Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299110 | XP_003608925.1 | 75.062 | 401 | 35 | 4 | 1 | 336 | 1 | 401 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299110 | sp|O48716|JGB_ARATH | 41.327 | 196 | 105 | 5 | 137 | 329 | 228 | 416 | 9.09e-41 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299110 | G7JNR9 | 75.062 | 401 | 35 | 4 | 1 | 336 | 1 | 401 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012740 | Msa1299110 | 0.809819 | 1.566729e-50 | -8.615850e-47 |
| Msa0626230 | Msa1299110 | 0.825834 | 3.776684e-54 | -8.615850e-47 |
| Msa0140910 | Msa1299110 | 0.815111 | 1.093048e-51 | -8.615850e-47 |
| Msa1299110 | Msa1327820 | 0.800005 | 1.765032e-48 | -8.615850e-47 |
| Msa1299110 | Msa1329990 | 0.805501 | 1.294760e-49 | -8.615850e-47 |
| Msa1299110 | Msa1397540 | 0.816083 | 6.637548e-52 | -8.615850e-47 |
| Msa0365360 | Msa1299110 | 0.800675 | 1.289546e-48 | -8.615850e-47 |
| Msa1018720 | Msa1299110 | 0.816489 | 5.387484e-52 | -8.615850e-47 |
| Msa1032350 | Msa1299110 | 0.814794 | 1.285146e-51 | -8.615850e-47 |
| Msa1069300 | Msa1299110 | 0.801884 | 7.294746e-49 | -8.615850e-47 |
| Msa0253370 | Msa1299110 | 0.810673 | 1.025358e-50 | -8.615850e-47 |
| Msa0290650 | Msa1299110 | 0.808754 | 2.650969e-50 | -8.615850e-47 |
| Msa0330400 | Msa1299110 | 0.807623 | 4.618277e-50 | -8.615850e-47 |
| Msa1136140 | Msa1299110 | 0.801834 | 7.467830e-49 | -8.615850e-47 |
| Msa0585930 | Msa1299110 | 0.801660 | 8.106523e-49 | -8.615850e-47 |
| Msa0903730 | Msa1299110 | 0.801386 | 9.227938e-49 | -8.615850e-47 |
| Msa0973130 | Msa1299110 | 0.803309 | 3.706580e-49 | -8.615850e-47 |
| Msa0973230 | Msa1299110 | 0.806656 | 7.398109e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299110 | MtrunA17_Chr4g0059501 | 75.062 | 401 | 35 | 4 | 1 | 336 | 1 | 401 | 0.0 | 552 |
| Msa1299110 | MtrunA17_Chr3g0118031 | 45.074 | 406 | 131 | 13 | 14 | 336 | 18 | 414 | 3.75e-97 | 293 |
| Msa1299110 | MtrunA17_Chr5g0414581 | 51.092 | 229 | 81 | 4 | 137 | 336 | 222 | 448 | 4.65e-74 | 235 |
| Msa1299110 | MtrunA17_Chr8g0381281 | 49.569 | 232 | 107 | 4 | 108 | 333 | 203 | 430 | 3.91e-71 | 228 |
| Msa1299110 | MtrunA17_Chr4g0034121 | 31.737 | 334 | 158 | 8 | 59 | 330 | 138 | 463 | 4.00e-46 | 163 |
| Msa1299110 | MtrunA17_Chr5g0403011 | 45.408 | 196 | 99 | 4 | 137 | 330 | 229 | 418 | 8.90e-46 | 161 |
| Msa1299110 | MtrunA17_Chr1g0154301 | 42.211 | 199 | 99 | 7 | 137 | 329 | 241 | 429 | 1.24e-42 | 153 |
| Msa1299110 | MtrunA17_Chr4g0058101 | 33.441 | 311 | 164 | 9 | 48 | 332 | 40 | 333 | 1.50e-42 | 150 |
| Msa1299110 | MtrunA17_Chr3g0140101 | 31.879 | 298 | 144 | 9 | 90 | 333 | 119 | 411 | 1.16e-38 | 142 |
| Msa1299110 | MtrunA17_Chr2g0331341 | 40.796 | 201 | 108 | 6 | 137 | 330 | 26 | 222 | 1.33e-38 | 137 |
| Msa1299110 | MtrunA17_Chr4g0020751 | 34.615 | 234 | 128 | 10 | 108 | 334 | 167 | 382 | 4.86e-34 | 129 |
| Msa1299110 | MtrunA17_Chr1g0162961 | 26.432 | 227 | 136 | 7 | 101 | 314 | 120 | 328 | 2.55e-14 | 73.6 |
| Msa1299110 | MtrunA17_Chr8g0348461 | 27.542 | 236 | 101 | 12 | 109 | 329 | 243 | 423 | 1.93e-11 | 65.1 |
| Msa1299110 | MtrunA17_Chr1g0185501 | 29.630 | 135 | 76 | 4 | 198 | 330 | 22 | 139 | 6.52e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299110 | AT5G50120.1 | 54.146 | 205 | 83 | 3 | 137 | 334 | 187 | 387 | 2.13e-74 | 234 |
| Msa1299110 | AT1G24530.1 | 38.211 | 369 | 151 | 10 | 28 | 333 | 51 | 405 | 3.33e-69 | 222 |
| Msa1299110 | AT1G24130.1 | 57.426 | 202 | 78 | 3 | 137 | 333 | 214 | 412 | 1.04e-68 | 221 |
| Msa1299110 | AT3G50390.1 | 41.327 | 196 | 108 | 5 | 137 | 330 | 233 | 423 | 1.26e-43 | 156 |
| Msa1299110 | AT2G26490.1 | 41.327 | 196 | 105 | 5 | 137 | 329 | 228 | 416 | 9.24e-42 | 151 |
| Msa1299110 | AT3G18950.1 | 43.216 | 199 | 102 | 5 | 137 | 330 | 271 | 463 | 1.03e-41 | 151 |
| Msa1299110 | AT3G18950.1 | 23.684 | 266 | 142 | 7 | 94 | 330 | 133 | 366 | 8.35e-12 | 66.2 |
| Msa1299110 | AT4G34380.1 | 40.887 | 203 | 105 | 6 | 138 | 330 | 258 | 455 | 8.67e-39 | 144 |
| Msa1299110 | AT3G51930.1 | 31.014 | 345 | 155 | 12 | 60 | 334 | 64 | 395 | 1.46e-37 | 139 |
| Msa1299110 | AT1G49450.1 | 39.512 | 205 | 107 | 6 | 137 | 330 | 267 | 465 | 1.92e-37 | 140 |
| Msa1299110 | AT1G47610.1 | 37.019 | 208 | 106 | 9 | 137 | 334 | 157 | 349 | 3.10e-33 | 126 |
| Msa1299110 | AT1G47610.1 | 28.061 | 196 | 108 | 8 | 93 | 274 | 171 | 347 | 7.31e-11 | 63.2 |
| Msa1299110 | AT4G02730.1 | 28.019 | 207 | 125 | 8 | 126 | 329 | 12 | 197 | 9.26e-12 | 65.5 |
| Msa1299110 | AT3G18130.1 | 30.366 | 191 | 107 | 9 | 150 | 331 | 7 | 180 | 7.36e-11 | 62.8 |
Find 54 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTTGGACTGTGATATTA+AGG | 0.272095 | 8_3:+60107215 | Msa1299110:CDS |
| ACAATAGTTAGGCACTTAAT+TGG | 0.277575 | 8_3:-60107141 | None:intergenic |
| GTTGAGGGTGAGAATGAATA+TGG | 0.282172 | 8_3:-60102891 | None:intergenic |
| TCAATATTGGTATCTGAAAA+AGG | 0.299182 | 8_3:+60106931 | Msa1299110:CDS |
| ATATCCTCTTTAACACTTGT+AGG | 0.315862 | 8_3:+60102814 | Msa1299110:CDS |
| AACCAAAGACTTCACGTGTT+TGG | 0.328930 | 8_3:+60106684 | Msa1299110:CDS |
| TTCCAAACACGTGAAGTCTT+TGG | 0.336054 | 8_3:-60106686 | None:intergenic |
| AGGATAAGACAATTCGGATT+TGG | 0.370163 | 8_3:+60107052 | Msa1299110:CDS |
| AACACTAACACAATAGTATC+TGG | 0.378047 | 8_3:+60102922 | Msa1299110:CDS |
| GTATTGTTGTTTGAGTGTTT+TGG | 0.382666 | 8_3:+60107104 | Msa1299110:CDS |
| TTGAGATTCGTTGTTGATAT+TGG | 0.387479 | 8_3:-60103031 | None:intergenic |
| CACAAAGTCTATATTGTGTT+TGG | 0.388010 | 8_3:+60106996 | Msa1299110:CDS |
| TTTGGCTGTGGTTTCCGATT+TGG | 0.391666 | 8_3:+60107014 | Msa1299110:CDS |
| AAGAATTATGAAATTGTTGT+GGG | 0.404491 | 8_3:-60102753 | None:intergenic |
| ACATTTGTTAGTTGATACTT+TGG | 0.417662 | 8_3:+60106831 | Msa1299110:CDS |
| GTCTATATTGTGTTTGGCTG+TGG | 0.439005 | 8_3:+60107002 | Msa1299110:CDS |
| AGTGATCAAGCACAATAGTT+AGG | 0.447101 | 8_3:-60107152 | None:intergenic |
| AGACTTCACGTGTTTGGAAT+CGG | 0.453279 | 8_3:+60106690 | Msa1299110:CDS |
| AAGATAACAAAATCCGCGTT+TGG | 0.462988 | 8_3:+60103001 | Msa1299110:CDS |
| AACACAATAGTATCTGGAAA+TGG | 0.466792 | 8_3:+60102928 | Msa1299110:CDS |
| TGCATGTGATAGATCAATAT+TGG | 0.470368 | 8_3:+60106918 | Msa1299110:CDS |
| GCAATCACAGTTTCTAATGA+TGG | 0.473911 | 8_3:+60106742 | Msa1299110:CDS |
| GAAGAATTATGAAATTGTTG+TGG | 0.479398 | 8_3:-60102754 | None:intergenic |
| AATGGTAATTTGATAGTCAT+AGG | 0.480190 | 8_3:+60106958 | Msa1299110:CDS |
| ACTTTGGAGAAACACAGGTC+TGG | 0.494679 | 8_3:+60106847 | Msa1299110:CDS |
| TGGACTGTGATATTAAGGTT+TGG | 0.496672 | 8_3:+60107220 | Msa1299110:CDS |
| TAGTGTTAATTGATTGTTGA+GGG | 0.498235 | 8_3:-60102906 | None:intergenic |
| AGAACCACTGCACACCAAAT+CGG | 0.501162 | 8_3:-60107028 | None:intergenic |
| AAATATACCGTTTACAGAAG+AGG | 0.503801 | 8_3:-60107255 | None:intergenic |
| CTTTGGAGAAACACAGGTCT+GGG | 0.512071 | 8_3:+60106848 | Msa1299110:CDS |
| TTCTTGGGACAGAACAATCA+AGG | 0.526842 | 8_3:+60106654 | Msa1299110:intron |
| CAGGTCTGGGATTAATGCAT+TGG | 0.528247 | 8_3:+60106861 | Msa1299110:CDS |
| GTTCTGAGGATAAGACAATT+CGG | 0.528674 | 8_3:+60107046 | Msa1299110:CDS |
| GTAGGAAAATTCCTTTACAC+TGG | 0.545108 | 8_3:+60102832 | Msa1299110:CDS |
| GCATTGGCTCTTAACAGTGA+TGG | 0.550237 | 8_3:+60106877 | Msa1299110:CDS |
| GTTATTAGAGTCGTTGCTGA+AGG | 0.556540 | 8_3:-60102653 | None:intergenic |
| ATAGTCATAGGTGCTCTTCG+TGG | 0.558858 | 8_3:+60106970 | Msa1299110:CDS |
| CAGAGTTGTGAGGCATGTGA+AGG | 0.571298 | 8_3:-60102776 | None:intergenic |
| CCAACACAGAAGTCACATCA+TGG | 0.577575 | 8_3:+60102860 | Msa1299110:intron |
| CTTGTCTGAATGAACTACAA+TGG | 0.582865 | 8_3:-60102962 | None:intergenic |
| TTGATACTTTGGAGAAACAC+AGG | 0.587467 | 8_3:+60106842 | Msa1299110:CDS |
| GGTGAGAATGAATATGGGAA+AGG | 0.601558 | 8_3:-60102885 | None:intergenic |
| TTGAGGGTGAGAATGAATAT+GGG | 0.604046 | 8_3:-60102890 | None:intergenic |
| TGTGGGTTTGAGTTGAGAGA+AGG | 0.611992 | 8_3:-60102736 | None:intergenic |
| TGTTGGATGAACCAGTGTAA+AGG | 0.614019 | 8_3:-60102843 | None:intergenic |
| TTAGTGTTAATTGATTGTTG+AGG | 0.615795 | 8_3:-60102907 | None:intergenic |
| TTTGGTGTGCAGTGGTTCTG+AGG | 0.623985 | 8_3:+60107032 | Msa1299110:CDS |
| AATGATGGATATGTTTACAC+CGG | 0.626851 | 8_3:+60106757 | Msa1299110:CDS |
| AAGACAATTCGGATTTGGCG+AGG | 0.637548 | 8_3:+60107057 | Msa1299110:CDS |
| GTTTCCGATTTGGTGTGCAG+TGG | 0.647994 | 8_3:+60107024 | Msa1299110:CDS |
| TGTAGAATTTCAGAGTTGTG+AGG | 0.653037 | 8_3:-60102786 | None:intergenic |
| GGGACAGAACAATCAAGGTG+TGG | 0.682593 | 8_3:+60106659 | Msa1299110:intron |
| TTGTGAAGAAAGAGTACGTG+TGG | 0.685509 | 8_3:-60102695 | None:intergenic |
| TGAGAGAAGGAACTGATGCG+AGG | 0.688278 | 8_3:-60102723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGATATTAAAATAATT+TGG | + | chr8_3:60104507-60104526 | Msa1299110:intron | 10.0% |
| !! | TCATGATATTAAAATAATTT+GGG | + | chr8_3:60104508-60104527 | Msa1299110:intron | 10.0% |
| !!! | ATAGAAAATATTAATGATTT+TGG | + | chr8_3:60104578-60104597 | Msa1299110:intron | 10.0% |
| !!! | TTAAAATATTTTTATAGCAA+AGG | + | chr8_3:60104914-60104933 | Msa1299110:intron | 10.0% |
| !! | ATATATGTTATGGAAATTTA+TGG | + | chr8_3:60104015-60104034 | Msa1299110:intron | 15.0% |
| !! | AACACTAAATATATCATAAT+AGG | - | chr8_3:60104191-60104210 | None:intergenic | 15.0% |
| !! | AATATGTTAGATTTAACATA+TGG | + | chr8_3:60104245-60104264 | Msa1299110:intron | 15.0% |
| !!! | GTGTTATATTTAATTTTATG+TGG | + | chr8_3:60104733-60104752 | Msa1299110:intron | 15.0% |
| !! | ATCAACAGATAAAAAAATTA+AGG | + | chr8_3:60106780-60106799 | Msa1299110:CDS | 15.0% |
| !! | AAGAATTATGAAATTGTTGT+GGG | - | chr8_3:60102756-60102775 | None:intergenic | 20.0% |
| !!! | TTAAAGTGATTCCATTATTT+TGG | - | chr8_3:60103144-60103163 | None:intergenic | 20.0% |
| !! | ATGTATATGATTATAACCTT+TGG | + | chr8_3:60103253-60103272 | Msa1299110:intron | 20.0% |
| !!! | TTTGATTTGAAACAATGTTA+TGG | - | chr8_3:60103357-60103376 | None:intergenic | 20.0% |
| !! | ATAACATTGTTTCAAATCAA+AGG | + | chr8_3:60103356-60103375 | Msa1299110:intron | 20.0% |
| !! | TAACATTGTTTCAAATCAAA+GGG | + | chr8_3:60103357-60103376 | Msa1299110:intron | 20.0% |
| !!! | AACAGTATTTTACAGATTTA+TGG | - | chr8_3:60103556-60103575 | None:intergenic | 20.0% |
| !! | TAAATCTGTAAAATACTGTT+AGG | + | chr8_3:60103556-60103575 | Msa1299110:intron | 20.0% |
| !! | TATGATTTACTTGTGATTAA+TGG | + | chr8_3:60103915-60103934 | Msa1299110:intron | 20.0% |
| !! | CCATAACATATATTCATAAA+TGG | - | chr8_3:60104008-60104027 | None:intergenic | 20.0% |
| !! | CCATTTATGAATATATGTTA+TGG | + | chr8_3:60104005-60104024 | Msa1299110:intron | 20.0% |
| !! | GTTTATGTTAAATTTACATG+TGG | + | chr8_3:60104060-60104079 | Msa1299110:intron | 20.0% |
| !! | TAAATTGTCAAAATATCAAG+TGG | + | chr8_3:60104377-60104396 | Msa1299110:intron | 20.0% |
| !! | CATGATAATATGAAAAGTAA+TGG | + | chr8_3:60104470-60104489 | Msa1299110:intron | 20.0% |
| !!! | TAATCTCATTTTATGAAGTT+TGG | + | chr8_3:60104775-60104794 | Msa1299110:intron | 20.0% |
| !! | ATTCAATGTATGATATATCT+TGG | + | chr8_3:60104849-60104868 | Msa1299110:intron | 20.0% |
| !! | TATAAAAGAAAAGTTGAAGT+TGG | + | chr8_3:60104877-60104896 | Msa1299110:intron | 20.0% |
| !! | AATACATTGAAGACATTATT+AGG | + | chr8_3:60105175-60105194 | Msa1299110:intron | 20.0% |
| !! | ATACATTGAAGACATTATTA+GGG | + | chr8_3:60105176-60105195 | Msa1299110:intron | 20.0% |
| !! | AAACTTAACTTACTAAGTAA+TGG | + | chr8_3:60105670-60105689 | Msa1299110:intron | 20.0% |
| !! | AATACTAAATCACATAAATC+CGG | - | chr8_3:60105736-60105755 | None:intergenic | 20.0% |
| !!! | GTGATTTAGTATTTTGAAAA+TGG | + | chr8_3:60105743-60105762 | Msa1299110:intron | 20.0% |
| !!! | ATTTAGTATTTTGAAAATGG+TGG | + | chr8_3:60105746-60105765 | Msa1299110:intron | 20.0% |
| !!! | TTTAGTATTTTGAAAATGGT+GGG | + | chr8_3:60105747-60105766 | Msa1299110:intron | 20.0% |
| !!! | TTAAAGTGATTCCATTATTT+TGG | - | chr8_3:60103144-60103163 | None:intergenic | 20.0% |
| !! | ATGTATATGATTATAACCTT+TGG | + | chr8_3:60103253-60103272 | Msa1299110:intron | 20.0% |
| !!! | TTTGATTTGAAACAATGTTA+TGG | - | chr8_3:60103357-60103376 | None:intergenic | 20.0% |
| !! | ATAACATTGTTTCAAATCAA+AGG | + | chr8_3:60103356-60103375 | Msa1299110:intron | 20.0% |
| !! | TAACATTGTTTCAAATCAAA+GGG | + | chr8_3:60103357-60103376 | Msa1299110:intron | 20.0% |
| !!! | AACAGTATTTTACAGATTTA+TGG | - | chr8_3:60103556-60103575 | None:intergenic | 20.0% |
| !! | TAAATCTGTAAAATACTGTT+AGG | + | chr8_3:60103556-60103575 | Msa1299110:intron | 20.0% |
| !!! | AATATTAACATGGTTTTTGT+TGG | - | chr8_3:60106545-60106564 | None:intergenic | 20.0% |
| !! | AAAACCATGTTAATATTAGA+AGG | + | chr8_3:60106548-60106567 | Msa1299110:intron | 20.0% |
| !!! | AATTTTTTTATCTGTTGATC+CGG | - | chr8_3:60106779-60106798 | None:intergenic | 20.0% |
| !! | CAGATAAAAAAATTAAGGTT+TGG | + | chr8_3:60106785-60106804 | Msa1299110:CDS | 20.0% |
| !!! | GTGTGGTAATTAACTTTTTT+TGG | - | chr8_3:60102681-60102700 | None:intergenic | 25.0% |
| ! | GAAGAATTATGAAATTGTTG+TGG | - | chr8_3:60102757-60102776 | None:intergenic | 25.0% |
| ! | TAGTGTTAATTGATTGTTGA+GGG | - | chr8_3:60102909-60102928 | None:intergenic | 25.0% |
| ! | TTAGTGTTAATTGATTGTTG+AGG | - | chr8_3:60102910-60102929 | None:intergenic | 25.0% |
| ! | ATGATTATAACCTTTGACAA+AGG | + | chr8_3:60103318-60103337 | Msa1299110:intron | 25.0% |
| ! | TGATTATAACCTTTGACAAA+GGG | + | chr8_3:60103319-60103338 | Msa1299110:intron | 25.0% |
| ! | AACATTGTTTCAAATCAAAG+GGG | + | chr8_3:60103358-60103377 | Msa1299110:intron | 25.0% |
| ! | ACTATAAATGCTTGACATTT+GGG | + | chr8_3:60103413-60103432 | Msa1299110:intron | 25.0% |
| !! | GCATAAGTATTAAACTTTTC+AGG | + | chr8_3:60103739-60103758 | Msa1299110:intron | 25.0% |
| ! | TCAAGATATACAACAATCTT+CGG | + | chr8_3:60103791-60103810 | Msa1299110:intron | 25.0% |
| !!! | TGTAAGTTGATATATGTTCA+TGG | + | chr8_3:60104546-60104565 | Msa1299110:intron | 25.0% |
| ! | TTTATGTGGAGTATATAACT+TGG | + | chr8_3:60104747-60104766 | Msa1299110:intron | 25.0% |
| !! | ATTGGTGATCAATTAGATTT+GGG | - | chr8_3:60105214-60105233 | None:intergenic | 25.0% |
| ! | ACTCTTAAATTCTCATGAAA+AGG | + | chr8_3:60105502-60105521 | Msa1299110:intron | 25.0% |
| ! | CTCTTAAATTCTCATGAAAA+GGG | + | chr8_3:60105503-60105522 | Msa1299110:intron | 25.0% |
| ! | ATAACTTACACATAGAATCT+CGG | - | chr8_3:60105586-60105605 | None:intergenic | 25.0% |
| !!! | TTAGTATTTTGAAAATGGTG+GGG | + | chr8_3:60105748-60105767 | Msa1299110:intron | 25.0% |
| ! | ATGATTATAACCTTTGACAA+AGG | + | chr8_3:60103318-60103337 | Msa1299110:intron | 25.0% |
| ! | TGATTATAACCTTTGACAAA+GGG | + | chr8_3:60103319-60103338 | Msa1299110:intron | 25.0% |
| ! | AACATTGTTTCAAATCAAAG+GGG | + | chr8_3:60103358-60103377 | Msa1299110:intron | 25.0% |
| ! | TATAATGCACTATAAATGCT+TGG | + | chr8_3:60103405-60103424 | Msa1299110:intron | 25.0% |
| !! | GCATAAGTATTAAACTTTTC+AGG | + | chr8_3:60103739-60103758 | Msa1299110:intron | 25.0% |
| ! | TCAAGATATACAACAATCTT+CGG | + | chr8_3:60103791-60103810 | Msa1299110:intron | 25.0% |
| !! | CTTGTTATATTCTGTTTCTT+GGG | + | chr8_3:60106639-60106658 | Msa1299110:intron | 25.0% |
| ! | AAGGTTTGGAAGAAAAATAA+AGG | + | chr8_3:60106799-60106818 | Msa1299110:CDS | 25.0% |
| !! | ACATTTGTTAGTTGATACTT+TGG | + | chr8_3:60106831-60106850 | Msa1299110:CDS | 25.0% |
| ! | TCAATATTGGTATCTGAAAA+AGG | + | chr8_3:60106931-60106950 | Msa1299110:CDS | 25.0% |
| !! | AATGGTAATTTGATAGTCAT+AGG | + | chr8_3:60106958-60106977 | Msa1299110:CDS | 25.0% |
| ! | ATAAAAAAAGATGCTTCAGA+CGG | - | chr8_3:60107186-60107205 | None:intergenic | 25.0% |
| ATATCCTCTTTAACACTTGT+AGG | + | chr8_3:60102814-60102833 | Msa1299110:CDS | 30.0% | |
| ! | TTTTCCTACAAGTGTTAAAG+AGG | - | chr8_3:60102821-60102840 | None:intergenic | 30.0% |
| AACACTAACACAATAGTATC+TGG | + | chr8_3:60102922-60102941 | Msa1299110:CDS | 30.0% | |
| AACACAATAGTATCTGGAAA+TGG | + | chr8_3:60102928-60102947 | Msa1299110:CDS | 30.0% | |
| TTGAGATTCGTTGTTGATAT+TGG | - | chr8_3:60103034-60103053 | None:intergenic | 30.0% | |
| !! | GTTGGTGATTTCCAAAATAA+TGG | + | chr8_3:60103130-60103149 | Msa1299110:intron | 30.0% |
| TCAAAAGTTGTAACTCTTCA+TGG | + | chr8_3:60103165-60103184 | Msa1299110:intron | 30.0% | |
| CAAAAGTTGTAACTCTTCAT+GGG | + | chr8_3:60103166-60103185 | Msa1299110:intron | 30.0% | |
| TGGGAATCATTCATATACAT+TGG | + | chr8_3:60103185-60103204 | Msa1299110:intron | 30.0% | |
| TGATTATAACCTTTGGCAAA+AGG | + | chr8_3:60103260-60103279 | Msa1299110:intron | 30.0% | |
| GATTATAACCTTTGGCAAAA+GGG | + | chr8_3:60103261-60103280 | Msa1299110:intron | 30.0% | |
| ATACACTTGAATCAATGCAA+AGG | - | chr8_3:60103298-60103317 | None:intergenic | 30.0% | |
| ATTAAACATCCCTTTGTCAA+AGG | - | chr8_3:60103331-60103350 | None:intergenic | 30.0% | |
| CACTATAAATGCTTGACATT+TGG | + | chr8_3:60103412-60103431 | Msa1299110:intron | 30.0% | |
| GAACAACAACACACAAAAAA+AGG | + | chr8_3:60103456-60103475 | Msa1299110:intron | 30.0% | |
| ! | GATTTAGAGTAAGAGAATGA+TGG | - | chr8_3:60103499-60103518 | None:intergenic | 30.0% |
| ACTGTATATTGGATGCAATA+AGG | - | chr8_3:60103655-60103674 | None:intergenic | 30.0% | |
| TGCATCCAATATACAGTTAT+TGG | + | chr8_3:60103658-60103677 | Msa1299110:intron | 30.0% | |
| ATCCAATATACAGTTATTGG+TGG | + | chr8_3:60103661-60103680 | Msa1299110:intron | 30.0% | |
| TCCAATATACAGTTATTGGT+GGG | + | chr8_3:60103662-60103681 | Msa1299110:intron | 30.0% | |
| ATATCTTGATTGTTGAGAAG+AGG | - | chr8_3:60103780-60103799 | None:intergenic | 30.0% | |
| AAATCGAACCTAAAGATTGT+TGG | - | chr8_3:60103896-60103915 | None:intergenic | 30.0% | |
| ! | TGATTAATGGCTGCAATTTT+TGG | + | chr8_3:60103928-60103947 | Msa1299110:intron | 30.0% |
| ! | GATTAATGGCTGCAATTTTT+GGG | + | chr8_3:60103929-60103948 | Msa1299110:intron | 30.0% |
| TACATATTCATCCATGACTA+CGG | + | chr8_3:60103965-60103984 | Msa1299110:intron | 30.0% | |
| GTTAAATTTACATGTGGTTG+TGG | + | chr8_3:60104066-60104085 | Msa1299110:intron | 30.0% | |
| ! | TGTCATGGTTTGATGATAAT+TGG | + | chr8_3:60104989-60105008 | Msa1299110:intron | 30.0% |
| TATTCTCATAGCTATGTCTA+TGG | - | chr8_3:60105044-60105063 | None:intergenic | 30.0% | |
| ATTTGACGAAATGATTGACA+AGG | + | chr8_3:60105127-60105146 | Msa1299110:intron | 30.0% | |
| ! | CATTGGTGATCAATTAGATT+TGG | - | chr8_3:60105215-60105234 | None:intergenic | 30.0% |
| CAAATCTAATTGATCACCAA+TGG | + | chr8_3:60105213-60105232 | Msa1299110:intron | 30.0% | |
| TTGGACCATAAGAAGAAAAA+GGG | + | chr8_3:60105350-60105369 | Msa1299110:intron | 30.0% | |
| TATGCTATATGTCCATTAAG+AGG | - | chr8_3:60105390-60105409 | None:intergenic | 30.0% | |
| GACATATAGCATATATTTGC+TGG | + | chr8_3:60105397-60105416 | Msa1299110:intron | 30.0% | |
| TGTAAGATGACACATTAAGA+AGG | - | chr8_3:60105544-60105563 | None:intergenic | 30.0% | |
| CTTACAAGTCTCTTTATCAA+TGG | + | chr8_3:60105558-60105577 | Msa1299110:intron | 30.0% | |
| CACTTGTTCTAATGAATAGT+TGG | + | chr8_3:60105609-60105628 | Msa1299110:intron | 30.0% | |
| !! | TAGTATTTTGAAAATGGTGG+GGG | + | chr8_3:60105749-60105768 | Msa1299110:intron | 30.0% |
| !! | GTTGGTGATTTCCAAAATAA+TGG | + | chr8_3:60103130-60103149 | Msa1299110:intron | 30.0% |
| TCAAAAGTTGTAACTCTTCA+TGG | + | chr8_3:60103165-60103184 | Msa1299110:intron | 30.0% | |
| CAAAAGTTGTAACTCTTCAT+GGG | + | chr8_3:60103166-60103185 | Msa1299110:intron | 30.0% | |
| TGGGAATCATTCATATACAT+TGG | + | chr8_3:60103185-60103204 | Msa1299110:intron | 30.0% | |
| TGATTATAACCTTTGGCAAA+AGG | + | chr8_3:60103260-60103279 | Msa1299110:intron | 30.0% | |
| GATTATAACCTTTGGCAAAA+GGG | + | chr8_3:60103261-60103280 | Msa1299110:intron | 30.0% | |
| ATACACTTGAATCAATGCAA+AGG | - | chr8_3:60103298-60103317 | None:intergenic | 30.0% | |
| ATTAAACATCCCTTTGTCAA+AGG | - | chr8_3:60103331-60103350 | None:intergenic | 30.0% | |
| ACTATAAATGCTTGGCATTT+GGG | + | chr8_3:60106058-60106077 | Msa1299110:intron | 30.0% | |
| ! | GATTTAGAGTAAGAGAATGA+TGG | - | chr8_3:60103499-60103518 | None:intergenic | 30.0% |
| ACTGTATATTGGATGCAATA+AGG | - | chr8_3:60103655-60103674 | None:intergenic | 30.0% | |
| TGCATCCAATATACAGTTAT+TGG | + | chr8_3:60103658-60103677 | Msa1299110:intron | 30.0% | |
| ATCCAATATACAGTTATTGG+TGG | + | chr8_3:60103661-60103680 | Msa1299110:intron | 30.0% | |
| TCCAATATACAGTTATTGGT+GGG | + | chr8_3:60103662-60103681 | Msa1299110:intron | 30.0% | |
| ATATCTTGATTGTTGAGAAG+AGG | - | chr8_3:60103780-60103799 | None:intergenic | 30.0% | |
| ! | TTTTTGTTGGAACTTGTGTT+GGG | - | chr8_3:60106532-60106551 | None:intergenic | 30.0% |
| TGTGCCTTCTAATATTAACA+TGG | - | chr8_3:60106555-60106574 | None:intergenic | 30.0% | |
| CCAAGAAACAGAATATAACA+AGG | - | chr8_3:60106641-60106660 | None:intergenic | 30.0% | |
| ! | CCTTGTTATATTCTGTTTCT+TGG | + | chr8_3:60106638-60106657 | Msa1299110:intron | 30.0% |
| !! | AATGATGGATATGTTTACAC+CGG | + | chr8_3:60106757-60106776 | Msa1299110:CDS | 30.0% |
| TGCATGTGATAGATCAATAT+TGG | + | chr8_3:60106918-60106937 | Msa1299110:CDS | 30.0% | |
| GTATCTGAAAAAGGTGAAAA+TGG | + | chr8_3:60106940-60106959 | Msa1299110:CDS | 30.0% | |
| CACAAAGTCTATATTGTGTT+TGG | + | chr8_3:60106996-60107015 | Msa1299110:CDS | 30.0% | |
| !!! | GTATTGTTGTTTGAGTGTTT+TGG | + | chr8_3:60107104-60107123 | Msa1299110:CDS | 30.0% |
| ACAATAGTTAGGCACTTAAT+TGG | - | chr8_3:60107144-60107163 | None:intergenic | 30.0% | |
| !!! | GCATCTTTTTTTATCTACAG+TGG | + | chr8_3:60107192-60107211 | Msa1299110:CDS | 30.0% |
| ! | TTTTATCTACAGTGGAAGTT+TGG | + | chr8_3:60107200-60107219 | Msa1299110:CDS | 30.0% |
| AAGTTTGGACTGTGATATTA+AGG | + | chr8_3:60107215-60107234 | Msa1299110:CDS | 30.0% | |
| TGTAGAATTTCAGAGTTGTG+AGG | - | chr8_3:60102789-60102808 | None:intergenic | 35.0% | |
| GTAGGAAAATTCCTTTACAC+TGG | + | chr8_3:60102832-60102851 | Msa1299110:CDS | 35.0% | |
| TTGAGGGTGAGAATGAATAT+GGG | - | chr8_3:60102893-60102912 | None:intergenic | 35.0% | |
| CTTGTCTGAATGAACTACAA+TGG | - | chr8_3:60102965-60102984 | None:intergenic | 35.0% | |
| !! | AAACGCGGATTTTGTTATCT+TGG | - | chr8_3:60103002-60103021 | None:intergenic | 35.0% |
| AAGATAACAAAATCCGCGTT+TGG | + | chr8_3:60103001-60103020 | Msa1299110:CDS | 35.0% | |
| !! | TATTGGTGATTTTCCAAACG+CGG | - | chr8_3:60103017-60103036 | None:intergenic | 35.0% |
| TGAAACGGTCTATGAATGTT+GGG | - | chr8_3:60103086-60103105 | None:intergenic | 35.0% | |
| ! | GAAATCACCAACAGTTTTTC+GGG | - | chr8_3:60103122-60103141 | None:intergenic | 35.0% |
| ! | GGAAATCACCAACAGTTTTT+CGG | - | chr8_3:60103123-60103142 | None:intergenic | 35.0% |
| ! | GGTGTTTTCTCTCATATGAA+GGG | + | chr8_3:60103379-60103398 | Msa1299110:intron | 35.0% |
| TTCACTCATGCATTAGAGAA+TGG | - | chr8_3:60103524-60103543 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+GGG | + | chr8_3:60103663-60103682 | Msa1299110:intron | 35.0% | |
| CAATATACAGTTATTGGTGG+GGG | + | chr8_3:60103664-60103683 | Msa1299110:intron | 35.0% | |
| ATCGAACCTAAAGGTTAGTA+TGG | + | chr8_3:60103690-60103709 | Msa1299110:intron | 35.0% | |
| ATGTAAACTCAAAGCGTATG+GGG | - | chr8_3:60103719-60103738 | None:intergenic | 35.0% | |
| CATGTAAACTCAAAGCGTAT+GGG | - | chr8_3:60103720-60103739 | None:intergenic | 35.0% | |
| ATTCATCTTCGTCATCTTCT+TGG | + | chr8_3:60103837-60103856 | Msa1299110:intron | 35.0% | |
| AGATTGTTGGAACTTGTGTT+GGG | - | chr8_3:60103883-60103902 | None:intergenic | 35.0% | |
| AAGATTGTTGGAACTTGTGT+TGG | - | chr8_3:60103884-60103903 | None:intergenic | 35.0% | |
| CACAAGTTCCAACAATCTTT+AGG | + | chr8_3:60103885-60103904 | Msa1299110:intron | 35.0% | |
| !! | CTCAATTGACAAAAGTGTCA+TGG | + | chr8_3:60104974-60104993 | Msa1299110:intron | 35.0% |
| TTGACAAGGAATGATGTCTT+TGG | + | chr8_3:60105141-60105160 | Msa1299110:intron | 35.0% | |
| TGAAGACATTATTAGGGATG+TGG | + | chr8_3:60105182-60105201 | Msa1299110:intron | 35.0% | |
| ATCTAATTGATCACCAATGG+TGG | + | chr8_3:60105216-60105235 | Msa1299110:intron | 35.0% | |
| TGACAATAGATAACATCCCA+AGG | + | chr8_3:60105316-60105335 | Msa1299110:intron | 35.0% | |
| GACAATAGATAACATCCCAA+GGG | + | chr8_3:60105317-60105336 | Msa1299110:intron | 35.0% | |
| ACAATAGATAACATCCCAAG+GGG | + | chr8_3:60105318-60105337 | Msa1299110:intron | 35.0% | |
| CTTGGACCATAAGAAGAAAA+AGG | + | chr8_3:60105349-60105368 | Msa1299110:intron | 35.0% | |
| ACCATAAGAAGAAAAAGGGT+AGG | + | chr8_3:60105354-60105373 | Msa1299110:intron | 35.0% | |
| ! | TCCTACCCTTTTTCTTCTTA+TGG | - | chr8_3:60105358-60105377 | None:intergenic | 35.0% |
| TTTGCTGGAATGCATACTTA+TGG | + | chr8_3:60105412-60105431 | Msa1299110:intron | 35.0% | |
| TTGCTGGAATGCATACTTAT+GGG | + | chr8_3:60105413-60105432 | Msa1299110:intron | 35.0% | |
| CTCACATAGGTAGACTATAT+CGG | - | chr8_3:60105445-60105464 | None:intergenic | 35.0% | |
| ACCTATGTGAGAATGAAGTT+TGG | + | chr8_3:60105454-60105473 | Msa1299110:intron | 35.0% | |
| GAAAAGGGATATATGACACA+AGG | + | chr8_3:60105518-60105537 | Msa1299110:intron | 35.0% | |
| TCATTCCCAAATAGTATGGT+AGG | - | chr8_3:60105646-60105665 | None:intergenic | 35.0% | |
| AATTCCATGCCTTCAGATAA+TGG | - | chr8_3:60105712-60105731 | None:intergenic | 35.0% | |
| ! | GGTGTTTTCTCTCATATGAA+GGG | + | chr8_3:60103379-60103398 | Msa1299110:intron | 35.0% |
| CACTATAAATGCTTGGCATT+TGG | + | chr8_3:60106057-60106076 | Msa1299110:intron | 35.0% | |
| CTCATGCATTAGAGAATTGA+TGG | - | chr8_3:60106169-60106188 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+GGG | + | chr8_3:60103663-60103682 | Msa1299110:intron | 35.0% | |
| CAATATACAGTTATTGGTGG+GGG | + | chr8_3:60103664-60103683 | Msa1299110:intron | 35.0% | |
| ATCGAACCTAAAGGTTAGTA+TGG | + | chr8_3:60103690-60103709 | Msa1299110:intron | 35.0% | |
| ATGTAAACTCAAAGCGTATG+GGG | - | chr8_3:60103719-60103738 | None:intergenic | 35.0% | |
| CATGTAAACTCAAAGCGTAT+GGG | - | chr8_3:60103720-60103739 | None:intergenic | 35.0% | |
| ATTCATCTTCGTCATCTTCT+TGG | + | chr8_3:60103837-60103856 | Msa1299110:intron | 35.0% | |
| ! | TTTTGTTGGAACTTGTGTTG+GGG | - | chr8_3:60106531-60106550 | None:intergenic | 35.0% |
| ! | GTTTTTGTTGGAACTTGTGT+TGG | - | chr8_3:60106533-60106552 | None:intergenic | 35.0% |
| AAGGCACAAAAAATGCACAT+GGG | + | chr8_3:60106567-60106586 | Msa1299110:intron | 35.0% | |
| TCTCTTGCCTTATCTAAAGA+TGG | + | chr8_3:60106613-60106632 | Msa1299110:intron | 35.0% | |
| CAAGGTTCCATCTTTAGATA+AGG | - | chr8_3:60106623-60106642 | None:intergenic | 35.0% | |
| GCAATCACAGTTTCTAATGA+TGG | + | chr8_3:60106742-60106761 | Msa1299110:CDS | 35.0% | |
| ! | TTGATACTTTGGAGAAACAC+AGG | + | chr8_3:60106842-60106861 | Msa1299110:CDS | 35.0% |
| !! | GATGGTTCTGTTTTGTATTC+TGG | + | chr8_3:60106895-60106914 | Msa1299110:CDS | 35.0% |
| !! | GTTCTGAGGATAAGACAATT+CGG | + | chr8_3:60107046-60107065 | Msa1299110:CDS | 35.0% |
| AGGATAAGACAATTCGGATT+TGG | + | chr8_3:60107052-60107071 | Msa1299110:CDS | 35.0% | |
| !! | TGTTGTTTGAGTGTTTTGGA+AGG | + | chr8_3:60107108-60107127 | Msa1299110:CDS | 35.0% |
| !!! | GTTGTTTGAGTGTTTTGGAA+GGG | + | chr8_3:60107109-60107128 | Msa1299110:CDS | 35.0% |
| AGTGATCAAGCACAATAGTT+AGG | - | chr8_3:60107155-60107174 | None:intergenic | 35.0% | |
| TGGACTGTGATATTAAGGTT+TGG | + | chr8_3:60107220-60107239 | Msa1299110:CDS | 35.0% | |
| GTTATTAGAGTCGTTGCTGA+AGG | - | chr8_3:60102656-60102675 | None:intergenic | 40.0% | |
| ! | TTGTGAAGAAAGAGTACGTG+TGG | - | chr8_3:60102698-60102717 | None:intergenic | 40.0% |
| TGTTGGATGAACCAGTGTAA+AGG | - | chr8_3:60102846-60102865 | None:intergenic | 40.0% | |
| GGTGAGAATGAATATGGGAA+AGG | - | chr8_3:60102888-60102907 | None:intergenic | 40.0% | |
| GTTGAGGGTGAGAATGAATA+TGG | - | chr8_3:60102894-60102913 | None:intergenic | 40.0% | |
| GTGAAACGGTCTATGAATGT+TGG | - | chr8_3:60103087-60103106 | None:intergenic | 40.0% | |
| ! | GGATGAGGATTTTCGTGAAA+CGG | - | chr8_3:60103101-60103120 | None:intergenic | 40.0% |
| ! | ATTAAGCACCCTTTTGCCAA+AGG | - | chr8_3:60103272-60103291 | None:intergenic | 40.0% |
| ! | GGGTGTTTTCTCTCATATGA+AGG | + | chr8_3:60103378-60103397 | Msa1299110:intron | 40.0% |
| CTTGACATTTGGGCATTAGT+TGG | + | chr8_3:60103423-60103442 | Msa1299110:intron | 40.0% | |
| CTAATGCATGAGTGAATTGC+TGG | + | chr8_3:60103528-60103547 | Msa1299110:intron | 40.0% | |
| ATACTGTTAGGAGATACGCT+TGG | + | chr8_3:60103568-60103587 | Msa1299110:intron | 40.0% | |
| AGGAACTCATAGTATCCTGA+AGG | + | chr8_3:60103613-60103632 | Msa1299110:intron | 40.0% | |
| GGAACTCATAGTATCCTGAA+GGG | + | chr8_3:60103614-60103633 | Msa1299110:intron | 40.0% | |
| GAACTCATAGTATCCTGAAG+GGG | + | chr8_3:60103615-60103634 | Msa1299110:intron | 40.0% | |
| TGGATGCAATAAGGAATGAC+CGG | - | chr8_3:60103646-60103665 | None:intergenic | 40.0% | |
| CCCCACCAATAACTGTATAT+TGG | - | chr8_3:60103666-60103685 | None:intergenic | 40.0% | |
| GCATGTAAACTCAAAGCGTA+TGG | - | chr8_3:60103721-60103740 | None:intergenic | 40.0% | |
| ATTGTTGGAACTTGTGTTGG+GGG | - | chr8_3:60103881-60103900 | None:intergenic | 40.0% | |
| GATTGTTGGAACTTGTGTTG+GGG | - | chr8_3:60103882-60103901 | None:intergenic | 40.0% | |
| ACTTGATGCTACTCAAGTGT+GGG | - | chr8_3:60105250-60105269 | None:intergenic | 40.0% | |
| ACTTGAGTAGCATCAAGTCT+TGG | + | chr8_3:60105252-60105271 | Msa1299110:intron | 40.0% | |
| CTTGAGTAGCATCAAGTCTT+GGG | + | chr8_3:60105253-60105272 | Msa1299110:intron | 40.0% | |
| ! | TCCAAGTACTTTTACCCCTT+GGG | - | chr8_3:60105335-60105354 | None:intergenic | 40.0% |
| AGAAGAAAAAGGGTAGGATG+AGG | + | chr8_3:60105360-60105379 | Msa1299110:intron | 40.0% | |
| ! | GGATGAGGTTTTCCTCTTAA+TGG | + | chr8_3:60105375-60105394 | Msa1299110:intron | 40.0% |
| TGCTGGAATGCATACTTATG+GGG | + | chr8_3:60105414-60105433 | Msa1299110:intron | 40.0% | |
| GCCAAACTTCATTCTCACAT+AGG | - | chr8_3:60105458-60105477 | None:intergenic | 40.0% | |
| AGCTTGCCTACCATACTATT+TGG | + | chr8_3:60105637-60105656 | Msa1299110:intron | 40.0% | |
| GCTTGCCTACCATACTATTT+GGG | + | chr8_3:60105638-60105657 | Msa1299110:intron | 40.0% | |
| TCGCTCATTCCCAAATAGTA+TGG | - | chr8_3:60105650-60105669 | None:intergenic | 40.0% | |
| GATACCATTATCTGAAGGCA+TGG | + | chr8_3:60105705-60105724 | Msa1299110:intron | 40.0% | |
| ! | ATCTGAAGGCATGGAATTTC+CGG | + | chr8_3:60105714-60105733 | Msa1299110:intron | 40.0% |
| ! | ATTAAGCACCCTTTTGCCAA+AGG | - | chr8_3:60103272-60103291 | None:intergenic | 40.0% |
| ! | GGGTGTTTTCTCTCATATGA+AGG | + | chr8_3:60103378-60103397 | Msa1299110:intron | 40.0% |
| CTAATGCATGAGTGAATTGC+TGG | + | chr8_3:60103528-60103547 | Msa1299110:intron | 40.0% | |
| ATACTGTTAGGAGATACGCT+TGG | + | chr8_3:60103568-60103587 | Msa1299110:intron | 40.0% | |
| AGGAACTCATAGTATCCTGA+AGG | + | chr8_3:60103613-60103632 | Msa1299110:intron | 40.0% | |
| GGAACTCATAGTATCCTGAA+GGG | + | chr8_3:60103614-60103633 | Msa1299110:intron | 40.0% | |
| GAACTCATAGTATCCTGAAG+GGG | + | chr8_3:60103615-60103634 | Msa1299110:intron | 40.0% | |
| TGGATGCAATAAGGAATGAC+CGG | - | chr8_3:60103646-60103665 | None:intergenic | 40.0% | |
| CCCCACCAATAACTGTATAT+TGG | - | chr8_3:60103666-60103685 | None:intergenic | 40.0% | |
| GCATGTAAACTCAAAGCGTA+TGG | - | chr8_3:60103721-60103740 | None:intergenic | 40.0% | |
| TTTGTTGGAACTTGTGTTGG+GGG | - | chr8_3:60106530-60106549 | None:intergenic | 40.0% | |
| ! | GAAGGCACAAAAAATGCACA+TGG | + | chr8_3:60106566-60106585 | Msa1299110:intron | 40.0% |
| TTCTTGGGACAGAACAATCA+AGG | + | chr8_3:60106654-60106673 | Msa1299110:intron | 40.0% | |
| AACCAAAGACTTCACGTGTT+TGG | + | chr8_3:60106684-60106703 | Msa1299110:CDS | 40.0% | |
| TTCCAAACACGTGAAGTCTT+TGG | - | chr8_3:60106689-60106708 | None:intergenic | 40.0% | |
| ! | AGACTTCACGTGTTTGGAAT+CGG | + | chr8_3:60106690-60106709 | Msa1299110:CDS | 40.0% |
| GTCTATATTGTGTTTGGCTG+TGG | + | chr8_3:60107002-60107021 | Msa1299110:CDS | 40.0% | |
| !!! | AGTGTTTTGGAAGGGCATAA+AGG | + | chr8_3:60107117-60107136 | Msa1299110:CDS | 40.0% |
| !! | TGTGGGTTTGAGTTGAGAGA+AGG | - | chr8_3:60102739-60102758 | None:intergenic | 45.0% |
| CCATGATGTGACTTCTGTGT+TGG | - | chr8_3:60102863-60102882 | None:intergenic | 45.0% | |
| CCAACACAGAAGTCACATCA+TGG | + | chr8_3:60102860-60102879 | Msa1299110:intron | 45.0% | |
| ! | TGTTGGGAGTGTGGCTAAAT+GGG | - | chr8_3:60103070-60103089 | None:intergenic | 45.0% |
| ! | ATGTTGGGAGTGTGGCTAAA+TGG | - | chr8_3:60103071-60103090 | None:intergenic | 45.0% |
| GTCTATGAATGTTGGGAGTG+TGG | - | chr8_3:60103079-60103098 | None:intergenic | 45.0% | |
| TCCTCATCCCGAAAAACTGT+TGG | + | chr8_3:60103112-60103131 | Msa1299110:intron | 45.0% | |
| !!! | ACCAACAGTTTTTCGGGATG+AGG | - | chr8_3:60103116-60103135 | None:intergenic | 45.0% |
| TGGTTGTGCAATACACGTCA+AGG | + | chr8_3:60103593-60103612 | Msa1299110:intron | 45.0% | |
| GGGTTGCCATACTAACCTTT+AGG | - | chr8_3:60103699-60103718 | None:intergenic | 45.0% | |
| TCATCCATGACTACGGTGAA+CGG | + | chr8_3:60103972-60103991 | Msa1299110:intron | 45.0% | |
| TTTACCGTTCACCGTAGTCA+TGG | - | chr8_3:60103979-60103998 | None:intergenic | 45.0% | |
| GACTTGATGCTACTCAAGTG+TGG | - | chr8_3:60105251-60105270 | None:intergenic | 45.0% | |
| GCATCAAGTCTTGGGTTCAA+TGG | + | chr8_3:60105261-60105280 | Msa1299110:intron | 45.0% | |
| !! | TCCCAAGGGGTAAAAGTACT+TGG | + | chr8_3:60105331-60105350 | Msa1299110:intron | 45.0% |
| ! | GTCCAAGTACTTTTACCCCT+TGG | - | chr8_3:60105336-60105355 | None:intergenic | 45.0% |
| AATGAAGTTTGGCCGCTTCA+CGG | + | chr8_3:60105465-60105484 | Msa1299110:intron | 45.0% | |
| CGCGAGATACCATTATCTGA+AGG | + | chr8_3:60105700-60105719 | Msa1299110:intron | 45.0% | |
| ! | TGAAAATGGTGGGGGATTGT+TGG | + | chr8_3:60105757-60105776 | Msa1299110:intron | 45.0% |
| CTTGGCATTTGGGCATTAGT+TGG | + | chr8_3:60106068-60106087 | Msa1299110:intron | 45.0% | |
| TGGTTGTGCAATACACGTCA+AGG | + | chr8_3:60103593-60103612 | Msa1299110:intron | 45.0% | |
| GGGTTGCCATACTAACCTTT+AGG | - | chr8_3:60103699-60103718 | None:intergenic | 45.0% | |
| GAGATGAGACTGTGTCAACA+TGG | - | chr8_3:60106597-60106616 | None:intergenic | 45.0% | |
| ! | ACTTTGGAGAAACACAGGTC+TGG | + | chr8_3:60106847-60106866 | Msa1299110:CDS | 45.0% |
| ! | CTTTGGAGAAACACAGGTCT+GGG | + | chr8_3:60106848-60106867 | Msa1299110:CDS | 45.0% |
| ! | CAGGTCTGGGATTAATGCAT+TGG | + | chr8_3:60106861-60106880 | Msa1299110:CDS | 45.0% |
| !! | GCATTGGCTCTTAACAGTGA+TGG | + | chr8_3:60106877-60106896 | Msa1299110:CDS | 45.0% |
| ATAGTCATAGGTGCTCTTCG+TGG | + | chr8_3:60106970-60106989 | Msa1299110:CDS | 45.0% | |
| TTTGGCTGTGGTTTCCGATT+TGG | + | chr8_3:60107014-60107033 | Msa1299110:CDS | 45.0% | |
| AGAACCACTGCACACCAAAT+CGG | - | chr8_3:60107031-60107050 | None:intergenic | 45.0% | |
| AAGACAATTCGGATTTGGCG+AGG | + | chr8_3:60107057-60107076 | Msa1299110:CDS | 45.0% | |
| TGAGAGAAGGAACTGATGCG+AGG | - | chr8_3:60102726-60102745 | None:intergenic | 50.0% | |
| CAGAGTTGTGAGGCATGTGA+AGG | - | chr8_3:60102779-60102798 | None:intergenic | 50.0% | |
| ! | GTTAGGAGATACGCTTGGTG+TGG | + | chr8_3:60103573-60103592 | Msa1299110:intron | 50.0% |
| ! | GTGGGTTGAGTTTCCACCAT+TGG | - | chr8_3:60105232-60105251 | None:intergenic | 50.0% |
| AACCCTTGAACTCCGTGAAG+CGG | - | chr8_3:60105480-60105499 | None:intergenic | 50.0% | |
| ! | GTTAGGAGATACGCTTGGTG+TGG | + | chr8_3:60103573-60103592 | Msa1299110:intron | 50.0% |
| GGGACAGAACAATCAAGGTG+TGG | + | chr8_3:60106659-60106678 | Msa1299110:intron | 50.0% | |
| !! | GTTTCCGATTTGGTGTGCAG+TGG | + | chr8_3:60107024-60107043 | Msa1299110:CDS | 50.0% |
| ! | TTTGGTGTGCAGTGGTTCTG+AGG | + | chr8_3:60107032-60107051 | Msa1299110:CDS | 50.0% |
| GTATCCTGAAGGGGATTCGC+CGG | + | chr8_3:60103624-60103643 | Msa1299110:intron | 55.0% | |
| TGGGGGCGAATCGAACCTAA+AGG | + | chr8_3:60103681-60103700 | Msa1299110:intron | 55.0% | |
| GTATCCTGAAGGGGATTCGC+CGG | + | chr8_3:60103624-60103643 | Msa1299110:intron | 55.0% | |
| TGGGGGCGAATCGAACCTAA+AGG | + | chr8_3:60103681-60103700 | Msa1299110:intron | 55.0% | |
| ATGACCGGCGAATCCCCTTC+AGG | - | chr8_3:60103631-60103650 | None:intergenic | 60.0% | |
| TGGCCGCTTCACGGAGTTCA+AGG | + | chr8_3:60105474-60105493 | Msa1299110:intron | 60.0% | |
| GGCCGCTTCACGGAGTTCAA+GGG | + | chr8_3:60105475-60105494 | Msa1299110:intron | 60.0% | |
| ATGACCGGCGAATCCCCTTC+AGG | - | chr8_3:60103631-60103650 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60102637 | 60107266 | 60102637 | ID=Msa1299110;Name=Msa1299110 |
| chr8_3 | mRNA | 60102637 | 60107266 | 60102637 | ID=Msa1299110-mRNA-1;Parent=Msa1299110;Name=Msa1299110-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0|0.33|3|0|336 |
| chr8_3 | exon | 60102637 | 60102853 | 60102637 | ID=Msa1299110-mRNA-1:exon:17471;Parent=Msa1299110-mRNA-1 |
| chr8_3 | exon | 60102869 | 60103061 | 60102869 | ID=Msa1299110-mRNA-1:exon:17472;Parent=Msa1299110-mRNA-1 |
| chr8_3 | exon | 60106666 | 60107266 | 60106666 | ID=Msa1299110-mRNA-1:exon:17473;Parent=Msa1299110-mRNA-1 |
| chr8_3 | CDS | 60102637 | 60102853 | 60102637 | ID=Msa1299110-mRNA-1:cds;Parent=Msa1299110-mRNA-1 |
| chr8_3 | CDS | 60102869 | 60103061 | 60102869 | ID=Msa1299110-mRNA-1:cds;Parent=Msa1299110-mRNA-1 |
| chr8_3 | CDS | 60106666 | 60107266 | 60106666 | ID=Msa1299110-mRNA-1:cds;Parent=Msa1299110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
