Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1136140 | XP_024625329.1 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1136140 | sp|F4J1Q9|AVT1I_ARATH | 58.354 | 401 | 167 | 0 | 27 | 427 | 2 | 402 | 4.79e-169 | 483 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1136140 | Q2HUT2 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa1136140 | 0.804159 | 2.469370e-49 | -8.615850e-47 |
Msa0008850 | Msa1136140 | 0.821786 | 3.355831e-53 | -8.615850e-47 |
Msa0020630 | Msa1136140 | 0.810734 | 9.946954e-51 | -8.615850e-47 |
Msa0030030 | Msa1136140 | 0.825528 | 4.463812e-54 | -8.615850e-47 |
Msa0038310 | Msa1136140 | 0.803560 | 3.288387e-49 | -8.615850e-47 |
Msa0051100 | Msa1136140 | 0.815286 | 9.994123e-52 | -8.615850e-47 |
Msa0053480 | Msa1136140 | 0.802330 | 5.905077e-49 | -8.615850e-47 |
Msa0060600 | Msa1136140 | 0.827248 | 1.737163e-54 | -8.615850e-47 |
Msa0077330 | Msa1136140 | 0.806827 | 6.808073e-50 | -8.615850e-47 |
Msa0087110 | Msa1136140 | 0.807121 | 5.899123e-50 | -8.615850e-47 |
Msa0093440 | Msa1136140 | 0.811818 | 5.787080e-51 | -8.615850e-47 |
Msa0103060 | Msa1136140 | 0.806298 | 8.802128e-50 | -8.615850e-47 |
Msa0105340 | Msa1136140 | 0.830622 | 2.647033e-55 | -8.615850e-47 |
Msa0621890 | Msa1136140 | 0.828408 | 9.140229e-55 | -8.615850e-47 |
Msa0626230 | Msa1136140 | 0.828042 | 1.119896e-54 | -8.615850e-47 |
Msa0635990 | Msa1136140 | 0.806310 | 8.754635e-50 | -8.615850e-47 |
Msa0646390 | Msa1136140 | 0.805979 | 1.027677e-49 | -8.615850e-47 |
Msa0647000 | Msa1136140 | 0.812563 | 3.981791e-51 | -8.615850e-47 |
Msa0650650 | Msa1136140 | 0.811005 | 8.691629e-51 | -8.615850e-47 |
Msa0650740 | Msa1136140 | 0.804993 | 1.654142e-49 | -8.615850e-47 |
Msa0654060 | Msa1136140 | 0.814836 | 1.257870e-51 | -8.615850e-47 |
Msa0656270 | Msa1136140 | 0.821806 | 3.319419e-53 | -8.615850e-47 |
Msa0657820 | Msa1136140 | 0.803299 | 3.724196e-49 | -8.615850e-47 |
Msa0685880 | Msa1136140 | 0.807205 | 5.663035e-50 | -8.615850e-47 |
Msa0697140 | Msa1136140 | 0.808433 | 3.105075e-50 | -8.615850e-47 |
Msa0700070 | Msa1136140 | 0.823214 | 1.562161e-53 | -8.615850e-47 |
Msa0721150 | Msa1136140 | 0.808432 | 3.106295e-50 | -8.615850e-47 |
Msa0722930 | Msa1136140 | 0.825857 | 3.728111e-54 | -8.615850e-47 |
Msa0723140 | Msa1136140 | 0.827856 | 1.241311e-54 | -8.615850e-47 |
Msa0739610 | Msa1136140 | 0.812503 | 4.102971e-51 | -8.615850e-47 |
Msa0778580 | Msa1136140 | 0.804964 | 1.677498e-49 | -8.615850e-47 |
Msa0804340 | Msa1136140 | 0.807015 | 6.214471e-50 | -8.615850e-47 |
Msa0815950 | Msa1136140 | 0.811813 | 5.803499e-51 | -8.615850e-47 |
Msa0842270 | Msa1136140 | 0.803639 | 3.167375e-49 | -8.615850e-47 |
Msa0140910 | Msa1136140 | 0.809937 | 1.477815e-50 | -8.615850e-47 |
Msa0159750 | Msa1136140 | 0.807475 | 4.963497e-50 | -8.615850e-47 |
Msa0169960 | Msa1136140 | 0.817143 | 3.841349e-52 | -8.615850e-47 |
Msa0175530 | Msa1136140 | 0.808658 | 2.779540e-50 | -8.615850e-47 |
Msa0181410 | Msa1136140 | 0.826150 | 3.176144e-54 | -8.615850e-47 |
Msa0185640 | Msa1136140 | -0.802190 | 6.311526e-49 | -8.615850e-47 |
Msa0213090 | Msa1136140 | 0.805538 | 1.272075e-49 | -8.615850e-47 |
Msa0223100 | Msa1136140 | 0.805209 | 1.491060e-49 | -8.615850e-47 |
Msa0223380 | Msa1136140 | 0.816469 | 5.443351e-52 | -8.615850e-47 |
Msa0226290 | Msa1136140 | 0.830267 | 3.233505e-55 | -8.615850e-47 |
Msa0371420 | Msa1136140 | -0.822350 | 2.483516e-53 | -8.615850e-47 |
Msa0408410 | Msa1136140 | 0.803003 | 4.288876e-49 | -8.615850e-47 |
Msa0411000 | Msa1136140 | 0.839079 | 1.963881e-57 | -8.615850e-47 |
Msa0414070 | Msa1136140 | 0.802608 | 5.176307e-49 | -8.615850e-47 |
Msa0418000 | Msa1136140 | 0.800443 | 1.437548e-48 | -8.615850e-47 |
Msa0419620 | Msa1136140 | -0.853339 | 2.551481e-61 | -8.615850e-47 |
Msa0423600 | Msa1136140 | 0.807584 | 4.707161e-50 | -8.615850e-47 |
Msa0427050 | Msa1136140 | 0.809203 | 2.125217e-50 | -8.615850e-47 |
Msa0440110 | Msa1136140 | 0.806328 | 8.676275e-50 | -8.615850e-47 |
Msa0454940 | Msa1136140 | 0.812339 | 4.457062e-51 | -8.615850e-47 |
Msa0455230 | Msa1136140 | 0.821507 | 3.893102e-53 | -8.615850e-47 |
Msa0459120 | Msa1136140 | 0.815651 | 8.288415e-52 | -8.615850e-47 |
Msa0465680 | Msa1136140 | -0.830786 | 2.414231e-55 | -8.615850e-47 |
Msa0984850 | Msa1136140 | 0.802090 | 6.615549e-49 | -8.615850e-47 |
Msa0988500 | Msa1136140 | 0.819859 | 9.309998e-53 | -8.615850e-47 |
Msa1000020 | Msa1136140 | 0.809115 | 2.219706e-50 | -8.615850e-47 |
Msa1016110 | Msa1136140 | 0.822028 | 2.948275e-53 | -8.615850e-47 |
Msa1032350 | Msa1136140 | 0.824706 | 6.980757e-54 | -8.615850e-47 |
Msa1036350 | Msa1136140 | 0.830687 | 2.552302e-55 | -8.615850e-47 |
Msa1043870 | Msa1136140 | 0.818451 | 1.946765e-52 | -8.615850e-47 |
Msa1056640 | Msa1136140 | 0.810597 | 1.064933e-50 | -8.615850e-47 |
Msa1069300 | Msa1136140 | 0.815310 | 9.868707e-52 | -8.615850e-47 |
Msa1072350 | Msa1136140 | 0.810601 | 1.062641e-50 | -8.615850e-47 |
Msa1076630 | Msa1136140 | 0.830661 | 2.589524e-55 | -8.615850e-47 |
Msa1080790 | Msa1136140 | 0.845466 | 3.991248e-59 | -8.615850e-47 |
Msa1100600 | Msa1136140 | 0.888000 | 8.699181e-73 | -8.615850e-47 |
Msa0252180 | Msa1136140 | 0.823655 | 1.232300e-53 | -8.615850e-47 |
Msa0253370 | Msa1136140 | 0.823894 | 1.083311e-53 | -8.615850e-47 |
Msa0256430 | Msa1136140 | 0.803087 | 4.120987e-49 | -8.615850e-47 |
Msa0265210 | Msa1136140 | 0.813408 | 2.598370e-51 | -8.615850e-47 |
Msa0288240 | Msa1136140 | 0.800562 | 1.360050e-48 | -8.615850e-47 |
Msa0288330 | Msa1136140 | 0.802025 | 6.822442e-49 | -8.615850e-47 |
Msa0290650 | Msa1136140 | 0.807683 | 4.485266e-50 | -8.615850e-47 |
Msa0303200 | Msa1136140 | 0.821862 | 3.221503e-53 | -8.615850e-47 |
Msa0304740 | Msa1136140 | 0.808380 | 3.187277e-50 | -8.615850e-47 |
Msa0323630 | Msa1136140 | 0.816473 | 5.432480e-52 | -8.615850e-47 |
Msa0325470 | Msa1136140 | 0.807210 | 5.648567e-50 | -8.615850e-47 |
Msa0326670 | Msa1136140 | 0.804704 | 1.901423e-49 | -8.615850e-47 |
Msa0329710 | Msa1136140 | 0.804511 | 2.085379e-49 | -8.615850e-47 |
Msa0330270 | Msa1136140 | 0.814709 | 1.341982e-51 | -8.615850e-47 |
Msa0330400 | Msa1136140 | 0.818603 | 1.798435e-52 | -8.615850e-47 |
Msa0331590 | Msa1136140 | 0.813276 | 2.778673e-51 | -8.615850e-47 |
Msa0331740 | Msa1136140 | 0.835970 | 1.230253e-56 | -8.615850e-47 |
Msa0336270 | Msa1136140 | 0.848704 | 5.172133e-60 | -8.615850e-47 |
Msa0340550 | Msa1136140 | 0.801705 | 7.935764e-49 | -8.615850e-47 |
Msa0362430 | Msa1136140 | 0.828720 | 7.682765e-55 | -8.615850e-47 |
Msa0363460 | Msa1136140 | 0.817841 | 2.674345e-52 | -8.615850e-47 |
Msa1108780 | Msa1136140 | 0.835960 | 1.237891e-56 | -8.615850e-47 |
Msa1113210 | Msa1136140 | 0.822016 | 2.967158e-53 | -8.615850e-47 |
Msa1118930 | Msa1136140 | 0.851670 | 7.627043e-61 | -8.615850e-47 |
Msa1130650 | Msa1136140 | 0.823625 | 1.252462e-53 | -8.615850e-47 |
Msa1133660 | Msa1136140 | 0.835516 | 1.603870e-56 | -8.615850e-47 |
Msa1136140 | Msa1161520 | 0.804121 | 2.514942e-49 | -8.615850e-47 |
Msa1136140 | Msa1184050 | 0.804118 | 2.518849e-49 | -8.615850e-47 |
Msa1136140 | Msa1188820 | 0.831046 | 2.084143e-55 | -8.615850e-47 |
Msa1136140 | Msa1211390 | 0.806785 | 6.949783e-50 | -8.615850e-47 |
Msa1136140 | Msa1220230 | 0.810168 | 1.318255e-50 | -8.615850e-47 |
Msa1136140 | Msa1233770 | 0.824130 | 9.535886e-54 | -8.615850e-47 |
Msa1136140 | Msa1237260 | 0.808189 | 3.500542e-50 | -8.615850e-47 |
Msa1136140 | Msa1276080 | 0.820669 | 6.069814e-53 | -8.615850e-47 |
Msa1136140 | Msa1287160 | 0.803739 | 3.019487e-49 | -8.615850e-47 |
Msa1136140 | Msa1296960 | -0.803979 | 2.691272e-49 | -8.615850e-47 |
Msa1136140 | Msa1299110 | 0.801834 | 7.467830e-49 | -8.615850e-47 |
Msa1136140 | Msa1317710 | 0.835724 | 1.420454e-56 | -8.615850e-47 |
Msa1136140 | Msa1326000 | 0.801657 | 8.120306e-49 | -8.615850e-47 |
Msa1136140 | Msa1327820 | 0.808364 | 3.211694e-50 | -8.615850e-47 |
Msa1136140 | Msa1329990 | 0.810242 | 1.270680e-50 | -8.615850e-47 |
Msa1136140 | Msa1335720 | 0.822432 | 2.375924e-53 | -8.615850e-47 |
Msa1136140 | Msa1335970 | -0.802234 | 6.181052e-49 | -8.615850e-47 |
Msa1136140 | Msa1370630 | 0.819758 | 9.816229e-53 | -8.615850e-47 |
Msa1136140 | Msa1373910 | 0.809177 | 2.152287e-50 | -8.615850e-47 |
Msa1136140 | Msa1386520 | 0.810255 | 1.262370e-50 | -8.615850e-47 |
Msa1136140 | Msa1387090 | 0.818048 | 2.402306e-52 | -8.615850e-47 |
Msa1136140 | Msa1397540 | 0.813120 | 3.005594e-51 | -8.615850e-47 |
Msa1136140 | Msa1405470 | 0.800683 | 1.284596e-48 | -8.615850e-47 |
Msa1136140 | Msa1419110 | 0.802621 | 5.143510e-49 | -8.615850e-47 |
Msa1136140 | Msa1428440 | 0.836378 | 9.693392e-57 | -8.615850e-47 |
Msa1136140 | Msa1431000 | 0.804054 | 2.597183e-49 | -8.615850e-47 |
Msa1136140 | Msa1440180 | 0.804008 | 2.655006e-49 | -8.615850e-47 |
Msa1136140 | Msa1449740 | 0.803332 | 3.666883e-49 | -8.615850e-47 |
Msa0498920 | Msa1136140 | 0.807888 | 4.055824e-50 | -8.615850e-47 |
Msa0502910 | Msa1136140 | 0.838948 | 2.123254e-57 | -8.615850e-47 |
Msa0505660 | Msa1136140 | 0.805950 | 1.042237e-49 | -8.615850e-47 |
Msa0511720 | Msa1136140 | -0.800505 | 1.396715e-48 | -8.615850e-47 |
Msa0549740 | Msa1136140 | 0.816818 | 4.546420e-52 | -8.615850e-47 |
Msa0553520 | Msa1136140 | 0.809964 | 1.458198e-50 | -8.615850e-47 |
Msa0563140 | Msa1136140 | 0.851210 | 1.029703e-60 | -8.615850e-47 |
Msa0579340 | Msa1136140 | 0.812305 | 4.532650e-51 | -8.615850e-47 |
Msa0598250 | Msa1136140 | 0.820765 | 5.770432e-53 | -8.615850e-47 |
Msa0843280 | Msa1136140 | 0.825949 | 3.545730e-54 | -8.615850e-47 |
Msa0847200 | Msa1136140 | 0.802490 | 5.474204e-49 | -8.615850e-47 |
Msa0868040 | Msa1136140 | 0.814762 | 1.306155e-51 | -8.615850e-47 |
Msa0883660 | Msa1136140 | 0.807156 | 5.801234e-50 | -8.615850e-47 |
Msa0887000 | Msa1136140 | 0.816476 | 5.422956e-52 | -8.615850e-47 |
Msa0887070 | Msa1136140 | 0.802148 | 6.436524e-49 | -8.615850e-47 |
Msa0899700 | Msa1136140 | 0.800948 | 1.133927e-48 | -8.615850e-47 |
Msa0903730 | Msa1136140 | 0.813785 | 2.147107e-51 | -8.615850e-47 |
Msa0946120 | Msa1136140 | 0.803472 | 3.429564e-49 | -8.615850e-47 |
Msa0952990 | Msa1136140 | 0.800499 | 1.400300e-48 | -8.615850e-47 |
Msa0961420 | Msa1136140 | -0.812970 | 3.243336e-51 | -8.615850e-47 |
Msa0964680 | Msa1136140 | 0.822941 | 1.809655e-53 | -8.615850e-47 |
Msa0965520 | Msa1136140 | 0.802390 | 5.738169e-49 | -8.615850e-47 |
Msa0970050 | Msa1136140 | 0.809414 | 1.914352e-50 | -8.615850e-47 |
Msa0973130 | Msa1136140 | 0.809060 | 2.280608e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1136140 | MtrunA17_Chr7g0217381 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
Msa1136140 | MtrunA17_Chr7g0217401 | 93.735 | 431 | 26 | 1 | 1 | 430 | 1 | 431 | 0.0 | 801 |
Msa1136140 | MtrunA17_Chr3g0090101 | 89.362 | 376 | 40 | 0 | 55 | 430 | 9 | 384 | 0.0 | 650 |
Msa1136140 | MtrunA17_Chr3g0105861 | 54.048 | 420 | 193 | 0 | 11 | 430 | 12 | 431 | 6.32e-161 | 460 |
Msa1136140 | MtrunA17_Chr8g0361631 | 48.768 | 406 | 205 | 2 | 26 | 430 | 4 | 407 | 1.78e-141 | 410 |
Msa1136140 | MtrunA17_Chr8g0361211 | 46.135 | 401 | 214 | 1 | 30 | 430 | 53 | 451 | 1.48e-127 | 376 |
Msa1136140 | MtrunA17_Chr8g0361641 | 47.425 | 369 | 192 | 1 | 62 | 430 | 1 | 367 | 2.17e-125 | 367 |
Msa1136140 | MtrunA17_Chr8g0361591 | 47.154 | 369 | 193 | 1 | 62 | 430 | 1 | 367 | 1.55e-113 | 337 |
Msa1136140 | MtrunA17_Chr4g0022261 | 40.306 | 392 | 227 | 3 | 42 | 429 | 135 | 523 | 7.04e-106 | 323 |
Msa1136140 | MtrunA17_Chr7g0256281 | 39.948 | 388 | 225 | 2 | 42 | 429 | 143 | 522 | 1.12e-101 | 312 |
Msa1136140 | MtrunA17_Chr7g0239011 | 38.961 | 385 | 224 | 3 | 17 | 390 | 29 | 413 | 1.09e-91 | 284 |
Msa1136140 | MtrunA17_Chr7g0239021 | 35.499 | 431 | 262 | 3 | 11 | 426 | 115 | 544 | 1.62e-88 | 279 |
Msa1136140 | MtrunA17_Chr1g0199431 | 43.878 | 294 | 162 | 2 | 27 | 320 | 140 | 430 | 2.44e-85 | 267 |
Msa1136140 | MtrunA17_Chr3g0105831 | 59.314 | 204 | 82 | 1 | 57 | 259 | 5 | 208 | 1.45e-80 | 247 |
Msa1136140 | MtrunA17_Chr7g0256251 | 42.238 | 277 | 160 | 0 | 40 | 316 | 141 | 417 | 1.08e-79 | 252 |
Msa1136140 | MtrunA17_Chr1g0171021 | 40.123 | 324 | 165 | 4 | 10 | 309 | 104 | 422 | 6.97e-77 | 246 |
Msa1136140 | MtrunA17_Chr3g0122241 | 33.806 | 423 | 262 | 7 | 23 | 430 | 51 | 470 | 1.95e-63 | 211 |
Msa1136140 | MtrunA17_Chr3g0105821 | 54.667 | 150 | 68 | 0 | 281 | 430 | 1 | 150 | 5.14e-50 | 166 |
Msa1136140 | MtrunA17_Chr1g0199441 | 37.069 | 116 | 70 | 2 | 316 | 430 | 33 | 146 | 3.28e-19 | 84.0 |
Msa1136140 | MtrunA17_Chr7g0256241 | 37.931 | 116 | 71 | 1 | 313 | 428 | 1 | 115 | 4.33e-18 | 79.7 |
Msa1136140 | MtrunA17_Chr6g0458931 | 24.113 | 423 | 267 | 14 | 7 | 397 | 15 | 415 | 4.61e-17 | 83.2 |
Msa1136140 | MtrunA17_Chr7g0268151 | 26.820 | 261 | 177 | 5 | 178 | 426 | 11 | 269 | 2.89e-15 | 75.5 |
Msa1136140 | MtrunA17_Chr1g0171011 | 33.333 | 117 | 77 | 1 | 314 | 430 | 21 | 136 | 3.08e-15 | 72.4 |
Msa1136140 | MtrunA17_Chr5g0407141 | 26.799 | 403 | 264 | 13 | 42 | 428 | 32 | 419 | 4.69e-14 | 73.6 |
Msa1136140 | MtrunA17_Chr2g0331721 | 24.745 | 392 | 246 | 16 | 36 | 395 | 46 | 420 | 5.07e-14 | 73.6 |
Msa1136140 | MtrunA17_Chr4g0057851 | 22.493 | 369 | 247 | 11 | 49 | 390 | 21 | 377 | 1.79e-12 | 68.9 |
Msa1136140 | MtrunA17_Chr8g0376991 | 20.260 | 385 | 272 | 11 | 36 | 395 | 21 | 395 | 7.86e-12 | 67.0 |
Msa1136140 | MtrunA17_Chr7g0230011 | 25.245 | 408 | 252 | 13 | 20 | 395 | 16 | 402 | 1.94e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1136140 | AT3G28960.5 | 58.354 | 401 | 167 | 0 | 27 | 427 | 2 | 402 | 4.87e-170 | 483 |
Msa1136140 | AT3G28960.2 | 58.354 | 401 | 167 | 0 | 27 | 427 | 2 | 402 | 4.87e-170 | 483 |
Msa1136140 | AT3G28960.3 | 58.354 | 401 | 167 | 0 | 27 | 427 | 2 | 402 | 4.87e-170 | 483 |
Msa1136140 | AT3G28960.1 | 58.354 | 401 | 167 | 0 | 27 | 427 | 2 | 402 | 4.87e-170 | 483 |
Msa1136140 | AT5G15240.1 | 57.524 | 412 | 174 | 1 | 16 | 426 | 8 | 419 | 5.61e-168 | 478 |
Msa1136140 | AT3G28960.4 | 59.159 | 333 | 136 | 0 | 95 | 427 | 1 | 333 | 1.76e-145 | 418 |
Msa1136140 | AT5G15240.3 | 58.559 | 333 | 137 | 1 | 95 | 426 | 1 | 333 | 1.31e-136 | 395 |
Msa1136140 | AT2G39130.2 | 41.667 | 408 | 232 | 4 | 26 | 430 | 144 | 548 | 1.32e-115 | 349 |
Msa1136140 | AT2G39130.1 | 41.667 | 408 | 232 | 4 | 26 | 430 | 144 | 548 | 1.32e-115 | 349 |
Msa1136140 | AT2G41190.1 | 41.162 | 413 | 237 | 2 | 17 | 429 | 128 | 534 | 3.63e-115 | 348 |
Msa1136140 | AT5G02170.1 | 39.447 | 398 | 238 | 2 | 35 | 430 | 129 | 525 | 1.06e-107 | 328 |
Msa1136140 | AT2G39130.3 | 43.605 | 344 | 191 | 2 | 26 | 367 | 144 | 486 | 1.20e-105 | 322 |
Msa1136140 | AT5G02180.1 | 37.560 | 418 | 246 | 3 | 27 | 430 | 132 | 548 | 1.70e-104 | 321 |
Msa1136140 | AT5G02180.2 | 37.560 | 418 | 246 | 3 | 27 | 430 | 132 | 548 | 1.70e-104 | 321 |
Msa1136140 | AT3G09340.1 | 40.189 | 423 | 244 | 5 | 14 | 430 | 104 | 523 | 5.27e-104 | 318 |
Msa1136140 | AT3G54830.2 | 43.478 | 345 | 188 | 1 | 39 | 376 | 148 | 492 | 2.80e-103 | 317 |
Msa1136140 | AT3G54830.1 | 43.478 | 345 | 188 | 1 | 39 | 376 | 148 | 492 | 2.80e-103 | 317 |
Msa1136140 | AT3G09330.1 | 40.657 | 396 | 231 | 3 | 37 | 430 | 130 | 523 | 7.02e-103 | 316 |
Msa1136140 | AT2G41190.2 | 42.776 | 353 | 197 | 1 | 17 | 369 | 128 | 475 | 3.44e-100 | 308 |
Msa1136140 | AT5G02170.2 | 39.106 | 358 | 187 | 2 | 35 | 390 | 129 | 457 | 3.73e-94 | 291 |
Msa1136140 | AT5G16740.1 | 34.211 | 418 | 265 | 7 | 18 | 430 | 8 | 420 | 9.91e-70 | 227 |
Msa1136140 | AT5G15240.2 | 58.480 | 171 | 71 | 0 | 256 | 426 | 139 | 309 | 6.09e-63 | 206 |
Msa1136140 | AT5G15240.2 | 56.818 | 132 | 57 | 0 | 16 | 147 | 8 | 139 | 2.95e-42 | 151 |
Msa1136140 | AT2G42005.1 | 27.970 | 404 | 261 | 15 | 42 | 429 | 24 | 413 | 1.33e-26 | 111 |
Msa1136140 | AT3G11900.2 | 25.647 | 425 | 270 | 12 | 33 | 426 | 23 | 432 | 3.55e-24 | 104 |
Msa1136140 | AT3G11900.1 | 25.647 | 425 | 270 | 12 | 33 | 426 | 23 | 432 | 3.55e-24 | 104 |
Msa1136140 | AT4G38250.1 | 26.098 | 410 | 265 | 15 | 42 | 426 | 35 | 431 | 3.15e-19 | 89.7 |
Msa1136140 | AT5G40780.1 | 23.356 | 441 | 283 | 16 | 26 | 425 | 12 | 438 | 4.05e-16 | 80.5 |
Msa1136140 | AT1G61270.1 | 22.572 | 381 | 269 | 14 | 36 | 395 | 32 | 407 | 1.20e-14 | 75.9 |
Msa1136140 | AT3G01760.1 | 22.330 | 412 | 269 | 15 | 23 | 395 | 7 | 406 | 1.32e-14 | 75.9 |
Msa1136140 | AT5G40780.3 | 23.691 | 401 | 262 | 14 | 56 | 425 | 3 | 390 | 7.23e-14 | 73.2 |
Msa1136140 | AT5G40780.2 | 23.691 | 401 | 262 | 14 | 56 | 425 | 3 | 390 | 7.23e-14 | 73.2 |
Msa1136140 | AT1G48640.1 | 24.272 | 412 | 258 | 15 | 21 | 395 | 18 | 412 | 5.13e-13 | 70.9 |
Msa1136140 | AT1G24400.1 | 24.093 | 386 | 255 | 14 | 36 | 395 | 27 | 400 | 9.48e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATAGCAGTGGGAATTTC+TGG | 0.162835 | 7_4:-4203450 | Msa1136140:CDS |
TTCTTTCGTACATGTGTTAA+TGG | 0.173006 | 7_4:-4206844 | Msa1136140:CDS |
GCATTGGCTGTTCCTTTCTT+TGG | 0.176359 | 7_4:-4203612 | Msa1136140:CDS |
TTGTGTTACTTGAGGATTTC+TGG | 0.198008 | 7_4:-4203528 | Msa1136140:CDS |
AGATAGTAATGGCACATTTA+AGG | 0.203231 | 7_4:+4206942 | None:intergenic |
ATCAATGCAAATTTGGATAT+TGG | 0.206542 | 7_4:+4203747 | None:intergenic |
ATTGAAGAGTTTCAAGTATA+TGG | 0.226342 | 7_4:-4204717 | Msa1136140:CDS |
AATGGACTCAATGCAATTTC+AGG | 0.237188 | 7_4:-4206826 | Msa1136140:intron |
CTTTGGATCTCTCATGTCAT+TGG | 0.244446 | 7_4:-4203595 | Msa1136140:CDS |
TATGCATCAATGGCTATAAT+TGG | 0.246951 | 7_4:-4203870 | Msa1136140:CDS |
TAATTATCTTGCCAACAATT+TGG | 0.248297 | 7_4:-4204650 | Msa1136140:CDS |
TGTTGCCATCAATGCAAATT+TGG | 0.264684 | 7_4:+4203740 | None:intergenic |
AATATCCAAATTTGCATTGA+TGG | 0.269723 | 7_4:-4203745 | Msa1136140:CDS |
GCAAGTGGTGTGTTTGCTTC+TGG | 0.276972 | 7_4:-4204594 | Msa1136140:CDS |
AATAGTACAAAATTTGTAAT+AGG | 0.285577 | 7_4:-4203406 | Msa1136140:exon |
CGTATGACTGATACTTTATT+CGG | 0.286623 | 7_4:+4203242 | None:intergenic |
TGAGGATTTCTGGAAGTTAT+AGG | 0.291661 | 7_4:-4203518 | Msa1136140:CDS |
AAAAGGGTGATATTGTAAAT+TGG | 0.296692 | 7_4:-4204515 | Msa1136140:CDS |
GAATTGGTGTTTGTTCTTCA+TGG | 0.308067 | 7_4:+4204416 | None:intergenic |
TATACTTGAAACTCTTCAAT+TGG | 0.309156 | 7_4:+4204720 | None:intergenic |
TTGTAGAGAGTAGGGAAAAC+TGG | 0.331105 | 7_4:+4204441 | None:intergenic |
GAATTGGCCAAAATCAAAAT+AGG | 0.334959 | 7_4:+4203210 | None:intergenic |
AAAGAAATTCTTTGTGATAT+TGG | 0.338449 | 7_4:-4204679 | Msa1136140:CDS |
CAAGTATATGGTTTATCAAT+TGG | 0.342007 | 7_4:-4204705 | Msa1136140:CDS |
GAGCTATACTTGGTTTCAAT+TGG | 0.344596 | 7_4:-4204783 | Msa1136140:CDS |
ATTGGATTCTTGATTCTAGA+AGG | 0.346840 | 7_4:-4204765 | Msa1136140:CDS |
ATAATTGGTTACTTAATGTT+TGG | 0.356635 | 7_4:-4203855 | Msa1136140:CDS |
GATATAGGTGAACTTGCATT+TGG | 0.358275 | 7_4:-4204846 | Msa1136140:CDS |
GATAGTAATGGCACATTTAA+GGG | 0.377039 | 7_4:+4206943 | None:intergenic |
AAATTATCTAACCAAATTGT+TGG | 0.378249 | 7_4:+4204639 | None:intergenic |
TATCTCAAATATGAATGAAT+TGG | 0.385650 | 7_4:+4203194 | None:intergenic |
AAGCACTTACATTAGAGAAT+TGG | 0.385712 | 7_4:+4204400 | None:intergenic |
TATGACTTTCTCCTCATCTA+TGG | 0.387090 | 7_4:+4206900 | None:intergenic |
TCATGGACTGCAACATTTGA+TGG | 0.387602 | 7_4:-4204552 | Msa1136140:CDS |
CTATTATTCTTGTATGTCCT+TGG | 0.388441 | 7_4:+4203687 | None:intergenic |
ATTAAAACATATCCTGATAT+AGG | 0.388581 | 7_4:-4204861 | Msa1136140:CDS |
TTACTATCTGAGTGGAAGTT+AGG | 0.388598 | 7_4:-4206928 | Msa1136140:CDS |
TTAATATAAAACATACAATT+AGG | 0.397042 | 7_4:+4203904 | None:intergenic |
GGATCTCTCATGTCATTGGT+TGG | 0.402895 | 7_4:-4203591 | Msa1136140:CDS |
TGTTATTTGTGAATCAACTT+TGG | 0.404003 | 7_4:+4203830 | None:intergenic |
AATGCAAGTTCACCTATATC+AGG | 0.410489 | 7_4:+4204849 | None:intergenic |
CCTCCCGAGGCTAATGCATA+TGG | 0.412724 | 7_4:+4204975 | None:intergenic |
TCACTAGAGTTCAACGTCAT+TGG | 0.439276 | 7_4:+4203317 | None:intergenic |
CAATAACAGTGCTGATTACA+AGG | 0.451558 | 7_4:+4203637 | None:intergenic |
GGAAGAAGCAGAATTGTTGA+TGG | 0.454149 | 7_4:+4206996 | None:intergenic |
AATTGAGAACAAAATATCCT+AGG | 0.461820 | 7_4:-4207026 | Msa1136140:five_prime_UTR |
CTATAGCAGTGGGAATTTCT+GGG | 0.462326 | 7_4:-4203449 | Msa1136140:CDS |
CTTTCTTATGTATCTGCAAG+TGG | 0.464199 | 7_4:-4204609 | Msa1136140:CDS |
CACAGCTGGTTATGCATCAA+TGG | 0.466143 | 7_4:-4203880 | Msa1136140:CDS |
ACTGCAACATTTGATGGAAT+TGG | 0.466419 | 7_4:-4204546 | Msa1136140:CDS |
ACTGATACTTTATTCGGATC+AGG | 0.467687 | 7_4:+4203248 | None:intergenic |
ATACTTGAAACTCTTCAATT+GGG | 0.474534 | 7_4:+4204721 | None:intergenic |
TGGAATTGGTGTTCATCAAA+AGG | 0.478696 | 7_4:-4204532 | Msa1136140:CDS |
CATTTAAGGGTGGGTTGTTG+AGG | 0.480390 | 7_4:+4206956 | None:intergenic |
CAGCACTGTTATTGTTGCAT+TGG | 0.482051 | 7_4:-4203628 | Msa1136140:CDS |
ATTCATATTTGAGATAATGT+TGG | 0.482195 | 7_4:-4203187 | Msa1136140:three_prime_UTR |
GACAGTGCTCACAAACATAT+TGG | 0.487668 | 7_4:+4203659 | None:intergenic |
GCATACAAGCTAACAGCTGT+TGG | 0.498223 | 7_4:+4204483 | None:intergenic |
TCATGGAATTGTAGAGAGTA+GGG | 0.498553 | 7_4:+4204433 | None:intergenic |
GGTGATATTGTAAATTGGAA+TGG | 0.499497 | 7_4:-4204510 | Msa1136140:CDS |
GATATATACTAGGTGGTAGA+TGG | 0.507879 | 7_4:+4207084 | None:intergenic |
AGCAGAGATATACATGAGAA+TGG | 0.509122 | 7_4:+4203363 | None:intergenic |
ACACAATAACACATCAAAAG+AGG | 0.511196 | 7_4:-4203101 | None:intergenic |
AATGTACACAGAGCTATACT+TGG | 0.520533 | 7_4:-4204793 | Msa1136140:CDS |
TTCCATGTTTGTGTTACTTG+AGG | 0.523391 | 7_4:-4203536 | Msa1136140:CDS |
GTTCCATATGCATTAGCCTC+GGG | 0.527338 | 7_4:-4204978 | Msa1136140:CDS |
CTGAAGTTTCGAAATCTGAA+AGG | 0.529379 | 7_4:+4207058 | None:intergenic |
GACATGAGAGATCCAAAGAA+AGG | 0.530946 | 7_4:+4203600 | None:intergenic |
CATTGGATAAACTCAACGGC+CGG | 0.533497 | 7_4:+4203334 | None:intergenic |
ATGCATTAGCCTCGGGAGGA+TGG | 0.543440 | 7_4:-4204971 | Msa1136140:CDS |
CGTTGAACTCTAGTGACCAT+TGG | 0.543498 | 7_4:-4203310 | Msa1136140:three_prime_UTR |
TTGCAGATACATAAGAAAGA+AGG | 0.550331 | 7_4:+4204613 | None:intergenic |
TGAAAGGTTTGATATATACT+AGG | 0.554122 | 7_4:+4207074 | None:intergenic |
CTTTAAAAGATTTACTTCCA+AGG | 0.555320 | 7_4:-4203704 | Msa1136140:CDS |
GTATATCTCTGCTAGAATCC+CGG | 0.565335 | 7_4:-4203353 | Msa1136140:three_prime_UTR |
GTTCGAGACAGTGGCAATTG+TGG | 0.577139 | 7_4:-4203487 | Msa1136140:CDS |
TTCATGGAATTGTAGAGAGT+AGG | 0.578869 | 7_4:+4204432 | None:intergenic |
GTAATGGCACATTTAAGGGT+GGG | 0.582926 | 7_4:+4206947 | None:intergenic |
AGTAATGGCACATTTAAGGG+TGG | 0.584052 | 7_4:+4206946 | None:intergenic |
GGAATTGGTGTTCATCAAAA+GGG | 0.585498 | 7_4:-4204531 | Msa1136140:CDS |
AATAGCAATATACACAACCT+TGG | 0.598007 | 7_4:-4203775 | Msa1136140:CDS |
ATTGGATAAACTCAACGGCC+GGG | 0.601991 | 7_4:+4203335 | None:intergenic |
GTTAGGACATTCCATAGATG+AGG | 0.603448 | 7_4:-4206911 | Msa1136140:CDS |
AGTTCCATATGCATTAGCCT+CGG | 0.604287 | 7_4:-4204979 | Msa1136140:CDS |
CATACTAATGAAAAGATGCA+TGG | 0.605341 | 7_4:-4204898 | Msa1136140:CDS |
AACTTCCACTCAGATAGTAA+TGG | 0.606012 | 7_4:+4206931 | None:intergenic |
TAGGTAAAAGTATTATGTAG+TGG | 0.618986 | 7_4:-4203387 | Msa1136140:three_prime_UTR |
AATATTTGTAGCTATAGCAG+TGG | 0.623395 | 7_4:-4203460 | Msa1136140:CDS |
ATCCTCAAGTAACACAAACA+TGG | 0.623962 | 7_4:+4203534 | None:intergenic |
ATATTTGTAGCTATAGCAGT+GGG | 0.627316 | 7_4:-4203459 | Msa1136140:CDS |
GAAGTTTGAGTTCGAGACAG+TGG | 0.647608 | 7_4:-4203496 | Msa1136140:CDS |
CATTGATGCATAACCAGCTG+TGG | 0.650269 | 7_4:+4203881 | None:intergenic |
CCATATGCATTAGCCTCGGG+AGG | 0.651069 | 7_4:-4204975 | Msa1136140:CDS |
TAGTTGTTGAGTTTATCCAA+TGG | 0.656017 | 7_4:+4203294 | None:intergenic |
TTTGGATATTGGATTCACCA+AGG | 0.657929 | 7_4:+4203758 | None:intergenic |
ATGTGCCATTACTATCTGAG+TGG | 0.670053 | 7_4:-4206936 | Msa1136140:CDS |
GTATCAGTCATACGTGACGA+TGG | 0.675955 | 7_4:-4203233 | Msa1136140:three_prime_UTR |
AAGGTTTGATATATACTAGG+TGG | 0.690558 | 7_4:+4207077 | None:intergenic |
ACGTCATTGGATAAACTCAA+CGG | 0.693256 | 7_4:+4203330 | None:intergenic |
TAAACTTAACCATCCTCCCG+AGG | 0.693296 | 7_4:+4204962 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAATAATATATATAAAA+AGG | + | chr7_4:4206231-4206250 | None:intergenic | 0.0% |
!!! | ATTTTAGTTAAATAGAATAT+TGG | - | chr7_4:4203694-4203713 | Msa1136140:CDS | 10.0% |
!! | TTAATATAAAACATACAATT+AGG | + | chr7_4:4206285-4206304 | None:intergenic | 10.0% |
!! | GTATATATTGTTAAGAATTA+AGG | + | chr7_4:4203393-4203412 | None:intergenic | 15.0% |
!! | AAAAAAATGTAATAGAAAAG+AGG | + | chr7_4:4203600-4203619 | None:intergenic | 15.0% |
!!! | AATTAATCTTAAATTTTGGT+GGG | + | chr7_4:4204086-4204105 | None:intergenic | 15.0% |
!!! | AAATTAATCTTAAATTTTGG+TGG | + | chr7_4:4204087-4204106 | None:intergenic | 15.0% |
!!! | CAGAAATTAATCTTAAATTT+TGG | + | chr7_4:4204090-4204109 | None:intergenic | 15.0% |
!! | CATCATCATATATATATAAA+GGG | + | chr7_4:4204117-4204136 | None:intergenic | 15.0% |
!! | TCATCATCATATATATATAA+AGG | + | chr7_4:4204118-4204137 | None:intergenic | 15.0% |
!! | ATTACATAGTTTAAATATCT+TGG | - | chr7_4:4204643-4204662 | Msa1136140:CDS | 15.0% |
!! | TATCTAAATGTTTATATTGT+TGG | - | chr7_4:4204962-4204981 | Msa1136140:CDS | 15.0% |
!!! | ATAGTTTTTTTTCTTTTATG+AGG | - | chr7_4:4205013-4205032 | Msa1136140:intron | 15.0% |
!!! | TAGTTTTTTTTCTTTTATGA+GGG | - | chr7_4:4205014-4205033 | Msa1136140:intron | 15.0% |
!!! | TTATTATTTTGTCAATATCA+TGG | - | chr7_4:4205617-4205636 | Msa1136140:intron | 15.0% |
!! | AATAGTACAAAATTTGTAAT+AGG | - | chr7_4:4206780-4206799 | Msa1136140:intron | 15.0% |
!! | TATTATTCGTAAACTTATCA+AGG | - | chr7_4:4203776-4203795 | Msa1136140:CDS | 20.0% |
!!! | TGCATAAGCTATTTTTTATA+AGG | - | chr7_4:4203922-4203941 | Msa1136140:intron | 20.0% |
!!! | ATATAGTTCTGTATATGATT+TGG | - | chr7_4:4204165-4204184 | Msa1136140:intron | 20.0% |
!!! | TAGATTCTTTTCAACTTAAA+CGG | + | chr7_4:4204779-4204798 | None:intergenic | 20.0% |
!! | AAATGCTAATGATGTTTATA+TGG | - | chr7_4:4204801-4204820 | Msa1136140:CDS | 20.0% |
!! | TGGTTTATGATAAAACATTA+TGG | - | chr7_4:4204821-4204840 | Msa1136140:CDS | 20.0% |
!!! | TTTATATTGTTGGTCATTTT+TGG | - | chr7_4:4204972-4204991 | Msa1136140:CDS | 20.0% |
!!! | TTATATTGTTGGTCATTTTT+GGG | - | chr7_4:4204973-4204992 | Msa1136140:CDS | 20.0% |
!!! | TTATATGACTTTGATTTTTC+AGG | - | chr7_4:4205169-4205188 | Msa1136140:intron | 20.0% |
!! | ATTAAAACATATCCTGATAT+AGG | - | chr7_4:4205325-4205344 | Msa1136140:intron | 20.0% |
!! | AAAGAAATTCTTTGTGATAT+TGG | - | chr7_4:4205507-4205526 | Msa1136140:intron | 20.0% |
!! | AAATTATCTAACCAAATTGT+TGG | + | chr7_4:4205550-4205569 | None:intergenic | 20.0% |
!!! | TGCTTATACTTTCTTTTTTT+TGG | - | chr7_4:4205804-4205823 | Msa1136140:intron | 20.0% |
!!! | GCTTATACTTTCTTTTTTTT+GGG | - | chr7_4:4205805-4205824 | Msa1136140:intron | 20.0% |
!! | ATAATTGGTTACTTAATGTT+TGG | - | chr7_4:4206331-4206350 | Msa1136140:intron | 20.0% |
!!! | TCTTTTAAAGCATTTGTAAT+TGG | + | chr7_4:4206472-4206491 | None:intergenic | 20.0% |
!! | TATCTCAAATATGAATGAAT+TGG | + | chr7_4:4206995-4207014 | None:intergenic | 20.0% |
!!! | ATTCATATTTGAGATAATGT+TGG | - | chr7_4:4206999-4207018 | Msa1136140:five_prime_UTR | 20.0% |
! | TGAAAGGTTTGATATATACT+AGG | + | chr7_4:4203115-4203134 | None:intergenic | 25.0% |
! | AATTGAGAACAAAATATCCT+AGG | - | chr7_4:4203160-4203179 | Msa1136140:three_prime_UTR | 25.0% |
! | AATAAGATATAGAGCTCATT+TGG | + | chr7_4:4203964-4203983 | None:intergenic | 25.0% |
! | TGTTTATATTAGAGCTATCA+AGG | - | chr7_4:4204255-4204274 | Msa1136140:intron | 25.0% |
! | TATCCAAAACTAAAGTAAGA+AGG | + | chr7_4:4204384-4204403 | None:intergenic | 25.0% |
! | ATACTTGAAACTCTTCAATT+GGG | + | chr7_4:4205468-4205487 | None:intergenic | 25.0% |
! | TATACTTGAAACTCTTCAAT+TGG | + | chr7_4:4205469-4205488 | None:intergenic | 25.0% |
!! | ATTGAAGAGTTTCAAGTATA+TGG | - | chr7_4:4205469-4205488 | Msa1136140:intron | 25.0% |
! | CAAGTATATGGTTTATCAAT+TGG | - | chr7_4:4205481-4205500 | Msa1136140:intron | 25.0% |
! | TAATTATCTTGCCAACAATT+TGG | - | chr7_4:4205536-4205555 | Msa1136140:intron | 25.0% |
! | AAAAGGGTGATATTGTAAAT+TGG | - | chr7_4:4205671-4205690 | Msa1136140:intron | 25.0% |
! | TATAAGTTCGCATTAAACTT+AGG | - | chr7_4:4205891-4205910 | Msa1136140:intron | 25.0% |
! | ATAATCGAAAACTCAAGATA+TGG | - | chr7_4:4206055-4206074 | Msa1136140:intron | 25.0% |
! | TTTACCTTTACTTAAAGCAT+TGG | - | chr7_4:4206174-4206193 | Msa1136140:intron | 25.0% |
!!! | ATGTGTTTATTTTACATTGC+AGG | - | chr7_4:4206258-4206277 | Msa1136140:intron | 25.0% |
!! | TGTTATTTGTGAATCAACTT+TGG | + | chr7_4:4206359-4206378 | None:intergenic | 25.0% |
!!! | CTTGAACTTATTTTGTTTAG+TGG | + | chr7_4:4206391-4206410 | None:intergenic | 25.0% |
! | ATCAATGCAAATTTGGATAT+TGG | + | chr7_4:4206442-4206461 | None:intergenic | 25.0% |
! | AATATCCAAATTTGCATTGA+TGG | - | chr7_4:4206441-4206460 | Msa1136140:intron | 25.0% |
!! | CTTTAAAAGATTTACTTCCA+AGG | - | chr7_4:4206482-4206501 | Msa1136140:intron | 25.0% |
!!! | TAGGTAAAAGTATTATGTAG+TGG | - | chr7_4:4206799-4206818 | Msa1136140:intron | 25.0% |
!! | AACTCAACAACTATTTTGTT+AGG | - | chr7_4:4206902-4206921 | Msa1136140:CDS | 25.0% |
!! | TATTTTGTTAGGAATGTGTA+GGG | - | chr7_4:4206913-4206932 | Msa1136140:CDS | 25.0% |
AAGGTTTGATATATACTAGG+TGG | + | chr7_4:4203112-4203131 | None:intergenic | 30.0% | |
GATAGTAATGGCACATTTAA+GGG | + | chr7_4:4203246-4203265 | None:intergenic | 30.0% | |
AGATAGTAATGGCACATTTA+AGG | + | chr7_4:4203247-4203266 | None:intergenic | 30.0% | |
!! | ATTTTTGTTTGAAGGATGAG+AGG | + | chr7_4:4203313-4203332 | None:intergenic | 30.0% |
!! | GATACTGCATTTTTGTTTGA+AGG | + | chr7_4:4203321-4203340 | None:intergenic | 30.0% |
TTCTTTCGTACATGTGTTAA+TGG | - | chr7_4:4203342-4203361 | Msa1136140:three_prime_UTR | 30.0% | |
TAGAAAAGAGGAAAACATAG+TGG | + | chr7_4:4203588-4203607 | None:intergenic | 30.0% | |
! | TTCTGTATATGATTTGGAGT+AGG | - | chr7_4:4204171-4204190 | Msa1136140:intron | 30.0% |
AAACTAAAGTAAGAAGGTGA+GGG | + | chr7_4:4204378-4204397 | None:intergenic | 30.0% | |
AAAACTAAAGTAAGAAGGTG+AGG | + | chr7_4:4204379-4204398 | None:intergenic | 30.0% | |
!! | TCACCTTCTTACTTTAGTTT+TGG | - | chr7_4:4204378-4204397 | Msa1136140:intron | 30.0% |
TTCTCCATCATGTTGTATTA+TGG | + | chr7_4:4204671-4204690 | None:intergenic | 30.0% | |
GTAAATCATCGTATTCAAGT+TGG | - | chr7_4:4204704-4204723 | Msa1136140:CDS | 30.0% | |
!! | TTCAAGTTGGATGATTGAAA+TGG | - | chr7_4:4204717-4204736 | Msa1136140:CDS | 30.0% |
TTGTAATGTTGATGCATTCA+AGG | + | chr7_4:4204937-4204956 | None:intergenic | 30.0% | |
CATACTAATGAAAAGATGCA+TGG | - | chr7_4:4205288-4205307 | Msa1136140:intron | 30.0% | |
GAACTTGCATTTGGAAAAAT+AGG | - | chr7_4:4205349-4205368 | Msa1136140:intron | 30.0% | |
ATTGGATTCTTGATTCTAGA+AGG | - | chr7_4:4205421-4205440 | Msa1136140:intron | 30.0% | |
TTGCAGATACATAAGAAAGA+AGG | + | chr7_4:4205576-4205595 | None:intergenic | 30.0% | |
GGTGATATTGTAAATTGGAA+TGG | - | chr7_4:4205676-4205695 | Msa1136140:intron | 30.0% | |
AAGCACTTACATTAGAGAAT+TGG | + | chr7_4:4205789-4205808 | None:intergenic | 30.0% | |
CATTAAACTTAGGAGACTTT+CGG | - | chr7_4:4205901-4205920 | Msa1136140:intron | 30.0% | |
ATGTATCATTCAGTTGACTA+TGG | + | chr7_4:4205967-4205986 | None:intergenic | 30.0% | |
CTGAATGATACATACATGTT+AGG | - | chr7_4:4205974-4205993 | Msa1136140:intron | 30.0% | |
AAAAACCAAACCAAACTATG+CGG | + | chr7_4:4206020-4206039 | None:intergenic | 30.0% | |
! | CTATCCAATGCTTTAAGTAA+AGG | + | chr7_4:4206181-4206200 | None:intergenic | 30.0% |
!! | CTTTACTTAAAGCATTGGAT+AGG | - | chr7_4:4206179-4206198 | Msa1136140:intron | 30.0% |
! | TGTTTTATATTAACCACAGC+TGG | - | chr7_4:4206292-4206311 | Msa1136140:intron | 30.0% |
TATGCATCAATGGCTATAAT+TGG | - | chr7_4:4206316-4206335 | Msa1136140:intron | 30.0% | |
AATAGCAATATACACAACCT+TGG | - | chr7_4:4206411-4206430 | Msa1136140:intron | 30.0% | |
CTATTATTCTTGTATGTCCT+TGG | + | chr7_4:4206502-4206521 | None:intergenic | 30.0% | |
AATATTTGTAGCTATAGCAG+TGG | - | chr7_4:4206726-4206745 | Msa1136140:intron | 30.0% | |
ATATTTGTAGCTATAGCAGT+GGG | - | chr7_4:4206727-4206746 | Msa1136140:intron | 30.0% | |
TAGTTGTTGAGTTTATCCAA+TGG | + | chr7_4:4206895-4206914 | None:intergenic | 30.0% | |
! | CTATTTTGTTAGGAATGTGT+AGG | - | chr7_4:4206912-4206931 | Msa1136140:CDS | 30.0% |
CGTATGACTGATACTTTATT+CGG | + | chr7_4:4206947-4206966 | None:intergenic | 30.0% | |
GAATTGGCCAAAATCAAAAT+AGG | + | chr7_4:4206979-4206998 | None:intergenic | 30.0% | |
CTGAAGTTTCGAAATCTGAA+AGG | + | chr7_4:4203131-4203150 | None:intergenic | 35.0% | |
!! | TTGTTGATGGCAAAAAACCT+AGG | + | chr7_4:4203180-4203199 | None:intergenic | 35.0% |
!! | GAGGACTTTTTCTGACATAT+TGG | + | chr7_4:4203214-4203233 | None:intergenic | 35.0% |
AACTTCCACTCAGATAGTAA+TGG | + | chr7_4:4203258-4203277 | None:intergenic | 35.0% | |
TTACTATCTGAGTGGAAGTT+AGG | - | chr7_4:4203258-4203277 | Msa1136140:three_prime_UTR | 35.0% | |
TATGACTTTCTCCTCATCTA+TGG | + | chr7_4:4203289-4203308 | None:intergenic | 35.0% | |
! | AATGGACTCAATGCAATTTC+AGG | - | chr7_4:4203360-4203379 | Msa1136140:three_prime_UTR | 35.0% |
!! | GCATCTTACAAGTGTTTTTG+TGG | - | chr7_4:4203550-4203569 | Msa1136140:CDS | 35.0% |
GATATAGAGCTCATTTGGAA+AGG | + | chr7_4:4203959-4203978 | None:intergenic | 35.0% | |
! | ATTTGGAGTAGGTGAATGAT+AGG | - | chr7_4:4204182-4204201 | Msa1136140:intron | 35.0% |
! | TTTGGAGTAGGTGAATGATA+GGG | - | chr7_4:4204183-4204202 | Msa1136140:intron | 35.0% |
AGCTATCAAGGATATGTATG+AGG | - | chr7_4:4204267-4204286 | Msa1136140:intron | 35.0% | |
GCTATCAAGGATATGTATGA+GGG | - | chr7_4:4204268-4204287 | Msa1136140:intron | 35.0% | |
TATTGTTATGGGACAATCGT+TGG | + | chr7_4:4204329-4204348 | None:intergenic | 35.0% | |
AACGATTGTCCCATAACAAT+AGG | - | chr7_4:4204328-4204347 | Msa1136140:intron | 35.0% | |
! | ATAGATGATGTAGTCTTGCT+TGG | - | chr7_4:4204451-4204470 | Msa1136140:CDS | 35.0% |
TAGAAGCAAGACAGGATATA+TGG | - | chr7_4:4204549-4204568 | Msa1136140:CDS | 35.0% | |
AAGACGAAAAAGATCTACCA+TGG | - | chr7_4:4204588-4204607 | Msa1136140:CDS | 35.0% | |
GGATCCATAATACAACATGA+TGG | - | chr7_4:4204664-4204683 | Msa1136140:CDS | 35.0% | |
!!! | GACTTTGATTTTTCAGGTGT+TGG | - | chr7_4:4205175-4205194 | Msa1136140:intron | 35.0% |
AATGCAAGTTCACCTATATC+AGG | + | chr7_4:4205340-4205359 | None:intergenic | 35.0% | |
GATATAGGTGAACTTGCATT+TGG | - | chr7_4:4205340-4205359 | Msa1136140:intron | 35.0% | |
AATGTACACAGAGCTATACT+TGG | - | chr7_4:4205393-4205412 | Msa1136140:intron | 35.0% | |
GAGCTATACTTGGTTTCAAT+TGG | - | chr7_4:4205403-4205422 | Msa1136140:intron | 35.0% | |
CTTTCTTATGTATCTGCAAG+TGG | - | chr7_4:4205577-4205596 | Msa1136140:intron | 35.0% | |
ACTGCAACATTTGATGGAAT+TGG | - | chr7_4:4205640-4205659 | Msa1136140:intron | 35.0% | |
! | TGGAATTGGTGTTCATCAAA+AGG | - | chr7_4:4205654-4205673 | Msa1136140:intron | 35.0% |
! | GGAATTGGTGTTCATCAAAA+GGG | - | chr7_4:4205655-4205674 | Msa1136140:intron | 35.0% |
TCATGGAATTGTAGAGAGTA+GGG | + | chr7_4:4205756-4205775 | None:intergenic | 35.0% | |
TTCATGGAATTGTAGAGAGT+AGG | + | chr7_4:4205757-4205776 | None:intergenic | 35.0% | |
! | GAATTGGTGTTTGTTCTTCA+TGG | + | chr7_4:4205773-4205792 | None:intergenic | 35.0% |
CTTGAGTAGTTGAGTTCAAA+AGG | - | chr7_4:4205861-4205880 | Msa1136140:intron | 35.0% | |
GATACATACATGTTAGGTCA+TGG | - | chr7_4:4205980-4205999 | Msa1136140:intron | 35.0% | |
TTTGGATATTGGATTCACCA+AGG | + | chr7_4:4206431-4206450 | None:intergenic | 35.0% | |
TGTTGCCATCAATGCAAATT+TGG | + | chr7_4:4206449-4206468 | None:intergenic | 35.0% | |
!! | CAATAACAGTGCTGATTACA+AGG | + | chr7_4:4206552-4206571 | None:intergenic | 35.0% |
!! | TTCCATGTTTGTGTTACTTG+AGG | - | chr7_4:4206650-4206669 | Msa1136140:intron | 35.0% |
ATCCTCAAGTAACACAAACA+TGG | + | chr7_4:4206655-4206674 | None:intergenic | 35.0% | |
!! | TTGTGTTACTTGAGGATTTC+TGG | - | chr7_4:4206658-4206677 | Msa1136140:intron | 35.0% |
! | TGAGGATTTCTGGAAGTTAT+AGG | - | chr7_4:4206668-4206687 | Msa1136140:intron | 35.0% |
AGCAGAGATATACATGAGAA+TGG | + | chr7_4:4206826-4206845 | None:intergenic | 35.0% | |
ACGTCATTGGATAAACTCAA+CGG | + | chr7_4:4206859-4206878 | None:intergenic | 35.0% | |
ACTGATACTTTATTCGGATC+AGG | + | chr7_4:4206941-4206960 | None:intergenic | 35.0% | |
!!! | ACGATGGCCTATTTTGATTT+TGG | - | chr7_4:4206969-4206988 | Msa1136140:CDS | 35.0% |
GGAAGAAGCAGAATTGTTGA+TGG | + | chr7_4:4203193-4203212 | None:intergenic | 40.0% | |
GTAATGGCACATTTAAGGGT+GGG | + | chr7_4:4203242-4203261 | None:intergenic | 40.0% | |
AGTAATGGCACATTTAAGGG+TGG | + | chr7_4:4203243-4203262 | None:intergenic | 40.0% | |
! | ATGTGCCATTACTATCTGAG+TGG | - | chr7_4:4203250-4203269 | Msa1136140:three_prime_UTR | 40.0% |
GTTAGGACATTCCATAGATG+AGG | - | chr7_4:4203275-4203294 | Msa1136140:three_prime_UTR | 40.0% | |
GATCTCATTCAGCAGTTGTA+TGG | - | chr7_4:4203450-4203469 | Msa1136140:CDS | 40.0% | |
ATGGCACGACAAATATATGC+TGG | - | chr7_4:4203469-4203488 | Msa1136140:CDS | 40.0% | |
TGAAAGCCCTAGAGAAGAAA+GGG | - | chr7_4:4204223-4204242 | Msa1136140:intron | 40.0% | |
TGGGGCAATCCTATTGTTAT+GGG | + | chr7_4:4204340-4204359 | None:intergenic | 40.0% | |
TTGGGGCAATCCTATTGTTA+TGG | + | chr7_4:4204341-4204360 | None:intergenic | 40.0% | |
ATAACAATAGGATTGCCCCA+AGG | - | chr7_4:4204340-4204359 | Msa1136140:intron | 40.0% | |
TAACAATAGGATTGCCCCAA+GGG | - | chr7_4:4204341-4204360 | Msa1136140:intron | 40.0% | |
TGCTAACTCTTGGATGTGTT+TGG | + | chr7_4:4204413-4204432 | None:intergenic | 40.0% | |
AGTCGAGGGAGAAATTGAAT+GGG | - | chr7_4:4204476-4204495 | Msa1136140:CDS | 40.0% | |
TGAATGGGAGGCTATAGATT+TGG | - | chr7_4:4204491-4204510 | Msa1136140:CDS | 40.0% | |
ATCCTGTCTTGCTTCTAATC+AGG | + | chr7_4:4204546-4204565 | None:intergenic | 40.0% | |
ACGAAAAAGATCTACCATGG+AGG | - | chr7_4:4204591-4204610 | Msa1136140:CDS | 40.0% | |
!! | AAGCCTTATTCCACTAAGAG+GGG | + | chr7_4:4204870-4204889 | None:intergenic | 40.0% |
!! | CAAGCCTTATTCCACTAAGA+GGG | + | chr7_4:4204871-4204890 | None:intergenic | 40.0% |
! | TGAGGGAGTGTAACTTTCAT+AGG | - | chr7_4:4205031-4205050 | Msa1136140:intron | 40.0% |
! | AGTTCCATATGCATTAGCCT+CGG | - | chr7_4:4205207-4205226 | Msa1136140:intron | 40.0% |
! | TCATGGACTGCAACATTTGA+TGG | - | chr7_4:4205634-4205653 | Msa1136140:intron | 40.0% |
TTGTAGAGAGTAGGGAAAAC+TGG | + | chr7_4:4205748-4205767 | None:intergenic | 40.0% | |
ACTGAATGAACCGCATAGTT+TGG | - | chr7_4:4206007-4206026 | Msa1136140:intron | 40.0% | |
ATGAACCGCATAGTTTGGTT+TGG | - | chr7_4:4206012-4206031 | Msa1136140:intron | 40.0% | |
GACAGTGCTCACAAACATAT+TGG | + | chr7_4:4206530-4206549 | None:intergenic | 40.0% | |
CAGCACTGTTATTGTTGCAT+TGG | - | chr7_4:4206558-4206577 | Msa1136140:intron | 40.0% | |
GACATGAGAGATCCAAAGAA+AGG | + | chr7_4:4206589-4206608 | None:intergenic | 40.0% | |
CTTTGGATCTCTCATGTCAT+TGG | - | chr7_4:4206591-4206610 | Msa1136140:intron | 40.0% | |
CTATAGCAGTGGGAATTTCT+GGG | - | chr7_4:4206737-4206756 | Msa1136140:intron | 40.0% | |
GTATATCTCTGCTAGAATCC+CGG | - | chr7_4:4206833-4206852 | Msa1136140:CDS | 40.0% | |
TCACTAGAGTTCAACGTCAT+TGG | + | chr7_4:4206872-4206891 | None:intergenic | 40.0% | |
!! | CATTTAAGGGTGGGTTGTTG+AGG | + | chr7_4:4203233-4203252 | None:intergenic | 45.0% |
GTGAAAGCCCTAGAGAAGAA+AGG | - | chr7_4:4204222-4204241 | Msa1136140:intron | 45.0% | |
GAAAGCCCTAGAGAAGAAAG+GGG | - | chr7_4:4204224-4204243 | Msa1136140:intron | 45.0% | |
CTAGTCCCCTTTCTTCTCTA+GGG | + | chr7_4:4204232-4204251 | None:intergenic | 45.0% | |
AGTAAGAAGGTGAGGGCTTA+GGG | + | chr7_4:4204371-4204390 | None:intergenic | 45.0% | |
AAGTAAGAAGGTGAGGGCTT+AGG | + | chr7_4:4204372-4204391 | None:intergenic | 45.0% | |
ACACATCCAAGAGTTAGCAC+TGG | - | chr7_4:4204414-4204433 | Msa1136140:CDS | 45.0% | |
CACATCCAAGAGTTAGCACT+GGG | - | chr7_4:4204415-4204434 | Msa1136140:CDS | 45.0% | |
TACATCCCAGTGCTAACTCT+TGG | + | chr7_4:4204423-4204442 | None:intergenic | 45.0% | |
GAGTCGAGGGAGAAATTGAA+TGG | - | chr7_4:4204475-4204494 | Msa1136140:CDS | 45.0% | |
CTGTCTTGCTTCTAATCAGG+CGG | + | chr7_4:4204543-4204562 | None:intergenic | 45.0% | |
TCTACCATGGAGGTGAAAGT+TGG | - | chr7_4:4204601-4204620 | Msa1136140:CDS | 45.0% | |
ATCTCCAACTTTCACCTCCA+TGG | + | chr7_4:4204608-4204627 | None:intergenic | 45.0% | |
CTTATTCCACTAAGAGGGGT+CGG | + | chr7_4:4204866-4204885 | None:intergenic | 45.0% | |
!! | CCAAGCCTTATTCCACTAAG+AGG | + | chr7_4:4204872-4204891 | None:intergenic | 45.0% |
CCTCTTAGTGGAATAAGGCT+TGG | - | chr7_4:4204869-4204888 | Msa1136140:CDS | 45.0% | |
! | GTTCCATATGCATTAGCCTC+GGG | - | chr7_4:4205208-4205227 | Msa1136140:intron | 45.0% |
TAAACTTAACCATCCTCCCG+AGG | + | chr7_4:4205227-4205246 | None:intergenic | 45.0% | |
GCATACAAGCTAACAGCTGT+TGG | + | chr7_4:4205706-4205725 | None:intergenic | 45.0% | |
CTTAGGAGACTTTCGGATCA+TGG | - | chr7_4:4205908-4205927 | Msa1136140:intron | 45.0% | |
CATTGATGCATAACCAGCTG+TGG | + | chr7_4:4206308-4206327 | None:intergenic | 45.0% | |
CACAGCTGGTTATGCATCAA+TGG | - | chr7_4:4206306-4206325 | Msa1136140:intron | 45.0% | |
!! | GCATTGGCTGTTCCTTTCTT+TGG | - | chr7_4:4206574-4206593 | Msa1136140:intron | 45.0% |
GGATCTCTCATGTCATTGGT+TGG | - | chr7_4:4206595-4206614 | Msa1136140:intron | 45.0% | |
! | GAAGTTTGAGTTCGAGACAG+TGG | - | chr7_4:4206690-4206709 | Msa1136140:intron | 45.0% |
GCTATAGCAGTGGGAATTTC+TGG | - | chr7_4:4206736-4206755 | Msa1136140:intron | 45.0% | |
ATTGGATAAACTCAACGGCC+GGG | + | chr7_4:4206854-4206873 | None:intergenic | 45.0% | |
CATTGGATAAACTCAACGGC+CGG | + | chr7_4:4206855-4206874 | None:intergenic | 45.0% | |
CGTTGAACTCTAGTGACCAT+TGG | - | chr7_4:4206876-4206895 | Msa1136140:CDS | 45.0% | |
GTATCAGTCATACGTGACGA+TGG | - | chr7_4:4206953-4206972 | Msa1136140:CDS | 45.0% | |
!!! | AATAAATTTGTATTTTTTTT+GGG | + | chr7_4:4203902-4203921 | None:intergenic | 5.0% |
!!! | AAATAAATTTGTATTTTTTT+TGG | + | chr7_4:4203903-4203922 | None:intergenic | 5.0% |
CCTAGTCCCCTTTCTTCTCT+AGG | + | chr7_4:4204233-4204252 | None:intergenic | 50.0% | |
CCTAGAGAAGAAAGGGGACT+AGG | - | chr7_4:4204230-4204249 | Msa1136140:intron | 50.0% | |
AGGGAACTTCGACTAGTGTG+AGG | - | chr7_4:4204287-4204306 | Msa1136140:intron | 50.0% | |
AGGGCTTAGGGTTTACCCTT+GGG | + | chr7_4:4204359-4204378 | None:intergenic | 50.0% | |
! | TAGTCTTGCTTGGAGAGTCG+AGG | - | chr7_4:4204461-4204480 | Msa1136140:CDS | 50.0% |
AGTCTTGCTTGGAGAGTCGA+GGG | - | chr7_4:4204462-4204481 | Msa1136140:CDS | 50.0% | |
CGAGGGAGAAATTGAATGGG+AGG | - | chr7_4:4204479-4204498 | Msa1136140:CDS | 50.0% | |
CGCCTGATTAGAAGCAAGAC+AGG | - | chr7_4:4204541-4204560 | Msa1136140:CDS | 50.0% | |
CGACCCCTCTTAGTGGAATA+AGG | - | chr7_4:4204864-4204883 | Msa1136140:CDS | 50.0% | |
! | GCAGCAGCAGCATTTTACTC+AGG | - | chr7_4:4205265-4205284 | Msa1136140:intron | 50.0% |
GCAAGTGGTGTGTTTGCTTC+TGG | - | chr7_4:4205592-4205611 | Msa1136140:intron | 50.0% | |
GTTCGAGACAGTGGCAATTG+TGG | - | chr7_4:4206699-4206718 | Msa1136140:intron | 50.0% | |
TTCGACTAGTGTGAGGACGC+AGG | - | chr7_4:4204294-4204313 | Msa1136140:intron | 55.0% | |
ACTAGTGTGAGGACGCAGGA+TGG | - | chr7_4:4204298-4204317 | Msa1136140:intron | 55.0% | |
CTAGTGTGAGGACGCAGGAT+GGG | - | chr7_4:4204299-4204318 | Msa1136140:intron | 55.0% | |
TAGTGTGAGGACGCAGGATG+GGG | - | chr7_4:4204300-4204319 | Msa1136140:intron | 55.0% | |
GGGCTTAGGGTTTACCCTTG+GGG | + | chr7_4:4204358-4204377 | None:intergenic | 55.0% | |
GAGGGCTTAGGGTTTACCCT+TGG | + | chr7_4:4204360-4204379 | None:intergenic | 55.0% | |
GCGGAAGTCACACGCTTCTA+AGG | + | chr7_4:4204524-4204543 | None:intergenic | 55.0% | |
ACTAAGAGGGGTCGGCTACA+TGG | + | chr7_4:4204858-4204877 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCTCTTAG+TGG | - | chr7_4:4204857-4204876 | Msa1136140:CDS | 55.0% | |
CCTCCCGAGGCTAATGCATA+TGG | + | chr7_4:4205214-4205233 | None:intergenic | 55.0% | |
! | CCATATGCATTAGCCTCGGG+AGG | - | chr7_4:4205211-4205230 | Msa1136140:intron | 55.0% |
! | ATGCATTAGCCTCGGGAGGA+TGG | - | chr7_4:4205215-4205234 | Msa1136140:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 4203104 | 4207104 | 4203104 | ID=Msa1136140;Name=Msa1136140 |
chr7_4 | mRNA | 4203104 | 4207104 | 4203104 | ID=Msa1136140-mRNA-1;Parent=Msa1136140;Name=Msa1136140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=112|1|1|1|1|1|3|306|430 |
chr7_4 | exon | 4203104 | 4203928 | 4203104 | ID=Msa1136140-mRNA-1:exon:1137;Parent=Msa1136140-mRNA-1 |
chr7_4 | exon | 4204410 | 4205017 | 4204410 | ID=Msa1136140-mRNA-1:exon:1136;Parent=Msa1136140-mRNA-1 |
chr7_4 | exon | 4206827 | 4207104 | 4206827 | ID=Msa1136140-mRNA-1:exon:1135;Parent=Msa1136140-mRNA-1 |
chr7_4 | five_prime_UTR | 4206993 | 4207104 | 4206993 | ID=Msa1136140-mRNA-1:five_prime_utr;Parent=Msa1136140-mRNA-1 |
chr7_4 | CDS | 4206827 | 4206992 | 4206827 | ID=Msa1136140-mRNA-1:cds;Parent=Msa1136140-mRNA-1 |
chr7_4 | CDS | 4204410 | 4205017 | 4204410 | ID=Msa1136140-mRNA-1:cds;Parent=Msa1136140-mRNA-1 |
chr7_4 | CDS | 4203410 | 4203928 | 4203410 | ID=Msa1136140-mRNA-1:cds;Parent=Msa1136140-mRNA-1 |
chr7_4 | three_prime_UTR | 4203104 | 4203409 | 4203104 | ID=Msa1136140-mRNA-1:three_prime_utr;Parent=Msa1136140-mRNA-1 |
Gene Sequence |
Protein sequence |