AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1304090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304090 MtrunA17_Chr8g0365051 85.946 185 24 2 1 185 1 183 5.37e-82 243
Msa1304090 MtrunA17_Chr1g0147821 58.333 192 66 5 1 188 1 182 2.60e-35 124
Msa1304090 MtrunA17_Chr3g0139061 60.345 116 38 2 1 109 1 115 4.23e-30 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304090 AT4G31580.2 55.000 200 74 6 1 190 1 194 5.22e-38 132
Msa1304090 AT4G31580.1 55.000 200 74 6 1 190 1 194 5.22e-38 132
Msa1304090 AT1G23860.1 54.229 201 63 8 1 186 1 187 4.35e-36 127
Msa1304090 AT1G23860.2 54.229 201 63 8 1 186 1 187 4.35e-36 127
Msa1304090 AT2G24590.1 57.068 191 76 4 1 188 1 188 8.82e-34 121
Msa1304090 AT1G23860.3 50.538 186 70 5 1 186 1 164 1.37e-33 120
Msa1304090 AT1G23860.4 52.500 200 64 8 1 186 1 183 6.94e-33 118

Find 138 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGGTTTATATTGGGAATT+TGG 0.194118 8_3:+67367945 Msa1304090:CDS
TCTTGACAGTTTAGTGGTTT+TGG 0.208237 8_3:+67371890 Msa1304090:three_prime_UTR
CTGCGATCATAACCATAATT+TGG 0.247382 8_3:-67369270 Msa1304080:intron
ACTAGTTTCAGCTTCCTTAC+TGG 0.247754 8_3:+67371632 Msa1304090:three_prime_UTR
CTTCCACGACGCCGATAATA+AGG 0.252904 8_3:-67369246 Msa1304080:intron
TCATGAAATCGAATCAAAAT+TGG 0.260324 8_3:+67371056 Msa1304090:three_prime_UTR
ACGCCATCGTTTGAAATTCT+AGG 0.270961 8_3:+67367724 Msa1304090:five_prime_UTR
GGAGGAGGCCGTGGTGGTGG+TGG 0.273168 8_3:+67369096 Msa1304090:CDS
TGAACAATTCTTTCACTATC+AGG 0.274600 8_3:+67367793 Msa1304090:five_prime_UTR
AATTTCAAACGATGGCGTTT+TGG 0.275355 8_3:-67367719 Msa1304080:intron
TTGGATTTGTGGAATCAAAA+AGG 0.289960 8_3:+67371242 Msa1304090:three_prime_UTR
TATTTCTCTTGACAGTTTAG+TGG 0.327586 8_3:+67371884 Msa1304090:three_prime_UTR
GGTTGAAATTTGAGAGTTTA+CGG 0.331634 8_3:+67371777 Msa1304090:three_prime_UTR
AGAATGGCTAGGGTTTATAT+TGG 0.332092 8_3:+67367937 Msa1304090:exon
GGAGGAGGAGGCCGTGGTGG+TGG 0.346070 8_3:+67369093 Msa1304090:CDS
GCAATCAACATGCAAACATT+TGG 0.346411 8_3:-67371154 Msa1304080:intron
GTGGTTAAATTGATGATTGC+TGG 0.354538 8_3:+67371129 Msa1304090:three_prime_UTR
CTAGTTTCAGCTTCCTTACT+GGG 0.357015 8_3:+67371633 Msa1304090:three_prime_UTR
GGTGGGCGCGGCGGACGCGG+AGG 0.364130 8_3:+67369114 Msa1304090:CDS
GGCCGTGGTGGTGGTGGGCG+CGG 0.368369 8_3:+67369102 Msa1304090:CDS
TAGCTATCACCTTTAGCTAC+TGG 0.377068 8_3:+67371684 Msa1304090:three_prime_UTR
GTGGGCGCGGCGGACGCGGA+GGG 0.379777 8_3:+67369115 Msa1304090:CDS
TATTCTTCATGCTAAACTCT+TGG 0.380363 8_3:+67371509 Msa1304090:three_prime_UTR
TAGTCTCCATGGTACGCTAT+TGG 0.382791 8_3:+67371200 Msa1304090:three_prime_UTR
CCTTGATGCAATTCATGAAT+TGG 0.384043 8_3:+67368883 Msa1304090:CDS
GGTGGTGGGCGCGGCGGACG+CGG 0.386382 8_3:+67369111 Msa1304090:CDS
AGTCTCCATGGTACGCTATT+GGG 0.394858 8_3:+67371201 Msa1304090:three_prime_UTR
CGCCATCGTTTGAAATTCTA+GGG 0.399491 8_3:+67367725 Msa1304090:five_prime_UTR
CTTGGCAAATCTCAGTCAAC+TGG 0.402620 8_3:-67371393 Msa1304080:intron
GACTGCAATGACCGACATCT+TGG 0.403451 8_3:+67371223 Msa1304090:three_prime_UTR
AGTGGAGGAGGAGGAGGCCG+TGG 0.407053 8_3:+67369087 Msa1304090:CDS
GTGTGTATGGTGTTCTTCGC+AGG 0.411496 8_3:+67368007 Msa1304090:CDS
GAATGGCTAGGGTTTATATT+GGG 0.412848 8_3:+67367938 Msa1304090:exon
CGTCGTGGAAGTCCAAATTA+TGG 0.413494 8_3:+67369258 Msa1304090:CDS
ATTCTGTGTGGTTAAATAGA+TGG 0.415052 8_3:+67371430 Msa1304090:three_prime_UTR
ATTCTTCATGCTAAACTCTT+GGG 0.417792 8_3:+67371510 Msa1304090:three_prime_UTR
TTAAACTTGTCCAATTCAAA+AGG 0.430667 8_3:-67370997 Msa1304080:intron
TTCAACTTCACCAATTCAAA+AGG 0.439192 8_3:-67371321 Msa1304080:intron
GGTTCACGAGGCCTAGGAAA+TGG 0.440238 8_3:+67369204 Msa1304090:CDS
AAGGTTGTTCTGTTTAACTA+AGG 0.440848 8_3:+67371570 Msa1304090:three_prime_UTR
TGGGCGCGGCGGACGCGGAG+GGG 0.443303 8_3:+67369116 Msa1304090:CDS
GAGGAGGCCGTGGTGGTGGT+GGG 0.446675 8_3:+67369097 Msa1304090:CDS
CAATCGTACCCGTTGGCATA+AGG 0.448563 8_3:-67370316 Msa1304080:intron
GTGGTGAAACAATGCTGTTT+TGG 0.451640 8_3:-67370829 Msa1304080:intron
GAGAATAACGGTATGGAGGA+GGG 0.452563 8_3:-67370282 Msa1304080:intron
AGCTATCACCTTTAGCTACT+GGG 0.453918 8_3:+67371685 Msa1304090:three_prime_UTR
GAAGTCCTAGTCCTTATTAT+CGG 0.463894 8_3:+67369235 Msa1304090:CDS
AAACTCGATAAATGCATATC+CGG 0.464844 8_3:-67368843 Msa1304080:intron
CGAGAATAACGGTATGGAGG+AGG 0.468353 8_3:-67370283 Msa1304080:intron
TGCTATGAATGTGGTGAACC+TGG 0.469840 8_3:+67369150 Msa1304090:CDS
CGCGGTGGTTCACGAGGCCT+AGG 0.470108 8_3:+67369198 Msa1304090:CDS
GAATTGGACAAGTTTAAAGA+TGG 0.473825 8_3:+67371003 Msa1304090:CDS
AATTCTAAGAGTGGAGGAGG+AGG 0.476429 8_3:+67369078 Msa1304090:CDS
CACCACATTCATAGCATTTG+AGG 0.476814 8_3:-67369143 Msa1304080:intron
TTTGAATTGGTGAAGTTGAA+TGG 0.476929 8_3:+67371324 Msa1304090:three_prime_UTR
GTGAACCTGGACACTTTGCT+CGG 0.477269 8_3:+67369163 Msa1304090:CDS
TCTAAGAGTGGAGGAGGAGG+AGG 0.479968 8_3:+67369081 Msa1304090:CDS
AAGGAAGCTGAAACTAGTTA+AGG 0.482929 8_3:-67371627 Msa1304080:intron
GAAGATGAATTTCGTGTGTA+TGG 0.483339 8_3:+67367994 Msa1304090:CDS
TTCGTCTCCTTCCATTTCCT+AGG 0.486230 8_3:-67369215 Msa1304080:intron
CAAATTATGGTTATGATCGC+AGG 0.492260 8_3:+67369271 Msa1304090:CDS
GTGATTCACCTTATGCCAAC+GGG 0.499803 8_3:+67370308 Msa1304090:CDS
CACTCCCGAGCAAAGTGTCC+AGG 0.501069 8_3:-67369168 Msa1304080:intron
TGACCGACATCTTGGATTTG+TGG 0.501713 8_3:+67371231 Msa1304090:three_prime_UTR
GTGAATCACGGCGAGAATAA+CGG 0.506800 8_3:-67370294 Msa1304080:intron
ATCAATTTAACCACACAGAA+TGG 0.511222 8_3:-67371120 Msa1304080:intron
GACTGCAATGATCGGCATCT+TGG 0.518629 8_3:+67371532 Msa1304090:three_prime_UTR
CCAATTCATGAATTGCATCA+AGG 0.522137 8_3:-67368883 Msa1304080:intron
CAATTCATGAATTGCATCAA+GGG 0.523222 8_3:-67368882 Msa1304080:intron
ATCTATTTAACCACACAGAA+TGG 0.526889 8_3:-67371428 Msa1304080:intron
GGTGTTATGCTACGTCGTCT+TGG 0.528879 8_3:-67370232 Msa1304080:intron
CTCGTGAACCACCGCGTGAA+CGG 0.534891 8_3:-67369191 Msa1304080:intron
CATAATTCTAAGAGTGGAGG+AGG 0.536345 8_3:+67369075 Msa1304090:CDS
AAGAGAGGTTTGTGGAGGCA+TGG 0.550964 8_3:-67370879 Msa1304080:intron
CTGGGTTGCTCGCAGACCAC+CGG 0.550975 8_3:+67368824 Msa1304090:CDS
GACGCTTGTGAAGCCCAGTA+AGG 0.551736 8_3:-67371646 Msa1304080:intron
TTGGTTGTGTGGGATCAGTA+AGG 0.552779 8_3:+67371551 Msa1304090:three_prime_UTR
GAATGGTGAAGTTATTCACT+TGG 0.552858 8_3:-67371411 Msa1304080:intron
TCGTCTGTTATTACACTGGA+TGG 0.557498 8_3:+67371756 Msa1304090:three_prime_UTR
AGAATAACGGTATGGAGGAG+GGG 0.558348 8_3:-67370281 Msa1304080:intron
GGAGGAGGAGGAGGCCGTGG+TGG 0.559481 8_3:+67369090 Msa1304090:CDS
CGACGCCGATAATAAGGACT+AGG 0.559929 8_3:-67369240 Msa1304080:intron
CGCCGCGCCCACCACCACCA+CGG 0.561772 8_3:-67369104 Msa1304080:intron
ACATTGATCCCAGTAGCTAA+AGG 0.565253 8_3:-67371693 Msa1304080:intron
TGATCGGCATCTTGGTTGTG+TGG 0.565819 8_3:+67371540 Msa1304090:three_prime_UTR
ATCCCTAGAATTTCAAACGA+TGG 0.566573 8_3:-67367727 Msa1304080:intron
AACTTGTCCAATTCAAAAGG+AGG 0.571043 8_3:-67370994 Msa1304080:intron
ACTCTTGGGACTGCAATGAT+CGG 0.574033 8_3:+67371524 Msa1304090:three_prime_UTR
TGAACCTGGACACTTTGCTC+GGG 0.574413 8_3:+67369164 Msa1304090:CDS
AGTTCCCTCTCAGTGACTCG+AGG 0.575427 8_3:-67367970 Msa1304080:intron
AAGCAAACGAGAAGCGCAGA+TGG 0.579118 8_3:-67371729 Msa1304080:intron
AATATCGTCTGTTATTACAC+TGG 0.579927 8_3:+67371752 Msa1304090:three_prime_UTR
GAGCGGTGATGCAAGACGCT+AGG 0.582883 8_3:-67371601 Msa1304080:intron
TGAAGAATAAAGACAAAACA+AGG 0.583202 8_3:-67371495 Msa1304080:intron
GTTCCCTCTCAGTGACTCGA+GGG 0.584016 8_3:-67367969 Msa1304080:intron
CTGCTTCTTGCCATTCTGTG+TGG 0.585160 8_3:+67371110 Msa1304090:three_prime_UTR
CTTTCTCATAATTCTAAGAG+TGG 0.585332 8_3:+67369069 Msa1304090:CDS
TTATCGAGTTTGATGATCGG+AGG 0.585575 8_3:+67368855 Msa1304090:CDS
GATGCAATTCATGAATTGGA+TGG 0.586849 8_3:+67368887 Msa1304090:CDS
GAAGCAACAAGAGAGGTTTG+TGG 0.591782 8_3:-67370887 Msa1304080:intron
CGTGGTGGTGGTGGGCGCGG+CGG 0.594946 8_3:+67369105 Msa1304090:CDS
CATTTATCGAGTTTGATGAT+CGG 0.597144 8_3:+67368852 Msa1304090:CDS
AGCAGACAAGATGTACTAAG+TGG 0.598603 8_3:-67370848 Msa1304080:intron
AACTTCACCAATTCAAAAGG+AGG 0.599022 8_3:-67371318 Msa1304080:intron
TGGAGACTACAGACGTAACA+AGG 0.600204 8_3:-67371186 Msa1304080:intron
TCACGGCGAGAATAACGGTA+TGG 0.602797 8_3:-67370289 Msa1304080:intron
ATTCCACAAATCCAAGATGT+CGG 0.607455 8_3:-67371234 Msa1304080:intron
CGTGATTCACCTTATGCCAA+CGG 0.607663 8_3:+67370307 Msa1304090:CDS
CGTTCACGCGGTGGTTCACG+AGG 0.608918 8_3:+67369192 Msa1304090:CDS
TGTTACGTCTGTAGTCTCCA+TGG 0.613179 8_3:+67371189 Msa1304090:three_prime_UTR
TCTCATAATTCTAAGAGTGG+AGG 0.615126 8_3:+67369072 Msa1304090:CDS
GAATTGGTGAAGTTGAATGG+TGG 0.618769 8_3:+67371327 Msa1304090:three_prime_UTR
GATCGGCATCTTGGTTGTGT+GGG 0.618833 8_3:+67371541 Msa1304090:three_prime_UTR
GCTCGGGAGTGCCGTTCACG+CGG 0.623311 8_3:+67369180 Msa1304090:CDS
TGTGTGGTTAAATAGATGGT+TGG 0.624333 8_3:+67371434 Msa1304090:three_prime_UTR
CACGAGGCCTAGGAAATGGA+AGG 0.626617 8_3:+67369208 Msa1304090:CDS
AGTCCTTATTATCGGCGTCG+TGG 0.628842 8_3:+67369243 Msa1304090:CDS
TATCGAGTTTGATGATCGGA+GGG 0.636971 8_3:+67368856 Msa1304090:CDS
CGGCGAGAATAACGGTATGG+AGG 0.643032 8_3:-67370286 Msa1304080:intron
TTGGAGATCTTCTCCCACGC+GGG 0.646297 8_3:-67370213 Msa1304080:intron
CGTTGGCATAAGGTGAATCA+CGG 0.649133 8_3:-67370306 Msa1304080:intron
CTCGATAAATGCATATCCGG+TGG 0.650215 8_3:-67368840 Msa1304080:intron
TCAGGAGTTATAGCCCGCGT+GGG 0.651961 8_3:+67370200 Msa1304090:intron
GCAACAAGAGAGGTTTGTGG+AGG 0.658162 8_3:-67370884 Msa1304080:intron
ATATGCAGAAGCAACAAGAG+AGG 0.660961 8_3:-67370894 Msa1304080:intron
ATCAGGAGTTATAGCCCGCG+TGG 0.663488 8_3:+67370199 Msa1304090:intron
GGACCCTCGAGTCACTGAGA+GGG 0.664225 8_3:+67367966 Msa1304090:CDS
AAAAGCAGAGAAATTTAGCG+TGG 0.673882 8_3:-67371858 Msa1304080:intron
CTGCTGTAGCTACGACCACG+AGG 0.684406 8_3:-67370256 Msa1304080:intron
GCAGTCCCAATAGCGTACCA+TGG 0.684791 8_3:-67371206 Msa1304080:intron
GACCTCAAATGCTATGAATG+TGG 0.686030 8_3:+67369141 Msa1304090:CDS
CTTGGAGATCTTCTCCCACG+CGG 0.688043 8_3:-67370214 Msa1304080:intron
TGGACCCTCGAGTCACTGAG+AGG 0.689956 8_3:+67367965 Msa1304090:CDS
AATAACTTCACCATTCTGTG+TGG 0.695332 8_3:+67371418 Msa1304090:three_prime_UTR
CTGTAGCTACGACCACGAGG+AGG 0.709885 8_3:-67370253 Msa1304080:intron
GAAGAATAAAGACAAAACAA+GGG 0.711225 8_3:-67371494 Msa1304080:intron
CGTAGCATAACACCTCCTCG+TGG 0.757379 8_3:+67370241 Msa1304090:CDS
GAAACTAGTTAAGGTCAGAG+CGG 0.758665 8_3:-67371618 Msa1304080:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGGAATAATTAAAATTTA+TGG + chr8_3:67368093-67368112 Msa1304090:intron 10.0%
!!! TTTTTATCTATAACATATTT+TGG - chr8_3:67368559-67368578 Msa1304080:intron 10.0%
!!! ATTTTTTTTAAAAAAATGCG+AGG + chr8_3:67368424-67368443 Msa1304090:intron 15.0%
!! AATATATACAAATTATATGG+AGG + chr8_3:67368578-67368597 Msa1304090:intron 15.0%
!! TAAATATTAATGCAAATTAG+AGG + chr8_3:67368616-67368635 Msa1304090:intron 15.0%
!! TGAATATATCAATAAAAGAA+TGG - chr8_3:67370143-67370162 Msa1304080:intron 15.0%
!! ACCATAATATATATAAAGTA+GGG - chr8_3:67370699-67370718 Msa1304080:intron 15.0%
!! TTGATATATTGTCATTAATA+AGG + chr8_3:67370761-67370780 Msa1304090:intron 15.0%
!!! TTTTTTTTTTTTGCGATGAT+TGG + chr8_3:67367873-67367892 Msa1304090:intron 20.0%
!!! GTTTTCACAAAATTTTGTAT+AGG + chr8_3:67367907-67367926 Msa1304090:intron 20.0%
!!! ACAAAATTTTGTATAGGTTT+TGG + chr8_3:67367913-67367932 Msa1304090:intron 20.0%
!! ATTTATGGTACATTAAATTG+TGG + chr8_3:67368108-67368127 Msa1304090:intron 20.0%
!! AATTGAAGTAAATTCAAACA+AGG + chr8_3:67368294-67368313 Msa1304090:intron 20.0%
!! ATTCAAACAAGGTATAATAA+CGG + chr8_3:67368305-67368324 Msa1304090:intron 20.0%
!! GTGATTAACAATATTGATAT+AGG + chr8_3:67368681-67368700 Msa1304090:intron 20.0%
!! ATAATGTATGAATGTTGTAT+AGG + chr8_3:67369024-67369043 Msa1304090:intron 20.0%
!!! CTTTTTATTTTGTTACAGTT+TGG + chr8_3:67369373-67369392 Msa1304090:intron 20.0%
!!! AAAGGGAAGATTTAAAATAT+GGG - chr8_3:67370414-67370433 Msa1304080:intron 20.0%
!!! AAAAGGGAAGATTTAAAATA+TGG - chr8_3:67370415-67370434 Msa1304080:intron 20.0%
!! AAAATGATGAATAATTGTTG+TGG + chr8_3:67370472-67370491 Msa1304090:intron 20.0%
!! TCCCTACTTTATATATATTA+TGG + chr8_3:67370695-67370714 Msa1304090:intron 20.0%
!! CACCATAATATATATAAAGT+AGG - chr8_3:67370700-67370719 Msa1304080:intron 20.0%
! CGAAAAATTTGAGAAGAAAA+TGG - chr8_3:67367852-67367871 Msa1304080:intron 25.0%
!! GCTAGAAATATTTTCACTTA+AGG + chr8_3:67368075-67368094 Msa1304090:intron 25.0%
!!! TAAGATTTTTTCGTGGATAA+TGG + chr8_3:67368337-67368356 Msa1304090:intron 25.0%
! ACCATTAATTACGTTCTAAT+AGG + chr8_3:67368527-67368546 Msa1304090:intron 25.0%
! TCCTATTAGAACGTAATTAA+TGG - chr8_3:67368531-67368550 Msa1304080:intron 25.0%
! TGTATTTGTTCCATCATTAT+TGG + chr8_3:67368758-67368777 Msa1304090:intron 25.0%
!!! AAGTTTTGAACCAATAATGA+TGG - chr8_3:67368771-67368790 Msa1304080:intron 25.0%
! TTATGCATCATATTGAGATT+TGG + chr8_3:67368994-67369013 Msa1304090:intron 25.0%
! TATGCATCATATTGAGATTT+GGG + chr8_3:67368995-67369014 Msa1304090:intron 25.0%
! GAATGTTGTATAGGAAAAAA+TGG + chr8_3:67369033-67369052 Msa1304090:intron 25.0%
!! TATTTTGTTACAGTTTGGAT+TGG + chr8_3:67369378-67369397 Msa1304090:intron 25.0%
! ATATTTGCATTCCTAAACAA+TGG - chr8_3:67369407-67369426 Msa1304080:intron 25.0%
! ATTGAATTTCATTCGAATAG+AGG - chr8_3:67369587-67369606 Msa1304080:intron 25.0%
! ATTGTTCTGCAAATTATGTT+GGG + chr8_3:67369632-67369651 Msa1304090:intron 25.0%
!! GCTTTTATTCCTTGTTAATT+TGG + chr8_3:67369792-67369811 Msa1304090:intron 25.0%
! ACAAATCTACCAAATTAACA+AGG - chr8_3:67369804-67369823 Msa1304080:intron 25.0%
!! AATTGAAATTTTTCTCTGCT+TGG + chr8_3:67369888-67369907 Msa1304090:intron 25.0%
!! ATTGAAATTTTTCTCTGCTT+GGG + chr8_3:67369889-67369908 Msa1304090:intron 25.0%
! TAATGCACTTAGAAATTGTA+CGG - chr8_3:67370086-67370105 Msa1304080:intron 25.0%
!! ATCTTCTCATGTTTTTCATT+TGG + chr8_3:67370162-67370181 Msa1304090:intron 25.0%
!! TCTTCTCATGTTTTTCATTT+GGG + chr8_3:67370163-67370182 Msa1304090:intron 25.0%
!! ATGTGATTTGAGTTAATGAA+TGG + chr8_3:67370366-67370385 Msa1304090:intron 25.0%
!! AATCTCTGGAAAAAAGAAAA+GGG - chr8_3:67370431-67370450 Msa1304080:intron 25.0%
!! TAATCTCTGGAAAAAAGAAA+AGG - chr8_3:67370432-67370451 Msa1304080:intron 25.0%
! ATTATGTTATGTCATGACAA+TGG + chr8_3:67370555-67370574 Msa1304090:intron 25.0%
! TATATCAAAAATCACCATAG+TGG - chr8_3:67370749-67370768 Msa1304080:intron 25.0%
! TTAAACTTGTCCAATTCAAA+AGG - chr8_3:67371000-67371019 Msa1304080:intron 25.0%
!!! ATTTTGATTCGATTTCATGA+AGG - chr8_3:67371056-67371075 Msa1304080:intron 25.0%
! TCATGAAATCGAATCAAAAT+TGG + chr8_3:67371056-67371075 Msa1304090:three_prime_UTR 25.0%
! GAAGAATAAAGACAAAACAA+GGG - chr8_3:67371497-67371516 Msa1304080:intron 25.0%
! TGAAGAATAAAGACAAAACA+AGG - chr8_3:67371498-67371517 Msa1304080:intron 25.0%
TGAACAATTCTTTCACTATC+AGG + chr8_3:67367793-67367812 Msa1304090:five_prime_UTR 30.0%
!!! TTGTATAGGTTTTGGAAGAA+TGG + chr8_3:67367921-67367940 Msa1304090:intron 30.0%
TAGGGTTTATATTGGGAATT+TGG + chr8_3:67367945-67367964 Msa1304090:CDS 30.0%
AACAAGGTATAATAACGGTT+CGG + chr8_3:67368310-67368329 Msa1304090:intron 30.0%
AAAATATCTACTGTTGAAGC+AGG - chr8_3:67368378-67368397 Msa1304080:intron 30.0%
!!! GAATCTGCCATTTTCATTTT+GGG - chr8_3:67368460-67368479 Msa1304080:intron 30.0%
!!! TTTTTTGCAATACAGTGTCT+GGG + chr8_3:67368806-67368825 Msa1304090:intron 30.0%
AAACTCGATAAATGCATATC+CGG - chr8_3:67368846-67368865 Msa1304080:intron 30.0%
! CATTTATCGAGTTTGATGAT+CGG + chr8_3:67368852-67368871 Msa1304090:CDS 30.0%
CAATTCATGAATTGCATCAA+GGG - chr8_3:67368885-67368904 Msa1304080:intron 30.0%
AAATTGACAAAGCATGAACT+AGG - chr8_3:67368921-67368940 Msa1304080:intron 30.0%
ATGCATCATATTGAGATTTG+GGG + chr8_3:67368996-67369015 Msa1304090:intron 30.0%
! CTTTCTCATAATTCTAAGAG+TGG + chr8_3:67369069-67369088 Msa1304090:CDS 30.0%
TGATTATTACCAACTTAAGC+AGG - chr8_3:67369517-67369536 Msa1304080:intron 30.0%
!! GCTTAAGTTGGTAATAATCA+AGG + chr8_3:67369517-67369536 Msa1304090:intron 30.0%
GAAATTCAATATCTTTGCTG+AGG + chr8_3:67369597-67369616 Msa1304090:intron 30.0%
GATTGTTCTGCAAATTATGT+TGG + chr8_3:67369631-67369650 Msa1304090:intron 30.0%
TTGTTCTGCAAATTATGTTG+GGG + chr8_3:67369633-67369652 Msa1304090:intron 30.0%
!! TTTTTAGCGTTGTCAAATGT+TGG + chr8_3:67369677-67369696 Msa1304090:intron 30.0%
GATTTATGAATATCCTTTCC+AGG - chr8_3:67369966-67369985 Msa1304080:intron 30.0%
TTATGTCATGACAATGGAAT+GGG + chr8_3:67370561-67370580 Msa1304090:intron 30.0%
AATGGGTATTACTATGAACT+TGG + chr8_3:67370578-67370597 Msa1304090:intron 30.0%
ATATATAAAGTAGGGAAGAC+TGG - chr8_3:67370691-67370710 Msa1304080:intron 30.0%
! CAGAGAAACATCAACATTTT+AGG - chr8_3:67370789-67370808 Msa1304080:intron 30.0%
GAATTGGACAAGTTTAAAGA+TGG + chr8_3:67371003-67371022 Msa1304090:CDS 30.0%
ATCAATTTAACCACACAGAA+TGG - chr8_3:67371123-67371142 Msa1304080:intron 30.0%
TTGGATTTGTGGAATCAAAA+AGG + chr8_3:67371242-67371261 Msa1304090:three_prime_UTR 30.0%
TTCAACTTCACCAATTCAAA+AGG - chr8_3:67371324-67371343 Msa1304080:intron 30.0%
TTTGAATTGGTGAAGTTGAA+TGG + chr8_3:67371324-67371343 Msa1304090:three_prime_UTR 30.0%
ATCTATTTAACCACACAGAA+TGG - chr8_3:67371431-67371450 Msa1304080:intron 30.0%
ATTCTGTGTGGTTAAATAGA+TGG + chr8_3:67371430-67371449 Msa1304090:three_prime_UTR 30.0%
TATTCTTCATGCTAAACTCT+TGG + chr8_3:67371509-67371528 Msa1304090:three_prime_UTR 30.0%
ATTCTTCATGCTAAACTCTT+GGG + chr8_3:67371510-67371529 Msa1304090:three_prime_UTR 30.0%
AAGGTTGTTCTGTTTAACTA+AGG + chr8_3:67371570-67371589 Msa1304090:three_prime_UTR 30.0%
AATATCGTCTGTTATTACAC+TGG + chr8_3:67371752-67371771 Msa1304090:three_prime_UTR 30.0%
GGTTGAAATTTGAGAGTTTA+CGG + chr8_3:67371777-67371796 Msa1304090:three_prime_UTR 30.0%
TATTTCTCTTGACAGTTTAG+TGG + chr8_3:67371884-67371903 Msa1304090:three_prime_UTR 30.0%
! ATTTCAAACGATGGCGTTTT+GGG - chr8_3:67367721-67367740 Msa1304080:intron 35.0%
! AATTTCAAACGATGGCGTTT+TGG - chr8_3:67367722-67367741 Msa1304080:intron 35.0%
ATCCCTAGAATTTCAAACGA+TGG - chr8_3:67367730-67367749 Msa1304080:intron 35.0%
AGAATGGCTAGGGTTTATAT+TGG + chr8_3:67367937-67367956 Msa1304090:exon 35.0%
GAATGGCTAGGGTTTATATT+GGG + chr8_3:67367938-67367957 Msa1304090:exon 35.0%
GAAGATGAATTTCGTGTGTA+TGG + chr8_3:67367994-67368013 Msa1304090:CDS 35.0%
GGAACTGATACGATCTTTAT+AGG + chr8_3:67368237-67368256 Msa1304090:intron 35.0%
GTGAACTCCCAAAATGAAAA+TGG + chr8_3:67368450-67368469 Msa1304090:intron 35.0%
!!! CGAATCTGCCATTTTCATTT+TGG - chr8_3:67368461-67368480 Msa1304080:intron 35.0%
CCATAAAGCAACTAAAGCAA+TGG - chr8_3:67368649-67368668 Msa1304080:intron 35.0%
! CCATTGCTTTAGTTGCTTTA+TGG + chr8_3:67368646-67368665 Msa1304090:intron 35.0%
! GCTTTAGTTGCTTTATGGTA+AGG + chr8_3:67368651-67368670 Msa1304090:intron 35.0%
! TTAGTTGCTTTATGGTAAGG+CGG + chr8_3:67368654-67368673 Msa1304090:intron 35.0%
!!! GTTTTTTGCAATACAGTGTC+TGG + chr8_3:67368805-67368824 Msa1304090:intron 35.0%
CCAATTCATGAATTGCATCA+AGG - chr8_3:67368886-67368905 Msa1304080:intron 35.0%
CCTTGATGCAATTCATGAAT+TGG + chr8_3:67368883-67368902 Msa1304090:CDS 35.0%
GATGCAATTCATGAATTGGA+TGG + chr8_3:67368887-67368906 Msa1304090:CDS 35.0%
GTTGTATAGGAAAAAATGGC+TGG + chr8_3:67369037-67369056 Msa1304090:intron 35.0%
! TCTCATAATTCTAAGAGTGG+AGG + chr8_3:67369072-67369091 Msa1304090:CDS 35.0%
GAAGTCCTAGTCCTTATTAT+CGG + chr8_3:67369235-67369254 Msa1304090:CDS 35.0%
CTGCGATCATAACCATAATT+TGG - chr8_3:67369273-67369292 Msa1304080:intron 35.0%
CAAATTATGGTTATGATCGC+AGG + chr8_3:67369271-67369290 Msa1304090:CDS 35.0%
! TACTATTCACGCACTGATAT+GGG + chr8_3:67369452-67369471 Msa1304090:intron 35.0%
TACCAACTTAAGCAGGTTAT+GGG - chr8_3:67369510-67369529 Msa1304080:intron 35.0%
TTACCAACTTAAGCAGGTTA+TGG - chr8_3:67369511-67369530 Msa1304080:intron 35.0%
AAAAATACACTACCGCAATC+CGG - chr8_3:67369708-67369727 Msa1304080:intron 35.0%
!!! TGTATTTTTTGACAAACGCC+CGG + chr8_3:67369719-67369738 Msa1304090:intron 35.0%
AATTCAACTTAACCACTGAG+TGG + chr8_3:67369999-67370018 Msa1304090:intron 35.0%
CACAATCAGATCTTAATCTC+TGG - chr8_3:67370445-67370464 Msa1304080:intron 35.0%
AAACTAGACTATAGCAGAGA+GGG - chr8_3:67370500-67370519 Msa1304080:intron 35.0%
! TGCTATAGTCTAGTTTCTCT+AGG + chr8_3:67370504-67370523 Msa1304090:intron 35.0%
!! TAGTCTAGTTTCTCTAGGAT+TGG + chr8_3:67370509-67370528 Msa1304090:intron 35.0%
!! AGTCTAGTTTCTCTAGGATT+GGG + chr8_3:67370510-67370529 Msa1304090:intron 35.0%
GTTATGTCATGACAATGGAA+TGG + chr8_3:67370560-67370579 Msa1304090:intron 35.0%
!! TTAGTCTTGCTAATCCACTA+TGG + chr8_3:67370732-67370751 Msa1304090:intron 35.0%
!!! TGTTTCTCTGTTTTGAAGTG+TGG + chr8_3:67370799-67370818 Msa1304090:intron 35.0%
!!! GTTTCTCTGTTTTGAAGTGT+GGG + chr8_3:67370800-67370819 Msa1304090:intron 35.0%
CATCGAGAGTCAACAAAAAA+AGG - chr8_3:67370958-67370977 Msa1304080:intron 35.0%
! GTTTCATCCTCCTTTTGAAT+TGG + chr8_3:67370987-67371006 Msa1304090:CDS 35.0%
AACTTGTCCAATTCAAAAGG+AGG - chr8_3:67370997-67371016 Msa1304080:intron 35.0%
! GTGGTTAAATTGATGATTGC+TGG + chr8_3:67371129-67371148 Msa1304090:three_prime_UTR 35.0%
GCAATCAACATGCAAACATT+TGG - chr8_3:67371157-67371176 Msa1304080:intron 35.0%
ATTCCACAAATCCAAGATGT+CGG - chr8_3:67371237-67371256 Msa1304080:intron 35.0%
AACTTCACCAATTCAAAAGG+AGG - chr8_3:67371321-67371340 Msa1304080:intron 35.0%
GAATGGTGAAGTTATTCACT+TGG - chr8_3:67371414-67371433 Msa1304080:intron 35.0%
AATAACTTCACCATTCTGTG+TGG + chr8_3:67371418-67371437 Msa1304090:three_prime_UTR 35.0%
TGTGTGGTTAAATAGATGGT+TGG + chr8_3:67371434-67371453 Msa1304090:three_prime_UTR 35.0%
AAGGAAGCTGAAACTAGTTA+AGG - chr8_3:67371630-67371649 Msa1304080:intron 35.0%
AAAAGCAGAGAAATTTAGCG+TGG - chr8_3:67371861-67371880 Msa1304080:intron 35.0%
! TCTTGACAGTTTAGTGGTTT+TGG + chr8_3:67371890-67371909 Msa1304090:three_prime_UTR 35.0%
! ACGCCATCGTTTGAAATTCT+AGG + chr8_3:67367724-67367743 Msa1304090:five_prime_UTR 40.0%
! CGCCATCGTTTGAAATTCTA+GGG + chr8_3:67367725-67367744 Msa1304090:five_prime_UTR 40.0%
!!! TAGGTTTTGGAAGAATGGCT+AGG + chr8_3:67367926-67367945 Msa1304090:intron 40.0%
!!! AGGTTTTGGAAGAATGGCTA+GGG + chr8_3:67367927-67367946 Msa1304090:intron 40.0%
TCTGCACTCTCTTTCAACAA+AGG + chr8_3:67368039-67368058 Msa1304090:intron 40.0%
TATTGTCTGCATGAACAACG+AGG + chr8_3:67368215-67368234 Msa1304090:intron 40.0%
ATTGTCTGCATGAACAACGA+GGG + chr8_3:67368216-67368235 Msa1304090:intron 40.0%
! AAGGTATAATAACGGTTCGG+TGG + chr8_3:67368313-67368332 Msa1304090:intron 40.0%
!!! CGGTGGTTAAGATTTTTTCG+TGG + chr8_3:67368330-67368349 Msa1304090:intron 40.0%
! TTTCGTGGATAATGGTACCA+CGG + chr8_3:67368345-67368364 Msa1304090:intron 40.0%
GCAACTAAAGCAATGGCTTT+AGG - chr8_3:67368642-67368661 Msa1304080:intron 40.0%
! TTATCGAGTTTGATGATCGG+AGG + chr8_3:67368855-67368874 Msa1304090:CDS 40.0%
! TATCGAGTTTGATGATCGGA+GGG + chr8_3:67368856-67368875 Msa1304090:CDS 40.0%
CATTGCTGAGTGTATGTTGT+TGG + chr8_3:67368946-67368965 Msa1304090:intron 40.0%
! CATAATTCTAAGAGTGGAGG+AGG + chr8_3:67369075-67369094 Msa1304090:CDS 40.0%
GACCTCAAATGCTATGAATG+TGG + chr8_3:67369141-67369160 Msa1304090:CDS 40.0%
CACCACATTCATAGCATTTG+AGG - chr8_3:67369146-67369165 Msa1304080:intron 40.0%
! GTGCGTGAATAGTACAGTTT+TGG - chr8_3:67369446-67369465 Msa1304080:intron 40.0%
! GTACTATTCACGCACTGATA+TGG + chr8_3:67369451-67369470 Msa1304090:intron 40.0%
AACCCATAACCTGCTTAAGT+TGG + chr8_3:67369505-67369524 Msa1304090:intron 40.0%
!!! TGTTGGGGACATCACTTTTT+CGG + chr8_3:67369648-67369667 Msa1304090:intron 40.0%
!!! GTATTTTTTGACAAACGCCC+GGG + chr8_3:67369720-67369739 Msa1304090:intron 40.0%
!!! TATTTTTTGACAAACGCCCG+GGG + chr8_3:67369721-67369740 Msa1304090:intron 40.0%
CATCCTTAACAAATTTCCCC+GGG - chr8_3:67369740-67369759 Msa1304080:intron 40.0%
CCATCCTTAACAAATTTCCC+CGG - chr8_3:67369741-67369760 Msa1304080:intron 40.0%
!! GGGAAATTTGTTAAGGATGG+TGG + chr8_3:67369741-67369760 Msa1304090:intron 40.0%
!! TTAAGGATGGTGGCGTTTTA+TGG + chr8_3:67369751-67369770 Msa1304090:intron 40.0%
GAAATTGTACGGTGGAAATG+AGG - chr8_3:67370075-67370094 Msa1304080:intron 40.0%
TGCACTTAGAAATTGTACGG+TGG - chr8_3:67370083-67370102 Msa1304080:intron 40.0%
! TGGGTTCGCTTCATTTTATC+AGG + chr8_3:67370182-67370201 Msa1304090:intron 40.0%
ACATAATCAATCGTACCCGT+TGG - chr8_3:67370326-67370345 Msa1304080:intron 40.0%
GAAACTAGACTATAGCAGAG+AGG - chr8_3:67370501-67370520 Msa1304080:intron 40.0%
! TAAGTGTTGTAGCCGCAAAA+GGG + chr8_3:67370606-67370625 Msa1304090:intron 40.0%
CTTCAGCTTACAAAACCTGA+AGG + chr8_3:67370660-67370679 Msa1304090:intron 40.0%
!!! CTGTTTTGAAGTGTGGGTAT+CGG + chr8_3:67370806-67370825 Msa1304090:intron 40.0%
!! GTGGTGAAACAATGCTGTTT+TGG - chr8_3:67370832-67370851 Msa1304080:intron 40.0%
AGCAGACAAGATGTACTAAG+TGG - chr8_3:67370851-67370870 Msa1304080:intron 40.0%
ATATGCAGAAGCAACAAGAG+AGG - chr8_3:67370897-67370916 Msa1304080:intron 40.0%
! TGCTCATCCTCCTTTTGAAT+TGG + chr8_3:67371311-67371330 Msa1304090:three_prime_UTR 40.0%
GAATTGGTGAAGTTGAATGG+TGG + chr8_3:67371327-67371346 Msa1304090:three_prime_UTR 40.0%
GAAACTAGTTAAGGTCAGAG+CGG - chr8_3:67371621-67371640 Msa1304080:intron 40.0%
! ACTAGTTTCAGCTTCCTTAC+TGG + chr8_3:67371632-67371651 Msa1304090:three_prime_UTR 40.0%
CTAGTTTCAGCTTCCTTACT+GGG + chr8_3:67371633-67371652 Msa1304090:three_prime_UTR 40.0%
TAGCTATCACCTTTAGCTAC+TGG + chr8_3:67371684-67371703 Msa1304090:three_prime_UTR 40.0%
AGCTATCACCTTTAGCTACT+GGG + chr8_3:67371685-67371704 Msa1304090:three_prime_UTR 40.0%
ACATTGATCCCAGTAGCTAA+AGG - chr8_3:67371696-67371715 Msa1304080:intron 40.0%
TCGTCTGTTATTACACTGGA+TGG + chr8_3:67371756-67371775 Msa1304090:three_prime_UTR 40.0%
! TTCGTGGATAATGGTACCAC+GGG + chr8_3:67368346-67368365 Msa1304090:intron 45.0%
TTTCTTCAGCCGAATGGTCA+CGG - chr8_3:67368487-67368506 Msa1304080:intron 45.0%
GTACTCTTTCTTCAGCCGAA+TGG - chr8_3:67368493-67368512 Msa1304080:intron 45.0%
CGTAATTAATGGTGCAGCAG+CGG - chr8_3:67368520-67368539 Msa1304080:intron 45.0%
CTCGATAAATGCATATCCGG+TGG - chr8_3:67368843-67368862 Msa1304080:intron 45.0%
! AATTCTAAGAGTGGAGGAGG+AGG + chr8_3:67369078-67369097 Msa1304090:CDS 45.0%
TGCTATGAATGTGGTGAACC+TGG + chr8_3:67369150-67369169 Msa1304090:CDS 45.0%
TTCGTCTCCTTCCATTTCCT+AGG - chr8_3:67369218-67369237 Msa1304080:intron 45.0%
CGTCGTGGAAGTCCAAATTA+TGG + chr8_3:67369258-67369277 Msa1304090:CDS 45.0%
! TGGATTGGACGCCATTGTTT+AGG + chr8_3:67369393-67369412 Msa1304090:intron 45.0%
TTGTCAAATGTTGGCCATGC+CGG + chr8_3:67369686-67369705 Msa1304090:intron 45.0%
!! CCGGGGAAATTTGTTAAGGA+TGG + chr8_3:67369738-67369757 Msa1304090:intron 45.0%
ATATCCTTTCCAGGCTGAGT+GGG - chr8_3:67369957-67369976 Msa1304080:intron 45.0%
AATATCCTTTCCAGGCTGAG+TGG - chr8_3:67369958-67369977 Msa1304080:intron 45.0%
AGAATAACGGTATGGAGGAG+GGG - chr8_3:67370284-67370303 Msa1304080:intron 45.0%
GAGAATAACGGTATGGAGGA+GGG - chr8_3:67370285-67370304 Msa1304080:intron 45.0%
GTGAATCACGGCGAGAATAA+CGG - chr8_3:67370297-67370316 Msa1304080:intron 45.0%
CGTTGGCATAAGGTGAATCA+CGG - chr8_3:67370309-67370328 Msa1304080:intron 45.0%
CGTGATTCACCTTATGCCAA+CGG + chr8_3:67370307-67370326 Msa1304090:CDS 45.0%
GTGATTCACCTTATGCCAAC+GGG + chr8_3:67370308-67370327 Msa1304090:CDS 45.0%
! CTAAGTGTTGTAGCCGCAAA+AGG + chr8_3:67370605-67370624 Msa1304090:intron 45.0%
GAAGCAACAAGAGAGGTTTG+TGG - chr8_3:67370890-67370909 Msa1304080:intron 45.0%
TGGAGACTACAGACGTAACA+AGG - chr8_3:67371189-67371208 Msa1304080:intron 45.0%
TGTTACGTCTGTAGTCTCCA+TGG + chr8_3:67371189-67371208 Msa1304090:three_prime_UTR 45.0%
TAGTCTCCATGGTACGCTAT+TGG + chr8_3:67371200-67371219 Msa1304090:three_prime_UTR 45.0%
AGTCTCCATGGTACGCTATT+GGG + chr8_3:67371201-67371220 Msa1304090:three_prime_UTR 45.0%
TGACCGACATCTTGGATTTG+TGG + chr8_3:67371231-67371250 Msa1304090:three_prime_UTR 45.0%
CTTGGCAAATCTCAGTCAAC+TGG - chr8_3:67371396-67371415 Msa1304080:intron 45.0%
ACTCTTGGGACTGCAATGAT+CGG + chr8_3:67371524-67371543 Msa1304090:three_prime_UTR 45.0%
TTGGTTGTGTGGGATCAGTA+AGG + chr8_3:67371551-67371570 Msa1304090:three_prime_UTR 45.0%
!! AAAAATATATACAAATTATA+TGG + chr8_3:67368575-67368594 Msa1304090:intron 5.0%
!! ACGATGGCGTTTTGGGCTTA+TGG - chr8_3:67367714-67367733 Msa1304080:intron 50.0%
GTGTGTATGGTGTTCTTCGC+AGG + chr8_3:67368007-67368026 Msa1304090:CDS 50.0%
TTGAAGCAGGATCAAACCCG+TGG - chr8_3:67368365-67368384 Msa1304080:intron 50.0%
GATTCGATCCCGTGACCATT+CGG + chr8_3:67368475-67368494 Msa1304090:intron 50.0%
TTCTTCAGCCGAATGGTCAC+GGG - chr8_3:67368486-67368505 Msa1304080:intron 50.0%
GTGAACCTGGACACTTTGCT+CGG + chr8_3:67369163-67369182 Msa1304090:CDS 50.0%
TGAACCTGGACACTTTGCTC+GGG + chr8_3:67369164-67369183 Msa1304090:CDS 50.0%
CGACGCCGATAATAAGGACT+AGG - chr8_3:67369243-67369262 Msa1304080:intron 50.0%
AGTCCTTATTATCGGCGTCG+TGG + chr8_3:67369243-67369262 Msa1304090:CDS 50.0%
CTTCCACGACGCCGATAATA+AGG - chr8_3:67369249-67369268 Msa1304080:intron 50.0%
! TCACGCACTGATATGGGAAC+AGG + chr8_3:67369458-67369477 Msa1304090:intron 50.0%
!! ACGCCCGGGGAAATTTGTTA+AGG + chr8_3:67369734-67369753 Msa1304090:intron 50.0%
!! AGGATGGTGGCGTTTTATGG+CGG + chr8_3:67369754-67369773 Msa1304090:intron 50.0%
!!! GTGGCGTTTTATGGCGGATA+TGG + chr8_3:67369760-67369779 Msa1304090:intron 50.0%
CAACTTAACCACTGAGTGGC+TGG + chr8_3:67370003-67370022 Msa1304090:intron 50.0%
! GATCTTTTCCAGCCACTCAG+TGG - chr8_3:67370014-67370033 Msa1304080:intron 50.0%
! GGTGTTATGCTACGTCGTCT+TGG - chr8_3:67370235-67370254 Msa1304080:intron 50.0%
CGAGAATAACGGTATGGAGG+AGG - chr8_3:67370286-67370305 Msa1304080:intron 50.0%
TCACGGCGAGAATAACGGTA+TGG - chr8_3:67370292-67370311 Msa1304080:intron 50.0%
CAATCGTACCCGTTGGCATA+AGG - chr8_3:67370319-67370338 Msa1304080:intron 50.0%
! CCTTGGACACTGTTTTGCGT+CGG + chr8_3:67370631-67370650 Msa1304090:intron 50.0%
AAGAGAGGTTTGTGGAGGCA+TGG - chr8_3:67370882-67370901 Msa1304080:intron 50.0%
GCAACAAGAGAGGTTTGTGG+AGG - chr8_3:67370887-67370906 Msa1304080:intron 50.0%
CTGCTTCTTGCCATTCTGTG+TGG + chr8_3:67371110-67371129 Msa1304090:three_prime_UTR 50.0%
GACTGCAATGACCGACATCT+TGG + chr8_3:67371223-67371242 Msa1304090:three_prime_UTR 50.0%
GACTGCAATGATCGGCATCT+TGG + chr8_3:67371532-67371551 Msa1304090:three_prime_UTR 50.0%
TGATCGGCATCTTGGTTGTG+TGG + chr8_3:67371540-67371559 Msa1304090:three_prime_UTR 50.0%
GATCGGCATCTTGGTTGTGT+GGG + chr8_3:67371541-67371560 Msa1304090:three_prime_UTR 50.0%
! AAGCAAACGAGAAGCGCAGA+TGG - chr8_3:67371732-67371751 Msa1304080:intron 50.0%
GTTCCCTCTCAGTGACTCGA+GGG - chr8_3:67367972-67367991 Msa1304080:intron 55.0%
AGTTCCCTCTCAGTGACTCG+AGG - chr8_3:67367973-67367992 Msa1304080:intron 55.0%
TCTAAGAGTGGAGGAGGAGG+AGG + chr8_3:67369081-67369100 Msa1304090:CDS 55.0%
GGTTCACGAGGCCTAGGAAA+TGG + chr8_3:67369204-67369223 Msa1304090:CDS 55.0%
CACGAGGCCTAGGAAATGGA+AGG + chr8_3:67369208-67369227 Msa1304090:CDS 55.0%
ATGTTGGCCATGCCGGATTG+CGG + chr8_3:67369693-67369712 Msa1304090:intron 55.0%
TACACTACCGCAATCCGGCA+TGG - chr8_3:67369703-67369722 Msa1304080:intron 55.0%
ATCAGGAGTTATAGCCCGCG+TGG + chr8_3:67370199-67370218 Msa1304090:intron 55.0%
TCAGGAGTTATAGCCCGCGT+GGG + chr8_3:67370200-67370219 Msa1304090:intron 55.0%
TTGGAGATCTTCTCCCACGC+GGG - chr8_3:67370216-67370235 Msa1304080:intron 55.0%
CTTGGAGATCTTCTCCCACG+CGG - chr8_3:67370217-67370236 Msa1304080:intron 55.0%
CGTAGCATAACACCTCCTCG+TGG + chr8_3:67370241-67370260 Msa1304090:CDS 55.0%
CGGCGAGAATAACGGTATGG+AGG - chr8_3:67370289-67370308 Msa1304080:intron 55.0%
!! GTGTCCAAGGCACCCTTTTG+CGG - chr8_3:67370621-67370640 Msa1304080:intron 55.0%
CCGACGCAAAACAGTGTCCA+AGG - chr8_3:67370634-67370653 Msa1304080:intron 55.0%
GCAGTCCCAATAGCGTACCA+TGG - chr8_3:67371209-67371228 Msa1304080:intron 55.0%
GACGCTTGTGAAGCCCAGTA+AGG - chr8_3:67371649-67371668 Msa1304080:intron 55.0%
TGGACCCTCGAGTCACTGAG+AGG + chr8_3:67367965-67367984 Msa1304090:CDS 60.0%
GGACCCTCGAGTCACTGAGA+GGG + chr8_3:67367966-67367985 Msa1304090:CDS 60.0%
! CACTCCCGAGCAAAGTGTCC+AGG - chr8_3:67369171-67369190 Msa1304080:intron 60.0%
CTCGTGAACCACCGCGTGAA+CGG - chr8_3:67369194-67369213 Msa1304080:intron 60.0%
TTCTGTCCTCCCACTCAGCC+TGG + chr8_3:67369945-67369964 Msa1304090:intron 60.0%
TCCTCCCACTCAGCCTGGAA+AGG + chr8_3:67369950-67369969 Msa1304090:intron 60.0%
TCCTTTCCAGGCTGAGTGGG+AGG - chr8_3:67369954-67369973 Msa1304080:intron 60.0%
CTGTAGCTACGACCACGAGG+AGG - chr8_3:67370256-67370275 Msa1304080:intron 60.0%
CTGCTGTAGCTACGACCACG+AGG - chr8_3:67370259-67370278 Msa1304080:intron 60.0%
!! GTAGCCGCAAAAGGGTGCCT+TGG + chr8_3:67370614-67370633 Msa1304090:intron 60.0%
GGAAGACTGGAGCGACCTTC+AGG - chr8_3:67370678-67370697 Msa1304080:intron 60.0%
GAGCGGTGATGCAAGACGCT+AGG - chr8_3:67371604-67371623 Msa1304080:intron 60.0%
CTGGGTTGCTCGCAGACCAC+CGG + chr8_3:67368824-67368843 Msa1304090:CDS 65.0%
CGTTCACGCGGTGGTTCACG+AGG + chr8_3:67369192-67369211 Msa1304090:CDS 65.0%
AGTGGAGGAGGAGGAGGCCG+TGG + chr8_3:67369087-67369106 Msa1304090:CDS 70.0%
!! GAGGAGGCCGTGGTGGTGGT+GGG + chr8_3:67369097-67369116 Msa1304090:CDS 70.0%
!! GCTCGGGAGTGCCGTTCACG+CGG + chr8_3:67369180-67369199 Msa1304090:CDS 70.0%
CGCGGTGGTTCACGAGGCCT+AGG + chr8_3:67369198-67369217 Msa1304090:CDS 70.0%
GGAGGAGGAGGAGGCCGTGG+TGG + chr8_3:67369090-67369109 Msa1304090:CDS 75.0%
GGAGGAGGAGGCCGTGGTGG+TGG + chr8_3:67369093-67369112 Msa1304090:CDS 75.0%
!! GGAGGAGGCCGTGGTGGTGG+TGG + chr8_3:67369096-67369115 Msa1304090:CDS 75.0%
!! CGGGAGTGCCGTTCACGCGG+TGG + chr8_3:67369183-67369202 Msa1304090:CDS 75.0%
!!! GGCCGTGGTGGTGGTGGGCG+CGG + chr8_3:67369102-67369121 Msa1304090:CDS 80.0%
! CGCCGCGCCCACCACCACCA+CGG - chr8_3:67369107-67369126 Msa1304080:intron 80.0%
!!! CGTGGTGGTGGTGGGCGCGG+CGG + chr8_3:67369105-67369124 Msa1304090:CDS 80.0%
!!! GGTGGTGGGCGCGGCGGACG+CGG + chr8_3:67369111-67369130 Msa1304090:CDS 85.0%
! GTGGGCGCGGCGGACGCGGA+GGG + chr8_3:67369115-67369134 Msa1304090:CDS 85.0%
! TGGGCGCGGCGGACGCGGAG+GGG + chr8_3:67369116-67369135 Msa1304090:CDS 85.0%
! GGTGGGCGCGGCGGACGCGG+AGG + chr8_3:67369114-67369133 Msa1304090:CDS 90.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67367708 67371922 67367708 ID=Msa1304090;Name=Msa1304090
chr8_3 mRNA 67367708 67371922 67367708 ID=Msa1304090-mRNA-1;Parent=Msa1304090;Name=Msa1304090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=118|0.6|0.83|1|0.8|0.66|6|889|256
chr8_3 exon 67367708 67367814 67367708 ID=Msa1304090-mRNA-1:exon:20594;Parent=Msa1304090-mRNA-1
chr8_3 exon 67367929 67368028 67367929 ID=Msa1304090-mRNA-1:exon:20595;Parent=Msa1304090-mRNA-1
chr8_3 exon 67368821 67368912 67368821 ID=Msa1304090-mRNA-1:exon:20596;Parent=Msa1304090-mRNA-1
chr8_3 exon 67369046 67369292 67369046 ID=Msa1304090-mRNA-1:exon:20597;Parent=Msa1304090-mRNA-1
chr8_3 exon 67370204 67370329 67370204 ID=Msa1304090-mRNA-1:exon:20598;Parent=Msa1304090-mRNA-1
chr8_3 exon 67370817 67371922 67370817 ID=Msa1304090-mRNA-1:exon:20599;Parent=Msa1304090-mRNA-1
chr8_3 five_prime_UTR 67367708 67367814 67367708 ID=Msa1304090-mRNA-1:five_prime_utr;Parent=Msa1304090-mRNA-1
chr8_3 five_prime_UTR 67367929 67367939 67367929 ID=Msa1304090-mRNA-1:five_prime_utr;Parent=Msa1304090-mRNA-1
chr8_3 CDS 67367940 67368028 67367940 ID=Msa1304090-mRNA-1:cds;Parent=Msa1304090-mRNA-1
chr8_3 CDS 67368821 67368912 67368821 ID=Msa1304090-mRNA-1:cds;Parent=Msa1304090-mRNA-1
chr8_3 CDS 67369046 67369292 67369046 ID=Msa1304090-mRNA-1:cds;Parent=Msa1304090-mRNA-1
chr8_3 CDS 67370204 67370329 67370204 ID=Msa1304090-mRNA-1:cds;Parent=Msa1304090-mRNA-1
chr8_3 CDS 67370817 67371033 67370817 ID=Msa1304090-mRNA-1:cds;Parent=Msa1304090-mRNA-1
chr8_3 three_prime_UTR 67371034 67371922 67371034 ID=Msa1304090-mRNA-1:three_prime_utr;Parent=Msa1304090-mRNA-1
Gene Sequence

>Msa1304090

ATGGCTAGGGTTTATATTGGGAATTTGGACCCTCGAGTCACTGAGAGGGAACTTGAAGATGAATTTCGTGTGTATGGTGTTCTTCGCAGTGTCTGGGTTGCTCGCAGACCACCGGATATGCATTTATCGAGTTTGATGATCGGAGGGACGCCCTTGATGCAATTCATGAATTGGATGGTAAGAAAAAATGGCTGGCGTGTAGAGCTTTCTCATAATTCTAAGAGTGGAGGAGGAGGAGGCCGTGGTGGTGGTGGGCGCGGCGGACGCGGAGGGGATGACCTCAAATGCTATGAATGTGGTGAACCTGGACACTTTGCTCGGGAGTGCCGTTCACGCGGTGGTTCACGAGGCCTAGGAAATGGAAGGAGACGAAGTCCTAGTCCTTATTATCGGCGTCGTGGAAGTCCAAATTATGGTTATGATCGCAGGAGTTATAGCCCGCGTGGGAGAAGATCTCCAAGACGACGTAGCATAACACCTCCTCGTGGTCGTAGCTACAGCAGATCCCCTCCTCCATACCGTTATTCTCGCCGTGATTCACCTTATGCCAACGGTGTGGGTATCGGCCAAAACAGCATTGTTTCACCACTTAGTACATCTTGTCTGCTTTTGTGCTCCATGCCTCCACAAACCTCTCTTGTTGCTTCTGCATATAAGTTGACTAAAACTGCAACATCAGAAGTTGCTTATGACCTTTTTTTGTTGACTCTCGATGAATGCTACAGTTTCATCCTCCTTTTGAATTGGACAAGTTTAAAGATGGATAGATAA
Protein sequence

>Msa1304090

MARVYIGNLDPRVTERELEDEFRVYGVLRSVWVARRPPDMHLSSLMIGGTPLMQFMNWMVRKNGWRVELSHNSKSGGGGGRGGGGRGGRGGDDLKCYECGEPGHFARECRSRGGSRGLGNGRRRSPSPYYRRRGSPNYGYDRRSYSPRGRRSPRRRSITPPRGRSYSRSPPPYRYSRRDSPYANGVGIGQNSIVSPLSTSCLLLCSMPPQTSLVASAYKLTKTATSEVAYDLFLLTLDECYSFILLLNWTSLKMDR*