AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0290650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290650 MtrunA17_Chr2g0310011 90.160 376 5 3 1 372 1 348 0.0 679
Msa0290650 MtrunA17_Chr8g0356501 63.144 388 84 17 1 372 1 345 3.55e-144 412
Msa0290650 MtrunA17_Chr6g0461641 56.098 164 56 2 28 175 35 198 1.87e-52 179
Msa0290650 MtrunA17_Chr2g0321461 55.882 170 53 4 25 173 35 203 1.15e-51 176
Msa0290650 MtrunA17_Chr5g0417521 55.414 157 58 2 28 172 8 164 1.44e-49 170
Msa0290650 MtrunA17_Chr4g0042451 56.410 156 53 3 28 170 10 163 1.46e-49 169
Msa0290650 MtrunA17_Chr5g0409731 53.374 163 58 5 22 168 10 170 3.39e-49 167
Msa0290650 MtrunA17_Chr1g0197171 51.977 177 73 4 14 180 23 197 1.70e-47 163
Msa0290650 MtrunA17_Chr2g0290991 50.877 171 69 4 23 180 27 195 3.33e-44 155
Msa0290650 MtrunA17_Chr7g0254981 54.605 152 54 5 35 178 50 194 9.59e-44 152
Msa0290650 MtrunA17_Chr2g0291021 57.971 138 55 2 35 170 49 185 1.54e-42 151
Msa0290650 MtrunA17_Chr7g0261911 50.370 135 55 3 35 163 262 390 7.23e-36 136
Msa0290650 MtrunA17_Chr7g0274471 43.038 158 76 3 35 186 218 367 3.00e-34 131
Msa0290650 MtrunA17_Chr1g0190301 44.218 147 66 3 25 163 165 303 4.87e-34 129
Msa0290650 MtrunA17_Chr1g0175091 44.526 137 74 1 31 167 254 388 3.40e-31 122
Msa0290650 MtrunA17_Chr7g0258551 37.572 173 102 3 31 198 208 379 3.82e-29 116
Msa0290650 MtrunA17_Chr7g0242521 47.287 129 64 2 35 160 13 140 4.60e-28 110
Msa0290650 MtrunA17_Chr1g0175071 38.961 154 83 3 25 173 167 314 1.26e-23 99.8
Msa0290650 MtrunA17_Chr3g0095611 61.111 54 21 0 35 88 19 72 6.36e-16 75.9
Msa0290650 MtrunA17_Chr6g0479431 56.667 60 26 0 36 95 203 262 2.06e-15 77.0
Msa0290650 MtrunA17_Chr7g0243081 44.444 81 45 0 11 91 47 127 2.56e-15 76.3
Msa0290650 MtrunA17_Chr2g0288601 61.111 54 21 0 36 89 72 125 2.82e-15 72.0
Msa0290650 MtrunA17_Chr1g0210911 56.452 62 22 1 36 92 23 84 3.68e-15 75.9
Msa0290650 MtrunA17_Chr1g0154261 46.667 75 40 0 36 110 127 201 4.78e-15 75.1
Msa0290650 MtrunA17_Chr1g0162931 38.261 115 52 2 36 135 19 129 4.83e-15 74.7
Msa0290650 MtrunA17_Chr8g0366281 58.929 56 23 0 36 91 174 229 5.98e-15 75.5
Msa0290650 MtrunA17_Chr3g0109981 50.704 71 35 0 36 106 275 345 7.85e-15 75.5
Msa0290650 MtrunA17_Chr5g0410741 58.929 56 23 0 36 91 220 275 8.38e-15 75.1
Msa0290650 MtrunA17_Chr1g0175081 49.091 55 28 0 37 91 24 78 9.88e-15 69.7
Msa0290650 MtrunA17_Chr8g0379121 53.571 56 26 0 36 91 112 167 3.75e-14 73.6
Msa0290650 MtrunA17_Chr2g0320231 55.357 56 25 0 36 91 98 153 6.55e-14 72.4
Msa0290650 MtrunA17_Chr7g0258531 35.821 134 67 4 35 158 213 337 6.88e-14 72.0
Msa0290650 MtrunA17_Chr1g0161431 61.818 55 20 1 35 89 200 253 2.46e-13 71.2
Msa0290650 MtrunA17_Chr2g0283951 58.000 50 21 0 36 85 90 139 6.73e-13 69.3
Msa0290650 MtrunA17_Chr4g0031961 52.174 69 31 2 22 89 117 184 6.86e-13 68.9
Msa0290650 MtrunA17_Chr1g0198601 49.315 73 37 0 35 107 211 283 6.98e-13 69.3
Msa0290650 MtrunA17_Chr4g0067981 57.627 59 24 1 31 89 211 268 7.24e-13 70.1
Msa0290650 MtrunA17_Chr5g0402631 51.316 76 34 1 35 110 214 286 1.14e-12 68.6
Msa0290650 MtrunA17_Chr2g0294911 53.333 60 27 1 30 89 206 264 1.15e-12 69.3
Msa0290650 MtrunA17_Chr7g0255711 60.000 55 21 1 35 89 91 144 1.74e-12 67.4
Msa0290650 MtrunA17_Chr4g0009901 52.542 59 27 1 31 89 164 221 9.80e-12 65.1
Msa0290650 MtrunA17_Chr5g0422621 58.182 55 23 0 35 89 198 252 1.31e-11 65.5
Msa0290650 MtrunA17_Chr1g0149841 52.542 59 27 1 31 89 187 244 4.02e-11 64.3
Msa0290650 MtrunA17_Chr4g0009981 53.448 58 26 1 31 88 112 168 4.96e-11 62.8
Msa0290650 MtrunA17_Chr4g0045361 55.172 58 26 0 32 89 271 328 5.02e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290650 AT1G79430.2 56.122 392 115 16 4 372 1 358 4.91e-121 354
Msa0290650 AT1G79430.1 50.459 327 107 15 67 372 1 293 6.32e-78 242
Msa0290650 AT3G12730.1 70.395 152 37 3 24 167 12 163 8.32e-68 214
Msa0290650 AT4G13640.1 66.667 165 41 3 25 176 27 190 1.39e-65 210
Msa0290650 AT3G24120.1 68.987 158 35 3 24 168 30 186 8.58e-65 208
Msa0290650 AT4G13640.2 65.476 168 41 4 25 176 27 193 1.80e-63 205
Msa0290650 AT3G24120.2 67.702 161 35 4 24 168 30 189 1.14e-62 202
Msa0290650 AT3G04030.3 60.355 169 50 4 24 176 34 201 5.30e-57 191
Msa0290650 AT5G18240.1 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0290650 AT5G18240.4 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0290650 AT3G04030.2 59.172 169 51 5 24 176 34 200 6.06e-54 183
Msa0290650 AT5G18240.5 59.524 168 51 4 24 176 34 199 6.58e-53 180
Msa0290650 AT3G04030.1 57.396 169 49 5 24 176 34 195 1.45e-50 174
Msa0290650 AT5G18240.2 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0290650 AT5G18240.3 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0290650 AT1G69580.1 46.341 205 81 6 27 212 26 220 3.04e-49 169
Msa0290650 AT1G69580.2 46.117 206 81 6 27 212 26 221 4.37e-49 169
Msa0290650 AT5G45580.2 46.914 162 68 2 25 168 13 174 2.43e-43 152
Msa0290650 AT2G01060.1 56.934 137 57 2 35 170 15 150 6.66e-43 151
Msa0290650 AT5G45580.1 47.273 165 65 3 29 171 1 165 2.94e-42 149
Msa0290650 AT3G12730.2 62.385 109 33 3 67 167 1 109 3.42e-37 133
Msa0290650 AT3G13040.3 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0290650 AT3G13040.1 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0290650 AT3G13040.2 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0290650 AT5G29000.1 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0290650 AT5G29000.3 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0290650 AT4G28610.1 44.928 138 59 3 35 163 225 354 2.64e-32 125
Msa0290650 AT5G29000.2 41.520 171 82 5 35 196 231 392 3.07e-32 125
Msa0290650 AT5G06800.1 47.287 129 67 1 35 163 192 319 1.92e-31 122
Msa0290650 AT3G04450.4 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0290650 AT3G04450.2 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0290650 AT5G06800.2 45.522 134 67 2 35 163 192 324 4.49e-31 122
Msa0290650 AT3G04450.1 41.935 155 73 4 35 180 238 384 6.55e-31 122
Msa0290650 AT3G04030.5 54.762 126 40 4 67 176 1 125 6.35e-30 117
Msa0290650 AT2G20400.1 42.177 147 79 3 35 178 231 374 1.13e-26 110
Msa0290650 AT2G20400.2 41.497 147 81 2 35 178 231 375 3.01e-26 108
Msa0290650 AT3G04030.4 50.794 126 39 5 67 176 1 119 9.94e-24 100
Msa0290650 AT5G18240.6 50.400 125 41 4 67 176 1 119 4.38e-23 98.6
Msa0290650 AT2G06020.1 59.375 64 26 0 28 91 79 142 8.32e-21 92.0
Msa0290650 AT2G01060.2 49.020 102 50 2 70 170 1 101 8.71e-21 90.5
Msa0290650 AT5G06800.3 59.649 57 23 0 35 91 192 248 3.17e-18 84.3
Msa0290650 AT5G29000.4 57.895 57 24 0 35 91 231 287 2.84e-17 82.0
Msa0290650 AT3G04450.3 56.140 57 25 0 35 91 238 294 3.04e-17 82.0
Msa0290650 AT1G14600.1 50.685 73 31 1 21 88 4 76 2.07e-16 78.6
Msa0290650 AT2G40260.1 60.714 56 22 0 36 91 83 138 7.94e-16 79.0
Msa0290650 AT4G04605.1 58.491 53 22 0 36 88 15 67 1.01e-15 75.9
Msa0290650 AT2G42660.1 58.929 56 23 0 36 91 51 106 1.10e-15 76.6
Msa0290650 AT2G02060.2 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0290650 AT2G02060.1 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0290650 AT1G32240.2 56.667 60 26 0 36 95 214 273 6.42e-15 75.9
Msa0290650 AT5G16560.1 56.667 60 26 0 36 95 220 279 6.45e-15 75.9
Msa0290650 AT1G32240.1 56.667 60 26 0 36 95 214 273 7.98e-15 75.5
Msa0290650 AT2G38300.1 57.143 56 24 0 36 91 55 110 1.56e-14 74.3
Msa0290650 AT5G42630.2 57.143 56 24 0 36 91 106 161 1.74e-14 72.4
Msa0290650 AT5G42630.1 57.143 56 24 0 36 91 106 161 2.37e-14 73.2
Msa0290650 AT4G17695.1 53.333 60 28 0 36 95 165 224 5.18e-14 72.8
Msa0290650 AT3G46640.2 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0290650 AT3G46640.1 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0290650 AT3G46640.3 54.286 70 28 2 23 89 129 197 2.76e-13 70.5
Msa0290650 AT5G59570.2 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0290650 AT5G59570.1 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0290650 AT4G04580.1 49.123 57 29 0 36 92 15 71 6.80e-13 66.6
Msa0290650 AT5G05090.1 60.000 55 21 1 35 89 81 134 7.74e-13 68.6
Msa0290650 AT3G10760.1 60.000 55 21 1 35 89 105 158 9.84e-13 68.9
Msa0290650 AT4G37180.1 55.172 58 26 0 37 94 212 269 1.37e-12 68.6
Msa0290650 AT4G37180.2 55.172 58 26 0 37 94 219 276 1.57e-12 68.6
Msa0290650 AT2G40970.1 60.000 55 21 1 35 89 105 158 2.27e-12 67.0
Msa0290650 AT1G49560.1 48.235 85 40 1 35 119 192 272 6.59e-12 66.6
Msa0290650 AT3G16857.3 56.364 55 23 1 35 89 167 220 6.69e-12 67.4
Msa0290650 AT3G16857.2 56.364 55 23 1 35 89 237 290 7.67e-12 67.4
Msa0290650 AT3G16857.1 56.364 55 23 1 35 89 237 290 7.69e-12 67.4
Msa0290650 AT5G58080.1 55.172 58 25 1 32 89 191 247 8.33e-12 67.0
Msa0290650 AT3G25790.1 60.000 50 20 0 40 89 201 250 8.39e-12 66.2
Msa0290650 AT2G01760.3 54.545 55 24 1 35 89 135 188 1.05e-11 65.9
Msa0290650 AT2G01760.1 54.545 55 24 1 35 89 200 253 1.92e-11 65.5
Msa0290650 AT2G01760.2 54.545 55 24 1 35 89 228 281 2.86e-11 65.1
Msa0290650 AT5G44190.1 55.556 54 23 1 35 88 147 199 4.85e-11 64.3
Msa0290650 AT5G44190.2 55.556 54 23 1 35 88 147 199 5.91e-11 63.5
Msa0290650 AT1G13300.1 54.545 55 25 0 35 89 181 235 8.72e-11 63.2

Find 111 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGACTATTGAAAGAATT+TGG 0.175321 2_3:-38331040 Msa0290650:CDS
GATTTAAGGCTTCAAGATTT+AGG 0.193912 2_3:-38330800 Msa0290650:CDS
TGCTACAACTAATAACTTAA+AGG 0.195092 2_3:-38331095 Msa0290650:CDS
CTTTGTTGTGAAACTCTCTT+AGG 0.204487 2_3:-38330440 Msa0290650:three_prime_UTR
TAATGTGGAGTGATGATTTA+AGG 0.215191 2_3:-38330814 Msa0290650:CDS
AAATCATCACTCCACATTAA+TGG 0.218919 2_3:+38330818 None:intergenic
TTTCTATTACATAGAAATTT+AGG 0.227246 2_3:-38331992 Msa0290650:intron
TTCATAGTTGAAGGCTTCTT+TGG 0.249952 2_3:+38332634 None:intergenic
AACAAATGCGGATGCAAAAT+AGG 0.252816 2_3:+38332706 None:intergenic
AACTTAAAGGGCGTTGTTCT+TGG 0.261188 2_3:-38331082 Msa0290650:CDS
CCACTATAAGGGTTAGTGTT+AGG 0.267537 2_3:+38330854 None:intergenic
GCATATATGCATGATGATCT+AGG 0.285163 2_3:+38330918 None:intergenic
ATTTAAGGCTTCAAGATTTA+GGG 0.292742 2_3:-38330799 Msa0290650:CDS
AATCATCACTCCACATTAAT+GGG 0.299412 2_3:+38330819 None:intergenic
TAAAACTATCATGAGGGTTA+TGG 0.306320 2_3:-38332353 Msa0290650:CDS
GAAATACATGCAAAGTATAT+TGG 0.312337 2_3:-38331158 Msa0290650:CDS
ATTCAATGATCACTCAATTA+AGG 0.327183 2_3:-38331946 Msa0290650:CDS
GTCCAACGAAGACGAGGTTT+TGG 0.340512 2_3:+38332553 None:intergenic
TCAAATTGCACCACCATCAT+TGG 0.344106 2_3:-38330732 Msa0290650:CDS
CCATCTCAAGAGCCATCTTC+AGG 0.344761 2_3:-38332308 Msa0290650:intron
TGAAGAGATGGCCCTCTTCT+TGG 0.346647 2_3:+38330593 None:intergenic
TATGATTAGTACTGGTACTA+TGG 0.347038 2_3:-38330552 Msa0290650:CDS
CACTATAAGGGTTAGTGTTA+GGG 0.355596 2_3:+38330855 None:intergenic
AAAGCTTATCAGACACTTGC+AGG 0.356175 2_3:-38331133 Msa0290650:CDS
GCTTCCTCTTCGGCTATGAT+TGG 0.358723 2_3:-38331767 Msa0290650:CDS
ACCTCATGGAATGGCTGAAA+TGG 0.378868 2_3:-38331059 Msa0290650:CDS
GAGCTTCAATTCGTAGTTGA+AGG 0.381017 2_3:+38331185 None:intergenic
AAAACTATCATGAGGGTTAT+GGG 0.387308 2_3:-38332352 Msa0290650:CDS
AAAATTTCCCCTTGAAGTAA+AGG 0.387443 2_3:+38330665 None:intergenic
ACTAACCCTTATAGTGGAAA+TGG 0.388772 2_3:-38330848 Msa0290650:CDS
CAGCATCAACAAAACGTTCA+TGG 0.392478 2_3:+38332521 None:intergenic
CAAGGTAGAGGCTCACCATT+TGG 0.401119 2_3:-38330527 Msa0290650:CDS
GATACAAAGCCTTTACTTCA+AGG 0.414154 2_3:-38330674 Msa0290650:CDS
GAAATCATCATGTTCTTATG+AGG 0.415377 2_3:-38330399 Msa0290650:three_prime_UTR
TCATGTGAATTCATAGTTGA+AGG 0.417635 2_3:+38332625 None:intergenic
ACAAATGCGGATGCAAAATA+GGG 0.425308 2_3:+38332707 None:intergenic
CCTAACACTAACCCTTATAG+TGG 0.433462 2_3:-38330854 Msa0290650:CDS
GGCGTTGTTCTTGGACCTCA+TGG 0.435582 2_3:-38331073 Msa0290650:CDS
ATGAGGGTTATGGGTGTAAA+GGG 0.439033 2_3:-38332343 Msa0290650:CDS
GTTGATGCTGTTACTCAGCT+TGG 0.442902 2_3:-38332508 Msa0290650:CDS
ATGCAAAATAGGGAAGAATA+TGG 0.444532 2_3:+38332717 None:intergenic
CATGAGGGTTATGGGTGTAA+AGG 0.448006 2_3:-38332344 Msa0290650:CDS
AGGGACAGCTTCATCATGCT+TGG 0.454830 2_3:-38330780 Msa0290650:CDS
TTTGTTGTGAAACTCTCTTA+GGG 0.456419 2_3:-38330439 Msa0290650:three_prime_UTR
TTTGTATTCAAACCTGAAGA+TGG 0.457979 2_3:+38332296 None:intergenic
TAAGGGTTAGTGTTAGGGTT+AGG 0.458671 2_3:+38330860 None:intergenic
ACGGAATACTGCTTCCTCTT+CGG 0.462582 2_3:-38331777 Msa0290650:CDS
GCTACAACTAATAACTTAAA+GGG 0.463497 2_3:-38331094 Msa0290650:CDS
CATATATGCATGATGATCTA+GGG 0.467621 2_3:+38330919 None:intergenic
TGAAAAGATGTAAAACTAAG+AGG 0.472361 2_3:+38331013 None:intergenic
GTGATCATTGAATTCCTTGT+GGG 0.478768 2_3:+38331956 None:intergenic
ACTTAAGCCTTGGCAAGAAA+AGG 0.483728 2_3:-38330883 Msa0290650:CDS
ATAGTACCAGTACTAATCAT+AGG 0.485418 2_3:+38330554 None:intergenic
CACCACCACCGCCTCCGAAA+AGG 0.487952 2_3:+38330981 None:intergenic
ATAGTTGAAGGCTTCTTTGG+AGG 0.491992 2_3:+38332637 None:intergenic
ATAACTAATTCTCATCCAAA+TGG 0.494435 2_3:+38330512 None:intergenic
ATTACATAGAAATTTAGGCT+TGG 0.496295 2_3:-38331987 Msa0290650:intron
GATAGACCCATGTGTGTTCA+AGG 0.496295 2_3:-38332604 Msa0290650:CDS
CCTCATGGAATGGCTGAAAT+GGG 0.498758 2_3:-38331058 Msa0290650:CDS
ATACAAAGCCTTTACTTCAA+GGG 0.499005 2_3:-38330673 Msa0290650:CDS
TAGTTGAAGGCTTCTTTGGA+GGG 0.504455 2_3:+38332638 None:intergenic
GAAGAGAAAATGGAAGTGAA+TGG 0.505470 2_3:+38332752 None:intergenic
TGAATTTGATCACCTTTGAA+AGG 0.506520 2_3:+38330752 None:intergenic
CGTTAGAATAATTAAAACGT+TGG 0.509154 2_3:+38330362 None:intergenic
ATGGCTCTTGAGATGGTAAA+GGG 0.513730 2_3:+38332315 None:intergenic
CGGTATTCTCTTCACAGAGA+TGG 0.514178 2_3:-38332671 Msa0290650:exon
ATGAGTCCTATGATTAGTAC+TGG 0.525466 2_3:-38330560 Msa0290650:CDS
ACCCAAAACCTCGTCTTCGT+TGG 0.527604 2_3:-38332555 Msa0290650:CDS
GATGGCCCTCTTCTTGGTGA+GGG 0.531501 2_3:+38330599 None:intergenic
TACAAAGCCTTTACTTCAAG+GGG 0.533890 2_3:-38330672 Msa0290650:CDS
TCACTTCCTCTATCCAATGA+TGG 0.535417 2_3:+38330719 None:intergenic
GATGGCTCTTGAGATGGTAA+AGG 0.536000 2_3:+38332314 None:intergenic
TGTTCTTGGACCTCATGGAA+TGG 0.536570 2_3:-38331068 Msa0290650:CDS
AGATGGCCCTCTTCTTGGTG+AGG 0.537995 2_3:+38330598 None:intergenic
GCACCACCATCATTGGATAG+AGG 0.539525 2_3:-38330725 Msa0290650:CDS
ATCAATGAGAACTTAAGCCT+TGG 0.540269 2_3:-38330893 Msa0290650:CDS
ATGTGTGTTCAAGGTGACTC+AGG 0.543370 2_3:-38332595 Msa0290650:CDS
GGTACTATGGCACAAGGTAG+AGG 0.548888 2_3:-38330539 Msa0290650:CDS
CCTGAAGATGGCTCTTGAGA+TGG 0.549039 2_3:+38332308 None:intergenic
TGCTTGGATGATCCTTTCAA+AGG 0.557843 2_3:-38330764 Msa0290650:CDS
GATGCTGTTACTCAGCTTGG+AGG 0.559349 2_3:-38332505 Msa0290650:CDS
CAACTACGAATTGAAGCTCA+AGG 0.565636 2_3:-38331181 Msa0290650:CDS
ATGCATACTCATTCATGTTG+CGG 0.570245 2_3:+38331744 None:intergenic
ATTCTTTCAGCATGAAGAGA+TGG 0.571803 2_3:+38330581 None:intergenic
GACACTTGCAGGTGAAAACA+TGG 0.571973 2_3:-38331122 Msa0290650:CDS
CTTTGCTTTATACTTTGAGA+AGG 0.579123 2_3:-38332785 Msa0290650:five_prime_UTR
TGTTCTTATGAGGTATTGCA+TGG 0.579271 2_3:-38330389 Msa0290650:three_prime_UTR
CTTCAGCTTTAGAACTGCAA+CGG 0.582298 2_3:-38331796 Msa0290650:CDS
ACTTGACCTTCAACAAAACA+TGG 0.583014 2_3:-38330951 Msa0290650:CDS
TGAGTCACCTTGAACACACA+TGG 0.598179 2_3:+38332597 None:intergenic
GAAAGACCCTCACCAAGAAG+AGG 0.599610 2_3:-38330605 Msa0290650:CDS
AATGATCACTCAATTAAGGA+TGG 0.602702 2_3:-38331942 Msa0290650:intron
AAGTATAAAGCAAAGTGAGA+AGG 0.606762 2_3:+38332793 None:intergenic
CTAAGAGAGTTTCACAACAA+AGG 0.608999 2_3:+38330441 None:intergenic
AAAGACCCTCACCAAGAAGA+GGG 0.613710 2_3:-38330604 Msa0290650:CDS
GCTTGGAAAGCAACCCCACA+AGG 0.615422 2_3:-38331970 Msa0290650:CDS
CCACTCCTAAAACTATCATG+AGG 0.619863 2_3:-38332360 Msa0290650:CDS
TGATCATTGAATTCCTTGTG+GGG 0.623211 2_3:+38331957 None:intergenic
AACTACGAATTGAAGCTCAA+GGG 0.632870 2_3:-38331180 Msa0290650:CDS
CACTCCTAAAACTATCATGA+GGG 0.634268 2_3:-38332359 Msa0290650:CDS
CATTTGTTCTTGAATCTCTG+CGG 0.639752 2_3:-38332691 Msa0290650:five_prime_UTR
AGTGATCATTGAATTCCTTG+TGG 0.639862 2_3:+38331955 None:intergenic
TCAACAGTCCAACGAAGACG+AGG 0.644546 2_3:+38332547 None:intergenic
TGTAATCAGGATGCAAATTG+AGG 0.645996 2_3:-38331529 Msa0290650:intron
CCCATTTCAGCCATTCCATG+AGG 0.656331 2_3:+38331058 None:intergenic
CTTCCTCTATCCAATGATGG+TGG 0.659128 2_3:+38330722 None:intergenic
GCGGCCAATCATAGCCGAAG+AGG 0.663510 2_3:+38331763 None:intergenic
AAGACTACATGAGCAACTTG+AGG 0.669000 2_3:-38331499 Msa0290650:intron
CAGAGATTCAAGAACAAATG+CGG 0.674681 2_3:+38332694 None:intergenic
GAGTCACCTTGAACACACAT+GGG 0.682407 2_3:+38332598 None:intergenic
AGTACTGGTACTATGGCACA+AGG 0.707110 2_3:-38330545 Msa0290650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTTTTGAACTTTA+TGG - chr2_3:38331203-38331222 Msa0290650:intron 10.0%
!!! TTTATTATGGTTAATTTTTC+AGG - chr2_3:38331004-38331023 Msa0290650:CDS 15.0%
!! GGAAAAACAATAAAAAAAAA+AGG + chr2_3:38331059-38331078 None:intergenic 15.0%
!! TTTCTATTACATAGAAATTT+AGG - chr2_3:38331086-38331105 Msa0290650:CDS 15.0%
!! TTAAAATAAGAGATGTATAA+TGG + chr2_3:38331375-38331394 None:intergenic 15.0%
!! ATACTAATTATGTAACAAAT+TGG + chr2_3:38331818-38331837 None:intergenic 15.0%
!!! TACATAATTAGTATTTTCAA+TGG - chr2_3:38331824-38331843 Msa0290650:intron 15.0%
!! CATTACTAAGATATTTATGA+TGG - chr2_3:38330675-38330694 Msa0290650:CDS 20.0%
!! TTCTTTACAACACTTTAATA+TGG - chr2_3:38330839-38330858 Msa0290650:CDS 20.0%
!!! TGATCTGAATCTTTTTATTA+TGG - chr2_3:38330991-38331010 Msa0290650:CDS 20.0%
!! ATAATACATAATCATGTGTA+AGG + chr2_3:38331230-38331249 None:intergenic 20.0%
!! ATTGACAAGATCTTTATATA+TGG - chr2_3:38331256-38331275 Msa0290650:intron 20.0%
!!! TTTGTTTTGAATCTTTTTGT+TGG - chr2_3:38331458-38331477 Msa0290650:intron 20.0%
!!! TTGTTTTGAATCTTTTTGTT+GGG - chr2_3:38331459-38331478 Msa0290650:intron 20.0%
!! TTTATAAGTGCACATATATT+TGG - chr2_3:38331639-38331658 Msa0290650:intron 20.0%
!! TGAATTTAGTTGTATATTTC+AGG - chr2_3:38331860-38331879 Msa0290650:intron 20.0%
! TTTGAGAAGAGAAAGAAAAA+AGG + chr2_3:38330624-38330643 None:intergenic 25.0%
!!! TGGTTTCTTTAATTTTTCAG+AGG - chr2_3:38330695-38330714 Msa0290650:CDS 25.0%
!!! TAAAAATTATTTTGCTGCAC+CGG - chr2_3:38330952-38330971 Msa0290650:CDS 25.0%
! CTATGTAATAGAAACAACAA+AGG + chr2_3:38331080-38331099 None:intergenic 25.0%
! ATTACATAGAAATTTAGGCT+TGG - chr2_3:38331091-38331110 Msa0290650:CDS 25.0%
! ATTCAATGATCACTCAATTA+AGG - chr2_3:38331132-38331151 Msa0290650:CDS 25.0%
!!! TGTTTTGAATCTTTTTGTTG+GGG - chr2_3:38331460-38331479 Msa0290650:intron 25.0%
! AATTGTATATATAGTGCATC+CGG - chr2_3:38331781-38331800 Msa0290650:CDS 25.0%
! GAAATACATGCAAAGTATAT+TGG - chr2_3:38331920-38331939 Msa0290650:intron 25.0%
! TGCTACAACTAATAACTTAA+AGG - chr2_3:38331983-38332002 Msa0290650:intron 25.0%
! GCTACAACTAATAACTTAAA+GGG - chr2_3:38331984-38332003 Msa0290650:intron 25.0%
! TGAAAAGATGTAAAACTAAG+AGG + chr2_3:38332068-38332087 None:intergenic 25.0%
!! TTTTTCCATTTCCACTATAA+GGG + chr2_3:38332238-38332257 None:intergenic 25.0%
!!! TTTTTTCCATTTCCACTATA+AGG + chr2_3:38332239-38332258 None:intergenic 25.0%
!! ATTTAAGGCTTCAAGATTTA+GGG - chr2_3:38332279-38332298 Msa0290650:intron 25.0%
! ATAACTAATTCTCATCCAAA+TGG + chr2_3:38332569-38332588 None:intergenic 25.0%
! CGTTAGAATAATTAAAACGT+TGG + chr2_3:38332719-38332738 None:intergenic 25.0%
!!! TCTCACTTGTATGTTTTTTT+AGG - chr2_3:38332785-38332804 Msa0290650:five_prime_UTR 25.0%
AAGTATAAAGCAAAGTGAGA+AGG + chr2_3:38330288-38330307 None:intergenic 30.0%
! CTTTGCTTTATACTTTGAGA+AGG - chr2_3:38330293-38330312 Msa0290650:three_prime_UTR 30.0%
!! CGTTTTTGAAGAAGAGAAAA+TGG + chr2_3:38330339-38330358 None:intergenic 30.0%
ATGCAAAATAGGGAAGAATA+TGG + chr2_3:38330364-38330383 None:intergenic 30.0%
TCATGTGAATTCATAGTTGA+AGG + chr2_3:38330456-38330475 None:intergenic 30.0%
! ATAACCCTCATGATAGTTTT+AGG + chr2_3:38330726-38330745 None:intergenic 30.0%
TAAAACTATCATGAGGGTTA+TGG - chr2_3:38330725-38330744 Msa0290650:CDS 30.0%
AAAACTATCATGAGGGTTAT+GGG - chr2_3:38330726-38330745 Msa0290650:CDS 30.0%
TTTGTATTCAAACCTGAAGA+TGG + chr2_3:38330785-38330804 None:intergenic 30.0%
CTTGTACAAAAATTTGCAAC+CGG - chr2_3:38330906-38330925 Msa0290650:CDS 30.0%
AATGATCACTCAATTAAGGA+TGG - chr2_3:38331136-38331155 Msa0290650:CDS 30.0%
! AGAGATGTATAATGGAAGAA+GGG + chr2_3:38331367-38331386 None:intergenic 30.0%
! AAGAGATGTATAATGGAAGA+AGG + chr2_3:38331368-38331387 None:intergenic 30.0%
!! GTTTTGAATCTTTTTGTTGG+GGG - chr2_3:38331461-38331480 Msa0290650:intron 30.0%
TTGAATTAGTAACTCACACA+AGG - chr2_3:38331522-38331541 Msa0290650:CDS 30.0%
! TGCACATATATTTGGAATCA+TGG - chr2_3:38331647-38331666 Msa0290650:intron 30.0%
GTTTGACGAAATTATAACGA+TGG - chr2_3:38331673-38331692 Msa0290650:intron 30.0%
TGAAAAACTATGCACTTTGA+AGG + chr2_3:38331717-38331736 None:intergenic 30.0%
ATGGGACTATTGAAAGAATT+TGG - chr2_3:38332038-38332057 Msa0290650:intron 30.0%
! TTTCAAGATCTTGACCTTTT+CGG - chr2_3:38332083-38332102 Msa0290650:intron 30.0%
CATATATGCATGATGATCTA+GGG + chr2_3:38332162-38332181 None:intergenic 30.0%
ATGGAAAAAACCCATTAATG+TGG - chr2_3:38332249-38332268 Msa0290650:intron 30.0%
AATCATCACTCCACATTAAT+GGG + chr2_3:38332262-38332281 None:intergenic 30.0%
AAATCATCACTCCACATTAA+TGG + chr2_3:38332263-38332282 None:intergenic 30.0%
TAATGTGGAGTGATGATTTA+AGG - chr2_3:38332264-38332283 Msa0290650:intron 30.0%
! GATTTAAGGCTTCAAGATTT+AGG - chr2_3:38332278-38332297 Msa0290650:intron 30.0%
TGAATTTGATCACCTTTGAA+AGG + chr2_3:38332329-38332348 None:intergenic 30.0%
ATACAAAGCCTTTACTTCAA+GGG - chr2_3:38332405-38332424 Msa0290650:intron 30.0%
AAAATTTCCCCTTGAAGTAA+AGG + chr2_3:38332416-38332435 None:intergenic 30.0%
! TTACTTCAAGGGGAAATTTT+AGG - chr2_3:38332416-38332435 Msa0290650:intron 30.0%
ATAGTACCAGTACTAATCAT+AGG + chr2_3:38332527-38332546 None:intergenic 30.0%
!! TATGATTAGTACTGGTACTA+TGG - chr2_3:38332526-38332545 Msa0290650:CDS 30.0%
! TTTGTTGTGAAACTCTCTTA+GGG - chr2_3:38332639-38332658 Msa0290650:CDS 30.0%
GAAATCATCATGTTCTTATG+AGG - chr2_3:38332679-38332698 Msa0290650:five_prime_UTR 30.0%
GAAGAGAAAATGGAAGTGAA+TGG + chr2_3:38330329-38330348 None:intergenic 35.0%
ACAAATGCGGATGCAAAATA+GGG + chr2_3:38330374-38330393 None:intergenic 35.0%
AACAAATGCGGATGCAAAAT+AGG + chr2_3:38330375-38330394 None:intergenic 35.0%
CAGAGATTCAAGAACAAATG+CGG + chr2_3:38330387-38330406 None:intergenic 35.0%
CATTTGTTCTTGAATCTCTG+CGG - chr2_3:38330387-38330406 Msa0290650:three_prime_UTR 35.0%
TTCATAGTTGAAGGCTTCTT+TGG + chr2_3:38330447-38330466 None:intergenic 35.0%
GAGAAGAGAAAGAAAAAAGG+TGG + chr2_3:38330621-38330640 None:intergenic 35.0%
CACTCCTAAAACTATCATGA+GGG - chr2_3:38330719-38330738 Msa0290650:CDS 35.0%
AGACAACATACTACTGTATC+CGG + chr2_3:38330928-38330947 None:intergenic 35.0%
TGATCATTGAATTCCTTGTG+GGG + chr2_3:38331124-38331143 None:intergenic 35.0%
GTGATCATTGAATTCCTTGT+GGG + chr2_3:38331125-38331144 None:intergenic 35.0%
AGTGATCATTGAATTCCTTG+TGG + chr2_3:38331126-38331145 None:intergenic 35.0%
TCAATTAAGGATGGTATGAG+AGG - chr2_3:38331145-38331164 Msa0290650:CDS 35.0%
! GTGACACTTCTTTTCTTTCT+AGG - chr2_3:38331167-38331186 Msa0290650:CDS 35.0%
ATGCATACTCATTCATGTTG+CGG + chr2_3:38331337-38331356 None:intergenic 35.0%
! GTATAATGGAAGAAGGGAAT+TGG + chr2_3:38331361-38331380 None:intergenic 35.0%
TGTAATCAGGATGCAAATTG+AGG - chr2_3:38331549-38331568 Msa0290650:intron 35.0%
TTGAAGGTTGAACGAAATCA+CGG + chr2_3:38331701-38331720 None:intergenic 35.0%
!! ATCCTTTGAAACCAGTTGTA+CGG - chr2_3:38331751-38331770 Msa0290650:intron 35.0%
!! CAAATTGGATTCTCTAAAGC+CGG + chr2_3:38331803-38331822 None:intergenic 35.0%
AACTACGAATTGAAGCTCAA+GGG - chr2_3:38331898-38331917 Msa0290650:intron 35.0%
ACTTGACCTTCAACAAAACA+TGG - chr2_3:38332127-38332146 Msa0290650:intron 35.0%
GCATATATGCATGATGATCT+AGG + chr2_3:38332163-38332182 None:intergenic 35.0%
ATCAATGAGAACTTAAGCCT+TGG - chr2_3:38332185-38332204 Msa0290650:intron 35.0%
! CACTATAAGGGTTAGTGTTA+GGG + chr2_3:38332226-38332245 None:intergenic 35.0%
! ACTAACCCTTATAGTGGAAA+TGG - chr2_3:38332230-38332249 Msa0290650:intron 35.0%
GATACAAAGCCTTTACTTCA+AGG - chr2_3:38332404-38332423 Msa0290650:intron 35.0%
TACAAAGCCTTTACTTCAAG+GGG - chr2_3:38332406-38332425 Msa0290650:intron 35.0%
ATTCTTTCAGCATGAAGAGA+TGG + chr2_3:38332500-38332519 None:intergenic 35.0%
ATGAGTCCTATGATTAGTAC+TGG - chr2_3:38332518-38332537 Msa0290650:CDS 35.0%
CTAAGAGAGTTTCACAACAA+AGG + chr2_3:38332640-38332659 None:intergenic 35.0%
! CTTTGTTGTGAAACTCTCTT+AGG - chr2_3:38332638-38332657 Msa0290650:CDS 35.0%
!!! CTCTCTTAGGGTTTTGAATT+TGG - chr2_3:38332651-38332670 Msa0290650:CDS 35.0%
!!! TAGGGTTTTGAATTTGGTCT+TGG - chr2_3:38332657-38332676 Msa0290650:exon 35.0%
!! TGTTCTTATGAGGTATTGCA+TGG - chr2_3:38332689-38332708 Msa0290650:five_prime_UTR 35.0%
TAGTTGAAGGCTTCTTTGGA+GGG + chr2_3:38330443-38330462 None:intergenic 40.0%
ATAGTTGAAGGCTTCTTTGG+AGG + chr2_3:38330444-38330463 None:intergenic 40.0%
CAGCATCAACAAAACGTTCA+TGG + chr2_3:38330560-38330579 None:intergenic 40.0%
GGTGAAAGAATAGTACTGTC+AGG + chr2_3:38330600-38330619 None:intergenic 40.0%
!!! CCTCATGATAGTTTTAGGAG+TGG + chr2_3:38330721-38330740 None:intergenic 40.0%
CCACTCCTAAAACTATCATG+AGG - chr2_3:38330718-38330737 Msa0290650:CDS 40.0%
ATGAGGGTTATGGGTGTAAA+GGG - chr2_3:38330735-38330754 Msa0290650:CDS 40.0%
ATGGCTCTTGAGATGGTAAA+GGG + chr2_3:38330766-38330785 None:intergenic 40.0%
AATCATCTCCTACGATGCAA+AGG - chr2_3:38330869-38330888 Msa0290650:CDS 40.0%
!! CTTCAGCTTTAGAACTGCAA+CGG - chr2_3:38331282-38331301 Msa0290650:intron 40.0%
!! CACACAAGGTTGATGTAATC+AGG - chr2_3:38331536-38331555 Msa0290650:intron 40.0%
AAGACTACATGAGCAACTTG+AGG - chr2_3:38331579-38331598 Msa0290650:intron 40.0%
! CAACTGGTTTCAAAGGATCT+AGG + chr2_3:38331749-38331768 None:intergenic 40.0%
GAGCTTCAATTCGTAGTTGA+AGG + chr2_3:38331896-38331915 None:intergenic 40.0%
CAACTACGAATTGAAGCTCA+AGG - chr2_3:38331897-38331916 Msa0290650:intron 40.0%
AAAGCTTATCAGACACTTGC+AGG - chr2_3:38331945-38331964 Msa0290650:CDS 40.0%
!! AACTTAAAGGGCGTTGTTCT+TGG - chr2_3:38331996-38332015 Msa0290650:intron 40.0%
!! GCTTGTCCATGTTTTGTTGA+AGG + chr2_3:38332136-38332155 None:intergenic 40.0%
ACTTAAGCCTTGGCAAGAAA+AGG - chr2_3:38332195-38332214 Msa0290650:intron 40.0%
! TAAGGGTTAGTGTTAGGGTT+AGG + chr2_3:38332221-38332240 None:intergenic 40.0%
! CCACTATAAGGGTTAGTGTT+AGG + chr2_3:38332227-38332246 None:intergenic 40.0%
CCTAACACTAACCCTTATAG+TGG - chr2_3:38332224-38332243 Msa0290650:intron 40.0%
TGCTTGGATGATCCTTTCAA+AGG - chr2_3:38332314-38332333 Msa0290650:CDS 40.0%
TCAAATTGCACCACCATCAT+TGG - chr2_3:38332346-38332365 Msa0290650:CDS 40.0%
TCACTTCCTCTATCCAATGA+TGG + chr2_3:38332362-38332381 None:intergenic 40.0%
CGGTATTCTCTTCACAGAGA+TGG - chr2_3:38330407-38330426 Msa0290650:three_prime_UTR 45.0%
GATAGACCCATGTGTGTTCA+AGG - chr2_3:38330474-38330493 Msa0290650:three_prime_UTR 45.0%
GAGTCACCTTGAACACACAT+GGG + chr2_3:38330483-38330502 None:intergenic 45.0%
TGAGTCACCTTGAACACACA+TGG + chr2_3:38330484-38330503 None:intergenic 45.0%
ATGTGTGTTCAAGGTGACTC+AGG - chr2_3:38330483-38330502 Msa0290650:three_prime_UTR 45.0%
! TCCAACGAAGACGAGGTTTT+GGG + chr2_3:38330527-38330546 None:intergenic 45.0%
GTTGATGCTGTTACTCAGCT+TGG - chr2_3:38330570-38330589 Msa0290650:CDS 45.0%
CATGAGGGTTATGGGTGTAA+AGG - chr2_3:38330734-38330753 Msa0290650:CDS 45.0%
GATGGCTCTTGAGATGGTAA+AGG + chr2_3:38330767-38330786 None:intergenic 45.0%
ACGGAATACTGCTTCCTCTT+CGG - chr2_3:38331301-38331320 Msa0290650:intron 45.0%
! GAATCTTTTTGTTGGGGGTG+AGG - chr2_3:38331466-38331485 Msa0290650:intron 45.0%
! GGGGTGAGGAGATTTTTGTT+TGG - chr2_3:38331480-38331499 Msa0290650:intron 45.0%
! CACCGTACAACTGGTTTCAA+AGG + chr2_3:38331756-38331775 None:intergenic 45.0%
AATTGACTGCACCGTACAAC+TGG + chr2_3:38331765-38331784 None:intergenic 45.0%
GACACTTGCAGGTGAAAACA+TGG - chr2_3:38331956-38331975 Msa0290650:CDS 45.0%
TGTTCTTGGACCTCATGGAA+TGG - chr2_3:38332010-38332029 Msa0290650:intron 45.0%
ACCTCATGGAATGGCTGAAA+TGG - chr2_3:38332019-38332038 Msa0290650:intron 45.0%
CCTCATGGAATGGCTGAAAT+GGG - chr2_3:38332020-38332039 Msa0290650:intron 45.0%
! CAAGATCTTGACCTTTTCGG+AGG - chr2_3:38332086-38332105 Msa0290650:intron 45.0%
CTTCCTCTATCCAATGATGG+TGG + chr2_3:38332359-38332378 None:intergenic 45.0%
AAAGACCCTCACCAAGAAGA+GGG - chr2_3:38332474-38332493 Msa0290650:intron 45.0%
!! AGTACTGGTACTATGGCACA+AGG - chr2_3:38332533-38332552 Msa0290650:CDS 45.0%
!!! TTTTGTTATTTTTTTATATT+TGG - chr2_3:38330650-38330669 Msa0290650:CDS 5.0%
!! AAAAAATTAAAAAAAAAGAT+TGG + chr2_3:38331195-38331214 None:intergenic 5.0%
ACCCAAAACCTCGTCTTCGT+TGG - chr2_3:38330523-38330542 Msa0290650:CDS 50.0%
! GTCCAACGAAGACGAGGTTT+TGG + chr2_3:38330528-38330547 None:intergenic 50.0%
TCAACAGTCCAACGAAGACG+AGG + chr2_3:38330534-38330553 None:intergenic 50.0%
GATGCTGTTACTCAGCTTGG+AGG - chr2_3:38330573-38330592 Msa0290650:CDS 50.0%
CCTGAAGATGGCTCTTGAGA+TGG + chr2_3:38330773-38330792 None:intergenic 50.0%
CCATCTCAAGAGCCATCTTC+AGG - chr2_3:38330770-38330789 Msa0290650:CDS 50.0%
TTGCTGCACCTTTGCATCGT+AGG + chr2_3:38330880-38330899 None:intergenic 50.0%
GCTTCCTCTTCGGCTATGAT+TGG - chr2_3:38331311-38331330 Msa0290650:intron 50.0%
CCCATTTCAGCCATTCCATG+AGG + chr2_3:38332023-38332042 None:intergenic 50.0%
! GATCTTGACCTTTTCGGAGG+CGG - chr2_3:38332089-38332108 Msa0290650:intron 50.0%
! GGTTAGGCCTTTTCTTGCCA+AGG + chr2_3:38332205-38332224 None:intergenic 50.0%
AGGGACAGCTTCATCATGCT+TGG - chr2_3:38332298-38332317 Msa0290650:intron 50.0%
GCACCACCATCATTGGATAG+AGG - chr2_3:38332353-38332372 Msa0290650:CDS 50.0%
GAAAGACCCTCACCAAGAAG+AGG - chr2_3:38332473-38332492 Msa0290650:intron 50.0%
TGAAGAGATGGCCCTCTTCT+TGG + chr2_3:38332488-38332507 None:intergenic 50.0%
GGTACTATGGCACAAGGTAG+AGG - chr2_3:38332539-38332558 Msa0290650:CDS 50.0%
CAAGGTAGAGGCTCACCATT+TGG - chr2_3:38332551-38332570 Msa0290650:CDS 50.0%
GCTTGGAAAGCAACCCCACA+AGG - chr2_3:38331108-38331127 Msa0290650:CDS 55.0%
GGCGTTGTTCTTGGACCTCA+TGG - chr2_3:38332005-38332024 Msa0290650:intron 55.0%
GATGGCCCTCTTCTTGGTGA+GGG + chr2_3:38332482-38332501 None:intergenic 55.0%
AGATGGCCCTCTTCTTGGTG+AGG + chr2_3:38332483-38332502 None:intergenic 55.0%
TCATCTCTCACGCTGCGCAC+CGG + chr2_3:38330974-38330993 None:intergenic 60.0%
GCGGCCAATCATAGCCGAAG+AGG + chr2_3:38331318-38331337 None:intergenic 60.0%
! CTTGACCTTTTCGGAGGCGG+TGG - chr2_3:38332092-38332111 Msa0290650:intron 60.0%
! GACCTTTTCGGAGGCGGTGG+TGG - chr2_3:38332095-38332114 Msa0290650:intron 65.0%
CACCACCACCGCCTCCGAAA+AGG + chr2_3:38332100-38332119 None:intergenic 65.0%
!! CTTTTCGGAGGCGGTGGTGG+TGG - chr2_3:38332098-38332117 Msa0290650:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 38330270 38332830 38330270 ID=Msa0290650;Name=Msa0290650
chr2_3 mRNA 38330270 38332830 38330270 ID=Msa0290650-mRNA-1;Parent=Msa0290650;Name=Msa0290650-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|0.8|0.83|1|0.8|0.83|6|253|372
chr2_3 exon 38330270 38331218 38330270 ID=Msa0290650-mRNA-1:exon:12455;Parent=Msa0290650-mRNA-1
chr2_3 exon 38331500 38331542 38331500 ID=Msa0290650-mRNA-1:exon:12454;Parent=Msa0290650-mRNA-1
chr2_3 exon 38331752 38331818 38331752 ID=Msa0290650-mRNA-1:exon:12453;Parent=Msa0290650-mRNA-1
chr2_3 exon 38331943 38332000 38331943 ID=Msa0290650-mRNA-1:exon:12452;Parent=Msa0290650-mRNA-1
chr2_3 exon 38332309 38332385 38332309 ID=Msa0290650-mRNA-1:exon:12451;Parent=Msa0290650-mRNA-1
chr2_3 exon 38332497 38332830 38332497 ID=Msa0290650-mRNA-1:exon:12450;Parent=Msa0290650-mRNA-1
chr2_3 five_prime_UTR 38332675 38332830 38332675 ID=Msa0290650-mRNA-1:five_prime_utr;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38332497 38332674 38332497 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38332309 38332385 38332309 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38331943 38332000 38331943 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38331752 38331818 38331752 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38331500 38331542 38331500 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 CDS 38330523 38331218 38330523 ID=Msa0290650-mRNA-1:cds;Parent=Msa0290650-mRNA-1
chr2_3 three_prime_UTR 38330270 38330522 38330270 ID=Msa0290650-mRNA-1:three_prime_utr;Parent=Msa0290650-mRNA-1
Gene Sequence

>Msa0290650

ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGACCTGACAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTAAAGGGTCTTACCCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCGGCTATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAACTTGAGGTACAAAAACACCTTCAACTACGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAAAAAGCTTATCAGACACTTGCAGGTGAAAACATGGCATCTGCTACAACTAATAACTTAAAGGGCGTTGTTCTTGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTACATCTTTTCAAGATCTTGACCTTTTCGGAGGCGGTGGTGGTGGTGATCAACTTGACCTTCAACAAAACATGGACAAGCAAACCCTAGATCATCATGCATATATGCAAATCAATGAGAACTTAAGCCTTGGCAAGAAAAGGCCTAACCCTAACACTAACCCTTATAGTGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCACCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTAGGTGAAAAGAAATTTGATGCATCTATGAATAAACTTGAAAGACCCTCACCAAGAAGAGGGCCATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACTGGTACTATGGCACAAGGTAGAGGCTCACCATTTGGATGA
Protein sequence

>Msa0290650

MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASATTNNLKGVVLGPHGMAEMGLLKEFGSPLSFTSFQDLDLFGGGGGGDQLDLQQNMDKQTLDHHAYMQINENLSLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILGEKKFDASMNKLERPSPRRGPSLHAERMSPMISTGTMAQGRGSPFG*