AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0751890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751890 MtrunA17_Chr5g0394111 83.450 713 56 5 13 725 1 651 0.0 1189
Msa0751890 MtrunA17_Chr2g0322731 52.388 712 300 14 23 720 79 765 0.0 693
Msa0751890 MtrunA17_Chr4g0024351 51.695 708 296 13 32 720 49 729 0.0 680
Msa0751890 MtrunA17_Chr8g0350321 42.453 742 382 14 12 720 77 806 0.0 571
Msa0751890 MtrunA17_Chr7g0246631 42.639 720 366 15 29 720 74 774 0.0 555
Msa0751890 MtrunA17_Chr1g0203671 39.831 708 385 14 43 720 93 789 1.06e-174 520
Msa0751890 MtrunA17_Chr2g0331581 38.450 684 372 13 49 720 143 789 2.18e-157 475
Msa0751890 MtrunA17_Chr6g0472471 38.187 728 382 16 37 720 62 765 1.37e-155 469
Msa0751890 MtrunA17_Chr6g0481041 36.351 718 392 16 45 720 29 723 1.25e-147 448
Msa0751890 MtrunA17_Chr5g0410711 35.286 768 425 22 1 720 35 778 6.20e-142 435
Msa0751890 MtrunA17_Chr2g0292731 34.375 512 296 13 230 721 58 549 6.25e-82 271
Msa0751890 MtrunA17_Chr7g0224451 34.568 486 240 15 45 516 16 437 1.40e-81 266
Msa0751890 MtrunA17_Chr2g0292741 34.016 488 301 10 241 721 63 536 1.37e-77 259
Msa0751890 MtrunA17_Chr2g0292761 33.401 491 290 11 237 721 82 541 9.24e-68 233
Msa0751890 MtrunA17_Chr7g0224491 37.888 322 154 9 416 720 1 293 2.40e-56 194
Msa0751890 MtrunA17_Chr7g0224481 33.858 381 183 12 45 413 16 339 2.44e-53 187
Msa0751890 MtrunA17_Chr2g0319671 44.068 177 84 3 286 461 103 265 5.26e-42 155
Msa0751890 MtrunA17_Chr2g0319681 29.004 231 151 4 497 720 1 225 2.19e-26 108
Msa0751890 MtrunA17_Chr1g0205981 38.049 205 98 7 100 292 1 188 2.34e-26 107
Msa0751890 MtrunA17_Chr2g0319701 32.456 228 137 7 501 720 5 223 6.06e-26 107
Msa0751890 MtrunA17_Chr2g0319691 44.248 113 54 1 347 459 1 104 1.10e-24 100
Msa0751890 MtrunA17_Chr5g0419821 37.589 141 78 3 34 164 14 154 1.39e-24 101
Msa0751890 MtrunA17_Chr2g0304191 35.385 130 83 1 242 370 1 130 5.22e-15 72.4
Msa0751890 MtrunA17_Chr7g0224461 40.496 121 52 3 613 720 1 114 1.65e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751890 AT4G04890.2 54.798 719 283 13 23 720 38 735 0.0 761
Msa0751890 AT4G04890.1 54.798 719 283 13 23 720 38 735 0.0 761
Msa0751890 AT4G21750.2 53.605 735 289 13 27 724 42 761 0.0 759
Msa0751890 AT4G21750.1 53.605 735 289 13 27 724 42 761 0.0 759
Msa0751890 AT4G21750.3 53.605 735 289 13 27 724 42 761 0.0 759
Msa0751890 AT4G21750.4 53.605 735 289 13 27 724 42 761 0.0 759
Msa0751890 AT1G05230.8 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.4 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.9 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.10 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.7 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.11 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.2 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.6 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.5 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.1 49.646 707 303 12 29 720 48 716 0.0 670
Msa0751890 AT1G05230.3 49.646 707 301 13 29 720 48 714 0.0 664
Msa0751890 AT1G05230.12 48.136 590 256 11 29 603 48 602 0.0 538
Msa0751890 AT4G00730.1 42.127 724 368 15 20 720 103 798 0.0 538
Msa0751890 AT3G61150.1 38.976 762 385 16 8 720 73 803 1.04e-176 526
Msa0751890 AT2G32370.1 40.548 693 359 16 41 717 62 717 7.04e-160 479
Msa0751890 AT5G52170.3 38.778 704 357 13 29 720 37 678 1.40e-157 472
Msa0751890 AT5G52170.1 38.778 704 357 13 29 720 37 678 1.40e-157 472
Msa0751890 AT5G52170.2 38.582 705 362 13 29 720 37 683 4.80e-156 468
Msa0751890 AT1G73360.1 37.955 714 373 18 45 720 32 713 4.50e-145 441
Msa0751890 AT1G17920.2 38.484 686 379 12 49 720 25 681 2.57e-144 438
Msa0751890 AT1G17920.1 38.484 686 379 12 49 720 25 681 2.57e-144 438
Msa0751890 AT1G79840.3 37.822 698 363 19 41 720 40 684 4.47e-144 437
Msa0751890 AT1G79840.6 37.822 698 363 19 41 720 40 684 4.47e-144 437
Msa0751890 AT1G79840.1 37.822 698 363 19 41 720 98 742 2.00e-143 438
Msa0751890 AT1G79840.2 37.822 698 363 19 41 720 127 771 5.41e-143 437
Msa0751890 AT5G46880.3 34.993 723 413 20 36 720 103 806 2.93e-125 393
Msa0751890 AT5G46880.1 34.993 723 413 20 36 720 103 806 2.93e-125 393
Msa0751890 AT5G46880.2 34.993 723 413 20 36 720 103 806 2.93e-125 393
Msa0751890 AT1G79840.4 37.937 572 294 16 41 600 98 620 3.60e-118 369
Msa0751890 AT3G03260.1 33.901 705 396 21 46 717 24 691 4.51e-112 355
Msa0751890 AT4G17710.1 34.146 697 374 20 37 721 81 704 5.75e-110 350
Msa0751890 AT4G25530.1 33.578 682 405 18 46 720 42 682 1.37e-108 345
Msa0751890 AT4G00730.2 39.323 473 246 10 20 474 103 552 1.16e-100 321
Msa0751890 AT5G17320.1 31.623 721 433 23 37 720 18 715 1.72e-93 306
Msa0751890 AT1G34650.1 30.986 710 426 20 50 720 21 705 9.48e-87 288
Msa0751890 AT1G79840.5 38.789 446 215 14 41 475 98 496 1.96e-86 282
Msa0751890 AT3G03260.2 32.967 546 316 17 46 572 24 538 1.65e-79 264
Msa0751890 AT5G07260.1 25.806 558 331 22 111 661 10 491 7.31e-28 119
Msa0751890 AT5G07260.2 25.719 556 329 21 111 661 10 486 2.65e-27 117

Find 202 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCACGCTCTGCTGATTT+TGG 0.190379 5_2:-5461114 Msa0751890:CDS
GTTAATTCTGGACTTGCTTT+TGG 0.195569 5_2:-5459926 Msa0751890:CDS
AACTGCATCCAGATGGAATA+TGG 0.242195 5_2:-5460270 Msa0751890:CDS
TCTCTTCTCTGAGCATCATT+AGG 0.259035 5_2:+5461906 None:intergenic
CCAACCAACGTCCCAGAAAA+AGG 0.260396 5_2:-5462114 Msa0751890:CDS
TCAATCTTTCTCTTATAATA+AGG 0.273417 5_2:-5463392 Msa0751890:intron
CCGCCAGCTTGAAAGGTATA+TGG 0.279189 5_2:-5461205 Msa0751890:intron
ATTTCAAATGGTCGTGATTC+TGG 0.286392 5_2:-5459324 Msa0751890:CDS
TATAAACCTCTAGTTAATTC+TGG 0.304749 5_2:-5459938 Msa0751890:CDS
AACAACCAGAGGGTCTTCTT+TGG 0.305258 5_2:+5460167 None:intergenic
TGGCTCCTCCGTACAGATTA+AGG 0.307811 5_2:-5461031 Msa0751890:CDS
TGGGACGTTGGTTGGGTTGT+TGG 0.321120 5_2:+5462122 None:intergenic
ACCCAACGCAAATCAAGTTT+TGG 0.325446 5_2:-5461860 Msa0751890:CDS
AACACCCTCCTTGGAGGAAC+TGG 0.338188 5_2:+5459520 None:intergenic
GAGAATTGCACTGATGTAAC+TGG 0.338466 5_2:-5459135 Msa0751890:CDS
AAGACCTTAGTAAGACCATT+TGG 0.339023 5_2:+5460130 None:intergenic
CGTCTTACTCTGCTTCCTTC+CGG 0.342730 5_2:-5459042 Msa0751890:CDS
ACAACCTCCGGTCCGTTTCC+AGG 0.348649 5_2:+5459631 None:intergenic
GTTTACAGTATCTCACAAAA+TGG 0.349194 5_2:+5460290 None:intergenic
CTCTTCTCTGAGCATCATTA+GGG 0.354899 5_2:+5461907 None:intergenic
CCAGATCCGACATTCATAAT+TGG 0.363963 5_2:+5458979 None:intergenic
GAGAATCTCAGTGACATAAT+TGG 0.367087 5_2:+5460909 None:intergenic
CTAATTTCATTATCTTCATA+AGG 0.371608 5_2:-5458812 Msa0751890:intron
TTATATAGGTTCAAACTGAT+AGG 0.374562 5_2:-5461580 Msa0751890:intron
ACAGCAACAAATTGATGAAA+TGG 0.376687 5_2:-5462074 Msa0751890:CDS
ACAACCAGAGGGTCTTCTTT+GGG 0.379392 5_2:+5460168 None:intergenic
AAGGAGCCTCCACGTTCATT+TGG 0.384232 5_2:+5462155 None:intergenic
ACTTACAGTGATACGAAATA+AGG 0.385266 5_2:+5459290 None:intergenic
ACCAAACTGGCTAGGACATA+TGG 0.389902 5_2:-5460952 Msa0751890:CDS
ATTGTTGGATGATGTTATAT+TGG 0.393371 5_2:+5461149 None:intergenic
GTTGTAGAGCTTGCTGTTGT+TGG 0.396518 5_2:-5460988 Msa0751890:CDS
TCCACATGCAAGGCTAGCTC+TGG 0.401494 5_2:-5458911 Msa0751890:CDS
CGGCGGTATAGTTCATGAAT+TGG 0.401952 5_2:-5459352 Msa0751890:CDS
CCAATTATGAATGTCGGATC+TGG 0.406349 5_2:-5458979 Msa0751890:CDS
ACACTTGAAGTCCTTTCAAC+TGG 0.406882 5_2:-5460494 Msa0751890:CDS
GCATTTGTTATGCACCCATC+TGG 0.409868 5_2:+5459006 None:intergenic
AAGTATTTCCCAAGGGCTAA+TGG 0.411663 5_2:-5460868 Msa0751890:CDS
AGACCTTAGTAAGACCATTT+GGG 0.416429 5_2:+5460131 None:intergenic
AAAGCTAAGATGACAAGCTT+GGG 0.419594 5_2:-5458490 Msa0751890:three_prime_UTR
AGAGAAGAGAGCTGAGCCTT+CGG 0.419978 5_2:-5461893 Msa0751890:CDS
GATTGGAGAATGCTCTCTTA+AGG 0.425885 5_2:-5461415 Msa0751890:CDS
AGCTTTAATCCCAATGTGTT+GGG 0.429957 5_2:+5460844 None:intergenic
CTCTGAGCATCATTAGGGTT+AGG 0.434546 5_2:+5461912 None:intergenic
TCCATATGTCCTAGCCAGTT+TGG 0.452823 5_2:+5460951 None:intergenic
GCCACTACCCATATTCCATC+TGG 0.457430 5_2:+5460262 None:intergenic
AGAAAATCAAACACCCTCCT+TGG 0.457924 5_2:+5459511 None:intergenic
ACCAAAACTTGATTTGCGTT+GGG 0.459278 5_2:+5461859 None:intergenic
TAATGAAATTAGATGCCATT+AGG 0.459795 5_2:+5458823 None:intergenic
TGACATTTCCCCAGCGGTAG+TGG 0.460740 5_2:+5461457 None:intergenic
GCAAGAACATGTATCAGAAT+AGG 0.464753 5_2:-5462204 Msa0751890:CDS
AAAACTGCAGTGATGCCTAA+TGG 0.465524 5_2:-5458838 Msa0751890:CDS
GACTTGAGTCGCCGCCAATC+AGG 0.466725 5_2:+5459064 None:intergenic
GGCTCCTCCGTACAGATTAA+GGG 0.467368 5_2:-5461030 Msa0751890:CDS
GCTAGCTTTAGTACAAGTAT+TGG 0.471031 5_2:-5459685 Msa0751890:CDS
GGTTGTTGGTCATCACTTGA+AGG 0.471173 5_2:+5462136 None:intergenic
TATAAGAGAAAGATTGATCA+TGG 0.471524 5_2:+5463398 None:intergenic
TGACGATCAGCAGCTAAGAT+TGG 0.471529 5_2:-5461432 Msa0751890:CDS
GTCATGACCATTACAACCTC+CGG 0.471659 5_2:+5459619 None:intergenic
CGCCAGCTTGAAAGGTATAT+GGG 0.472407 5_2:-5461204 Msa0751890:intron
TGTTGGGACCATTAGCCCTT+GGG 0.476328 5_2:+5460860 None:intergenic
GGAGAGGCTTTCAGTGTTGG+TGG 0.477054 5_2:-5461051 Msa0751890:CDS
TTGCTGTGTGTGGCGGCGAT+AGG 0.479639 5_2:+5462090 None:intergenic
ATGAGGATATCTACAAGATC+AGG 0.482347 5_2:+5460781 None:intergenic
GAATTGGCTCACATTTCAAA+TGG 0.482575 5_2:-5459336 Msa0751890:CDS
GCTAATGGTCCCAACACATT+GGG 0.483917 5_2:-5460853 Msa0751890:CDS
ACATTGGGATTAAAGCTTGA+GGG 0.484683 5_2:-5460838 Msa0751890:CDS
AACCAAAACTTGATTTGCGT+TGG 0.487544 5_2:+5461858 None:intergenic
AGAGCTTGCTGTTGTTGGAA+TGG 0.487738 5_2:-5460983 Msa0751890:CDS
GTTCTTCTACAACACATGCT+TGG 0.487768 5_2:-5459663 Msa0751890:CDS
AAACGGCCACCAACGTTCCA+CGG 0.489293 5_2:-5459850 Msa0751890:CDS
GTAGGAGAGGCTTTCAGTGT+TGG 0.489297 5_2:-5461054 Msa0751890:CDS
ATCAGGATTTCGTGCATTGT+AGG 0.492162 5_2:+5459081 None:intergenic
AATGGCTGAACTGACCAAAC+TGG 0.494651 5_2:-5460965 Msa0751890:CDS
AAGCTTTAATCCCAATGTGT+TGG 0.498683 5_2:+5460843 None:intergenic
TGCATTGTAGGTATTTGCAC+AGG 0.502791 5_2:+5459093 None:intergenic
TTTGGCTTCCAGTTCCTCCA+AGG 0.503857 5_2:-5459528 Msa0751890:CDS
CAAAGCTAAGATGACAAGCT+TGG 0.507346 5_2:-5458491 Msa0751890:three_prime_UTR
AAATGTAGAAGTTGATGATC+AGG 0.509315 5_2:-5459975 Msa0751890:CDS
ACAATGCACGAAATCCTGAT+TGG 0.509329 5_2:-5459078 Msa0751890:CDS
TATATAGGTTCAAACTGATA+GGG 0.512992 5_2:-5461579 Msa0751890:intron
GCTTCCAGTTCCTCCAAGGA+GGG 0.515083 5_2:-5459524 Msa0751890:CDS
GAGAGCTGAGCCTTCGGACC+GGG 0.516878 5_2:-5461887 Msa0751890:CDS
AGAGAGCTGAGCCTTCGGAC+CGG 0.520073 5_2:-5461888 Msa0751890:CDS
ACTGCATCCAGATGGAATAT+GGG 0.521116 5_2:-5460269 Msa0751890:CDS
GAAGTCCTTTCAACTGGAGT+GGG 0.523037 5_2:-5460488 Msa0751890:CDS
ATTGAATCTTGCGGAAAGGT+TGG 0.528383 5_2:-5459710 Msa0751890:CDS
AACGGCCACCAACGTTCCAC+GGG 0.530317 5_2:-5459849 Msa0751890:CDS
GGGTCTTAATGAGAAGCAAA+GGG 0.531547 5_2:-5461010 Msa0751890:CDS
AACAACATGAGTGCTATTGT+TGG 0.531872 5_2:+5461134 None:intergenic
TATGTCACTGAGATTCTCAA+TGG 0.532052 5_2:-5460904 Msa0751890:CDS
TGGACAAAGGTACCTGGAAA+CGG 0.533786 5_2:-5459643 Msa0751890:CDS
AAATCAAACACCCTCCTTGG+AGG 0.534430 5_2:+5459514 None:intergenic
AGGGTCTTAATGAGAAGCAA+AGG 0.534523 5_2:-5461011 Msa0751890:CDS
ATTAGTACTTACCACTTGCA+AGG 0.535950 5_2:+5460448 None:intergenic
CGGGAATCTGCAGGATCTGT+CGG 0.536557 5_2:+5461174 None:intergenic
GATTTGCGTTGGGTCTAACC+CGG 0.536665 5_2:+5461869 None:intergenic
TTGATTGAGACACTCCCAAA+TGG 0.537043 5_2:-5460145 Msa0751890:CDS
GAATGCTCTCTTAAGGAAAG+AGG 0.538971 5_2:-5461408 Msa0751890:intron
CGAGTAGGAACATGTGGGGA+GGG 0.539762 5_2:+5460319 None:intergenic
GTGTTGGGACCATTAGCCCT+TGG 0.540053 5_2:+5460859 None:intergenic
TGTGGAAGTTCCACTACCGC+TGG 0.541115 5_2:-5461467 Msa0751890:CDS
GGCTAATGGTCCCAACACAT+TGG 0.544303 5_2:-5460854 Msa0751890:CDS
CATGCTTGGACAAAGGTACC+TGG 0.544698 5_2:-5459649 Msa0751890:CDS
TGAAGTCCTTTCAACTGGAG+TGG 0.545864 5_2:-5460489 Msa0751890:CDS
AAACGGACCGGAGGTTGTAA+TGG 0.547300 5_2:-5459626 Msa0751890:CDS
CATCAATTTGTTGCTGTGTG+TGG 0.548832 5_2:+5462080 None:intergenic
ATTATGAATGTCGGATCTGG+AGG 0.550174 5_2:-5458976 Msa0751890:CDS
GGCTTCCAGTTCCTCCAAGG+AGG 0.551888 5_2:-5459525 Msa0751890:CDS
TACCTCCCACTCCAGTTGAA+AGG 0.552733 5_2:+5460483 None:intergenic
GATGGGTGCATAACAAATGC+AGG 0.554349 5_2:-5459003 Msa0751890:CDS
TACTGTAAACTGCATCCAGA+TGG 0.557363 5_2:-5460277 Msa0751890:CDS
TACAACACATGCTTGGACAA+AGG 0.558020 5_2:-5459656 Msa0751890:CDS
CACATTGGGATTAAAGCTTG+AGG 0.558168 5_2:-5460839 Msa0751890:CDS
GCACTTAGCACTACACTGAC+GGG 0.561320 5_2:+5459562 None:intergenic
TTGGGTCTAACCCGGTCCGA+AGG 0.562141 5_2:+5461877 None:intergenic
AGCACTTAGCACTACACTGA+CGG 0.563954 5_2:+5459561 None:intergenic
CAGTGGGATATTCTCTCCGC+CGG 0.564704 5_2:-5459372 Msa0751890:CDS
ATGAAGTTAATAGATACAAG+GGG 0.565092 5_2:-5461514 Msa0751890:CDS
ACTCCCAAATGGTCTTACTA+AGG 0.567052 5_2:-5460134 Msa0751890:intron
AGAACCCAAAGAAGACCCTC+TGG 0.567375 5_2:-5460172 Msa0751890:CDS
CTGAACTGACCAAACTGGCT+AGG 0.569467 5_2:-5460960 Msa0751890:CDS
GAAAAGTATATTGAATCTTG+CGG 0.569980 5_2:-5459719 Msa0751890:CDS
ACAAGTCAATGAACGCACCT+TGG 0.570948 5_2:-5458458 Msa0751890:three_prime_UTR
GTGGAAGTTCCACTACCGCT+GGG 0.571737 5_2:-5461466 Msa0751890:CDS
AATTGGTGGGAAGCCAAAGA+GGG 0.573774 5_2:+5460926 None:intergenic
ATATTGGCACGGGAATCTGC+AGG 0.573994 5_2:+5461165 None:intergenic
GTTACCACATGCAACGTATG+TGG 0.576120 5_2:-5461485 Msa0751890:CDS
AATCTCAGTGACATAATTGG+TGG 0.578666 5_2:+5460912 None:intergenic
AGATGAAGTTAATAGATACA+AGG 0.578824 5_2:-5461516 Msa0751890:CDS
GGAGTTGCTGGTGGTAACAA+TGG 0.581415 5_2:-5461093 Msa0751890:CDS
ATTAAGACCCTTAATCTGTA+CGG 0.581991 5_2:+5461023 None:intergenic
TGATCTTGTAGATATCCTCA+TGG 0.582197 5_2:-5460779 Msa0751890:CDS
GGATGATGTTATATTGGCAC+GGG 0.584066 5_2:+5461155 None:intergenic
GCAGGACCAATTATGAATGT+CGG 0.584913 5_2:-5458985 Msa0751890:CDS
ATGTTCCCGTGGAACGTTGG+TGG 0.586357 5_2:+5459844 None:intergenic
AACGTTCCACGGGAACATCA+TGG 0.588608 5_2:-5459839 Msa0751890:intron
TGATCAAGAACACCGTGGAA+AGG 0.589460 5_2:-5458864 Msa0751890:CDS
GAGTAGGAACATGTGGGGAG+GGG 0.590439 5_2:+5460320 None:intergenic
TTGATTCTATTCCACATGCA+AGG 0.590966 5_2:-5458921 Msa0751890:CDS
GAACAGGCGCACTTCACTCA+AGG 0.594716 5_2:-5461832 Msa0751890:intron
CAATTTGTTGCTGTGTGTGG+CGG 0.596318 5_2:+5462083 None:intergenic
GTATATTGAATCTTGCGGAA+AGG 0.597531 5_2:-5459714 Msa0751890:CDS
GTCCTTTCAACTGGAGTGGG+AGG 0.597763 5_2:-5460485 Msa0751890:CDS
CCACATGCAAGGCTAGCTCT+GGG 0.598313 5_2:-5458910 Msa0751890:CDS
AATACATGAAGTATTTCCCA+AGG 0.599100 5_2:-5460876 Msa0751890:CDS
ATCTCAGTGACATAATTGGT+GGG 0.600678 5_2:+5460913 None:intergenic
AAAGGTACCTGGAAACGGAC+CGG 0.603908 5_2:-5459638 Msa0751890:CDS
CACTGAGATTCTCAATGGAG+AGG 0.605470 5_2:-5460899 Msa0751890:CDS
GATGAAGTTAATAGATACAA+GGG 0.607202 5_2:-5461515 Msa0751890:CDS
CAATTCATGAACTATACCGC+CGG 0.609707 5_2:+5459353 None:intergenic
TAATTGGTGGGAAGCCAAAG+AGG 0.613117 5_2:+5460925 None:intergenic
GGAGCACACCACCGCATGGT+AGG 0.614498 5_2:-5461072 Msa0751890:CDS
ATGCACGAAATCCTGATTGG+CGG 0.614815 5_2:-5459075 Msa0751890:CDS
TGGTGCATTTAACAGATGCA+AGG 0.616895 5_2:+5460231 None:intergenic
ACGAGTAGGAACATGTGGGG+AGG 0.617756 5_2:+5460318 None:intergenic
ACAGTGAGATTGACTCCGGA+GGG 0.618021 5_2:-5459745 Msa0751890:intron
CTACTACTACTAGTAGCAGA+TGG 0.619998 5_2:+5460211 None:intergenic
TGTAGATATCCTCATGGATG+TGG 0.622507 5_2:-5460773 Msa0751890:intron
ATGTACAGTGAGATTGACTC+CGG 0.623201 5_2:-5459749 Msa0751890:intron
GCAAGTCCAGAATTAACTAG+AGG 0.625489 5_2:+5459932 None:intergenic
TCCAGATGGAATATGGGTAG+TGG 0.628113 5_2:-5460263 Msa0751890:CDS
ACACCACCGCATGGTAGGAG+AGG 0.632377 5_2:-5461067 Msa0751890:CDS
CCCAGAGCTAGCCTTGCATG+TGG 0.637254 5_2:+5458910 None:intergenic
AAGCTAAGATGACAAGCTTG+GGG 0.643388 5_2:-5458489 Msa0751890:three_prime_UTR
TGGGATATTCTCTCCGCCGG+CGG 0.644828 5_2:-5459369 Msa0751890:CDS
ATTGGTGGGAAGCCAAAGAG+GGG 0.648389 5_2:+5460927 None:intergenic
TGGATGATGTTATATTGGCA+CGG 0.648641 5_2:+5461154 None:intergenic
TTATGAATGTCGGATCTGGA+GGG 0.649910 5_2:-5458975 Msa0751890:CDS
AAGCCTCTCCTACCATGCGG+TGG 0.649944 5_2:+5461064 None:intergenic
CAATGGAGCACACCACCGCA+TGG 0.649965 5_2:-5461076 Msa0751890:CDS
AAGAGAAAGATTGATCATGG+TGG 0.650524 5_2:+5463401 None:intergenic
AGAATTGCACTGATGTAACT+GGG 0.652163 5_2:-5459134 Msa0751890:CDS
CATATACCATGATGTTCCCG+TGG 0.653306 5_2:+5459833 None:intergenic
ATGATGTTCCCGTGGAACGT+TGG 0.653734 5_2:+5459841 None:intergenic
TACAGTGAGATTGACTCCGG+AGG 0.655167 5_2:-5459746 Msa0751890:intron
CTACGATGGAGCCTTGCAAG+TGG 0.661414 5_2:-5460459 Msa0751890:intron
TGTCTCAATCAAACAACCAG+AGG 0.663405 5_2:+5460156 None:intergenic
TTTGACGAGTAGGAACATGT+GGG 0.667790 5_2:+5460314 None:intergenic
GTCTCAATCAAACAACCAGA+GGG 0.671321 5_2:+5460157 None:intergenic
AAATTCAGAGCAGAGTGATG+TGG 0.672413 5_2:-5459169 Msa0751890:CDS
GGAGTGGGAGGTAACTACGA+TGG 0.675779 5_2:-5460473 Msa0751890:CDS
TAACAAAGAAACAAGCAACA+TGG 0.679618 5_2:-5462251 Msa0751890:exon
TGAGGGTTCGAAAGAATCCG+TGG 0.680929 5_2:-5460821 Msa0751890:CDS
ACTTCCACATACGTTGCATG+TGG 0.681040 5_2:+5461481 None:intergenic
TGGAAGTTCCACTACCGCTG+GGG 0.684408 5_2:-5461465 Msa0751890:CDS
TGTAGAAGTTGATGATCAGG+TGG 0.686691 5_2:-5459972 Msa0751890:CDS
AGAAGCAAACCAAATGAACG+TGG 0.686882 5_2:-5462164 Msa0751890:CDS
TTGACGAGTAGGAACATGTG+GGG 0.689635 5_2:+5460315 None:intergenic
TTGGTGGGAAGCCAAAGAGG+GGG 0.695051 5_2:+5460928 None:intergenic
ATACATGAAGTATTTCCCAA+GGG 0.695847 5_2:-5460875 Msa0751890:CDS
AGCATTAATCATGACCACCA+CGG 0.701180 5_2:+5460804 None:intergenic
GGTACCTGGAAACGGACCGG+AGG 0.704720 5_2:-5459635 Msa0751890:CDS
AGCAAACCAAATGAACGTGG+AGG 0.709887 5_2:-5462161 Msa0751890:CDS
AAGACCCTTAATCTGTACGG+AGG 0.717527 5_2:+5461026 None:intergenic
TTCATGAACTATACCGCCGG+CGG 0.721861 5_2:+5459356 None:intergenic
CACTTTGATCAAGAACACCG+TGG 0.722262 5_2:-5458869 Msa0751890:CDS
GTCATGTGACATTTCCCCAG+CGG 0.729104 5_2:+5461451 None:intergenic
TGAAGTTAATAGATACAAGG+GGG 0.735707 5_2:-5461513 Msa0751890:CDS
CTTGATCAAAGTGTTAACAG+TGG 0.736197 5_2:+5458879 None:intergenic
AATGACTCACCACATCCATG+AGG 0.740230 5_2:+5460764 None:intergenic
GGGTTCGAAAGAATCCGTGG+TGG 0.741743 5_2:-5460818 Msa0751890:CDS
TGAAAGCCTCTCCTACCATG+CGG 0.757709 5_2:+5461061 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATTTAATCTATCA+TGG + chr5_2:5459266-5459285 None:intergenic 10.0%
!! TCAGATAAAATATATAAAAA+TGG + chr5_2:5459759-5459778 None:intergenic 10.0%
!!! AATAATATTCTAAAAATACT+TGG + chr5_2:5461149-5461168 None:intergenic 10.0%
!!! TTTATTTTAAAAAAGAACAT+TGG - chr5_2:5461171-5461190 Msa0751890:CDS 10.0%
!! AATTTAATAATATAAATGGA+GGG + chr5_2:5461228-5461247 None:intergenic 10.0%
!! AAATTTAATAATATAAATGG+AGG + chr5_2:5461229-5461248 None:intergenic 10.0%
!! TTAATAATAGTTTATAATGT+TGG - chr5_2:5461718-5461737 Msa0751890:intron 10.0%
!! AAGTTATGTAAAATTAAAAT+TGG - chr5_2:5462525-5462544 Msa0751890:intron 10.0%
!!! TTTGAAATATCAATTAATGT+AGG + chr5_2:5459423-5459442 None:intergenic 15.0%
!! AAACATTAATGCAAATAATA+AGG + chr5_2:5461086-5461105 None:intergenic 15.0%
!!! ATTAATATTATTTTAGGTGA+AGG + chr5_2:5461703-5461722 None:intergenic 15.0%
!! ATATTTAATTGAATTTACAG+TGG - chr5_2:5462407-5462426 Msa0751890:intron 15.0%
!! TATTTAATTGAATTTACAGT+GGG - chr5_2:5462408-5462427 Msa0751890:intron 15.0%
!! CTTCATTACTTAAAAAAAAA+AGG - chr5_2:5463071-5463090 Msa0751890:intron 15.0%
!!! AAGTATTTTGTTTTTTCAAT+AGG + chr5_2:5463421-5463440 None:intergenic 15.0%
!! TCAATCTTTCTCTTATAATA+AGG - chr5_2:5458404-5458423 Msa0751890:three_prime_UTR 20.0%
!! AATGACATATTCATACAAAA+GGG + chr5_2:5458432-5458451 None:intergenic 20.0%
!! AAATGACATATTCATACAAA+AGG + chr5_2:5458433-5458452 None:intergenic 20.0%
!!! GTCACAATTTTTTTTGATAT+TGG - chr5_2:5458576-5458595 Msa0751890:intron 20.0%
!! TGAAATAGTAAGAAAAAAAG+CGG - chr5_2:5459055-5459074 Msa0751890:CDS 20.0%
!! ATAAAAAAAGCTACCTAAAA+AGG + chr5_2:5459192-5459211 None:intergenic 20.0%
!!! TGGTATTAATTTTTTGAACT+TGG - chr5_2:5459830-5459849 Msa0751890:intron 20.0%
!!! TATGTAAGAGTTGATAATAA+TGG + chr5_2:5460105-5460124 None:intergenic 20.0%
!!! AAAAGAAGCATTTAATTAAG+AGG + chr5_2:5460161-5460180 None:intergenic 20.0%
!!! CTTAATTAAATGCTTCTTTT+CGG - chr5_2:5460161-5460180 Msa0751890:CDS 20.0%
!!! AAATTTGTTTTCAGAATCAA+TGG - chr5_2:5461243-5461262 Msa0751890:intron 20.0%
!!! AATGTTGGATTATTTTAATG+TGG - chr5_2:5461733-5461752 Msa0751890:intron 20.0%
!! CTAATTTCATTATCTTCATA+AGG - chr5_2:5462984-5463003 Msa0751890:intron 20.0%
!!! AAATAATCTATTTTGAACTC+AGG + chr5_2:5463165-5463184 None:intergenic 20.0%
!! TTCAATGAATAAAACAAACA+TGG + chr5_2:5463250-5463269 None:intergenic 20.0%
! TATAAGAGAAAGATTGATCA+TGG + chr5_2:5458401-5458420 None:intergenic 25.0%
!!! TCACTTCTTTCATTCTTTTT+TGG - chr5_2:5458745-5458764 Msa0751890:intron 25.0%
!!! CACTTCTTTCATTCTTTTTT+GGG - chr5_2:5458746-5458765 Msa0751890:intron 25.0%
! ATGAGTGTATCATTATGTTT+AGG - chr5_2:5458789-5458808 Msa0751890:intron 25.0%
! ATTGTAGAATAATGTTCTCT+CGG + chr5_2:5459150-5459169 None:intergenic 25.0%
!!! ACTTGCTCTATATTTTTGTT+TGG - chr5_2:5459810-5459829 Msa0751890:intron 25.0%
! GACAAAAAAATACATGTAGT+TGG + chr5_2:5459999-5460018 None:intergenic 25.0%
! TTATATAGGTTCAAACTGAT+AGG - chr5_2:5460216-5460235 Msa0751890:CDS 25.0%
! TATATAGGTTCAAACTGATA+GGG - chr5_2:5460217-5460236 Msa0751890:CDS 25.0%
! AGATGAAGTTAATAGATACA+AGG - chr5_2:5460280-5460299 Msa0751890:CDS 25.0%
! GATGAAGTTAATAGATACAA+GGG - chr5_2:5460281-5460300 Msa0751890:CDS 25.0%
! ATGAAGTTAATAGATACAAG+GGG - chr5_2:5460282-5460301 Msa0751890:CDS 25.0%
! ATTGTTGGATGATGTTATAT+TGG + chr5_2:5460650-5460669 None:intergenic 25.0%
! GCATTAATGTTTCAAAAACT+TGG - chr5_2:5461094-5461113 Msa0751890:CDS 25.0%
! TATAAACCTCTAGTTAATTC+TGG - chr5_2:5461858-5461877 Msa0751890:CDS 25.0%
!!! TGATCGTCTTGTTTTTAAAA+CGG - chr5_2:5461929-5461948 Msa0751890:CDS 25.0%
!! GAAAAGTATATTGAATCTTG+CGG - chr5_2:5462077-5462096 Msa0751890:CDS 25.0%
! TAATGAAATTAGATGCCATT+AGG + chr5_2:5462976-5462995 None:intergenic 25.0%
! ATGGTAATCATTAAGGAATT+TGG + chr5_2:5463231-5463250 None:intergenic 25.0%
! AACAAACATGGTAATCATTA+AGG + chr5_2:5463238-5463257 None:intergenic 25.0%
!!! ATTTTGAAAGAACTTAGGTT+CGG - chr5_2:5463382-5463401 Msa0751890:intron 25.0%
TCATTTCCTGAAATAGTGTT+AGG - chr5_2:5458447-5458466 Msa0751890:three_prime_UTR 30.0%
AAGACAAATACAAAGTAGAG+TGG + chr5_2:5458717-5458736 None:intergenic 30.0%
ACATAATGATACACTCATTC+AGG + chr5_2:5458787-5458806 None:intergenic 30.0%
AATGATACATAGACATCCAT+AGG + chr5_2:5458968-5458987 None:intergenic 30.0%
TTCTTACTATTTCACAGCTT+TGG + chr5_2:5459049-5459068 None:intergenic 30.0%
AGATATAGTTATCACCTGTT+TGG + chr5_2:5459104-5459123 None:intergenic 30.0%
CACTCAATTGGAAAAGTTAA+TGG + chr5_2:5459371-5459390 None:intergenic 30.0%
AGAAGAGGTAAAATATCAAG+TGG + chr5_2:5459457-5459476 None:intergenic 30.0%
!! ATGTTTTTGAATTCCTGTTC+TGG - chr5_2:5459509-5459528 Msa0751890:CDS 30.0%
TAACAAAGAAACAAGCAACA+TGG - chr5_2:5459545-5459564 Msa0751890:CDS 30.0%
ACAGCAACAAATTGATGAAA+TGG - chr5_2:5459722-5459741 Msa0751890:CDS 30.0%
AATTGATGAAATGGATACGT+AGG - chr5_2:5459731-5459750 Msa0751890:CDS 30.0%
!!! ATGTATTTTTTTGTCGTTGC+AGG - chr5_2:5460004-5460023 Msa0751890:intron 30.0%
! AATTAAATGCTTCTTTTCGG+CGG - chr5_2:5460164-5460183 Msa0751890:CDS 30.0%
TGAAGTTAATAGATACAAGG+GGG - chr5_2:5460283-5460302 Msa0751890:CDS 30.0%
GAAAATCATAACAAACGATG+AGG + chr5_2:5460416-5460435 None:intergenic 30.0%
ATTAAGACCCTTAATCTGTA+CGG + chr5_2:5460776-5460795 None:intergenic 30.0%
! AATACATGAAGTATTTCCCA+AGG - chr5_2:5460920-5460939 Msa0751890:CDS 30.0%
! ATACATGAAGTATTTCCCAA+GGG - chr5_2:5460921-5460940 Msa0751890:CDS 30.0%
! TAATAAGGCTTAGAAAGTGT+TGG + chr5_2:5461071-5461090 None:intergenic 30.0%
! CAATGGTCAAATATGTTTTG+CGG - chr5_2:5461260-5461279 Msa0751890:intron 30.0%
GTTTACAGTATCTCACAAAA+TGG + chr5_2:5461509-5461528 None:intergenic 30.0%
!!! GTTGTCTTGTTTTTTGTAAC+AGG - chr5_2:5461785-5461804 Msa0751890:intron 30.0%
!!! GTTTTTTGTAACAGGTTACA+TGG - chr5_2:5461793-5461812 Msa0751890:intron 30.0%
!! AAATGTAGAAGTTGATGATC+AGG - chr5_2:5461821-5461840 Msa0751890:intron 30.0%
! AATATACTTTTCTTTCCCTC+CGG + chr5_2:5462069-5462088 None:intergenic 30.0%
ACTTACAGTGATACGAAATA+AGG + chr5_2:5462509-5462528 None:intergenic 30.0%
ACATATTCTAACGTTCTCTT+TGG - chr5_2:5462578-5462597 Msa0751890:intron 30.0%
CATATTCTAACGTTCTCTTT+GGG - chr5_2:5462579-5462598 Msa0751890:intron 30.0%
ACCATCTAATCTTAATCAGA+CGG + chr5_2:5463142-5463161 None:intergenic 30.0%
! GAAAATAGCATGCTTTTATG+TGG - chr5_2:5463267-5463286 Msa0751890:intron 30.0%
CATTGAAAAAAGATACTCCA+AGG + chr5_2:5463358-5463377 None:intergenic 30.0%
!!! GGAGTATCTTTTTTCAATGT+TGG - chr5_2:5463359-5463378 Msa0751890:intron 30.0%
!! GTTGGATTTTGAAAGAACTT+AGG - chr5_2:5463377-5463396 Msa0751890:intron 30.0%
!! TTTTGAAAGAACTTAGGTTC+GGG - chr5_2:5463383-5463402 Msa0751890:intron 30.0%
AAGAGAAAGATTGATCATGG+TGG + chr5_2:5458398-5458417 None:intergenic 35.0%
TGAGATCCTAACACTATTTC+AGG + chr5_2:5458456-5458475 None:intergenic 35.0%
ACAAATACAAAGTAGAGTGG+AGG + chr5_2:5458714-5458733 None:intergenic 35.0%
! ATACACTCATTCAGGTTTCA+AGG + chr5_2:5458779-5458798 None:intergenic 35.0%
! TAAGGGTGTATGGGAATAAA+GGG + chr5_2:5458832-5458851 None:intergenic 35.0%
! ATAAGGGTGTATGGGAATAA+AGG + chr5_2:5458833-5458852 None:intergenic 35.0%
CTAATACATGGGGTGTATAA+GGG + chr5_2:5458849-5458868 None:intergenic 35.0%
TTCTCTCTTCCTAATACATG+GGG + chr5_2:5458859-5458878 None:intergenic 35.0%
CTTCTCTCTTCCTAATACAT+GGG + chr5_2:5458860-5458879 None:intergenic 35.0%
TCTTCTCTCTTCCTAATACA+TGG + chr5_2:5458861-5458880 None:intergenic 35.0%
TGTATTAGGAAGAGAGAAGA+TGG - chr5_2:5458861-5458880 Msa0751890:CDS 35.0%
GTATTAGGAAGAGAGAAGAT+GGG - chr5_2:5458862-5458881 Msa0751890:CDS 35.0%
! ACCACATGTCAGATTTTTGT+GGG - chr5_2:5458920-5458939 Msa0751890:CDS 35.0%
CAGAAGAAAATGTGTAGAAG+AGG + chr5_2:5459472-5459491 None:intergenic 35.0%
!! TTCTTGCTGTGATTTTGATG+TGG + chr5_2:5459579-5459598 None:intergenic 35.0%
GCAAGAACATGTATCAGAAT+AGG - chr5_2:5459592-5459611 Msa0751890:CDS 35.0%
!! ACCAAAACTTGATTTGCGTT+GGG + chr5_2:5459940-5459959 None:intergenic 35.0%
!! AACCAAAACTTGATTTGCGT+TGG + chr5_2:5459941-5459960 None:intergenic 35.0%
!!! TCAAGTTTTGGTTTCAGAAC+AGG - chr5_2:5459948-5459967 Msa0751890:CDS 35.0%
TGGATGATGTTATATTGGCA+CGG + chr5_2:5460645-5460664 None:intergenic 35.0%
! AACAACATGAGTGCTATTGT+TGG + chr5_2:5460665-5460684 None:intergenic 35.0%
ATCTCAGTGACATAATTGGT+GGG + chr5_2:5460886-5460905 None:intergenic 35.0%
AATCTCAGTGACATAATTGG+TGG + chr5_2:5460887-5460906 None:intergenic 35.0%
GAGAATCTCAGTGACATAAT+TGG + chr5_2:5460890-5460909 None:intergenic 35.0%
TATGTCACTGAGATTCTCAA+TGG - chr5_2:5460892-5460911 Msa0751890:CDS 35.0%
! AGCTTTAATCCCAATGTGTT+GGG + chr5_2:5460955-5460974 None:intergenic 35.0%
! AAGCTTTAATCCCAATGTGT+TGG + chr5_2:5460956-5460975 None:intergenic 35.0%
ACATTGGGATTAAAGCTTGA+GGG - chr5_2:5460958-5460977 Msa0751890:CDS 35.0%
ATGAGGATATCTACAAGATC+AGG + chr5_2:5461018-5461037 None:intergenic 35.0%
TGATCTTGTAGATATCCTCA+TGG - chr5_2:5461017-5461036 Msa0751890:CDS 35.0%
ATTAGTACTTACCACTTGCA+AGG + chr5_2:5461351-5461370 None:intergenic 35.0%
!!! ACAAAATGGTTTTGACGAGT+AGG + chr5_2:5461495-5461514 None:intergenic 35.0%
AGACCTTAGTAAGACCATTT+GGG + chr5_2:5461668-5461687 None:intergenic 35.0%
AAGACCTTAGTAAGACCATT+TGG + chr5_2:5461669-5461688 None:intergenic 35.0%
!! GTTAATTCTGGACTTGCTTT+TGG - chr5_2:5461870-5461889 Msa0751890:CDS 35.0%
GTATATTGAATCTTGCGGAA+AGG - chr5_2:5462082-5462101 Msa0751890:CDS 35.0%
!! GCTAGCTTTAGTACAAGTAT+TGG - chr5_2:5462111-5462130 Msa0751890:CDS 35.0%
!! TAAGTGCTGCTACTTCTTTT+TGG - chr5_2:5462250-5462269 Msa0751890:exon 35.0%
! GAATTGGCTCACATTTCAAA+TGG - chr5_2:5462460-5462479 Msa0751890:intron 35.0%
ATTTCAAATGGTCGTGATTC+TGG - chr5_2:5462472-5462491 Msa0751890:intron 35.0%
! AGAATTGCACTGATGTAACT+GGG - chr5_2:5462662-5462681 Msa0751890:intron 35.0%
ATCTGGAAAAATAGCGAATC+CGG + chr5_2:5462776-5462795 None:intergenic 35.0%
!!! GATTCGCTATTTTTCCAGAT+GGG - chr5_2:5462776-5462795 Msa0751890:intron 35.0%
TTGATTCTATTCCACATGCA+AGG - chr5_2:5462875-5462894 Msa0751890:intron 35.0%
! CTTGATCAAAGTGTTAACAG+TGG + chr5_2:5462920-5462939 None:intergenic 35.0%
!! TGCAGTTTTAATCCTTTCCA+CGG + chr5_2:5462947-5462966 None:intergenic 35.0%
GTTAGCTACGACTAAAACTA+AGG + chr5_2:5463052-5463071 None:intergenic 35.0%
AATCTTAATCAGACGGTCAA+AGG + chr5_2:5463135-5463154 None:intergenic 35.0%
ACCGTCTGATTAAGATTAGA+TGG - chr5_2:5463138-5463157 Msa0751890:intron 35.0%
AAAGCTAAGATGACAAGCTT+GGG - chr5_2:5463306-5463325 Msa0751890:intron 35.0%
TGCATGTATTAGTGTCGTGT+CGG + chr5_2:5458535-5458554 None:intergenic 40.0%
! TTGGTGTGTTATTGTCCATG+TGG - chr5_2:5458595-5458614 Msa0751890:intron 40.0%
CACAAAGACAATACACCACA+TGG + chr5_2:5458613-5458632 None:intergenic 40.0%
TTGTCTTTGTGCTTCACAAC+AGG - chr5_2:5458622-5458641 Msa0751890:intron 40.0%
CCTAATACATGGGGTGTATA+AGG + chr5_2:5458850-5458869 None:intergenic 40.0%
CCTTATACACCCCATGTATT+AGG - chr5_2:5458847-5458866 Msa0751890:CDS 40.0%
AAATCTGACATGTGGTCATG+TGG + chr5_2:5458916-5458935 None:intergenic 40.0%
! GACCACATGTCAGATTTTTG+TGG - chr5_2:5458919-5458938 Msa0751890:CDS 40.0%
! CCACATGTCAGATTTTTGTG+GGG - chr5_2:5458921-5458940 Msa0751890:CDS 40.0%
! CACATGTCAGATTTTTGTGG+GGG - chr5_2:5458922-5458941 Msa0751890:CDS 40.0%
!!! ATTTTTGTGGGGGTGTCAAA+GGG - chr5_2:5458932-5458951 Msa0751890:CDS 40.0%
GATACATAGACATCCATAGG+TGG + chr5_2:5458965-5458984 None:intergenic 40.0%
! ACTTGCAGCTGAACCTTTTT+AGG - chr5_2:5459176-5459195 Msa0751890:CDS 40.0%
GGAAAAGTTAATGGCTATGC+AGG + chr5_2:5459362-5459381 None:intergenic 40.0%
CACAGTTACAGTCACTCAAT+TGG + chr5_2:5459383-5459402 None:intergenic 40.0%
! TTTTGAATTCCTGTTCTGGC+AGG - chr5_2:5459513-5459532 Msa0751890:CDS 40.0%
AGAAGCAAACCAAATGAACG+TGG - chr5_2:5459632-5459651 Msa0751890:CDS 40.0%
!! CATCAATTTGTTGCTGTGTG+TGG + chr5_2:5459719-5459738 None:intergenic 40.0%
CTCTTCTCTGAGCATCATTA+GGG + chr5_2:5459892-5459911 None:intergenic 40.0%
TCTCTTCTCTGAGCATCATT+AGG + chr5_2:5459893-5459912 None:intergenic 40.0%
! ACCCAACGCAAATCAAGTTT+TGG - chr5_2:5459936-5459955 Msa0751890:CDS 40.0%
GAATGCAATATGCATGGCAA+CGG + chr5_2:5460038-5460057 None:intergenic 40.0%
CACAACGAATGCAATATGCA+TGG + chr5_2:5460044-5460063 None:intergenic 40.0%
CATGCATATTGCATTCGTTG+TGG - chr5_2:5460042-5460061 Msa0751890:intron 40.0%
GATTGGAGAATGCTCTCTTA+AGG - chr5_2:5460381-5460400 Msa0751890:intron 40.0%
GAATGCTCTCTTAAGGAAAG+AGG - chr5_2:5460388-5460407 Msa0751890:intron 40.0%
AAAAAAACCGCCAGCTTGAA+AGG - chr5_2:5460584-5460603 Msa0751890:intron 40.0%
GGATGATGTTATATTGGCAC+GGG + chr5_2:5460644-5460663 None:intergenic 40.0%
AGGGTCTTAATGAGAAGCAA+AGG - chr5_2:5460785-5460804 Msa0751890:CDS 40.0%
GGGTCTTAATGAGAAGCAAA+GGG - chr5_2:5460786-5460805 Msa0751890:CDS 40.0%
AAGTATTTCCCAAGGGCTAA+TGG - chr5_2:5460928-5460947 Msa0751890:CDS 40.0%
CACATTGGGATTAAAGCTTG+AGG - chr5_2:5460957-5460976 Msa0751890:CDS 40.0%
AGCATTAATCATGACCACCA+CGG + chr5_2:5460995-5461014 None:intergenic 40.0%
TGTAGATATCCTCATGGATG+TGG - chr5_2:5461023-5461042 Msa0751890:CDS 40.0%
AAAACTTGGACCAAACCATC+CGG - chr5_2:5461108-5461127 Msa0751890:CDS 40.0%
TTGGTTCAACCTGATTGAAC+CGG + chr5_2:5461130-5461149 None:intergenic 40.0%
ACACTTGAAGTCCTTTCAAC+TGG - chr5_2:5461302-5461321 Msa0751890:intron 40.0%
TTTGACGAGTAGGAACATGT+GGG + chr5_2:5461485-5461504 None:intergenic 40.0%
! TTTTGACGAGTAGGAACATG+TGG + chr5_2:5461486-5461505 None:intergenic 40.0%
TACTGTAAACTGCATCCAGA+TGG - chr5_2:5461519-5461538 Msa0751890:CDS 40.0%
AACTGCATCCAGATGGAATA+TGG - chr5_2:5461526-5461545 Msa0751890:CDS 40.0%
ACTGCATCCAGATGGAATAT+GGG - chr5_2:5461527-5461546 Msa0751890:CDS 40.0%
TGGTGCATTTAACAGATGCA+AGG + chr5_2:5461568-5461587 None:intergenic 40.0%
CTACTACTACTAGTAGCAGA+TGG + chr5_2:5461588-5461607 None:intergenic 40.0%
GTCTCAATCAAACAACCAGA+GGG + chr5_2:5461642-5461661 None:intergenic 40.0%
TGTCTCAATCAAACAACCAG+AGG + chr5_2:5461643-5461662 None:intergenic 40.0%
TTGATTGAGACACTCCCAAA+TGG - chr5_2:5461651-5461670 Msa0751890:intron 40.0%
! ACTCCCAAATGGTCTTACTA+AGG - chr5_2:5461662-5461681 Msa0751890:intron 40.0%
!! TGTAGAAGTTGATGATCAGG+TGG - chr5_2:5461824-5461843 Msa0751890:intron 40.0%
GCAAGTCCAGAATTAACTAG+AGG + chr5_2:5461867-5461886 None:intergenic 40.0%
! ATGTACAGTGAGATTGACTC+CGG - chr5_2:5462047-5462066 Msa0751890:intron 40.0%
ATTGAATCTTGCGGAAAGGT+TGG - chr5_2:5462086-5462105 Msa0751890:CDS 40.0%
GTTCTTCTACAACACATGCT+TGG - chr5_2:5462133-5462152 Msa0751890:CDS 40.0%
TACAACACATGCTTGGACAA+AGG - chr5_2:5462140-5462159 Msa0751890:CDS 40.0%
AGAAAATCAAACACCCTCCT+TGG + chr5_2:5462288-5462307 None:intergenic 40.0%
CAATTCATGAACTATACCGC+CGG + chr5_2:5462446-5462465 None:intergenic 40.0%
AAATTCAGAGCAGAGTGATG+TGG - chr5_2:5462627-5462646 Msa0751890:intron 40.0%
! GAGAATTGCACTGATGTAAC+TGG - chr5_2:5462661-5462680 Msa0751890:intron 40.0%
TGCATTGTAGGTATTTGCAC+AGG + chr5_2:5462706-5462725 None:intergenic 40.0%
ATCAGGATTTCGTGCATTGT+AGG + chr5_2:5462718-5462737 None:intergenic 40.0%
ACAATGCACGAAATCCTGAT+TGG - chr5_2:5462718-5462737 Msa0751890:intron 40.0%
!!! GGATTCGCTATTTTTCCAGA+TGG - chr5_2:5462775-5462794 Msa0751890:intron 40.0%
GCAGGACCAATTATGAATGT+CGG - chr5_2:5462811-5462830 Msa0751890:intron 40.0%
CCAGATCCGACATTCATAAT+TGG + chr5_2:5462820-5462839 None:intergenic 40.0%
CCAATTATGAATGTCGGATC+TGG - chr5_2:5462817-5462836 Msa0751890:intron 40.0%
ATTATGAATGTCGGATCTGG+AGG - chr5_2:5462820-5462839 Msa0751890:intron 40.0%
TTATGAATGTCGGATCTGGA+GGG - chr5_2:5462821-5462840 Msa0751890:intron 40.0%
AAAACTGCAGTGATGCCTAA+TGG - chr5_2:5462958-5462977 Msa0751890:intron 40.0%
! TGCTTTTATGTGGTGCATGT+AGG - chr5_2:5463277-5463296 Msa0751890:intron 40.0%
CAAAGCTAAGATGACAAGCT+TGG - chr5_2:5463305-5463324 Msa0751890:intron 40.0%
AAGCTAAGATGACAAGCTTG+GGG - chr5_2:5463307-5463326 Msa0751890:intron 40.0%
! TGGGGTGTATAAGGGTGTAT+GGG + chr5_2:5458841-5458860 None:intergenic 45.0%
! ATGGGGTGTATAAGGGTGTA+TGG + chr5_2:5458842-5458861 None:intergenic 45.0%
CCCCACAAAAATCTGACATG+TGG + chr5_2:5458924-5458943 None:intergenic 45.0%
!!! GATTTTTGTGGGGGTGTCAA+AGG - chr5_2:5458931-5458950 Msa0751890:CDS 45.0%
! AAAGGGTGTATTGCCACCTA+TGG - chr5_2:5458949-5458968 Msa0751890:CDS 45.0%
TGCACTAGTCATCTCCAAAC+AGG - chr5_2:5459087-5459106 Msa0751890:CDS 45.0%
CTCTAATAACCTGCCAGAAC+AGG + chr5_2:5459525-5459544 None:intergenic 45.0%
AGCAAACCAAATGAACGTGG+AGG - chr5_2:5459635-5459654 Msa0751890:CDS 45.0%
GGTTGTTGGTCATCACTTGA+AGG + chr5_2:5459663-5459682 None:intergenic 45.0%
!!! CTTTTTCTGGGACGTTGGTT+GGG + chr5_2:5459684-5459703 None:intergenic 45.0%
!! CAATTTGTTGCTGTGTGTGG+CGG + chr5_2:5459716-5459735 None:intergenic 45.0%
CTCTGAGCATCATTAGGGTT+AGG + chr5_2:5459887-5459906 None:intergenic 45.0%
GTTACCACATGCAACGTATG+TGG - chr5_2:5460311-5460330 Msa0751890:CDS 45.0%
ACTTCCACATACGTTGCATG+TGG + chr5_2:5460318-5460337 None:intergenic 45.0%
TGACGATCAGCAGCTAAGAT+TGG - chr5_2:5460364-5460383 Msa0751890:intron 45.0%
CCATATACCTTTCAAGCTGG+CGG + chr5_2:5460594-5460613 None:intergenic 45.0%
! CGCCAGCTTGAAAGGTATAT+GGG - chr5_2:5460592-5460611 Msa0751890:intron 45.0%
CTCCCATATACCTTTCAAGC+TGG + chr5_2:5460597-5460616 None:intergenic 45.0%
!!! GTTTCACGCTCTGCTGATTT+TGG - chr5_2:5460682-5460701 Msa0751890:intron 45.0%
!!! TCTGCTGATTTTGGAGTTGC+TGG - chr5_2:5460691-5460710 Msa0751890:intron 45.0%
AAGACCCTTAATCTGTACGG+AGG + chr5_2:5460773-5460792 None:intergenic 45.0%
!! GTTGTAGAGCTTGCTGTTGT+TGG - chr5_2:5460808-5460827 Msa0751890:CDS 45.0%
!! AGAGCTTGCTGTTGTTGGAA+TGG - chr5_2:5460813-5460832 Msa0751890:CDS 45.0%
AATGGCTGAACTGACCAAAC+TGG - chr5_2:5460831-5460850 Msa0751890:CDS 45.0%
ACCAAACTGGCTAGGACATA+TGG - chr5_2:5460844-5460863 Msa0751890:CDS 45.0%
TCCATATGTCCTAGCCAGTT+TGG + chr5_2:5460848-5460867 None:intergenic 45.0%
AATTGGTGGGAAGCCAAAGA+GGG + chr5_2:5460873-5460892 None:intergenic 45.0%
TAATTGGTGGGAAGCCAAAG+AGG + chr5_2:5460874-5460893 None:intergenic 45.0%
CACTGAGATTCTCAATGGAG+AGG - chr5_2:5460897-5460916 Msa0751890:CDS 45.0%
GCTAATGGTCCCAACACATT+GGG - chr5_2:5460943-5460962 Msa0751890:CDS 45.0%
AATGACTCACCACATCCATG+AGG + chr5_2:5461035-5461054 None:intergenic 45.0%
TTCAACCTGATTGAACCGGA+TGG + chr5_2:5461126-5461145 None:intergenic 45.0%
TGAAGTCCTTTCAACTGGAG+TGG - chr5_2:5461307-5461326 Msa0751890:intron 45.0%
GAAGTCCTTTCAACTGGAGT+GGG - chr5_2:5461308-5461327 Msa0751890:intron 45.0%
TTGACGAGTAGGAACATGTG+GGG + chr5_2:5461484-5461503 None:intergenic 45.0%
TCCAGATGGAATATGGGTAG+TGG - chr5_2:5461533-5461552 Msa0751890:CDS 45.0%
ACAACCAGAGGGTCTTCTTT+GGG + chr5_2:5461631-5461650 None:intergenic 45.0%
AACAACCAGAGGGTCTTCTT+TGG + chr5_2:5461632-5461651 None:intergenic 45.0%
!!! TTGCTTTTGGAGCTAAACGC+TGG - chr5_2:5461883-5461902 Msa0751890:CDS 45.0%
!!! TGCTTTTGGAGCTAAACGCT+GGG - chr5_2:5461884-5461903 Msa0751890:CDS 45.0%
CATATACCATGATGTTCCCG+TGG + chr5_2:5461966-5461985 None:intergenic 45.0%
!! TGGACAAAGGTACCTGGAAA+CGG - chr5_2:5462153-5462172 Msa0751890:CDS 45.0%
GTCATGACCATTACAACCTC+CGG + chr5_2:5462180-5462199 None:intergenic 45.0%
AGCACTTAGCACTACACTGA+CGG + chr5_2:5462238-5462257 None:intergenic 45.0%
AAATCAAACACCCTCCTTGG+AGG + chr5_2:5462285-5462304 None:intergenic 45.0%
CGGCGGTATAGTTCATGAAT+TGG - chr5_2:5462444-5462463 Msa0751890:intron 45.0%
ATGCACGAAATCCTGATTGG+CGG - chr5_2:5462721-5462740 Msa0751890:intron 45.0%
GGAAAAATAGCGAATCCGGA+AGG + chr5_2:5462772-5462791 None:intergenic 45.0%
!! GCATTTGTTATGCACCCATC+TGG + chr5_2:5462793-5462812 None:intergenic 45.0%
GATGGGTGCATAACAAATGC+AGG - chr5_2:5462793-5462812 Msa0751890:intron 45.0%
CACTTTGATCAAGAACACCG+TGG - chr5_2:5462927-5462946 Msa0751890:intron 45.0%
TGATCAAGAACACCGTGGAA+AGG - chr5_2:5462932-5462951 Msa0751890:intron 45.0%
ACAAGTCAATGAACGCACCT+TGG - chr5_2:5463338-5463357 Msa0751890:intron 45.0%
!!! TAACTAATTATATTTTATAT+AGG - chr5_2:5460202-5460221 Msa0751890:CDS 5.0%
!!! TTTTTTTTTTTTTACATAAA+AGG + chr5_2:5460558-5460577 None:intergenic 5.0%
!! AACAAATTTAATAATATAAA+TGG + chr5_2:5461232-5461251 None:intergenic 5.0%
!!! ACTATTATTAATATTATTTT+AGG + chr5_2:5461709-5461728 None:intergenic 5.0%
AAGGAGCCTCCACGTTCATT+TGG + chr5_2:5459644-5459663 None:intergenic 50.0%
!!! CCTTTTTCTGGGACGTTGGT+TGG + chr5_2:5459685-5459704 None:intergenic 50.0%
CCAACCAACGTCCCAGAAAA+AGG - chr5_2:5459682-5459701 Msa0751890:CDS 50.0%
!!! AGGTCCTTTTTCTGGGACGT+TGG + chr5_2:5459689-5459708 None:intergenic 50.0%
! CGGCGATAGGTCCTTTTTCT+GGG + chr5_2:5459696-5459715 None:intergenic 50.0%
AGAGAAGAGAGCTGAGCCTT+CGG - chr5_2:5459903-5459922 Msa0751890:CDS 50.0%
GATTTGCGTTGGGTCTAACC+CGG + chr5_2:5459930-5459949 None:intergenic 50.0%
GTCATGTGACATTTCCCCAG+CGG + chr5_2:5460348-5460367 None:intergenic 50.0%
! CCGCCAGCTTGAAAGGTATA+TGG - chr5_2:5460591-5460610 Msa0751890:intron 50.0%
ATATTGGCACGGGAATCTGC+AGG + chr5_2:5460634-5460653 None:intergenic 50.0%
!!! GCTGATTTTGGAGTTGCTGG+TGG - chr5_2:5460694-5460713 Msa0751890:intron 50.0%
GGAGTTGCTGGTGGTAACAA+TGG - chr5_2:5460703-5460722 Msa0751890:intron 50.0%
TGAAAGCCTCTCCTACCATG+CGG + chr5_2:5460738-5460757 None:intergenic 50.0%
GTAGGAGAGGCTTTCAGTGT+TGG - chr5_2:5460742-5460761 Msa0751890:intron 50.0%
TGGCTCCTCCGTACAGATTA+AGG - chr5_2:5460765-5460784 Msa0751890:intron 50.0%
GGCTCCTCCGTACAGATTAA+GGG - chr5_2:5460766-5460785 Msa0751890:intron 50.0%
CTGAACTGACCAAACTGGCT+AGG - chr5_2:5460836-5460855 Msa0751890:CDS 50.0%
ATTGGTGGGAAGCCAAAGAG+GGG + chr5_2:5460872-5460891 None:intergenic 50.0%
TGTTGGGACCATTAGCCCTT+GGG + chr5_2:5460939-5460958 None:intergenic 50.0%
GGCTAATGGTCCCAACACAT+TGG - chr5_2:5460942-5460961 Msa0751890:CDS 50.0%
TGAGGGTTCGAAAGAATCCG+TGG - chr5_2:5460975-5460994 Msa0751890:CDS 50.0%
CCTGATTGAACCGGATGGTT+TGG + chr5_2:5461121-5461140 None:intergenic 50.0%
CCAAACCATCCGGTTCAATC+AGG - chr5_2:5461118-5461137 Msa0751890:CDS 50.0%
TACCTCCCACTCCAGTTGAA+AGG + chr5_2:5461316-5461335 None:intergenic 50.0%
GCCACTACCCATATTCCATC+TGG + chr5_2:5461537-5461556 None:intergenic 50.0%
AGAACCCAAAGAAGACCCTC+TGG - chr5_2:5461624-5461643 Msa0751890:intron 50.0%
ATGATGTTCCCGTGGAACGT+TGG + chr5_2:5461958-5461977 None:intergenic 50.0%
AACGTTCCACGGGAACATCA+TGG - chr5_2:5461957-5461976 Msa0751890:intron 50.0%
! TACAGTGAGATTGACTCCGG+AGG - chr5_2:5462050-5462069 Msa0751890:intron 50.0%
! ACAGTGAGATTGACTCCGGA+GGG - chr5_2:5462051-5462070 Msa0751890:intron 50.0%
!! CATGCTTGGACAAAGGTACC+TGG - chr5_2:5462147-5462166 Msa0751890:CDS 50.0%
!! AAAGGTACCTGGAAACGGAC+CGG - chr5_2:5462158-5462177 Msa0751890:CDS 50.0%
AAACGGACCGGAGGTTGTAA+TGG - chr5_2:5462170-5462189 Msa0751890:CDS 50.0%
GCACTTAGCACTACACTGAC+GGG + chr5_2:5462237-5462256 None:intergenic 50.0%
! TTTGGCTTCCAGTTCCTCCA+AGG - chr5_2:5462268-5462287 Msa0751890:intron 50.0%
TTCATGAACTATACCGCCGG+CGG + chr5_2:5462443-5462462 None:intergenic 50.0%
CGTCTTACTCTGCTTCCTTC+CGG - chr5_2:5462754-5462773 Msa0751890:intron 50.0%
! TGGGACGTTGGTTGGGTTGT+TGG + chr5_2:5459677-5459696 None:intergenic 55.0%
! GCGGCGATAGGTCCTTTTTC+TGG + chr5_2:5459697-5459716 None:intergenic 55.0%
GAACAGGCGCACTTCACTCA+AGG - chr5_2:5459964-5459983 Msa0751890:CDS 55.0%
TGTGGAAGTTCCACTACCGC+TGG - chr5_2:5460329-5460348 Msa0751890:CDS 55.0%
GTGGAAGTTCCACTACCGCT+GGG - chr5_2:5460330-5460349 Msa0751890:CDS 55.0%
TGGAAGTTCCACTACCGCTG+GGG - chr5_2:5460331-5460350 Msa0751890:CDS 55.0%
TGACATTTCCCCAGCGGTAG+TGG + chr5_2:5460342-5460361 None:intergenic 55.0%
CGGGAATCTGCAGGATCTGT+CGG + chr5_2:5460625-5460644 None:intergenic 55.0%
! GGAGAGGCTTTCAGTGTTGG+TGG - chr5_2:5460745-5460764 Msa0751890:intron 55.0%
GGACATATGGACCCCCTCTT+TGG - chr5_2:5460857-5460876 Msa0751890:CDS 55.0%
TTGGTGGGAAGCCAAAGAGG+GGG + chr5_2:5460871-5460890 None:intergenic 55.0%
GTGTTGGGACCATTAGCCCT+TGG + chr5_2:5460940-5460959 None:intergenic 55.0%
GGGTTCGAAAGAATCCGTGG+TGG - chr5_2:5460978-5460997 Msa0751890:CDS 55.0%
GTCCTTTCAACTGGAGTGGG+AGG - chr5_2:5461311-5461330 Msa0751890:intron 55.0%
GGAGTGGGAGGTAACTACGA+TGG - chr5_2:5461323-5461342 Msa0751890:intron 55.0%
CTACGATGGAGCCTTGCAAG+TGG - chr5_2:5461337-5461356 Msa0751890:intron 55.0%
GAGTAGGAACATGTGGGGAG+GGG + chr5_2:5461479-5461498 None:intergenic 55.0%
CGAGTAGGAACATGTGGGGA+GGG + chr5_2:5461480-5461499 None:intergenic 55.0%
ACGAGTAGGAACATGTGGGG+AGG + chr5_2:5461481-5461500 None:intergenic 55.0%
AAACGGCCACCAACGTTCCA+CGG - chr5_2:5461946-5461965 Msa0751890:intron 55.0%
ATGTTCCCGTGGAACGTTGG+TGG + chr5_2:5461955-5461974 None:intergenic 55.0%
GCTTCCAGTTCCTCCAAGGA+GGG - chr5_2:5462272-5462291 Msa0751890:intron 55.0%
AACACCCTCCTTGGAGGAAC+TGG + chr5_2:5462279-5462298 None:intergenic 55.0%
CAGTGGGATATTCTCTCCGC+CGG - chr5_2:5462424-5462443 Msa0751890:intron 55.0%
! TCCACATGCAAGGCTAGCTC+TGG - chr5_2:5462885-5462904 Msa0751890:intron 55.0%
! CCACATGCAAGGCTAGCTCT+GGG - chr5_2:5462886-5462905 Msa0751890:intron 55.0%
TTGCTGTGTGTGGCGGCGAT+AGG + chr5_2:5459709-5459728 None:intergenic 60.0%
AGAGAGCTGAGCCTTCGGAC+CGG - chr5_2:5459908-5459927 Msa0751890:CDS 60.0%
TTGGGTCTAACCCGGTCCGA+AGG + chr5_2:5459922-5459941 None:intergenic 60.0%
CAATGGAGCACACCACCGCA+TGG - chr5_2:5460720-5460739 Msa0751890:intron 60.0%
ACACCACCGCATGGTAGGAG+AGG - chr5_2:5460729-5460748 Msa0751890:intron 60.0%
AAGCCTCTCCTACCATGCGG+TGG + chr5_2:5460735-5460754 None:intergenic 60.0%
AACGGCCACCAACGTTCCAC+GGG - chr5_2:5461947-5461966 Msa0751890:intron 60.0%
ACAACCTCCGGTCCGTTTCC+AGG + chr5_2:5462168-5462187 None:intergenic 60.0%
GGCTTCCAGTTCCTCCAAGG+AGG - chr5_2:5462271-5462290 Msa0751890:intron 60.0%
TGGGATATTCTCTCCGCCGG+CGG - chr5_2:5462427-5462446 Msa0751890:intron 60.0%
GACTTGAGTCGCCGCCAATC+AGG + chr5_2:5462735-5462754 None:intergenic 60.0%
!! CCCAGAGCTAGCCTTGCATG+TGG + chr5_2:5462889-5462908 None:intergenic 60.0%
GAGAGCTGAGCCTTCGGACC+GGG - chr5_2:5459909-5459928 Msa0751890:CDS 65.0%
GGAGCACACCACCGCATGGT+AGG - chr5_2:5460724-5460743 Msa0751890:intron 65.0%
GGTACCTGGAAACGGACCGG+AGG - chr5_2:5462161-5462180 Msa0751890:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 5458373 5463445 5458373 ID=Msa0751890;Name=Msa0751890
chr5_2 mRNA 5458373 5463445 5458373 ID=Msa0751890-mRNA-1;Parent=Msa0751890;Name=Msa0751890-mRNA-1;_AED=0.06;_eAED=0.06;_QI=82|1|0.83|1|0.81|0.66|12|165|725
chr5_2 exon 5458373 5458519 5458373 ID=Msa0751890-mRNA-1:exon:2182;Parent=Msa0751890-mRNA-1
chr5_2 exon 5458813 5459196 5458813 ID=Msa0751890-mRNA-1:exon:2181;Parent=Msa0751890-mRNA-1
chr5_2 exon 5459296 5459391 5459296 ID=Msa0751890-mRNA-1:exon:2180;Parent=Msa0751890-mRNA-1
chr5_2 exon 5459486 5459763 5459486 ID=Msa0751890-mRNA-1:exon:2179;Parent=Msa0751890-mRNA-1
chr5_2 exon 5459840 5460011 5459840 ID=Msa0751890-mRNA-1:exon:2178;Parent=Msa0751890-mRNA-1
chr5_2 exon 5460135 5460362 5460135 ID=Msa0751890-mRNA-1:exon:2177;Parent=Msa0751890-mRNA-1
chr5_2 exon 5460460 5460561 5460460 ID=Msa0751890-mRNA-1:exon:2176;Parent=Msa0751890-mRNA-1
chr5_2 exon 5460774 5461220 5460774 ID=Msa0751890-mRNA-1:exon:2175;Parent=Msa0751890-mRNA-1
chr5_2 exon 5461409 5461594 5461409 ID=Msa0751890-mRNA-1:exon:2174;Parent=Msa0751890-mRNA-1
chr5_2 exon 5461833 5461950 5461833 ID=Msa0751890-mRNA-1:exon:2173;Parent=Msa0751890-mRNA-1
chr5_2 exon 5462070 5462283 5462070 ID=Msa0751890-mRNA-1:exon:2172;Parent=Msa0751890-mRNA-1
chr5_2 exon 5463393 5463445 5463393 ID=Msa0751890-mRNA-1:exon:2171;Parent=Msa0751890-mRNA-1
chr5_2 five_prime_UTR 5463393 5463445 5463393 ID=Msa0751890-mRNA-1:five_prime_utr;Parent=Msa0751890-mRNA-1
chr5_2 five_prime_UTR 5462255 5462283 5462255 ID=Msa0751890-mRNA-1:five_prime_utr;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5462070 5462254 5462070 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5461833 5461950 5461833 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5461409 5461594 5461409 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5460774 5461220 5460774 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5460460 5460561 5460460 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5460135 5460362 5460135 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5459840 5460011 5459840 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5459486 5459763 5459486 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5459296 5459391 5459296 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 CDS 5458831 5459196 5458831 ID=Msa0751890-mRNA-1:cds;Parent=Msa0751890-mRNA-1
chr5_2 three_prime_UTR 5458813 5458830 5458813 ID=Msa0751890-mRNA-1:three_prime_utr;Parent=Msa0751890-mRNA-1
chr5_2 three_prime_UTR 5458373 5458519 5458373 ID=Msa0751890-mRNA-1:three_prime_utr;Parent=Msa0751890-mRNA-1
Gene Sequence

>Msa0751890

ATGGTTAATACTCCACATCAAAATCACAGCAAGAACATGTATCAGAATAGGATGACAAGAACAAGAGAAGAAGCAAACCAAATGAACGTGGAGGCTCCTTCAAGTGATGACCAACAACCCAACCAACGTCCCAGAAAAAGGACCTATCGCCGCCACACACAGCAACAAATTGATGAAATGGATACTTTCTTCAAGCAGTGTCCTAACCCTAATGATGCTCAGAGAAGAGAGCTGAGCCTTCGGACCGGGTTAGACCCAACGCAAATCAAGTTTTGGTTTCAGAACAGGCGCACTTCACTCAAGGTTCAAACTGATAGGGAAGAGAATGAGCTATTAAAGATTGAGAATGAAAAACTTCGAGATGAAGTTAATAGATACAAGGGGGCAATTGTTACCACATGCAACGTATGTGGAAGTTCCACTACCGCTGGGGAAATGTCACATGACGATCAGCAGCTAAGATTGGAGAATGCTCTCTTAAGGAAAGAGCTTGAAAGGTATATGGGAGAGACGCCGACAGATCCTGCAGATTCCCGTGCCAATATAACATCATCCAACAATAGCACTCATGTTGTTTCACGCTCTGCTGATTTTGGAGTTGCTGGTGGTAACAATGGAGCACACCACCGCATGGTAGGAGAGGCTTTCAGTGTTGGTGGCTCCTCCGTACAGATTAAGGGTCTTAATGAGAAGCAAAGGGTTGTAGAGCTTGCTGTTGTTGGAATGGCTGAACTGACCAAACTGGCTAGGACATATGGACCCCCTCTTTGGCTTCCCACCAATTATGTCACTGAGATTCTCAATGGAGAGGAATACATGAAGTATTTCCCAAGGGCTAATGGTCCCAACACATTGGGATTAAAGCTTGAGGGTTCGAAAGAATCCGTGGTGGTCATGATTAATGCTCCTGATCTTGTAGATATCCTCATGGATGTGAATCAATGGTCAAATATGTTTTGCGGCATTGTTTCTAAAGCAGCAACACTTGAAGTCCTTTCAACTGGAGTGGGAGGTAACTACGATGGAGCCTTGCAAGTGATGACAGCTGAATTTCAAGTCCCCTCCCCACATGTTCCTACTCGTCAAAACCATTTTGTGAGATACTGTAAACTGCATCCAGATGGAATATGGGTAGTGGCTGATGTTTCCTTGCATCTGTTAAATGCACCATCTGCTACTAGTAGTAGTAGTAGTAGTGCTGCTTCAAGAACCCAAAGAAGACCCTCTGGTTGTTTGATTGAGACACTCCCAAATGGTCTTACTAAGGTTACATGGATTGAAAATGTAGAAGTTGATGATCAGGTGGTGCAAAATATATATAAACCTCTAGTTAATTCTGGACTTGCTTTTGGAGCTAAACGCTGGGTAGCTACATTACATCGACAATCTGATCGTCTTGTTTTTAAAACGGCCACCAACGTTCCACGGGAACATCATGTGAGATTGACTCCGGAGGGAAAGAAAAGTATATTGAATCTTGCGGAAAGGTTGGTAGCTAGCTTTAGTACAAGTATTGGTTCTTCTACAACACATGCTTGGACAAAGGTACCTGGAAACGGACCGGAGGTTGTAATGGTCATGACAAAAAGATATATCGATGAATCGAGCATTGACAAACCCGTCAGTGTAGTGCTAAGTGCTGCTACTTCTTTTTGGCTTCCAGTTCCTCCAAGGAGGGTGTTTGATTTTCTTCGAGATCAAAACACAAGAAAACATTGGGATATTCTCTCCGCCGGCGGTATAGTTCATGAATTGGCTCACATTTCAAATGGTCGTGATTCTGGCAACTATGTCTCCTTATTTCGTATCACTAGTGAAAATTCAGAGCAGAGTGATGTGGTAGTACTGCAAGAGAATTGCACTGATGTAACTGGGTCATATGTAGTATATGCGCCTGTGCAAATACCTACAATGCACGAAATCCTGATTGGCGGCGACTCAAGTCGTCTTACTCTGCTTCCTTCCGGATTCGCTATTTTTCCAGATGGGTGCATAACAAATGCAGGACCAATTATGAATGTCGGATCTGGAGGGTCTCTTGTCACAGTTGCATTTCAGATTATAGTTGATTCTATTCCACATGCAAGGCTAGCTCTGGGTTCAATCACCACTGTTAACACTTTGATCAAGAACACCGTGGAAAGGATTAAAACTGCAGTGATGCCTAATGGCATCTAA
Protein sequence

>Msa0751890

MVNTPHQNHSKNMYQNRMTRTREEANQMNVEAPSSDDQQPNQRPRKRTYRRHTQQQIDEMDTFFKQCPNPNDAQRRELSLRTGLDPTQIKFWFQNRRTSLKVQTDREENELLKIENEKLRDEVNRYKGAIVTTCNVCGSSTTAGEMSHDDQQLRLENALLRKELERYMGETPTDPADSRANITSSNNSTHVVSRSADFGVAGGNNGAHHRMVGEAFSVGGSSVQIKGLNEKQRVVELAVVGMAELTKLARTYGPPLWLPTNYVTEILNGEEYMKYFPRANGPNTLGLKLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVSKAATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSLHLLNAPSATSSSSSSAASRTQRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYKPLVNSGLAFGAKRWVATLHRQSDRLVFKTATNVPREHHVRLTPEGKKSILNLAERLVASFSTSIGSSTTHAWTKVPGNGPEVVMVMTKRYIDESSIDKPVSVVLSAATSFWLPVPPRRVFDFLRDQNTRKHWDILSAGGIVHELAHISNGRDSGNYVSLFRITSENSEQSDVVVLQENCTDVTGSYVVYAPVQIPTMHEILIGGDSSRLTLLPSGFAIFPDGCITNAGPIMNVGSGGSLVTVAFQIIVDSIPHARLALGSITTVNTLIKNTVERIKTAVMPNGI*