850e-47 |
| Msa0072370 | Msa0973250 | 0.811990 | 5.308947e-51 | -8.615850e-47 |
| Msa0076250 | Msa0973250 | 0.820742 | 5.840230e-53 | -8.615850e-47 |
| Msa0084500 | Msa0973250 | 0.841358 | 4.987328e-58 | -8.615850e-47 |
| Msa0089630 | Msa0973250 | 0.805839 | 1.099823e-49 | -8.615850e-47 |
| Msa0094850 | Msa0973250 | 0.804401 | 2.198485e-49 | -8.615850e-47 |
| Msa0098440 | Msa0973250 | 0.807563 | 4.754858e-50 | -8.615850e-47 |
| Msa0102990 | Msa0973250 | 0.826891 | 2.114926e-54 | -8.615850e-47 |
| Msa0104550 | Msa0973250 | 0.801489 | 8.791750e-49 | -8.615850e-47 |
| Msa0110970 | Msa0973250 | 0.853431 | 2.400878e-61 | -8.615850e-47 |
| Msa0118570 | Msa0973250 | 0.808319 | 3.283291e-50 | -8.615850e-47 |
| Msa0620240 | Msa0973250 | 0.810966 | 8.859740e-51 | -8.615850e-47 |
| Msa0625890 | Msa0973250 | 0.810469 | 1.134883e-50 | -8.615850e-47 |
| Msa0631120 | Msa0973250 | 0.808440 | 3.094308e-50 | -8.615850e-47 |
| Msa0657970 | Msa0973250 | 0.803889 | 2.810489e-49 | -8.615850e-47 |
| Msa0662240 | Msa0973250 | 0.807256 | 5.525286e-50 | -8.615850e-47 |
| Msa0663590 | Msa0973250 | 0.803063 | 4.167998e-49 | -8.615850e-47 |
| Msa0663680 | Msa0973250 | 0.812074 | 5.090086e-51 | -8.615850e-47 |
| Msa0669840 | Msa0973250 | 0.836458 | 9.248788e-57 | -8.615850e-47 |
| Msa0683570 | Msa0973250 | 0.804855 | 1.767912e-49 | -8.615850e-47 |
| Msa0688500 | Msa0973250 | 0.811748 | 5.994856e-51 | -8.615850e-47 |
| Msa0707220 | Msa0973250 | 0.801309 | 9.567965e-49 | -8.615850e-47 |
| Msa0741900 | Msa0973250 | 0.841433 | 4.767571e-58 | -8.615850e-47 |
| Msa0742180 | Msa0973250 | 0.825599 | 4.294368e-54 | -8.615850e-47 |
| Msa0775700 | Msa0973250 | 0.824527 | 7.689800e-54 | -8.615850e-47 |
| Msa0822990 | Msa0973250 | 0.814294 | 1.657486e-51 | -8.615850e-47 |
| Msa0823400 | Msa0973250 | 0.816660 | 4.931448e-52 | -8.615850e-47 |
| Msa0824660 | Msa0973250 | 0.805861 | 1.088063e-49 | -8.615850e-47 |
| Msa0828560 | Msa0973250 | 0.811082 | 8.365428e-51 | -8.615850e-47 |
| Msa0828830 | Msa0973250 | 0.802204 | 6.267737e-49 | -8.615850e-47 |
| Msa0124130 | Msa0973250 | 0.819118 | 1.373580e-52 | -8.615850e-47 |
| Msa0124280 | Msa0973250 | 0.819094 | 1.390929e-52 | -8.615850e-47 |
| Msa0130570 | Msa0973250 | 0.810148 | 1.331381e-50 | -8.615850e-47 |
| Msa0140780 | Msa0973250 | 0.816067 | 6.695045e-52 | -8.615850e-47 |
| Msa0141600 | Msa0973250 | 0.803956 | 2.721849e-49 | -8.615850e-47 |
| Msa0146260 | Msa0973250 | 0.805131 | 1.547825e-49 | -8.615850e-47 |
| Msa0149140 | Msa0973250 | 0.804478 | 2.119573e-49 | -8.615850e-47 |
| Msa0156250 | Msa0973250 | 0.806296 | 8.811756e-50 | -8.615850e-47 |
| Msa0157290 | Msa0973250 | 0.850813 | 1.332455e-60 | -8.615850e-47 |
| Msa0163980 | Msa0973250 | 0.806517 | 7.915633e-50 | -8.615850e-47 |
| Msa0168650 | Msa0973250 | 0.810645 | 1.039723e-50 | -8.615850e-47 |
| Msa0176470 | Msa0973250 | 0.830456 | 2.907658e-55 | -8.615850e-47 |
| Msa0185490 | Msa0973250 | 0.818046 | 2.404949e-52 | -8.615850e-47 |
| Msa0191040 | Msa0973250 | 0.817545 | 3.120286e-52 | -8.615850e-47 |
| Msa0191250 | Msa0973250 | 0.804966 | 1.675805e-49 | -8.615850e-47 |
| Msa0194380 | Msa0973250 | 0.804776 | 1.836048e-49 | -8.615850e-47 |
| Msa0197420 | Msa0973250 | 0.808675 | 2.756080e-50 | -8.615850e-47 |
| Msa0197930 | Msa0973250 | 0.860243 | 2.365810e-63 | -8.615850e-47 |
| Msa0200260 | Msa0973250 | 0.818049 | 2.401211e-52 | -8.615850e-47 |
| Msa0203030 | Msa0973250 | 0.826751 | 2.283951e-54 | -8.615850e-47 |
| Msa0218780 | Msa0973250 | 0.820636 | 6.178880e-53 | -8.615850e-47 |
| Msa0219190 | Msa0973250 | 0.835721 | 1.423100e-56 | -8.615850e-47 |
| Msa0221290 | Msa0973250 | 0.818041 | 2.410331e-52 | -8.615850e-47 |
| Msa0233340 | Msa0973250 | 0.817143 | 3.841826e-52 | -8.615850e-47 |
| Msa0236110 | Msa0973250 | 0.818809 | 1.614855e-52 | -8.615850e-47 |
| Msa0373960 | Msa0973250 | 0.800391 | 1.473340e-48 | -8.615850e-47 |
| Msa0382010 | Msa0973250 | 0.825499 | 4.534019e-54 | -8.615850e-47 |
| Msa0385390 | Msa0973250 | 0.833023 | 6.767962e-56 | -8.615850e-47 |
| Msa0387510 | Msa0973250 | 0.813102 | 3.032797e-51 | -8.615850e-47 |
| Msa0392420 | Msa0973250 | 0.844282 | 8.325611e-59 | -8.615850e-47 |
| Msa0392460 | Msa0973250 | 0.842801 | 2.070957e-58 | -8.615850e-47 |
| Msa0392490 | Msa0973250 | 0.855355 | 6.671537e-62 | -8.615850e-47 |
| Msa0406000 | Msa0973250 | 0.819739 | 9.916277e-53 | -8.615850e-47 |
| Msa0407900 | Msa0973250 | 0.801363 | 9.329417e-49 | -8.615850e-47 |
| Msa0407920 | Msa0973250 | 0.819394 | 1.188741e-52 | -8.615850e-47 |
| Msa0410500 | Msa0973250 | 0.810263 | 1.257232e-50 | -8.615850e-47 |
| Msa0410650 | Msa0973250 | 0.819757 | 9.821672e-53 | -8.615850e-47 |
| Msa0415320 | Msa0973250 | 0.802180 | 6.340450e-49 | -8.615850e-47 |
| Msa0417880 | Msa0973250 | 0.814868 | 1.237451e-51 | -8.615850e-47 |
| Msa0419820 | Msa0973250 | 0.807054 | 6.094827e-50 | -8.615850e-47 |
| Msa0436500 | Msa0973250 | 0.818932 | 1.514407e-52 | -8.615850e-47 |
| Msa0450440 | Msa0973250 | 0.816652 | 4.951029e-52 | -8.615850e-47 |
| Msa0451400 | Msa0973250 | 0.832305 | 1.019853e-55 | -8.615850e-47 |
| Msa0452920 | Msa0973250 | 0.802422 | 5.652305e-49 | -8.615850e-47 |
| Msa0461720 | Msa0973250 | 0.818288 | 2.119928e-52 | -8.615850e-47 |
| Msa0467430 | Msa0973250 | 0.803318 | 3.691961e-49 | -8.615850e-47 |
| Msa0475790 | Msa0973250 | 0.822645 | 2.119908e-53 | -8.615850e-47 |
| Msa0239570 | Msa0973250 | 0.823164 | 1.604704e-53 | -8.615850e-47 |
| Msa0243100 | Msa0973250 | 0.825088 | 5.673168e-54 | -8.615850e-47 |
| Msa0252770 | Msa0973250 | 0.819336 | 1.225053e-52 | -8.615850e-47 |
| Msa0261340 | Msa0973250 | 0.815120 | 1.087823e-51 | -8.615850e-47 |
| Msa0287650 | Msa0973250 | 0.841661 | 4.151592e-58 | -8.615850e-47 |
| Msa0297740 | Msa0973250 | 0.804272 | 2.339395e-49 | -8.615850e-47 |
| Msa0298240 | Msa0973250 | 0.844941 | 5.534051e-59 | -8.615850e-47 |
| Msa0306120 | Msa0973250 | 0.804674 | 1.928917e-49 | -8.615850e-47 |
| Msa0306300 | Msa0973250 | 0.812501 | 4.106795e-51 | -8.615850e-47 |
| Msa0308830 | Msa0973250 | 0.805089 | 1.579197e-49 | -8.615850e-47 |
| Msa0311690 | Msa0973250 | 0.811319 | 7.430002e-51 | -8.615850e-47 |
| Msa0314630 | Msa0973250 | 0.826598 | 2.484346e-54 | -8.615850e-47 |
| Msa0316810 | Msa0973250 | 0.806617 | 7.539192e-50 | -8.615850e-47 |
| Msa0317280 | Msa0973250 | 0.833381 | 5.509208e-56 | -8.615850e-47 |
| Msa0317340 | Msa0973250 | 0.814948 | 1.187621e-51 | -8.615850e-47 |
| Msa0329620 | Msa0973250 | 0.833605 | 4.844476e-56 | -8.615850e-47 |
| Msa0334500 | Msa0973250 | 0.820410 | 6.959991e-53 | -8.615850e-47 |
| Msa0344570 | Msa0973250 | 0.834985 | 2.183547e-56 | -8.615850e-47 |
| Msa0359250 | Msa0973250 | 0.855282 | 7.004056e-62 | -8.615850e-47 |
| Msa0363070 | Msa0973250 | 0.802757 | 4.820376e-49 | -8.615850e-47 |
| Msa0487570 | Msa0973250 | 0.849560 | 2.990052e-60 | -8.615850e-47 |
| Msa0487630 | Msa0973250 | 0.860980 | 1.414756e-63 | -8.615850e-47 |
| Msa0492190 | Msa0973250 | 0.815229 | 1.028962e-51 | -8.615850e-47 |
| Msa0498060 | Msa0973250 | 0.802957 | 4.383589e-49 | -8.615850e-47 |
| Msa0503580 | Msa0973250 | 0.817853 | 2.658391e-52 | -8.615850e-47 |
| Msa0507680 | Msa0973250 | 0.815642 | 8.324980e-52 | -8.615850e-47 |
| Msa0510980 | Msa0973250 | 0.811858 | 5.672361e-51 | -8.615850e-47 |
| Msa0513160 | Msa0973250 | 0.803462 | 3.445654e-49 | -8.615850e-47 |
| Msa0520510 | Msa0973250 | 0.806680 | 7.314833e-50 | -8.615850e-47 |
| Msa0523000 | Msa0973250 | 0.800001 | 1.768870e-48 | -8.615850e-47 |
| Msa0527550 | Msa0973250 | 0.826756 | 2.278289e-54 | -8.615850e-47 |
| Msa0534590 | Msa0973250 | 0.812349 | 4.434003e-51 | -8.615850e-47 |
| Msa0534930 | Msa0973250 | 0.850769 | 1.370187e-60 | -8.615850e-47 |
| Msa0535040 | Msa0973250 | 0.866725 | 2.310749e-65 | -8.615850e-47 |
| Msa0537920 | Msa0973250 | 0.809108 | 2.226542e-50 | -8.615850e-47 |
| Msa0571140 | Msa0973250 | 0.817718 | 2.851109e-52 | -8.615850e-47 |
| Msa0574890 | Msa0973250 | 0.822191 | 2.703587e-53 | -8.615850e-47 |
| Msa0575740 | Msa0973250 | 0.830678 | 2.564936e-55 | -8.615850e-47 |
| Msa0590800 | Msa0973250 | 0.808513 | 2.984557e-50 | -8.615850e-47 |
| Msa0591790 | Msa0973250 | 0.853423 | 2.414038e-61 | -8.615850e-47 |
| Msa0594090 | Msa0973250 | 0.807317 | 5.361188e-50 | -8.615850e-47 |
| Msa0602240 | Msa0973250 | 0.804298 | 2.309695e-49 | -8.615850e-47 |
| Msa0602250 | Msa0973250 | 0.811311 | 7.461568e-51 | -8.615850e-47 |
| Msa0843220 | Msa0973250 | 0.811056 | 8.470749e-51 | -8.615850e-47 |
| Msa0844560 | Msa0973250 | 0.804936 | 1.700588e-49 | -8.615850e-47 |
| Msa0849280 | Msa0973250 | 0.800757 | 1.240622e-48 | -8.615850e-47 |
| Msa0853660 | Msa0973250 | 0.804874 | 1.752229e-49 | -8.615850e-47 |
| Msa0862100 | Msa0973250 | 0.830502 | 2.833537e-55 | -8.615850e-47 |
| Msa0867350 | Msa0973250 | 0.853729 | 1.971318e-61 | -8.615850e-47 |
| Msa0867890 | Msa0973250 | 0.800591 | 1.341578e-48 | -8.615850e-47 |
| Msa0872310 | Msa0973250 | 0.819590 | 1.072182e-52 | -8.615850e-47 |
| Msa0880140 | Msa0973250 | 0.849499 | 3.109537e-60 | -8.615850e-47 |
| Msa0880440 | Msa0973250 | 0.808033 | 3.777601e-50 | -8.615850e-47 |
| Msa0885060 | Msa0973250 | 0.850579 | 1.550223e-60 | -8.615850e-47 |
| Msa0895790 | Msa0973250 | 0.800772 | 1.232099e-48 | -8.615850e-47 |
| Msa0896540 | Msa0973250 | 0.835527 | 1.593111e-56 | -8.615850e-47 |
| Msa0896970 | Msa0973250 | 0.823148 | 1.618483e-53 | -8.615850e-47 |
| Msa0898730 | Msa0973250 | 0.852809 | 3.617411e-61 | -8.615850e-47 |
| Msa0903760 | Msa0973250 | 0.857715 | 1.350865e-62 | -8.615850e-47 |
| Msa0905550 | Msa0973250 | 0.800312 | 1.528604e-48 | -8.615850e-47 |
| Msa0908050 | Msa0973250 | 0.803624 | 3.189983e-49 | -8.615850e-47 |
| Msa0925180 | Msa0973250 | 0.801839 | 7.450202e-49 | -8.615850e-47 |
| Msa0929870 | Msa0973250 | 0.844465 | 7.432988e-59 | -8.615850e-47 |
| Msa0930780 | Msa0973250 | 0.815923 | 7.208841e-52 | -8.615850e-47 |
| Msa0936410 | Msa0973250 | 0.951701 | 1.171445e-109 | -8.615850e-47 |
| Msa0940460 | Msa0973250 | 0.804833 | 1.786980e-49 | -8.615850e-47 |
| Msa0941820 | Msa0973250 | 0.833471 | 5.234202e-56 | -8.615850e-47 |
| Msa0944760 | Msa0973250 | 0.815836 | 7.536603e-52 | -8.615850e-47 |
| Msa0961560 | Msa0973250 | 0.822373 | 2.452568e-53 | -8.615850e-47 |
| Msa0961690 | Msa0973250 | 0.851165 | 1.059927e-60 | -8.615850e-47 |
| Msa0973250 | Msa0979510 | 0.813095 | 3.044606e-51 | -8.615850e-47 |
| Msa0973250 | Msa0999300 | 0.865594 | 5.272604e-65 | -8.615850e-47 |
| Msa0973250 | Msa0999360 | 0.810136 | 1.339212e-50 | -8.615850e-47 |
| Msa0973250 | Msa0999410 | 0.800406 | 1.463144e-48 | -8.615850e-47 |
| Msa0973250 | Msa1001890 | 0.811274 | 7.600710e-51 | -8.615850e-47 |
| Msa0973250 | Msa1005870 | 0.818926 | 1.518940e-52 | -8.615850e-47 |
| Msa0973250 | Msa1007270 | 0.800365 | 1.491311e-48 | -8.615850e-47 |
| Msa0973250 | Msa1013770 | 0.805254 | 1.459131e-49 | -8.615850e-47 |
| Msa0973250 | Msa1037900 | 0.836070 | 1.160330e-56 | -8.615850e-47 |
| Msa0973250 | Msa1037910 | 0.833902 | 4.082968e-56 | -8.615850e-47 |
| Msa0973250 | Msa1037920 | 0.818988 | 1.470317e-52 | -8.615850e-47 |
| Msa0973250 | Msa1041530 | 0.845487 | 3.938585e-59 | -8.615850e-47 |
| Msa0973250 | Msa1042670 | 0.821291 | 4.364453e-53 | -8.615850e-47 |
| Msa0973250 | Msa1047980 | 0.805712 | 1.169189e-49 | -8.615850e-47 |
| Msa0973250 | Msa1048920 | 0.810363 | 1.196183e-50 | -8.615850e-47 |
| Msa0973250 | Msa1063950 | 0.808582 | 2.885269e-50 | -8.615850e-47 |
| Msa0973250 | Msa1073340 | 0.833795 | 4.342950e-56 | -8.615850e-47 |
| Msa0973250 | Msa1081570 | 0.851086 | 1.116156e-60 | -8.615850e-47 |
| Msa0973250 | Msa1085200 | 0.813146 | 2.966166e-51 | -8.615850e-47 |
| Msa0973250 | Msa1092010 | 0.818885 | 1.552262e-52 | -8.615850e-47 |
| Msa0973250 | Msa1096210 | 0.803314 | 3.699260e-49 | -8.615850e-47 |
| Msa0973250 | Msa1098560 | 0.800201 | 1.610679e-48 | -8.615850e-47 |
| Msa0973250 | Msa1103500 | 0.800974 | 1.120480e-48 | -8.615850e-47 |
| Msa0973250 | Msa1123380 | 0.801769 | 7.702047e-49 | -8.615850e-47 |
| Msa0973250 | Msa1123880 | 0.815870 | 7.407454e-52 | -8.615850e-47 |
| Msa0973250 | Msa1125000 | 0.810814 | 9.560507e-51 | -8.615850e-47 |
| Msa0973250 | Msa1127140 | 0.843921 | 1.040367e-58 | -8.615850e-47 |
| Msa0973250 | Msa1129960 | 0.841458 | 4.694558e-58 | -8.615850e-47 |
| Msa0973250 | Msa1129970 | 0.826700 | 2.349097e-54 | -8.615850e-47 |
| Msa0973250 | Msa1129980 | 0.811471 | 6.887153e-51 | -8.615850e-47 |
| Msa0973250 | Msa1130010 | 0.819927 | 8.980341e-53 | -8.615850e-47 |
| Msa0973250 | Msa1133000 | 0.811754 | 5.976007e-51 | -8.615850e-47 |
| Msa0973250 | Msa1139810 | 0.809914 | 1.495304e-50 | -8.615850e-47 |
| Msa0973250 | Msa1140690 | 0.800365 | 1.491500e-48 | -8.615850e-47 |
| Msa0973250 | Msa1145020 | 0.837184 | 6.035836e-57 | -8.615850e-47 |
| Msa0973250 | Msa1151910 | 0.818873 | 1.561901e-52 | -8.615850e-47 |
| Msa0973250 | Msa1166400 | 0.836208 | 1.070516e-56 | -8.615850e-47 |
| Msa0973250 | Msa1168160 | 0.816031 | 6.820020e-52 | -8.615850e-47 |
| Msa0973250 | Msa1169710 | 0.802609 | 5.171711e-49 | -8.615850e-47 |
| Msa0973250 | Msa1169990 | 0.832722 | 8.037384e-56 | -8.615850e-47 |
| Msa0973250 | Msa1172450 | 0.819813 | 9.535243e-53 | -8.615850e-47 |
| Msa0973250 | Msa1176160 | 0.807779 | 4.279017e-50 | -8.615850e-47 |
| Msa0973250 | Msa1179280 | 0.809647 | 1.706656e-50 | -8.615850e-47 |
| Msa0973250 | Msa1200440 | 0.820640 | 6.165074e-53 | -8.615850e-47 |
| Msa0973250 | Msa1201110 | 0.821885 | 3.181883e-53 | -8.615850e-47 |
| Msa0973250 | Msa1201160 | 0.818442 | 1.955805e-52 | -8.615850e-47 |
| Msa0973250 | Msa1214890 | 0.808107 | 3.642719e-50 | -8.615850e-47 |
| Msa0973250 | Msa1218590 | 0.802616 | 5.156595e-49 | -8.615850e-47 |
| Msa0973250 | Msa1228190 | 0.828442 | 8.971764e-55 | -8.615850e-47 |
| Msa0973250 | Msa1228610 | 0.825557 | 4.393751e-54 | -8.615850e-47 |
| Msa0973250 | Msa1271260 | 0.839175 | 1.853783e-57 | -8.615850e-47 |
| Msa0973250 | Msa1276660 | 0.806947 | 6.422654e-50 | -8.615850e-47 |
| Msa0973250 | Msa1293770 | 0.834423 | 3.022515e-56 | -8.615850e-47 |
| Msa0973250 | Msa1293780 | 0.803303 | 3.717437e-49 | -8.615850e-47 |
| Msa0973250 | Msa1294290 | 0.810771 | 9.765693e-51 | -8.615850e-47 |
| Msa0973250 | Msa1300490 | 0.804284 | 2.325422e-49 | -8.615850e-47 |
| Msa0973250 | Msa1303250 | 0.816902 | 4.351624e-52 | -8.615850e-47 |
| Msa0973250 | Msa1305510 | 0.831193 | 1.917921e-55 | -8.615850e-47 |
| Msa0973250 | Msa1308380 | 0.803939 | 2.743965e-49 | -8.615850e-47 |
| Msa0973250 | Msa1320740 | 0.812749 | 3.624152e-51 | -8.615850e-47 |
| Msa0973250 | Msa1331910 | 0.808188 | 3.501679e-50 | -8.615850e-47 |
| Msa0973250 | Msa1345420 | 0.803650 | 3.149783e-49 | -8.615850e-47 |
| Msa0973250 | Msa1357240 | 0.807277 | 5.468710e-50 | -8.615850e-47 |
| Msa0973250 | Msa1358280 | 0.801691 | 7.989998e-49 | -8.615850e-47 |
| Msa0973250 | Msa1374040 | 0.803936 | 2.747839e-49 | -8.615850e-47 |
| Msa0973250 | Msa1374550 | 0.864976 | 8.250702e-65 | -8.615850e-47 |
| Msa0973250 | Msa1379970 | 0.806657 | 7.397207e-50 | -8.615850e-47 |
| Msa0973250 | Msa1394890 | 0.837188 | 6.024614e-57 | -8.615850e-47 |
| Msa0973250 | Msa1420060 | 0.854025 | 1.619722e-61 | -8.615850e-47 |
| Msa0973250 | Msa1421550 | 0.869773 | 2.407733e-66 | -8.615850e-47 |
| Msa0973250 | Msa1423460 | 0.820918 | 5.320482e-53 | -8.615850e-47 |
| Msa0973250 | Msa1430240 | 0.825463 | 4.624293e-54 | -8.615850e-47 |
| Msa0973250 | Msa1445190 | 0.802615 | 5.156801e-49 | -8.615850e-47 |
| Msa0973250 | Msa1459530 | 0.826608 | 2.471661e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973250 | MtrunA17_Chr6g0452191 | 89.583 | 192 | 12 | 2 | 1 | 184 | 1 | 192 | 3.20e-100 | 287 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973250 | AT3G28420.1 | 33.149 | 181 | 88 | 4 | 19 | 166 | 11 | 191 | 3.02e-18 | 79.3 |
Find 23 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTACTATTCCAATAATT+TGG | 0.174987 | 6_4:+5719759 | None:intergenic |
| TGTCTATGAAGCCAAATTAT+TGG | 0.179250 | 6_4:-5719770 | Msa0973250:CDS |
| TTCATTGAACTCTTCCTCTT+TGG | 0.246225 | 6_4:+5719926 | None:intergenic |
| CTTAGGTACATTTCTTCTAA+TGG | 0.291653 | 6_4:-5719877 | Msa0973250:CDS |
| CAACAAGAAACTTCAATCTT+TGG | 0.300187 | 6_4:+5719432 | None:intergenic |
| AAGCTTTCATAGCTATGTTT+AGG | 0.369886 | 6_4:-5719521 | Msa0973250:CDS |
| ACATGAAAAGAATGGCTAAT+AGG | 0.384484 | 6_4:+5719790 | None:intergenic |
| GAATGAGATTGAGGAGGAAG+AGG | 0.437629 | 6_4:-5719592 | Msa0973250:CDS |
| ATAGGATGACATTGAGGATC+AGG | 0.447933 | 6_4:+5719808 | None:intergenic |
| ACATGTTGAAGTGTTGTCTA+AGG | 0.463908 | 6_4:-5719565 | Msa0973250:CDS |
| CTTCATAGACATGAAAAGAA+TGG | 0.497405 | 6_4:+5719782 | None:intergenic |
| GGAAGAATTGAATGAAAGAG+TGG | 0.499912 | 6_4:-5719544 | Msa0973250:CDS |
| ATTGAAGTTTCTTGTTGTTG+AGG | 0.509043 | 6_4:-5719426 | None:intergenic |
| AATATTACAAACAACAATGT+TGG | 0.513485 | 6_4:-5719641 | Msa0973250:CDS |
| CAAACTATAATGTTCACCTT+AGG | 0.521506 | 6_4:-5719894 | Msa0973250:CDS |
| AGAGTTTCTTAGTTGAGAAG+TGG | 0.537952 | 6_4:-5719845 | Msa0973250:CDS |
| CCTCAATCTCATTCTCAACA+TGG | 0.570203 | 6_4:+5719601 | None:intergenic |
| CATTAGAAGAAATGTACCTA+AGG | 0.572803 | 6_4:+5719878 | None:intergenic |
| CCATGTTGAGAATGAGATTG+AGG | 0.593248 | 6_4:-5719601 | Msa0973250:CDS |
| ATGTGAAAGAGAAACCAAAG+AGG | 0.618564 | 6_4:-5719940 | Msa0973250:CDS |
| TTGATTTCAGATGTTAAACA+AGG | 0.621029 | 6_4:-5719492 | Msa0973250:CDS |
| TGGCTAATAGGATGACATTG+AGG | 0.643978 | 6_4:+5719802 | None:intergenic |
| TGTTGAGAATGAGATTGAGG+AGG | 0.668905 | 6_4:-5719598 | Msa0973250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTACTATTCCAATAATT+TGG | + | chr6_4:5719632-5719651 | None:intergenic | 20.0% |
| !! | AATATTACAAACAACAATGT+TGG | - | chr6_4:5719747-5719766 | Msa0973250:CDS | 20.0% |
| ! | TTGATTTCAGATGTTAAACA+AGG | - | chr6_4:5719896-5719915 | Msa0973250:CDS | 25.0% |
| !! | TTAAACAAGGTGAAGATTTT+AGG | - | chr6_4:5719909-5719928 | Msa0973250:CDS | 25.0% |
| !!! | GTGTCAAATTTGATGTTTTT+TGG | + | chr6_4:5719937-5719956 | None:intergenic | 25.0% |
| CAAACTATAATGTTCACCTT+AGG | - | chr6_4:5719494-5719513 | Msa0973250:CDS | 30.0% | |
| CATTAGAAGAAATGTACCTA+AGG | + | chr6_4:5719513-5719532 | None:intergenic | 30.0% | |
| CTTAGGTACATTTCTTCTAA+TGG | - | chr6_4:5719511-5719530 | Msa0973250:CDS | 30.0% | |
| ACATGAAAAGAATGGCTAAT+AGG | + | chr6_4:5719601-5719620 | None:intergenic | 30.0% | |
| CTTCATAGACATGAAAAGAA+TGG | + | chr6_4:5719609-5719628 | None:intergenic | 30.0% | |
| TGTCTATGAAGCCAAATTAT+TGG | - | chr6_4:5719618-5719637 | Msa0973250:CDS | 30.0% | |
| AAGCTTTCATAGCTATGTTT+AGG | - | chr6_4:5719867-5719886 | Msa0973250:CDS | 30.0% | |
| CAACAAGAAACTTCAATCTT+TGG | + | chr6_4:5719959-5719978 | None:intergenic | 30.0% | |
| ATGTGAAAGAGAAACCAAAG+AGG | - | chr6_4:5719448-5719467 | Msa0973250:CDS | 35.0% | |
| TTCATTGAACTCTTCCTCTT+TGG | + | chr6_4:5719465-5719484 | None:intergenic | 35.0% | |
| AGAGTTTCTTAGTTGAGAAG+TGG | - | chr6_4:5719543-5719562 | Msa0973250:CDS | 35.0% | |
| !! | ACATGTTGAAGTGTTGTCTA+AGG | - | chr6_4:5719823-5719842 | Msa0973250:CDS | 35.0% |
| GGAAGAATTGAATGAAAGAG+TGG | - | chr6_4:5719844-5719863 | Msa0973250:CDS | 35.0% | |
| ATAGGATGACATTGAGGATC+AGG | + | chr6_4:5719583-5719602 | None:intergenic | 40.0% | |
| TGGCTAATAGGATGACATTG+AGG | + | chr6_4:5719589-5719608 | None:intergenic | 40.0% | |
| CCTCAATCTCATTCTCAACA+TGG | + | chr6_4:5719790-5719809 | None:intergenic | 40.0% | |
| CCATGTTGAGAATGAGATTG+AGG | - | chr6_4:5719787-5719806 | Msa0973250:CDS | 40.0% | |
| TGTTGAGAATGAGATTGAGG+AGG | - | chr6_4:5719790-5719809 | Msa0973250:CDS | 40.0% | |
| GAATGAGATTGAGGAGGAAG+AGG | - | chr6_4:5719796-5719815 | Msa0973250:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 5719428 | 5719982 | 5719428 | ID=Msa0973250;Name=Msa0973250 |
| chr6_4 | mRNA | 5719428 | 5719982 | 5719428 | ID=Msa0973250-mRNA-1;Parent=Msa0973250;Name=Msa0973250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|184 |
| chr6_4 | exon | 5719428 | 5719982 | 5719428 | ID=Msa0973250-mRNA-1:exon:2420;Parent=Msa0973250-mRNA-1 |
| chr6_4 | CDS | 5719428 | 5719982 | 5719428 | ID=Msa0973250-mRNA-1:cds;Parent=Msa0973250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
