Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369040 | AES74121.2 | 98.750 | 160 | 1 | 1 | 1 | 160 | 5 | 163 | 9.06e-113 | 334 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369040 | sp|Q9S851|NAC31_ARATH | 75.155 | 161 | 34 | 4 | 1 | 160 | 5 | 160 | 6.59e-81 | 245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369040 | G7J6G2 | 98.750 | 160 | 1 | 1 | 1 | 160 | 5 | 163 | 4.33e-113 | 334 |
Gene ID | Type | Classification |
---|---|---|
Msa1369040 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006980 | Msa1369040 | 0.810706 | 1.008994e-50 | -8.615850e-47 |
Msa1369040 | Msa1378870 | 0.825800 | 3.846353e-54 | -8.615850e-47 |
Msa0725860 | Msa1369040 | 0.810893 | 9.190928e-51 | -8.615850e-47 |
Msa0751890 | Msa1369040 | 0.832979 | 6.938708e-56 | -8.615850e-47 |
Msa0819890 | Msa1369040 | 0.800373 | 1.485613e-48 | -8.615850e-47 |
Msa0819900 | Msa1369040 | 0.808327 | 3.270755e-50 | -8.615850e-47 |
Msa0831940 | Msa1369040 | 0.813905 | 2.019975e-51 | -8.615850e-47 |
Msa0124130 | Msa1369040 | 0.819477 | 1.138006e-52 | -8.615850e-47 |
Msa0149140 | Msa1369040 | 0.824805 | 6.613790e-54 | -8.615850e-47 |
Msa1084520 | Msa1369040 | 0.818084 | 2.357500e-52 | -8.615850e-47 |
Msa0333700 | Msa1369040 | 0.833270 | 5.873443e-56 | -8.615850e-47 |
Msa1171310 | Msa1369040 | 0.809785 | 1.593828e-50 | -8.615850e-47 |
Msa0860160 | Msa1369040 | 0.818588 | 1.812423e-52 | -8.615850e-47 |
Msa0916640 | Msa1369040 | 0.835952 | 1.243213e-56 | -8.615850e-47 |
Msa0953540 | Msa1369040 | 0.807678 | 4.494527e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369040 | MtrunA17_Chr3g0144271 | 98.750 | 160 | 1 | 1 | 1 | 160 | 5 | 163 | 7.95e-115 | 331 |
Msa1369040 | MtrunA17_Chr2g0316971 | 75.912 | 137 | 29 | 2 | 19 | 152 | 23 | 158 | 4.90e-72 | 221 |
Msa1369040 | MtrunA17_Chr1g0147421 | 69.343 | 137 | 42 | 0 | 13 | 149 | 21 | 157 | 1.64e-70 | 216 |
Msa1369040 | MtrunA17_Chr6g0453451 | 69.565 | 138 | 39 | 2 | 10 | 147 | 11 | 145 | 4.67e-66 | 204 |
Msa1369040 | MtrunA17_Chr3g0139331 | 67.164 | 134 | 43 | 1 | 16 | 149 | 8 | 140 | 1.19e-65 | 203 |
Msa1369040 | MtrunA17_Chr6g0461661 | 69.697 | 132 | 39 | 1 | 19 | 150 | 18 | 148 | 1.80e-65 | 204 |
Msa1369040 | MtrunA17_Chr6g0484441 | 68.841 | 138 | 39 | 3 | 16 | 152 | 2 | 136 | 2.14e-64 | 199 |
Msa1369040 | MtrunA17_Chr4g0060931 | 66.207 | 145 | 45 | 3 | 3 | 147 | 2 | 142 | 1.17e-63 | 199 |
Msa1369040 | MtrunA17_Chr7g0217721 | 65.306 | 147 | 47 | 3 | 8 | 153 | 7 | 150 | 1.48e-63 | 198 |
Msa1369040 | MtrunA17_Chr3g0091921 | 66.667 | 144 | 40 | 3 | 4 | 147 | 6 | 141 | 2.45e-63 | 196 |
Msa1369040 | MtrunA17_Chr7g0253011 | 68.702 | 131 | 38 | 2 | 19 | 147 | 17 | 146 | 5.55e-63 | 197 |
Msa1369040 | MtrunA17_Chr7g0217711 | 61.538 | 156 | 51 | 4 | 8 | 157 | 7 | 159 | 1.27e-61 | 187 |
Msa1369040 | MtrunA17_Chr2g0312321 | 56.552 | 145 | 58 | 2 | 16 | 160 | 8 | 147 | 7.52e-56 | 177 |
Msa1369040 | MtrunA17_Chr1g0183741 | 56.618 | 136 | 58 | 1 | 19 | 154 | 10 | 144 | 5.24e-55 | 174 |
Msa1369040 | MtrunA17_Chr7g0261411 | 56.618 | 136 | 58 | 1 | 19 | 154 | 10 | 144 | 3.53e-54 | 172 |
Msa1369040 | MtrunA17_Chr6g0481091 | 61.194 | 134 | 47 | 4 | 18 | 149 | 5 | 135 | 3.16e-52 | 166 |
Msa1369040 | MtrunA17_Chr4g0018391 | 57.463 | 134 | 51 | 3 | 19 | 149 | 7 | 137 | 3.38e-52 | 169 |
Msa1369040 | MtrunA17_Chr2g0309891 | 58.333 | 144 | 55 | 3 | 19 | 160 | 6 | 146 | 3.64e-52 | 169 |
Msa1369040 | MtrunA17_Chr5g0405211 | 57.042 | 142 | 55 | 3 | 16 | 154 | 5 | 143 | 3.91e-52 | 169 |
Msa1369040 | MtrunA17_Chr8g0372121 | 57.042 | 142 | 55 | 3 | 16 | 154 | 3 | 141 | 8.17e-52 | 167 |
Msa1369040 | MtrunA17_Chr7g0263931 | 54.422 | 147 | 66 | 1 | 10 | 156 | 2 | 147 | 9.43e-52 | 167 |
Msa1369040 | MtrunA17_Chr4g0056541 | 57.353 | 136 | 52 | 3 | 19 | 151 | 7 | 139 | 1.85e-51 | 167 |
Msa1369040 | MtrunA17_Chr4g0017921 | 60.902 | 133 | 46 | 3 | 18 | 147 | 7 | 136 | 1.91e-51 | 167 |
Msa1369040 | MtrunA17_Chr2g0309331 | 59.259 | 135 | 50 | 3 | 16 | 147 | 7 | 139 | 2.92e-51 | 166 |
Msa1369040 | MtrunA17_Chr2g0318101 | 55.634 | 142 | 61 | 2 | 7 | 147 | 2 | 142 | 2.60e-50 | 164 |
Msa1369040 | MtrunA17_Chr5g0398971 | 56.296 | 135 | 54 | 3 | 19 | 150 | 7 | 139 | 2.65e-50 | 164 |
Msa1369040 | MtrunA17_Chr4g0047841 | 55.639 | 133 | 58 | 1 | 19 | 151 | 15 | 146 | 5.68e-50 | 163 |
Msa1369040 | MtrunA17_Chr5g0417791 | 57.364 | 129 | 52 | 2 | 19 | 147 | 3 | 128 | 5.85e-50 | 160 |
Msa1369040 | MtrunA17_Chr8g0346001 | 57.037 | 135 | 52 | 3 | 19 | 150 | 15 | 146 | 1.59e-49 | 164 |
Msa1369040 | MtrunA17_Chr7g0252971 | 53.237 | 139 | 57 | 2 | 16 | 147 | 5 | 142 | 5.38e-49 | 160 |
Msa1369040 | MtrunA17_Chr1g0200561 | 54.225 | 142 | 59 | 3 | 16 | 154 | 16 | 154 | 1.26e-48 | 160 |
Msa1369040 | MtrunA17_Chr4g0042561 | 57.364 | 129 | 52 | 2 | 19 | 147 | 9 | 134 | 2.58e-48 | 157 |
Msa1369040 | MtrunA17_Chr3g0124761 | 56.391 | 133 | 54 | 2 | 15 | 147 | 3 | 131 | 2.86e-48 | 157 |
Msa1369040 | MtrunA17_Chr2g0326361 | 56.589 | 129 | 55 | 1 | 19 | 147 | 14 | 141 | 3.37e-48 | 158 |
Msa1369040 | MtrunA17_Chr7g0214071 | 53.147 | 143 | 63 | 3 | 12 | 154 | 8 | 146 | 1.25e-47 | 155 |
Msa1369040 | MtrunA17_Chr5g0433781 | 59.542 | 131 | 48 | 3 | 19 | 147 | 6 | 133 | 4.46e-47 | 161 |
Msa1369040 | MtrunA17_Chr3g0109821 | 59.542 | 131 | 48 | 4 | 19 | 147 | 6 | 133 | 5.22e-47 | 161 |
Msa1369040 | MtrunA17_Chr8g0384721 | 57.364 | 129 | 51 | 2 | 19 | 147 | 7 | 131 | 5.57e-47 | 154 |
Msa1369040 | MtrunA17_Chr2g0318081 | 51.389 | 144 | 67 | 2 | 4 | 147 | 1 | 141 | 1.70e-46 | 154 |
Msa1369040 | MtrunA17_Chr3g0130731 | 55.970 | 134 | 55 | 2 | 14 | 147 | 2 | 131 | 1.71e-46 | 153 |
Msa1369040 | MtrunA17_Chr5g0417001 | 52.448 | 143 | 66 | 2 | 7 | 149 | 3 | 143 | 2.36e-45 | 152 |
Msa1369040 | MtrunA17_Chr8g0359921 | 56.589 | 129 | 53 | 2 | 19 | 147 | 14 | 139 | 2.77e-45 | 150 |
Msa1369040 | MtrunA17_Chr5g0400461 | 55.474 | 137 | 53 | 3 | 19 | 148 | 6 | 141 | 9.70e-45 | 149 |
Msa1369040 | MtrunA17_Chr8g0361731 | 50.365 | 137 | 67 | 1 | 13 | 149 | 8 | 143 | 9.96e-45 | 151 |
Msa1369040 | MtrunA17_Chr4g0076731 | 55.385 | 130 | 56 | 2 | 21 | 150 | 56 | 183 | 1.86e-44 | 151 |
Msa1369040 | MtrunA17_Chr4g0054791 | 55.303 | 132 | 55 | 3 | 19 | 147 | 6 | 136 | 5.89e-44 | 147 |
Msa1369040 | MtrunA17_Chr6g0453131 | 52.713 | 129 | 59 | 2 | 19 | 147 | 15 | 141 | 1.84e-43 | 147 |
Msa1369040 | MtrunA17_Chr1g0201021 | 57.692 | 130 | 48 | 5 | 21 | 147 | 21 | 146 | 2.16e-42 | 148 |
Msa1369040 | MtrunA17_Chr3g0128151 | 55.385 | 130 | 53 | 3 | 19 | 146 | 22 | 148 | 4.75e-42 | 147 |
Msa1369040 | MtrunA17_Chr5g0428991 | 55.385 | 130 | 53 | 3 | 19 | 146 | 25 | 151 | 4.93e-42 | 147 |
Msa1369040 | MtrunA17_Chr4g0038751 | 45.283 | 159 | 82 | 4 | 5 | 160 | 1 | 157 | 5.66e-42 | 141 |
Msa1369040 | MtrunA17_Chr5g0442771 | 48.175 | 137 | 69 | 2 | 12 | 147 | 11 | 146 | 4.74e-41 | 139 |
Msa1369040 | MtrunA17_Chr1g0197361 | 49.612 | 129 | 61 | 2 | 21 | 147 | 10 | 136 | 1.40e-40 | 143 |
Msa1369040 | MtrunA17_Chr3g0128111 | 51.969 | 127 | 56 | 3 | 22 | 146 | 45 | 168 | 2.12e-39 | 133 |
Msa1369040 | MtrunA17_Chr3g0092671 | 51.908 | 131 | 55 | 4 | 21 | 147 | 7 | 133 | 2.33e-39 | 139 |
Msa1369040 | MtrunA17_Chr3g0113001 | 70.930 | 86 | 23 | 1 | 68 | 153 | 13 | 96 | 7.24e-39 | 133 |
Msa1369040 | MtrunA17_Chr8g0364791 | 47.445 | 137 | 67 | 3 | 19 | 153 | 6 | 139 | 1.27e-38 | 136 |
Msa1369040 | MtrunA17_Chr2g0311661 | 48.872 | 133 | 64 | 3 | 21 | 150 | 23 | 154 | 1.84e-38 | 132 |
Msa1369040 | MtrunA17_Chr2g0311651 | 48.872 | 133 | 64 | 3 | 21 | 150 | 24 | 155 | 3.81e-38 | 132 |
Msa1369040 | MtrunA17_Chr8g0384201 | 45.390 | 141 | 72 | 3 | 19 | 157 | 6 | 143 | 3.99e-38 | 135 |
Msa1369040 | MtrunA17_Chr3g0130101 | 46.667 | 135 | 67 | 3 | 21 | 153 | 9 | 140 | 4.22e-38 | 133 |
Msa1369040 | MtrunA17_Chr1g0197351 | 53.077 | 130 | 54 | 4 | 19 | 145 | 42 | 167 | 1.54e-37 | 134 |
Msa1369040 | MtrunA17_Chr8g0385991 | 45.736 | 129 | 67 | 2 | 19 | 147 | 14 | 139 | 1.88e-36 | 125 |
Msa1369040 | MtrunA17_Chr4g0026141 | 47.407 | 135 | 66 | 2 | 16 | 146 | 2 | 135 | 2.06e-36 | 126 |
Msa1369040 | MtrunA17_Chr8g0345671 | 46.667 | 135 | 69 | 2 | 19 | 151 | 11 | 144 | 9.55e-36 | 127 |
Msa1369040 | MtrunA17_Chr2g0321631 | 48.507 | 134 | 59 | 4 | 20 | 146 | 5 | 135 | 1.33e-34 | 121 |
Msa1369040 | MtrunA17_Chr8g0345691 | 46.512 | 129 | 66 | 2 | 19 | 145 | 12 | 139 | 3.72e-34 | 124 |
Msa1369040 | MtrunA17_Chr3g0131911 | 46.617 | 133 | 66 | 3 | 19 | 149 | 14 | 143 | 1.05e-32 | 116 |
Msa1369040 | MtrunA17_Chr8g0345711 | 44.186 | 129 | 69 | 2 | 19 | 145 | 12 | 139 | 2.80e-31 | 110 |
Msa1369040 | MtrunA17_Chr3g0113031 | 68.493 | 73 | 21 | 1 | 81 | 153 | 1 | 71 | 2.43e-30 | 110 |
Msa1369040 | MtrunA17_Chr8g0345701 | 40.278 | 144 | 67 | 4 | 18 | 145 | 6 | 146 | 2.32e-29 | 105 |
Msa1369040 | MtrunA17_Chr2g0321741 | 52.632 | 95 | 42 | 2 | 52 | 145 | 24 | 116 | 4.42e-29 | 109 |
Msa1369040 | MtrunA17_Chr7g0266701 | 42.537 | 134 | 71 | 4 | 18 | 146 | 3 | 135 | 1.90e-28 | 105 |
Msa1369040 | MtrunA17_Chr8g0345731 | 42.748 | 131 | 71 | 3 | 19 | 145 | 24 | 154 | 3.22e-28 | 102 |
Msa1369040 | MtrunA17_Chr7g0243371 | 51.220 | 82 | 40 | 0 | 73 | 154 | 17 | 98 | 3.52e-27 | 98.6 |
Msa1369040 | MtrunA17_Chr4g0050701 | 41.085 | 129 | 67 | 2 | 19 | 147 | 11 | 130 | 2.54e-26 | 98.6 |
Msa1369040 | MtrunA17_Chr8g0345721 | 31.111 | 180 | 87 | 3 | 2 | 145 | 13 | 191 | 2.60e-26 | 99.0 |
Msa1369040 | MtrunA17_Chr8g0345741 | 36.364 | 132 | 78 | 4 | 30 | 159 | 2 | 129 | 1.03e-22 | 88.2 |
Msa1369040 | MtrunA17_Chr7g0251661 | 34.328 | 134 | 81 | 5 | 16 | 147 | 7 | 135 | 5.46e-19 | 78.6 |
Msa1369040 | MtrunA17_Chr8g0384351 | 41.221 | 131 | 58 | 5 | 19 | 149 | 10 | 121 | 6.67e-19 | 79.0 |
Msa1369040 | MtrunA17_Chr7g0251651 | 32.824 | 131 | 81 | 5 | 19 | 147 | 18 | 143 | 6.35e-17 | 73.9 |
Msa1369040 | MtrunA17_Chr3g0130321 | 32.857 | 140 | 87 | 2 | 19 | 158 | 7 | 139 | 1.16e-16 | 73.6 |
Msa1369040 | MtrunA17_Chr7g0251671 | 31.159 | 138 | 84 | 5 | 16 | 149 | 7 | 137 | 4.10e-16 | 71.2 |
Msa1369040 | MtrunA17_Chr3g0113011 | 55.000 | 60 | 25 | 2 | 8 | 66 | 7 | 65 | 1.19e-15 | 67.8 |
Msa1369040 | MtrunA17_Chr3g0113041 | 50.000 | 60 | 28 | 2 | 8 | 66 | 7 | 65 | 1.16e-12 | 60.1 |
Msa1369040 | MtrunA17_Chr4g0040541 | 32.886 | 149 | 79 | 6 | 18 | 149 | 47 | 191 | 1.82e-11 | 60.5 |
Msa1369040 | MtrunA17_Chr4g0046431 | 32.099 | 162 | 89 | 7 | 6 | 150 | 54 | 211 | 6.63e-11 | 59.3 |
Msa1369040 | MtrunA17_Chr2g0282871 | 31.507 | 146 | 80 | 6 | 18 | 147 | 52 | 193 | 7.05e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1369040 | AT1G76420.1 | 75.155 | 161 | 34 | 4 | 1 | 160 | 5 | 160 | 6.70e-82 | 245 |
Msa1369040 | AT2G24430.2 | 68.966 | 145 | 42 | 2 | 7 | 149 | 2 | 145 | 4.22e-71 | 217 |
Msa1369040 | AT2G24430.1 | 68.966 | 145 | 42 | 2 | 7 | 149 | 2 | 145 | 4.22e-71 | 217 |
Msa1369040 | AT5G53950.1 | 71.631 | 141 | 36 | 2 | 15 | 152 | 13 | 152 | 1.10e-68 | 213 |
Msa1369040 | AT3G15170.1 | 68.966 | 145 | 41 | 2 | 14 | 155 | 15 | 158 | 2.03e-68 | 210 |
Msa1369040 | AT5G61430.1 | 68.966 | 145 | 40 | 3 | 3 | 147 | 2 | 141 | 1.02e-66 | 206 |
Msa1369040 | AT5G39610.1 | 72.932 | 133 | 33 | 2 | 19 | 151 | 20 | 149 | 2.14e-66 | 204 |
Msa1369040 | AT3G29035.1 | 68.493 | 146 | 40 | 3 | 2 | 147 | 10 | 149 | 2.98e-66 | 204 |
Msa1369040 | AT3G18400.1 | 69.014 | 142 | 40 | 3 | 16 | 156 | 2 | 140 | 3.42e-66 | 204 |
Msa1369040 | AT5G07680.1 | 69.565 | 138 | 38 | 3 | 11 | 147 | 8 | 142 | 5.21e-64 | 199 |
Msa1369040 | AT5G07680.2 | 72.093 | 129 | 33 | 2 | 19 | 147 | 3 | 128 | 3.82e-63 | 196 |
Msa1369040 | AT5G18270.1 | 68.421 | 133 | 40 | 2 | 19 | 151 | 21 | 151 | 1.16e-62 | 196 |
Msa1369040 | AT5G18270.2 | 68.421 | 133 | 40 | 2 | 19 | 151 | 21 | 151 | 1.28e-62 | 196 |
Msa1369040 | AT3G04060.1 | 66.187 | 139 | 42 | 3 | 19 | 154 | 20 | 156 | 7.78e-61 | 191 |
Msa1369040 | AT1G56010.2 | 57.042 | 142 | 59 | 1 | 16 | 157 | 16 | 155 | 1.39e-57 | 182 |
Msa1369040 | AT3G12977.1 | 54.930 | 142 | 59 | 3 | 16 | 155 | 15 | 153 | 4.35e-54 | 172 |
Msa1369040 | AT5G62380.2 | 56.338 | 142 | 54 | 4 | 19 | 156 | 7 | 144 | 5.62e-53 | 171 |
Msa1369040 | AT5G62380.1 | 56.338 | 142 | 54 | 4 | 19 | 156 | 7 | 144 | 5.62e-53 | 171 |
Msa1369040 | AT2G46770.1 | 56.250 | 144 | 57 | 3 | 19 | 159 | 16 | 156 | 6.64e-53 | 172 |
Msa1369040 | AT4G28530.1 | 52.318 | 151 | 57 | 1 | 19 | 154 | 10 | 160 | 8.76e-53 | 171 |
Msa1369040 | AT4G36160.1 | 58.993 | 139 | 51 | 3 | 19 | 154 | 10 | 145 | 4.05e-52 | 170 |
Msa1369040 | AT4G36160.3 | 58.993 | 139 | 51 | 3 | 19 | 154 | 10 | 145 | 4.05e-52 | 170 |
Msa1369040 | AT4G36160.2 | 58.993 | 139 | 51 | 3 | 19 | 154 | 14 | 149 | 4.13e-52 | 170 |
Msa1369040 | AT2G18060.3 | 56.835 | 139 | 54 | 3 | 19 | 154 | 9 | 144 | 1.35e-51 | 168 |
Msa1369040 | AT2G18060.1 | 56.835 | 139 | 54 | 3 | 19 | 154 | 9 | 144 | 1.35e-51 | 168 |
Msa1369040 | AT1G69490.1 | 55.797 | 138 | 58 | 2 | 12 | 149 | 2 | 136 | 4.34e-51 | 164 |
Msa1369040 | AT1G12260.2 | 58.519 | 135 | 48 | 4 | 19 | 149 | 7 | 137 | 7.01e-51 | 166 |
Msa1369040 | AT4G10350.1 | 60.902 | 133 | 46 | 3 | 18 | 147 | 8 | 137 | 1.08e-50 | 165 |
Msa1369040 | AT3G17730.1 | 60.448 | 134 | 48 | 4 | 18 | 149 | 5 | 135 | 1.30e-50 | 162 |
Msa1369040 | AT1G12260.1 | 58.519 | 135 | 48 | 4 | 19 | 149 | 7 | 137 | 1.50e-50 | 166 |
Msa1369040 | AT5G66300.1 | 56.738 | 141 | 54 | 4 | 18 | 154 | 11 | 148 | 1.89e-50 | 163 |
Msa1369040 | AT3G61910.1 | 54.074 | 135 | 56 | 3 | 16 | 147 | 8 | 139 | 2.10e-50 | 164 |
Msa1369040 | AT1G71930.2 | 53.521 | 142 | 60 | 3 | 16 | 154 | 6 | 144 | 3.22e-50 | 164 |
Msa1369040 | AT1G71930.1 | 53.521 | 142 | 60 | 3 | 16 | 154 | 6 | 144 | 3.22e-50 | 164 |
Msa1369040 | AT1G61110.1 | 56.296 | 135 | 57 | 2 | 19 | 153 | 16 | 148 | 6.54e-50 | 163 |
Msa1369040 | AT1G62700.1 | 58.333 | 132 | 49 | 3 | 19 | 147 | 7 | 135 | 8.10e-50 | 164 |
Msa1369040 | AT1G62700.2 | 58.333 | 132 | 49 | 3 | 19 | 147 | 7 | 135 | 8.10e-50 | 164 |
Msa1369040 | AT1G33280.1 | 56.429 | 140 | 55 | 3 | 18 | 154 | 7 | 143 | 1.26e-49 | 162 |
Msa1369040 | AT5G08790.1 | 58.955 | 134 | 51 | 2 | 14 | 147 | 2 | 131 | 1.93e-49 | 160 |
Msa1369040 | AT1G79580.3 | 59.091 | 132 | 49 | 3 | 19 | 147 | 17 | 146 | 4.50e-49 | 162 |
Msa1369040 | AT1G79580.5 | 59.091 | 132 | 49 | 3 | 19 | 147 | 17 | 146 | 4.50e-49 | 162 |
Msa1369040 | AT1G79580.4 | 59.091 | 132 | 49 | 3 | 19 | 147 | 17 | 146 | 4.50e-49 | 162 |
Msa1369040 | AT1G79580.2 | 59.091 | 132 | 49 | 3 | 19 | 147 | 17 | 146 | 4.50e-49 | 162 |
Msa1369040 | AT1G79580.1 | 59.091 | 132 | 49 | 3 | 19 | 147 | 17 | 146 | 4.50e-49 | 162 |
Msa1369040 | AT1G32770.1 | 57.576 | 132 | 50 | 3 | 19 | 147 | 16 | 144 | 5.83e-49 | 161 |
Msa1369040 | AT5G63790.1 | 58.955 | 134 | 51 | 2 | 14 | 147 | 45 | 174 | 6.18e-49 | 160 |
Msa1369040 | AT5G63790.2 | 58.955 | 134 | 51 | 2 | 14 | 147 | 55 | 184 | 6.47e-49 | 160 |
Msa1369040 | AT5G39820.1 | 50.658 | 152 | 68 | 3 | 7 | 153 | 8 | 157 | 2.98e-48 | 159 |
Msa1369040 | AT3G03200.1 | 59.286 | 140 | 52 | 4 | 18 | 155 | 5 | 141 | 5.51e-48 | 161 |
Msa1369040 | AT3G04070.2 | 53.623 | 138 | 60 | 2 | 13 | 147 | 4 | 140 | 7.44e-48 | 158 |
Msa1369040 | AT1G01720.1 | 57.364 | 129 | 51 | 2 | 19 | 147 | 7 | 131 | 7.76e-48 | 156 |
Msa1369040 | AT4G27410.2 | 54.225 | 142 | 60 | 3 | 19 | 160 | 14 | 150 | 8.38e-48 | 157 |
Msa1369040 | AT3G04070.1 | 53.623 | 138 | 60 | 2 | 13 | 147 | 4 | 140 | 1.35e-47 | 158 |
Msa1369040 | AT5G17260.1 | 57.857 | 140 | 54 | 4 | 18 | 155 | 5 | 141 | 1.78e-47 | 160 |
Msa1369040 | AT5G46590.2 | 58.015 | 131 | 51 | 3 | 19 | 147 | 6 | 134 | 3.55e-47 | 154 |
Msa1369040 | AT5G46590.1 | 58.015 | 131 | 51 | 3 | 19 | 147 | 6 | 134 | 5.85e-47 | 154 |
Msa1369040 | AT1G65910.1 | 58.779 | 131 | 49 | 3 | 19 | 147 | 6 | 133 | 6.58e-47 | 161 |
Msa1369040 | AT1G77450.1 | 56.589 | 129 | 52 | 2 | 19 | 147 | 10 | 134 | 8.51e-47 | 153 |
Msa1369040 | AT2G02450.1 | 57.692 | 130 | 53 | 2 | 21 | 150 | 53 | 180 | 1.11e-46 | 156 |
Msa1369040 | AT2G02450.2 | 57.692 | 130 | 53 | 2 | 21 | 150 | 53 | 180 | 1.45e-46 | 156 |
Msa1369040 | AT1G54330.1 | 59.091 | 132 | 49 | 3 | 18 | 147 | 5 | 133 | 1.47e-45 | 151 |
Msa1369040 | AT1G26870.1 | 51.449 | 138 | 66 | 1 | 9 | 146 | 6 | 142 | 2.07e-45 | 154 |
Msa1369040 | AT3G15500.1 | 56.589 | 129 | 53 | 2 | 19 | 147 | 14 | 139 | 2.64e-45 | 151 |
Msa1369040 | AT1G52890.1 | 56.589 | 129 | 53 | 2 | 19 | 147 | 14 | 139 | 3.84e-45 | 150 |
Msa1369040 | AT3G15510.1 | 56.000 | 125 | 54 | 1 | 23 | 147 | 21 | 144 | 4.42e-45 | 151 |
Msa1369040 | AT5G04410.1 | 55.147 | 136 | 56 | 3 | 19 | 152 | 9 | 141 | 1.95e-44 | 154 |
Msa1369040 | AT4G17980.1 | 54.962 | 131 | 56 | 2 | 19 | 147 | 6 | 135 | 2.32e-44 | 147 |
Msa1369040 | AT3G10500.1 | 55.725 | 131 | 53 | 3 | 19 | 147 | 9 | 136 | 3.45e-44 | 152 |
Msa1369040 | AT4G17980.2 | 54.962 | 131 | 56 | 2 | 19 | 147 | 6 | 135 | 3.90e-44 | 147 |
Msa1369040 | AT4G35580.1 | 54.135 | 133 | 54 | 4 | 17 | 146 | 7 | 135 | 7.36e-44 | 151 |
Msa1369040 | AT5G13180.1 | 54.264 | 129 | 55 | 2 | 19 | 147 | 14 | 138 | 8.36e-44 | 145 |
Msa1369040 | AT4G35580.2 | 54.135 | 133 | 54 | 4 | 17 | 146 | 7 | 135 | 1.06e-43 | 151 |
Msa1369040 | AT4G35580.3 | 54.135 | 133 | 54 | 4 | 17 | 146 | 7 | 135 | 1.12e-43 | 151 |
Msa1369040 | AT3G10480.1 | 57.576 | 132 | 49 | 4 | 19 | 147 | 27 | 154 | 1.61e-43 | 149 |
Msa1369040 | AT1G33060.1 | 55.303 | 132 | 54 | 3 | 17 | 146 | 22 | 150 | 1.62e-43 | 152 |
Msa1369040 | AT1G33060.2 | 55.303 | 132 | 54 | 3 | 17 | 146 | 22 | 150 | 1.66e-43 | 152 |
Msa1369040 | AT3G10480.2 | 57.576 | 132 | 49 | 4 | 19 | 147 | 27 | 154 | 1.88e-43 | 149 |
Msa1369040 | AT2G43000.1 | 50.714 | 140 | 65 | 3 | 10 | 149 | 10 | 145 | 2.29e-43 | 145 |
Msa1369040 | AT4G27410.3 | 48.428 | 159 | 60 | 4 | 19 | 160 | 14 | 167 | 2.80e-43 | 145 |
Msa1369040 | AT3G10490.1 | 55.303 | 132 | 52 | 4 | 19 | 147 | 27 | 154 | 1.18e-42 | 142 |
Msa1369040 | AT5G24590.2 | 51.429 | 140 | 62 | 4 | 10 | 146 | 4 | 140 | 2.65e-42 | 146 |
Msa1369040 | AT2G17040.1 | 48.252 | 143 | 69 | 4 | 21 | 160 | 8 | 148 | 3.80e-42 | 142 |
Msa1369040 | AT5G61430.2 | 80.000 | 80 | 14 | 1 | 68 | 147 | 1 | 78 | 4.56e-42 | 141 |
Msa1369040 | AT1G34190.1 | 55.814 | 129 | 52 | 4 | 21 | 147 | 18 | 143 | 5.60e-42 | 147 |
Msa1369040 | AT3G10490.2 | 55.303 | 132 | 52 | 4 | 19 | 147 | 27 | 154 | 1.86e-41 | 144 |
Msa1369040 | AT3G49530.2 | 50.725 | 138 | 62 | 4 | 19 | 153 | 13 | 147 | 2.21e-41 | 143 |
Msa1369040 | AT3G49530.1 | 49.645 | 141 | 65 | 4 | 19 | 156 | 13 | 150 | 4.45e-41 | 143 |
Msa1369040 | AT1G34180.3 | 54.615 | 130 | 52 | 5 | 21 | 147 | 18 | 143 | 5.71e-41 | 142 |
Msa1369040 | AT1G34180.1 | 54.615 | 130 | 52 | 5 | 21 | 147 | 18 | 143 | 2.58e-40 | 142 |
Msa1369040 | AT2G27300.1 | 52.632 | 133 | 57 | 4 | 18 | 148 | 13 | 141 | 3.11e-40 | 138 |
Msa1369040 | AT1G52880.1 | 55.118 | 127 | 54 | 2 | 23 | 147 | 21 | 146 | 8.26e-40 | 137 |
Msa1369040 | AT2G33480.1 | 53.488 | 129 | 54 | 3 | 19 | 147 | 15 | 137 | 1.30e-39 | 135 |
Msa1369040 | AT2G33480.2 | 53.488 | 129 | 54 | 3 | 19 | 147 | 15 | 137 | 1.33e-39 | 135 |
Msa1369040 | AT1G34180.4 | 50.000 | 142 | 52 | 5 | 21 | 147 | 18 | 155 | 4.06e-39 | 138 |
Msa1369040 | AT3G12910.1 | 47.333 | 150 | 73 | 5 | 3 | 147 | 2 | 150 | 1.14e-38 | 133 |
Msa1369040 | AT1G34180.2 | 50.000 | 142 | 52 | 5 | 21 | 147 | 18 | 155 | 1.62e-38 | 137 |
Msa1369040 | AT1G32870.2 | 55.639 | 133 | 52 | 5 | 18 | 148 | 9 | 136 | 2.54e-38 | 136 |
Msa1369040 | AT1G32870.1 | 55.639 | 133 | 52 | 5 | 18 | 148 | 9 | 136 | 2.57e-38 | 137 |
Msa1369040 | AT1G32870.3 | 55.639 | 133 | 52 | 5 | 18 | 148 | 45 | 172 | 3.61e-38 | 137 |
Msa1369040 | AT3G10480.3 | 45.783 | 166 | 50 | 4 | 18 | 147 | 26 | 187 | 7.68e-38 | 135 |
Msa1369040 | AT1G32510.1 | 52.941 | 136 | 56 | 3 | 19 | 147 | 6 | 140 | 1.19e-37 | 130 |
Msa1369040 | AT5G09330.5 | 49.618 | 131 | 61 | 4 | 19 | 147 | 6 | 133 | 7.18e-37 | 132 |
Msa1369040 | AT5G09330.2 | 49.618 | 131 | 61 | 4 | 19 | 147 | 6 | 133 | 7.18e-37 | 132 |
Msa1369040 | AT5G09330.4 | 49.618 | 131 | 61 | 4 | 19 | 147 | 6 | 133 | 7.18e-37 | 132 |
Msa1369040 | AT5G09330.3 | 49.618 | 131 | 61 | 4 | 19 | 147 | 6 | 133 | 7.18e-37 | 132 |
Msa1369040 | AT5G09330.1 | 49.618 | 131 | 61 | 4 | 19 | 147 | 6 | 133 | 7.18e-37 | 132 |
Msa1369040 | AT4G28530.2 | 49.219 | 128 | 50 | 1 | 19 | 131 | 10 | 137 | 1.22e-36 | 128 |
Msa1369040 | AT1G56010.1 | 62.222 | 90 | 32 | 1 | 68 | 157 | 1 | 88 | 1.86e-35 | 124 |
Msa1369040 | AT5G64060.1 | 45.802 | 131 | 66 | 3 | 19 | 147 | 6 | 133 | 9.59e-35 | 124 |
Msa1369040 | AT5G22290.1 | 42.553 | 141 | 77 | 3 | 21 | 160 | 23 | 160 | 2.65e-34 | 123 |
Msa1369040 | AT5G04395.1 | 42.466 | 146 | 69 | 3 | 16 | 147 | 25 | 169 | 1.24e-33 | 117 |
Msa1369040 | AT3G44290.2 | 47.244 | 127 | 61 | 4 | 21 | 145 | 16 | 138 | 3.23e-33 | 117 |
Msa1369040 | AT3G44290.1 | 47.244 | 127 | 61 | 4 | 21 | 145 | 16 | 138 | 2.40e-32 | 117 |
Msa1369040 | AT3G12977.2 | 56.989 | 93 | 36 | 2 | 65 | 155 | 10 | 100 | 2.67e-32 | 115 |
Msa1369040 | AT4G10350.2 | 63.953 | 86 | 26 | 2 | 65 | 147 | 7 | 90 | 1.23e-30 | 112 |
Msa1369040 | AT3G44350.1 | 41.791 | 134 | 69 | 3 | 19 | 146 | 5 | 135 | 1.00e-27 | 101 |
Msa1369040 | AT4G01550.1 | 40.310 | 129 | 74 | 2 | 22 | 147 | 7 | 135 | 4.78e-27 | 105 |
Msa1369040 | AT3G44350.2 | 41.985 | 131 | 67 | 3 | 22 | 146 | 8 | 135 | 5.03e-27 | 102 |
Msa1369040 | AT4G01520.1 | 35.606 | 132 | 81 | 3 | 20 | 147 | 5 | 136 | 3.08e-26 | 101 |
Msa1369040 | AT5G22380.1 | 42.636 | 129 | 68 | 4 | 22 | 145 | 8 | 135 | 1.00e-25 | 98.6 |
Msa1369040 | AT2G33480.3 | 58.667 | 75 | 29 | 1 | 73 | 147 | 8 | 80 | 6.57e-25 | 95.5 |
Msa1369040 | AT4G01540.4 | 36.154 | 130 | 79 | 3 | 22 | 147 | 7 | 136 | 9.90e-25 | 98.6 |
Msa1369040 | AT4G01540.3 | 36.154 | 130 | 79 | 3 | 22 | 147 | 7 | 136 | 1.49e-24 | 98.2 |
Msa1369040 | AT4G01540.2 | 36.154 | 130 | 79 | 3 | 22 | 147 | 7 | 136 | 1.62e-24 | 98.2 |
Msa1369040 | AT4G01540.1 | 36.154 | 130 | 79 | 3 | 22 | 147 | 7 | 136 | 2.01e-24 | 98.2 |
Msa1369040 | AT3G04420.2 | 38.255 | 149 | 78 | 5 | 20 | 160 | 4 | 146 | 4.73e-24 | 95.1 |
Msa1369040 | AT3G04420.1 | 38.255 | 149 | 78 | 5 | 20 | 160 | 4 | 146 | 7.14e-24 | 95.5 |
Msa1369040 | AT5G64530.2 | 38.760 | 129 | 66 | 3 | 19 | 147 | 3 | 118 | 9.83e-24 | 91.3 |
Msa1369040 | AT5G64530.1 | 38.760 | 129 | 66 | 3 | 19 | 147 | 3 | 118 | 1.71e-23 | 91.3 |
Msa1369040 | AT1G02230.1 | 39.597 | 149 | 77 | 7 | 20 | 160 | 4 | 147 | 2.83e-23 | 94.4 |
Msa1369040 | AT1G02250.1 | 36.913 | 149 | 81 | 6 | 20 | 160 | 4 | 147 | 3.74e-22 | 91.3 |
Msa1369040 | AT1G01010.1 | 39.850 | 133 | 69 | 5 | 22 | 145 | 6 | 136 | 7.24e-20 | 85.5 |
Msa1369040 | AT2G18060.2 | 63.158 | 57 | 19 | 1 | 98 | 154 | 2 | 56 | 3.00e-19 | 82.0 |
Msa1369040 | AT1G02220.1 | 35.862 | 145 | 84 | 5 | 20 | 160 | 4 | 143 | 4.85e-19 | 82.8 |
Msa1369040 | AT3G10490.4 | 69.091 | 55 | 15 | 1 | 93 | 147 | 2 | 54 | 1.89e-18 | 80.9 |
Msa1369040 | AT3G10490.3 | 69.091 | 55 | 15 | 1 | 93 | 147 | 2 | 54 | 1.89e-18 | 80.9 |
Msa1369040 | AT2G43000.2 | 53.623 | 69 | 30 | 1 | 81 | 149 | 1 | 67 | 5.74e-18 | 77.4 |
Msa1369040 | AT5G50820.1 | 35.766 | 137 | 69 | 6 | 19 | 149 | 17 | 140 | 9.06e-16 | 71.2 |
Msa1369040 | AT5G22290.2 | 48.387 | 62 | 30 | 1 | 99 | 160 | 2 | 61 | 3.85e-15 | 70.5 |
Msa1369040 | AT3G55210.1 | 31.210 | 157 | 91 | 5 | 19 | 160 | 11 | 165 | 5.81e-15 | 70.5 |
Msa1369040 | AT3G04430.1 | 31.915 | 141 | 79 | 5 | 25 | 154 | 6 | 140 | 4.08e-14 | 67.0 |
Msa1369040 | AT3G56530.1 | 30.597 | 134 | 89 | 3 | 18 | 149 | 51 | 182 | 1.12e-13 | 67.4 |
Msa1369040 | AT1G28470.1 | 32.895 | 152 | 82 | 6 | 14 | 149 | 72 | 219 | 2.51e-11 | 60.8 |
Find 41 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAGTAGTAGATCCCTTT+TGG | 0.256195 | tig0018693:+20289 | Msa1369040:CDS |
AAGGTCTACCACCTGGTTTC+AGG | 0.277471 | tig0018693:+19644 | Msa1369040:CDS |
AACCTTAGAAGCCAAATAAA+AGG | 0.317144 | tig0018693:-19695 | None:intergenic |
GAGCAACAAGTGCTGGTTAC+TGG | 0.324307 | tig0018693:+20234 | Msa1369040:CDS |
GAGTGTAGAGTCTACCTTGC+AGG | 0.354307 | tig0018693:-20426 | None:intergenic |
GCTGGTTACTGGAAAGCAAC+TGG | 0.394693 | tig0018693:+20245 | Msa1369040:CDS |
TGTGAGCCATGGGAACTTCC+AGG | 0.411730 | tig0018693:+19772 | Msa1369040:CDS |
CTCGTGGTGAAAAGACCAAA+TGG | 0.412457 | tig0018693:+20351 | Msa1369040:CDS |
CTGTTTGTTCTAAGCCCGGT+TGG | 0.442926 | tig0018693:-20212 | None:intergenic |
GTGCGCAGAAATGGCAAAGA+TGG | 0.456021 | tig0018693:+20145 | Msa1369040:intron |
GTACTCATGCATGACCCATT+TGG | 0.462977 | tig0018693:-20366 | None:intergenic |
TGTTTGTTCTAAGCCCGGTT+GGG | 0.465037 | tig0018693:-20211 | None:intergenic |
GGGTCTTCTTCATCCCCAAA+AGG | 0.475040 | tig0018693:-20304 | None:intergenic |
TGCTCTGTTTGTTCTAAGCC+CGG | 0.476611 | tig0018693:-20216 | None:intergenic |
CCCTTCCTTTGTAGAAAACA+AGG | 0.478110 | tig0018693:-20325 | None:intergenic |
AGAGACAGAAAATACCCAAC+CGG | 0.485624 | tig0018693:+20197 | Msa1369040:CDS |
AAAAGTGATGAGAGTGTAAA+CGG | 0.494516 | tig0018693:-20388 | None:intergenic |
TAATGAGTTCTTCATCAGTT+GGG | 0.509577 | tig0018693:-19672 | None:intergenic |
GTAATGAGTTCTTCATCAGT+TGG | 0.518253 | tig0018693:-19673 | None:intergenic |
ACAAACAGAGCAACAAGTGC+TGG | 0.530692 | tig0018693:+20227 | Msa1369040:CDS |
GGTCTTCTTCATCCCCAAAA+GGG | 0.552052 | tig0018693:-20303 | None:intergenic |
CCCATGGCTCACATCTATTG+AGG | 0.558723 | tig0018693:-19762 | None:intergenic |
ACCTCAATAGATGTGAGCCA+TGG | 0.559776 | tig0018693:+19761 | Msa1369040:CDS |
TCGTGGTGAAAAGACCAAAT+GGG | 0.562515 | tig0018693:+20352 | Msa1369040:CDS |
TCCCAGTATGATGTTAGCAA+TGG | 0.563508 | tig0018693:+19576 | None:intergenic |
CTGGTTACTGGAAAGCAACT+GGG | 0.568979 | tig0018693:+20246 | Msa1369040:CDS |
TGCGCAGAAATGGCAAAGAT+GGG | 0.576663 | tig0018693:+20146 | Msa1369040:intron |
CAAAGATGGGAGAAAGAGAG+TGG | 0.580922 | tig0018693:+20159 | Msa1369040:CDS |
TCCTTCTCATACCACCTGCA+AGG | 0.587913 | tig0018693:+20412 | Msa1369040:CDS |
ACCTTGCAGGTGGTATGAGA+AGG | 0.591967 | tig0018693:-20413 | None:intergenic |
AAAATACCTGGAAGTTCCCA+TGG | 0.594367 | tig0018693:-19778 | None:intergenic |
CCTCAATAGATGTGAGCCAT+GGG | 0.602795 | tig0018693:+19762 | Msa1369040:CDS |
GAAAGCAACTGGGAAGGACA+AGG | 0.641859 | tig0018693:+20256 | Msa1369040:CDS |
GAGACAGAAAATACCCAACC+GGG | 0.645170 | tig0018693:+20198 | Msa1369040:CDS |
GTTGGGTGAAACCTGAAACC+AGG | 0.645484 | tig0018693:-19655 | None:intergenic |
AACGAACAAGGTCTACCACC+TGG | 0.649637 | tig0018693:+19637 | Msa1369040:CDS |
CCTTCCTTTGTAGAAAACAA+GGG | 0.658759 | tig0018693:-20324 | None:intergenic |
TTACTGGAAAGCAACTGGGA+AGG | 0.681913 | tig0018693:+20250 | Msa1369040:CDS |
TGTAGAGTCTACCTTGCAGG+TGG | 0.682650 | tig0018693:-20423 | None:intergenic |
TACAAAGGAAGGGCCCCTCG+TGG | 0.684378 | tig0018693:+20335 | Msa1369040:CDS |
GGGTGAAACCTGAAACCAGG+TGG | 0.745805 | tig0018693:-19652 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAACAAAATATTAATACCT+AGG | - | tig0018693:20054-20073 | None:intergenic | 15.0% |
!! | ATAACAAAATATTAATACCT+AGG | - | tig0018693:20054-20073 | None:intergenic | 15.0% |
!!! | GTTACTAGATTTAAAATGAA+TGG | + | tig0018693:20014-20033 | Msa1369040:intron | 20.0% |
!!! | GTTACTAGATTTAAAATGAA+TGG | + | tig0018693:20014-20033 | Msa1369040:intron | 20.0% |
!! | AGAACTCATTACCTTTTATT+TGG | + | tig0018693:19684-19703 | Msa1369040:CDS | 25.0% |
!! | TGTCTTATTATTAGGTTCAA+GGG | - | tig0018693:19974-19993 | None:intergenic | 25.0% |
!! | ATGTCTTATTATTAGGTTCA+AGG | - | tig0018693:19975-19994 | None:intergenic | 25.0% |
!! | GCACAATATGTCTTATTATT+AGG | - | tig0018693:19982-20001 | None:intergenic | 25.0% |
! | ATCTAGTAACTAGATATGAT+AGG | - | tig0018693:20004-20023 | None:intergenic | 25.0% |
!! | ACTAGATTTAAAATGAATGG+TGG | + | tig0018693:20017-20036 | Msa1369040:intron | 25.0% |
! | ATTTATGCAATAAAGAGAAG+TGG | - | tig0018693:20105-20124 | None:intergenic | 25.0% |
! | TAAATGTTGAATTGAACGAA+TGG | + | tig0018693:20120-20139 | Msa1369040:intron | 25.0% |
!! | AGAACTCATTACCTTTTATT+TGG | + | tig0018693:19684-19703 | Msa1369040:CDS | 25.0% |
!! | TGTCTTATTATTAGGTTCAA+GGG | - | tig0018693:19974-19993 | None:intergenic | 25.0% |
!! | ATGTCTTATTATTAGGTTCA+AGG | - | tig0018693:19975-19994 | None:intergenic | 25.0% |
!! | GCACAATATGTCTTATTATT+AGG | - | tig0018693:19982-20001 | None:intergenic | 25.0% |
! | ATCTAGTAACTAGATATGAT+AGG | - | tig0018693:20004-20023 | None:intergenic | 25.0% |
!! | ACTAGATTTAAAATGAATGG+TGG | + | tig0018693:20017-20036 | Msa1369040:intron | 25.0% |
! | ATTTATGCAATAAAGAGAAG+TGG | - | tig0018693:20105-20124 | None:intergenic | 25.0% |
! | TAAATGTTGAATTGAACGAA+TGG | + | tig0018693:20120-20139 | Msa1369040:intron | 25.0% |
CATGAAAAGAAAAACGAACA+AGG | + | tig0018693:19625-19644 | Msa1369040:CDS | 30.0% | |
TAATGAGTTCTTCATCAGTT+GGG | - | tig0018693:19675-19694 | None:intergenic | 30.0% | |
!! | TACCTTTTATTTGGCTTCTA+AGG | + | tig0018693:19693-19712 | Msa1369040:CDS | 30.0% |
AACCTTAGAAGCCAAATAAA+AGG | - | tig0018693:19698-19717 | None:intergenic | 30.0% | |
AAATAGTTCAAATTCCTCTC+AGG | + | tig0018693:19876-19895 | Msa1369040:intron | 30.0% | |
TATGTCCACTTATGTTAAGT+AGG | + | tig0018693:20071-20090 | Msa1369040:intron | 30.0% | |
ATGTCCACTTATGTTAAGTA+GGG | + | tig0018693:20072-20091 | Msa1369040:intron | 30.0% | |
! | AAAAGTGATGAGAGTGTAAA+CGG | - | tig0018693:20391-20410 | None:intergenic | 30.0% |
CATGAAAAGAAAAACGAACA+AGG | + | tig0018693:19625-19644 | Msa1369040:CDS | 30.0% | |
TAATGAGTTCTTCATCAGTT+GGG | - | tig0018693:19675-19694 | None:intergenic | 30.0% | |
!! | TACCTTTTATTTGGCTTCTA+AGG | + | tig0018693:19693-19712 | Msa1369040:CDS | 30.0% |
AACCTTAGAAGCCAAATAAA+AGG | - | tig0018693:19698-19717 | None:intergenic | 30.0% | |
AAATAGTTCAAATTCCTCTC+AGG | + | tig0018693:19876-19895 | Msa1369040:intron | 30.0% | |
TATGTCCACTTATGTTAAGT+AGG | + | tig0018693:20071-20090 | Msa1369040:intron | 30.0% | |
ATGTCCACTTATGTTAAGTA+GGG | + | tig0018693:20072-20091 | Msa1369040:intron | 30.0% | |
! | AAAAGTGATGAGAGTGTAAA+CGG | - | tig0018693:20391-20410 | None:intergenic | 30.0% |
GTAATGAGTTCTTCATCAGT+TGG | - | tig0018693:19676-19695 | None:intergenic | 35.0% | |
TCATGTGAGTAGAAAATACC+TGG | - | tig0018693:19793-19812 | None:intergenic | 35.0% | |
CTACAGTATCTTGTTCATGT+TGG | - | tig0018693:19816-19835 | None:intergenic | 35.0% | |
TGCATGTCTAGTAAATGTGA+CGG | + | tig0018693:19842-19861 | Msa1369040:intron | 35.0% | |
TAGATAGAATTACACCTGAG+AGG | - | tig0018693:19893-19912 | None:intergenic | 35.0% | |
CTTATTATTAGGTTCAAGGG+TGG | - | tig0018693:19971-19990 | None:intergenic | 35.0% | |
TGTCCACTTATGTTAAGTAG+GGG | + | tig0018693:20073-20092 | Msa1369040:intron | 35.0% | |
!!! | AAGACCCTTGTTTTCTACAA+AGG | + | tig0018693:20320-20339 | Msa1369040:CDS | 35.0% |
CCTTCCTTTGTAGAAAACAA+GGG | - | tig0018693:20327-20346 | None:intergenic | 35.0% | |
!!! | CCTTGTTTTCTACAAAGGAA+GGG | + | tig0018693:20325-20344 | Msa1369040:CDS | 35.0% |
GTAATGAGTTCTTCATCAGT+TGG | - | tig0018693:19676-19695 | None:intergenic | 35.0% | |
TCATGTGAGTAGAAAATACC+TGG | - | tig0018693:19793-19812 | None:intergenic | 35.0% | |
CTACAGTATCTTGTTCATGT+TGG | - | tig0018693:19816-19835 | None:intergenic | 35.0% | |
TGCATGTCTAGTAAATGTGA+CGG | + | tig0018693:19842-19861 | Msa1369040:intron | 35.0% | |
TAGATAGAATTACACCTGAG+AGG | - | tig0018693:19893-19912 | None:intergenic | 35.0% | |
CTTATTATTAGGTTCAAGGG+TGG | - | tig0018693:19971-19990 | None:intergenic | 35.0% | |
TGTCCACTTATGTTAAGTAG+GGG | + | tig0018693:20073-20092 | Msa1369040:intron | 35.0% | |
!!! | AAGACCCTTGTTTTCTACAA+AGG | + | tig0018693:20320-20339 | Msa1369040:CDS | 35.0% |
CCTTCCTTTGTAGAAAACAA+GGG | - | tig0018693:20327-20346 | None:intergenic | 35.0% | |
!!! | CCTTGTTTTCTACAAAGGAA+GGG | + | tig0018693:20325-20344 | Msa1369040:CDS | 35.0% |
AAAATACCTGGAAGTTCCCA+TGG | - | tig0018693:19781-19800 | None:intergenic | 40.0% | |
GTCCACTTATGTTAAGTAGG+GGG | + | tig0018693:20074-20093 | Msa1369040:intron | 40.0% | |
AACCCCCTACTTAACATAAG+TGG | - | tig0018693:20079-20098 | None:intergenic | 40.0% | |
AGAGACAGAAAATACCCAAC+CGG | + | tig0018693:20197-20216 | Msa1369040:CDS | 40.0% | |
! | TGCAGTAGTAGATCCCTTTT+GGG | + | tig0018693:20290-20309 | Msa1369040:CDS | 40.0% |
!!! | CCCTTGTTTTCTACAAAGGA+AGG | + | tig0018693:20324-20343 | Msa1369040:CDS | 40.0% |
CCCTTCCTTTGTAGAAAACA+AGG | - | tig0018693:20328-20347 | None:intergenic | 40.0% | |
!! | ATTTGGTCTTTTCACCACGA+GGG | - | tig0018693:20352-20371 | None:intergenic | 40.0% |
TCGTGGTGAAAAGACCAAAT+GGG | + | tig0018693:20352-20371 | Msa1369040:CDS | 40.0% | |
AAAATACCTGGAAGTTCCCA+TGG | - | tig0018693:19781-19800 | None:intergenic | 40.0% | |
GTCCACTTATGTTAAGTAGG+GGG | + | tig0018693:20074-20093 | Msa1369040:intron | 40.0% | |
AACCCCCTACTTAACATAAG+TGG | - | tig0018693:20079-20098 | None:intergenic | 40.0% | |
AGAGACAGAAAATACCCAAC+CGG | + | tig0018693:20197-20216 | Msa1369040:CDS | 40.0% | |
! | TGCAGTAGTAGATCCCTTTT+GGG | + | tig0018693:20290-20309 | Msa1369040:CDS | 40.0% |
!!! | CCCTTGTTTTCTACAAAGGA+AGG | + | tig0018693:20324-20343 | Msa1369040:CDS | 40.0% |
CCCTTCCTTTGTAGAAAACA+AGG | - | tig0018693:20328-20347 | None:intergenic | 40.0% | |
!! | ATTTGGTCTTTTCACCACGA+GGG | - | tig0018693:20352-20371 | None:intergenic | 40.0% |
TCGTGGTGAAAAGACCAAAT+GGG | + | tig0018693:20352-20371 | Msa1369040:CDS | 40.0% | |
ACCTCAATAGATGTGAGCCA+TGG | + | tig0018693:19761-19780 | Msa1369040:CDS | 45.0% | |
CCTCAATAGATGTGAGCCAT+GGG | + | tig0018693:19762-19781 | Msa1369040:CDS | 45.0% | |
TATTAGGTTCAAGGGTGGAG+AGG | - | tig0018693:19966-19985 | None:intergenic | 45.0% | |
TGCGCAGAAATGGCAAAGAT+GGG | + | tig0018693:20146-20165 | Msa1369040:intron | 45.0% | |
CAAAGATGGGAGAAAGAGAG+TGG | + | tig0018693:20159-20178 | Msa1369040:CDS | 45.0% | |
GAGACAGAAAATACCCAACC+GGG | + | tig0018693:20198-20217 | Msa1369040:CDS | 45.0% | |
! | TGTTTGTTCTAAGCCCGGTT+GGG | - | tig0018693:20214-20233 | None:intergenic | 45.0% |
! | TGCTCTGTTTGTTCTAAGCC+CGG | - | tig0018693:20219-20238 | None:intergenic | 45.0% |
ACAAACAGAGCAACAAGTGC+TGG | + | tig0018693:20227-20246 | Msa1369040:CDS | 45.0% | |
CTGGTTACTGGAAAGCAACT+GGG | + | tig0018693:20246-20265 | Msa1369040:CDS | 45.0% | |
TTACTGGAAAGCAACTGGGA+AGG | + | tig0018693:20250-20269 | Msa1369040:CDS | 45.0% | |
! | CTGCAGTAGTAGATCCCTTT+TGG | + | tig0018693:20289-20308 | Msa1369040:CDS | 45.0% |
! | GCAGTAGTAGATCCCTTTTG+GGG | + | tig0018693:20291-20310 | Msa1369040:CDS | 45.0% |
GGTCTTCTTCATCCCCAAAA+GGG | - | tig0018693:20306-20325 | None:intergenic | 45.0% | |
!! | TTTGGTCTTTTCACCACGAG+GGG | - | tig0018693:20351-20370 | None:intergenic | 45.0% |
!! | CATTTGGTCTTTTCACCACG+AGG | - | tig0018693:20353-20372 | None:intergenic | 45.0% |
CTCGTGGTGAAAAGACCAAA+TGG | + | tig0018693:20351-20370 | Msa1369040:CDS | 45.0% | |
GTACTCATGCATGACCCATT+TGG | - | tig0018693:20369-20388 | None:intergenic | 45.0% | |
ACCTCAATAGATGTGAGCCA+TGG | + | tig0018693:19761-19780 | Msa1369040:CDS | 45.0% | |
CCTCAATAGATGTGAGCCAT+GGG | + | tig0018693:19762-19781 | Msa1369040:CDS | 45.0% | |
TATTAGGTTCAAGGGTGGAG+AGG | - | tig0018693:19966-19985 | None:intergenic | 45.0% | |
TGCGCAGAAATGGCAAAGAT+GGG | + | tig0018693:20146-20165 | Msa1369040:intron | 45.0% | |
CAAAGATGGGAGAAAGAGAG+TGG | + | tig0018693:20159-20178 | Msa1369040:CDS | 45.0% | |
GAGACAGAAAATACCCAACC+GGG | + | tig0018693:20198-20217 | Msa1369040:CDS | 45.0% | |
! | TGTTTGTTCTAAGCCCGGTT+GGG | - | tig0018693:20214-20233 | None:intergenic | 45.0% |
! | TGCTCTGTTTGTTCTAAGCC+CGG | - | tig0018693:20219-20238 | None:intergenic | 45.0% |
ACAAACAGAGCAACAAGTGC+TGG | + | tig0018693:20227-20246 | Msa1369040:CDS | 45.0% | |
CTGGTTACTGGAAAGCAACT+GGG | + | tig0018693:20246-20265 | Msa1369040:CDS | 45.0% | |
TTACTGGAAAGCAACTGGGA+AGG | + | tig0018693:20250-20269 | Msa1369040:CDS | 45.0% | |
! | CTGCAGTAGTAGATCCCTTT+TGG | + | tig0018693:20289-20308 | Msa1369040:CDS | 45.0% |
! | GCAGTAGTAGATCCCTTTTG+GGG | + | tig0018693:20291-20310 | Msa1369040:CDS | 45.0% |
GGTCTTCTTCATCCCCAAAA+GGG | - | tig0018693:20306-20325 | None:intergenic | 45.0% | |
!! | TTTGGTCTTTTCACCACGAG+GGG | - | tig0018693:20351-20370 | None:intergenic | 45.0% |
!! | CATTTGGTCTTTTCACCACG+AGG | - | tig0018693:20353-20372 | None:intergenic | 45.0% |
CTCGTGGTGAAAAGACCAAA+TGG | + | tig0018693:20351-20370 | Msa1369040:CDS | 45.0% | |
GTACTCATGCATGACCCATT+TGG | - | tig0018693:20369-20388 | None:intergenic | 45.0% | |
AACGAACAAGGTCTACCACC+TGG | + | tig0018693:19637-19656 | Msa1369040:CDS | 50.0% | |
AAGGTCTACCACCTGGTTTC+AGG | + | tig0018693:19644-19663 | Msa1369040:CDS | 50.0% | |
GTTGGGTGAAACCTGAAACC+AGG | - | tig0018693:19658-19677 | None:intergenic | 50.0% | |
CCCATGGCTCACATCTATTG+AGG | - | tig0018693:19765-19784 | None:intergenic | 50.0% | |
CGAATGGTTGTGCGCAGAAA+TGG | + | tig0018693:20136-20155 | Msa1369040:intron | 50.0% | |
GTGCGCAGAAATGGCAAAGA+TGG | + | tig0018693:20145-20164 | Msa1369040:intron | 50.0% | |
! | CTGTTTGTTCTAAGCCCGGT+TGG | - | tig0018693:20215-20234 | None:intergenic | 50.0% |
!! | GAGCAACAAGTGCTGGTTAC+TGG | + | tig0018693:20234-20253 | Msa1369040:CDS | 50.0% |
GCTGGTTACTGGAAAGCAAC+TGG | + | tig0018693:20245-20264 | Msa1369040:CDS | 50.0% | |
GAAAGCAACTGGGAAGGACA+AGG | + | tig0018693:20256-20275 | Msa1369040:CDS | 50.0% | |
GGGTCTTCTTCATCCCCAAA+AGG | - | tig0018693:20307-20326 | None:intergenic | 50.0% | |
TCCTTCTCATACCACCTGCA+AGG | + | tig0018693:20412-20431 | Msa1369040:CDS | 50.0% | |
AACGAACAAGGTCTACCACC+TGG | + | tig0018693:19637-19656 | Msa1369040:CDS | 50.0% | |
AAGGTCTACCACCTGGTTTC+AGG | + | tig0018693:19644-19663 | Msa1369040:CDS | 50.0% | |
GTTGGGTGAAACCTGAAACC+AGG | - | tig0018693:19658-19677 | None:intergenic | 50.0% | |
CCCATGGCTCACATCTATTG+AGG | - | tig0018693:19765-19784 | None:intergenic | 50.0% | |
CGAATGGTTGTGCGCAGAAA+TGG | + | tig0018693:20136-20155 | Msa1369040:intron | 50.0% | |
GTGCGCAGAAATGGCAAAGA+TGG | + | tig0018693:20145-20164 | Msa1369040:intron | 50.0% | |
! | CTGTTTGTTCTAAGCCCGGT+TGG | - | tig0018693:20215-20234 | None:intergenic | 50.0% |
!! | GAGCAACAAGTGCTGGTTAC+TGG | + | tig0018693:20234-20253 | Msa1369040:CDS | 50.0% |
GCTGGTTACTGGAAAGCAAC+TGG | + | tig0018693:20245-20264 | Msa1369040:CDS | 50.0% | |
GAAAGCAACTGGGAAGGACA+AGG | + | tig0018693:20256-20275 | Msa1369040:CDS | 50.0% | |
GGGTCTTCTTCATCCCCAAA+AGG | - | tig0018693:20307-20326 | None:intergenic | 50.0% | |
GGGTGAAACCTGAAACCAGG+TGG | - | tig0018693:19655-19674 | None:intergenic | 55.0% | |
TGTGAGCCATGGGAACTTCC+AGG | + | tig0018693:19772-19791 | Msa1369040:CDS | 55.0% | |
TGGTGGCAGTTACACGTCCT+AGG | + | tig0018693:20034-20053 | Msa1369040:intron | 55.0% | |
GGGTGAAACCTGAAACCAGG+TGG | - | tig0018693:19655-19674 | None:intergenic | 55.0% | |
TGTGAGCCATGGGAACTTCC+AGG | + | tig0018693:19772-19791 | Msa1369040:CDS | 55.0% | |
TGGTGGCAGTTACACGTCCT+AGG | + | tig0018693:20034-20053 | Msa1369040:intron | 55.0% | |
TACAAAGGAAGGGCCCCTCG+TGG | + | tig0018693:20335-20354 | Msa1369040:CDS | 60.0% | |
TACAAAGGAAGGGCCCCTCG+TGG | + | tig0018693:20335-20354 | Msa1369040:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018693 | gene | 19588 | 20433 | 19588 | ID=Msa1369040;Name=Msa1369040 |
tig0018693 | mRNA | 19588 | 20433 | 19588 | ID=Msa1369040-mRNA-1;Parent=Msa1369040;Name=Msa1369040-mRNA-1;_AED=0.07;_eAED=0.07;_QI=7|1|0.5|1|1|1|2|0|160 |
tig0018693 | exon | 19588 | 19793 | 19588 | ID=Msa1369040-mRNA-1:exon:867;Parent=Msa1369040-mRNA-1 |
tig0018693 | exon | 20153 | 20433 | 20153 | ID=Msa1369040-mRNA-1:exon:868;Parent=Msa1369040-mRNA-1 |
tig0018693 | five_prime_UTR | 19588 | 19594 | 19588 | ID=Msa1369040-mRNA-1:five_prime_utr;Parent=Msa1369040-mRNA-1 |
tig0018693 | CDS | 19595 | 19793 | 19595 | ID=Msa1369040-mRNA-1:cds;Parent=Msa1369040-mRNA-1 |
tig0018693 | CDS | 20153 | 20433 | 20153 | ID=Msa1369040-mRNA-1:cds;Parent=Msa1369040-mRNA-1 |
Gene Sequence |
Protein sequence |