Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084520 | XP_024625327.1 | 95.464 | 463 | 13 | 3 | 1 | 458 | 1 | 460 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084520 | Q2HTF1 | 95.464 | 463 | 13 | 3 | 1 | 458 | 1 | 460 | 0.0 | 914 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa1084520 | 0.862065 | 6.599239e-64 | -8.615850e-47 |
| Msa0019600 | Msa1084520 | 0.855465 | 6.195829e-62 | -8.615850e-47 |
| Msa0074650 | Msa1084520 | 0.816943 | 4.260254e-52 | -8.615850e-47 |
| Msa0104500 | Msa1084520 | 0.817523 | 3.154773e-52 | -8.615850e-47 |
| Msa0111750 | Msa1084520 | 0.827399 | 1.598171e-54 | -8.615850e-47 |
| Msa0669840 | Msa1084520 | 0.879613 | 1.080075e-69 | -8.615850e-47 |
| Msa0707220 | Msa1084520 | 0.802841 | 4.632707e-49 | -8.615850e-47 |
| Msa0709450 | Msa1084520 | 0.902466 | 9.421362e-79 | -8.615850e-47 |
| Msa0711320 | Msa1084520 | 0.840011 | 1.123885e-57 | -8.615850e-47 |
| Msa0725860 | Msa1084520 | 0.823478 | 1.355531e-53 | -8.615850e-47 |
| Msa0739470 | Msa1084520 | 0.830988 | 2.153275e-55 | -8.615850e-47 |
| Msa0739580 | Msa1084520 | 0.859645 | 3.584515e-63 | -8.615850e-47 |
| Msa0748400 | Msa1084520 | 0.805377 | 1.374690e-49 | -8.615850e-47 |
| Msa0751890 | Msa1084520 | 0.842232 | 2.932844e-58 | -8.615850e-47 |
| Msa0752840 | Msa1084520 | 0.821526 | 3.852731e-53 | -8.615850e-47 |
| Msa0764820 | Msa1084520 | 0.811807 | 5.819696e-51 | -8.615850e-47 |
| Msa0782230 | Msa1084520 | 0.818410 | 1.989074e-52 | -8.615850e-47 |
| Msa0782360 | Msa1084520 | 0.830669 | 2.578020e-55 | -8.615850e-47 |
| Msa0786040 | Msa1084520 | 0.828576 | 8.327138e-55 | -8.615850e-47 |
| Msa0819890 | Msa1084520 | 0.839809 | 1.268527e-57 | -8.615850e-47 |
| Msa0819900 | Msa1084520 | 0.804715 | 1.890792e-49 | -8.615850e-47 |
| Msa0823400 | Msa1084520 | 0.815669 | 8.212977e-52 | -8.615850e-47 |
| Msa0828830 | Msa1084520 | 0.804606 | 1.993128e-49 | -8.615850e-47 |
| Msa0831940 | Msa1084520 | 0.864641 | 1.050535e-64 | -8.615850e-47 |
| Msa0124130 | Msa1084520 | 0.853901 | 1.758331e-61 | -8.615850e-47 |
| Msa0141120 | Msa1084520 | 0.826764 | 2.268038e-54 | -8.615850e-47 |
| Msa0149140 | Msa1084520 | 0.880521 | 5.126246e-70 | -8.615850e-47 |
| Msa0152480 | Msa1084520 | 0.815477 | 9.062462e-52 | -8.615850e-47 |
| Msa0152500 | Msa1084520 | 0.828577 | 8.319367e-55 | -8.615850e-47 |
| Msa0156250 | Msa1084520 | 0.805780 | 1.131282e-49 | -8.615850e-47 |
| Msa0185490 | Msa1084520 | 0.825679 | 4.110034e-54 | -8.615850e-47 |
| Msa0212080 | Msa1084520 | 0.813786 | 2.146218e-51 | -8.615850e-47 |
| Msa0212150 | Msa1084520 | 0.816671 | 4.902989e-52 | -8.615850e-47 |
| Msa0215640 | Msa1084520 | 0.809385 | 1.942262e-50 | -8.615850e-47 |
| Msa0373960 | Msa1084520 | 0.807278 | 5.465680e-50 | -8.615850e-47 |
| Msa0375910 | Msa1084520 | 0.807671 | 4.510115e-50 | -8.615850e-47 |
| Msa0385390 | Msa1084520 | 0.801554 | 8.525275e-49 | -8.615850e-47 |
| Msa0392420 | Msa1084520 | 0.841231 | 5.387790e-58 | -8.615850e-47 |
| Msa0392460 | Msa1084520 | 0.834945 | 2.234946e-56 | -8.615850e-47 |
| Msa0392490 | Msa1084520 | 0.829358 | 5.382376e-55 | -8.615850e-47 |
| Msa0406000 | Msa1084520 | 0.874458 | 6.647237e-68 | -8.615850e-47 |
| Msa0415320 | Msa1084520 | 0.830061 | 3.629582e-55 | -8.615850e-47 |
| Msa0423100 | Msa1084520 | 0.812416 | 4.286513e-51 | -8.615850e-47 |
| Msa0424330 | Msa1084520 | 0.848697 | 5.196011e-60 | -8.615850e-47 |
| Msa0424340 | Msa1084520 | 0.857112 | 2.036951e-62 | -8.615850e-47 |
| Msa0424350 | Msa1084520 | 0.867535 | 1.273726e-65 | -8.615850e-47 |
| Msa0441590 | Msa1084520 | 0.841998 | 3.381749e-58 | -8.615850e-47 |
| Msa0451400 | Msa1084520 | 0.874398 | 6.966415e-68 | -8.615850e-47 |
| Msa0469260 | Msa1084520 | 0.813389 | 2.623628e-51 | -8.615850e-47 |
| Msa0996270 | Msa1084520 | 0.833405 | 5.435024e-56 | -8.615850e-47 |
| Msa0999300 | Msa1084520 | 0.839593 | 1.444161e-57 | -8.615850e-47 |
| Msa0999340 | Msa1084520 | 0.826863 | 2.147763e-54 | -8.615850e-47 |
| Msa0999360 | Msa1084520 | 0.816105 | 6.563194e-52 | -8.615850e-47 |
| Msa0999390 | Msa1084520 | 0.834631 | 2.681096e-56 | -8.615850e-47 |
| Msa0999410 | Msa1084520 | 0.817518 | 3.163427e-52 | -8.615850e-47 |
| Msa0999700 | Msa1084520 | 0.821180 | 4.630058e-53 | -8.615850e-47 |
| Msa1001890 | Msa1084520 | 0.819795 | 9.628296e-53 | -8.615850e-47 |
| Msa1037890 | Msa1084520 | 0.841015 | 6.140559e-58 | -8.615850e-47 |
| Msa1037900 | Msa1084520 | 0.821376 | 4.173066e-53 | -8.615850e-47 |
| Msa1037910 | Msa1084520 | 0.822302 | 2.546842e-53 | -8.615850e-47 |
| Msa1081570 | Msa1084520 | 0.812327 | 4.484033e-51 | -8.615850e-47 |
| Msa1084520 | Msa1092020 | 0.812361 | 4.407101e-51 | -8.615850e-47 |
| Msa1084520 | Msa1125810 | 0.925452 | 1.799414e-90 | -8.615850e-47 |
| Msa1084520 | Msa1127140 | 0.807283 | 5.452396e-50 | -8.615850e-47 |
| Msa1084520 | Msa1129950 | 0.805974 | 1.030178e-49 | -8.615850e-47 |
| Msa1084520 | Msa1129960 | 0.808206 | 3.471003e-50 | -8.615850e-47 |
| Msa1084520 | Msa1130010 | 0.803577 | 3.261436e-49 | -8.615850e-47 |
| Msa1084520 | Msa1135380 | 0.824912 | 6.242241e-54 | -8.615850e-47 |
| Msa1084520 | Msa1145020 | 0.832457 | 9.352721e-56 | -8.615850e-47 |
| Msa1084520 | Msa1171310 | 0.958119 | 5.174341e-116 | -8.615850e-47 |
| Msa1084520 | Msa1201160 | 0.832465 | 9.307118e-56 | -8.615850e-47 |
| Msa1084520 | Msa1228190 | 0.841107 | 5.806655e-58 | -8.615850e-47 |
| Msa1084520 | Msa1271260 | 0.809369 | 1.957895e-50 | -8.615850e-47 |
| Msa1084520 | Msa1294290 | 0.816195 | 6.266892e-52 | -8.615850e-47 |
| Msa1084520 | Msa1305510 | 0.824702 | 6.995326e-54 | -8.615850e-47 |
| Msa1084520 | Msa1326630 | 0.801247 | 9.851101e-49 | -8.615850e-47 |
| Msa1084520 | Msa1369040 | 0.818084 | 2.357500e-52 | -8.615850e-47 |
| Msa1084520 | Msa1378870 | 0.852738 | 3.790048e-61 | -8.615850e-47 |
| Msa1084520 | Msa1379970 | 0.803140 | 4.018157e-49 | -8.615850e-47 |
| Msa1084520 | Msa1389050 | 0.816387 | 5.677932e-52 | -8.615850e-47 |
| Msa1084520 | Msa1394890 | 0.830185 | 3.386070e-55 | -8.615850e-47 |
| Msa1084520 | Msa1406780 | 0.851714 | 7.411831e-61 | -8.615850e-47 |
| Msa1084520 | Msa1421550 | 0.856630 | 2.824413e-62 | -8.615850e-47 |
| Msa1084520 | Msa1423460 | 0.820631 | 6.195157e-53 | -8.615850e-47 |
| Msa1084520 | Msa1431850 | 0.855048 | 8.190153e-62 | -8.615850e-47 |
| Msa1084520 | Msa1435480 | 0.824849 | 6.457687e-54 | -8.615850e-47 |
| Msa1084520 | Msa1459530 | 0.830983 | 2.159709e-55 | -8.615850e-47 |
| Msa1084520 | Msa1461060 | 0.805132 | 1.547313e-49 | -8.615850e-47 |
| Msa1084520 | Msa1462530 | 0.810453 | 1.144137e-50 | -8.615850e-47 |
| Msa0252630 | Msa1084520 | 0.836600 | 8.509384e-57 | -8.615850e-47 |
| Msa0252770 | Msa1084520 | 0.829062 | 6.352654e-55 | -8.615850e-47 |
| Msa0291330 | Msa1084520 | 0.830251 | 3.262497e-55 | -8.615850e-47 |
| Msa0306120 | Msa1084520 | 0.819350 | 1.216160e-52 | -8.615850e-47 |
| Msa0329620 | Msa1084520 | 0.827620 | 1.415140e-54 | -8.615850e-47 |
| Msa0333450 | Msa1084520 | 0.822921 | 1.828461e-53 | -8.615850e-47 |
| Msa0333700 | Msa1084520 | 0.835054 | 2.098001e-56 | -8.615850e-47 |
| Msa0343660 | Msa1084520 | 0.853193 | 2.809922e-61 | -8.615850e-47 |
| Msa0344570 | Msa1084520 | 0.825026 | 5.867228e-54 | -8.615850e-47 |
| Msa0351770 | Msa1084520 | 0.866211 | 3.366120e-65 | -8.615850e-47 |
| Msa0359250 | Msa1084520 | 0.877030 | 8.713014e-69 | -8.615850e-47 |
| Msa0487570 | Msa1084520 | 0.837655 | 4.572135e-57 | -8.615850e-47 |
| Msa0487630 | Msa1084520 | 0.826624 | 2.449551e-54 | -8.615850e-47 |
| Msa0492190 | Msa1084520 | 0.861090 | 1.309548e-63 | -8.615850e-47 |
| Msa0515950 | Msa1084520 | 0.869480 | 3.000813e-66 | -8.615850e-47 |
| Msa0534930 | Msa1084520 | 0.844141 | 9.085479e-59 | -8.615850e-47 |
| Msa0535040 | Msa1084520 | 0.818044 | 2.407290e-52 | -8.615850e-47 |
| Msa0591790 | Msa1084520 | 0.850928 | 1.236590e-60 | -8.615850e-47 |
| Msa0591800 | Msa1084520 | 0.851370 | 9.273609e-61 | -8.615850e-47 |
| Msa0594090 | Msa1084520 | 0.819186 | 1.325509e-52 | -8.615850e-47 |
| Msa0849280 | Msa1084520 | 0.802970 | 4.357000e-49 | -8.615850e-47 |
| Msa0851020 | Msa1084520 | 0.804371 | 2.231092e-49 | -8.615850e-47 |
| Msa0860160 | Msa1084520 | 0.853586 | 2.167208e-61 | -8.615850e-47 |
| Msa0860170 | Msa1084520 | 0.815773 | 7.785043e-52 | -8.615850e-47 |
| Msa0860280 | Msa1084520 | 0.837976 | 3.781045e-57 | -8.615850e-47 |
| Msa0867350 | Msa1084520 | 0.823098 | 1.663285e-53 | -8.615850e-47 |
| Msa0898730 | Msa1084520 | 0.829533 | 4.880763e-55 | -8.615850e-47 |
| Msa0916640 | Msa1084520 | 0.825409 | 4.761075e-54 | -8.615850e-47 |
| Msa0922750 | Msa1084520 | 0.812432 | 4.251688e-51 | -8.615850e-47 |
| Msa0927120 | Msa1084520 | 0.820021 | 8.548565e-53 | -8.615850e-47 |
| Msa0929870 | Msa1084520 | 0.832341 | 9.988033e-56 | -8.615850e-47 |
| Msa0941820 | Msa1084520 | 0.815841 | 7.517045e-52 | -8.615850e-47 |
| Msa0944760 | Msa1084520 | 0.817872 | 2.631666e-52 | -8.615850e-47 |
| Msa0944880 | Msa1084520 | 0.806320 | 8.709045e-50 | -8.615850e-47 |
| Msa0946210 | Msa1084520 | 0.808884 | 2.486442e-50 | -8.615850e-47 |
| Msa0953540 | Msa1084520 | 0.833485 | 5.191334e-56 | -8.615850e-47 |
| Msa0961560 | Msa1084520 | 0.825485 | 4.568157e-54 | -8.615850e-47 |
| Msa0965310 | Msa1084520 | 0.814648 | 1.384132e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084520 | MtrunA17_Chr7g0266601 | 92.453 | 318 | 16 | 3 | 1 | 313 | 1 | 315 | 0.0 | 551 |
| Msa1084520 | MtrunA17_Chr1g0178441 | 51.762 | 454 | 200 | 8 | 9 | 451 | 18 | 463 | 1.38e-161 | 464 |
| Msa1084520 | MtrunA17_Chr7g0266591 | 96.053 | 152 | 6 | 0 | 307 | 458 | 6 | 157 | 1.91e-107 | 315 |
| Msa1084520 | MtrunA17_Chr1g0178421 | 55.987 | 309 | 123 | 5 | 5 | 309 | 3 | 302 | 1.94e-103 | 310 |
| Msa1084520 | MtrunA17_Chr1g0178431 | 78.986 | 138 | 27 | 1 | 307 | 442 | 6 | 143 | 5.26e-78 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084520 | AT3G52610.1 | 46.269 | 469 | 221 | 12 | 9 | 454 | 13 | 473 | 1.14e-138 | 407 |
Find 102 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTCAAATTTACGATTA+TGG | 0.178265 | 7_2:-84883786 | Msa1084520:three_prime_UTR |
| CCTCTCTCAAATCACAATTT+TGG | 0.217496 | 7_2:-84885268 | Msa1084520:intron |
| TCATGGTTTGGGACCATCTA+TGG | 0.223620 | 7_2:-84883967 | Msa1084520:CDS |
| ATGGGGTGTGCTTCGGTTCA+TGG | 0.237066 | 7_2:-84883984 | Msa1084520:CDS |
| TGTGCTTCGGTTCATGGTTT+GGG | 0.291835 | 7_2:-84883978 | Msa1084520:CDS |
| AATAACTGCAGCGGGATTAA+TGG | 0.304334 | 7_2:-84885368 | Msa1084520:CDS |
| GTGTGCTTCGGTTCATGGTT+TGG | 0.307756 | 7_2:-84883979 | Msa1084520:CDS |
| GTCCTCAAACACCGACATTA+TGG | 0.308407 | 7_2:+84884061 | None:intergenic |
| GCGATTGAGGATCTTGTTCC+TGG | 0.311297 | 7_2:-84885813 | Msa1084520:CDS |
| TACTTCATCATATGCATGTT+TGG | 0.345683 | 7_2:-84883738 | Msa1084520:three_prime_UTR |
| CGACATTATGGATGTTCTTA+AGG | 0.349557 | 7_2:+84884073 | None:intergenic |
| TGTTAATAAGCTCTTGCATT+TGG | 0.357546 | 7_2:+84883871 | None:intergenic |
| GCAAAGGGAAGAAACATATC+TGG | 0.359281 | 7_2:-84885788 | Msa1084520:CDS |
| TGAAAACGAGAAATATCAAT+AGG | 0.367993 | 7_2:+84886275 | None:intergenic |
| GAACTAGCCAAGAGGACTTA+TGG | 0.372116 | 7_2:-84884197 | Msa1084520:CDS |
| ATCTAGCCTTCCATCCCTTA+TGG | 0.374376 | 7_2:+84883932 | None:intergenic |
| ATCCATAATGTCGGTGTTTG+AGG | 0.408361 | 7_2:-84884063 | Msa1084520:CDS |
| ACCAGGGTTCTCTATGGCCT+TGG | 0.408629 | 7_2:+84884106 | None:intergenic |
| AGTAAACCTAAAAGAATTAA+CGG | 0.410580 | 7_2:+84885737 | None:intergenic |
| ATCCATCCCCGTTGCACTCT+AGG | 0.410966 | 7_2:-84883896 | Msa1084520:CDS |
| TTTGGTCCCTAGAGTGCAAC+GGG | 0.411997 | 7_2:+84883889 | None:intergenic |
| TACGATCTTGCCACGTGTTA+CGG | 0.414492 | 7_2:+84886033 | None:intergenic |
| CTTATCATTGTTCTTAGAGT+TGG | 0.418380 | 7_2:+84884166 | None:intergenic |
| TTATTACCCTCACTGATTGC+CGG | 0.431014 | 7_2:-84885306 | Msa1084520:CDS |
| TGTCAAACCAGGGTTCTCTA+TGG | 0.431401 | 7_2:+84884100 | None:intergenic |
| CACTCCGTTGCAACAAATCA+TGG | 0.432383 | 7_2:-84886069 | Msa1084520:CDS |
| TGTTGAGGATGTTGTTCCTT+TGG | 0.434930 | 7_2:-84885835 | Msa1084520:CDS |
| CTTAAGGATGATGTCAAACC+AGG | 0.439362 | 7_2:+84884089 | None:intergenic |
| ATGAAGGCTATTCTTATTGA+AGG | 0.442750 | 7_2:-84883846 | Msa1084520:CDS |
| AGCCATAATCGTAAATTTGA+AGG | 0.446489 | 7_2:+84883784 | None:intergenic |
| AAAGCCATTCGTGGTGGCAC+TGG | 0.454895 | 7_2:-84886329 | Msa1084520:CDS |
| TGTTGTTCCTTTGGCGATTG+AGG | 0.458789 | 7_2:-84885826 | Msa1084520:CDS |
| AGGAGTGTGGGATGTAAGAA+AGG | 0.459967 | 7_2:+84886157 | None:intergenic |
| CATGGTTTGGGACCATCTAT+GGG | 0.463005 | 7_2:-84883966 | Msa1084520:CDS |
| GGACTACATGGGGTGTGCTT+CGG | 0.472358 | 7_2:-84883991 | Msa1084520:CDS |
| AAGAATAGTTCTAAGAAGTA+CGG | 0.474242 | 7_2:-84885331 | Msa1084520:CDS |
| TCAACAACCACGTGATCAAA+GGG | 0.475334 | 7_2:-84884235 | Msa1084520:CDS |
| TCCATCCCCGTTGCACTCTA+GGG | 0.489654 | 7_2:-84883895 | Msa1084520:CDS |
| AAATGCTCCATAAGTCCTCT+TGG | 0.502139 | 7_2:+84884190 | None:intergenic |
| TGTTTCTTCCCTTTGCGACC+AGG | 0.508762 | 7_2:+84885795 | None:intergenic |
| ATGTCGACGGTTGAAACAAA+AGG | 0.509382 | 7_2:-84886386 | Msa1084520:CDS |
| TCCCTAGAGTGCAACGGGGA+TGG | 0.509671 | 7_2:+84883894 | None:intergenic |
| TTCAGGGTTGTAAGCAGAGT+AGG | 0.515071 | 7_2:-84885408 | Msa1084520:intron |
| ATCTTGTTCCTGGTCGCAAA+GGG | 0.516393 | 7_2:-84885803 | Msa1084520:CDS |
| CTCAACAACCACGTGATCAA+AGG | 0.519923 | 7_2:-84884236 | Msa1084520:CDS |
| GCAACAAGAGGTTGGAGTAG+AGG | 0.526477 | 7_2:-84884012 | Msa1084520:CDS |
| GGAGAATGTTGTTGCTGTTG+AGG | 0.528626 | 7_2:-84885850 | Msa1084520:CDS |
| CTTTGATCACGTGGTTGTTG+AGG | 0.530369 | 7_2:+84884237 | None:intergenic |
| AGAATAGTTCTAAGAAGTAC+GGG | 0.531546 | 7_2:-84885330 | Msa1084520:CDS |
| AATGCCAGTGCCACCACGAA+TGG | 0.537676 | 7_2:+84886325 | None:intergenic |
| TTGACACCATAAGGGATGGA+AGG | 0.538475 | 7_2:-84883938 | Msa1084520:CDS |
| AGAGCTTATTAACAAGATGA+AGG | 0.539515 | 7_2:-84883862 | Msa1084520:CDS |
| GATCTTGTTCCTGGTCGCAA+AGG | 0.543662 | 7_2:-84885804 | Msa1084520:CDS |
| TGTGGAGCAATAACTGCAGC+GGG | 0.545669 | 7_2:-84885376 | Msa1084520:CDS |
| AAGGCTATTCTTATTGAAGG+TGG | 0.558507 | 7_2:-84883843 | Msa1084520:CDS |
| GAAACAAAAGGTCGTAATGT+TGG | 0.558743 | 7_2:-84886374 | Msa1084520:CDS |
| CATGAACTTTCTTATGTCCA+AGG | 0.562719 | 7_2:-84884123 | Msa1084520:CDS |
| AAAGGAGAAAATAGTGTCTG+TGG | 0.563282 | 7_2:+84886175 | None:intergenic |
| AATTGTGATTTGAGAGAGGT+GGG | 0.571654 | 7_2:+84885272 | None:intergenic |
| TGTTCCATGATTTGTTGCAA+CGG | 0.573358 | 7_2:+84886065 | None:intergenic |
| GGTTGGAGTAGAGGACTACA+TGG | 0.579061 | 7_2:-84884003 | Msa1084520:CDS |
| GGCAAGATGCAACAAGAGGT+TGG | 0.579461 | 7_2:-84884020 | Msa1084520:CDS |
| GAGGACACGGTGGTTGATGA+CGG | 0.580211 | 7_2:-84884044 | Msa1084520:CDS |
| AAATTGTGATTTGAGAGAGG+TGG | 0.580439 | 7_2:+84885271 | None:intergenic |
| TAGCTTAAGTATTATGTCGA+CGG | 0.581330 | 7_2:-84886399 | None:intergenic |
| CAAAGGGAAGAAACATATCT+GGG | 0.581978 | 7_2:-84885787 | Msa1084520:CDS |
| CCAAAATTGTGATTTGAGAG+AGG | 0.582441 | 7_2:+84885268 | None:intergenic |
| TGAGAGAGGTGGGTCAAGAG+TGG | 0.586797 | 7_2:+84885282 | None:intergenic |
| AGCTGGTGCAAAGCCATTCG+TGG | 0.588805 | 7_2:-84886338 | Msa1084520:CDS |
| GATCACGTGGTTGTTGAGGA+TGG | 0.593465 | 7_2:+84884241 | None:intergenic |
| AAACATGTCAGTATCAATAC+CGG | 0.597857 | 7_2:+84886010 | None:intergenic |
| ACAAAAGGTCGTAATGTTGG+TGG | 0.598123 | 7_2:-84886371 | Msa1084520:CDS |
| TTGGTGGCACAGAATGTAGC+TGG | 0.609381 | 7_2:-84886355 | Msa1084520:CDS |
| CTTAAGAACATCCATAATGT+CGG | 0.610419 | 7_2:-84884072 | Msa1084520:CDS |
| AAATGCTAGGTCTTCACAAG+TGG | 0.613957 | 7_2:-84885691 | Msa1084520:CDS |
| AATGTCGGTGTTTGAGGACA+CGG | 0.619648 | 7_2:-84884057 | Msa1084520:CDS |
| ATTTGGTCCCTAGAGTGCAA+CGG | 0.621651 | 7_2:+84883888 | None:intergenic |
| ACAAGATCCTCAATCGCCAA+AGG | 0.623888 | 7_2:+84885819 | None:intergenic |
| AGTGGACCGGCAATCAGTGA+GGG | 0.635780 | 7_2:+84885300 | None:intergenic |
| GTGTGGAGCAATAACTGCAG+CGG | 0.636382 | 7_2:-84885377 | Msa1084520:CDS |
| AACACGTGGCAAGATCGTAC+CGG | 0.650719 | 7_2:-84886029 | Msa1084520:CDS |
| AAGAAACATATCTGGGAGCG+TGG | 0.650935 | 7_2:-84885780 | Msa1084520:CDS |
| CAATCAAACTGATACCAAGA+GGG | 0.655063 | 7_2:-84885655 | Msa1084520:CDS |
| TCCAAGGCCATAGAGAACCC+TGG | 0.655783 | 7_2:-84884107 | Msa1084520:CDS |
| AACAACCACGTGATCAAAGG+GGG | 0.655827 | 7_2:-84884233 | Msa1084520:CDS |
| CGGCGGCAAGATGCAACAAG+AGG | 0.657442 | 7_2:-84884024 | Msa1084520:CDS |
| GTTGGAGTAGAGGACTACAT+GGG | 0.661686 | 7_2:-84884002 | Msa1084520:CDS |
| TCAATCAAACTGATACCAAG+AGG | 0.661853 | 7_2:-84885656 | Msa1084520:CDS |
| GCTTGTGTTGATGAAAGATG+AGG | 0.663457 | 7_2:-84885880 | Msa1084520:CDS |
| GAGTGGACCGGCAATCAGTG+AGG | 0.664520 | 7_2:+84885299 | None:intergenic |
| CAGAGTAGGATTAAGCTGTG+TGG | 0.667291 | 7_2:-84885394 | Msa1084520:CDS |
| GAGGTGGGTCAAGAGTGGAC+CGG | 0.670737 | 7_2:+84885287 | None:intergenic |
| TTAAGGATGATGTCAAACCA+GGG | 0.675705 | 7_2:+84884090 | None:intergenic |
| ATGAACTGAACCGTAACACG+TGG | 0.676263 | 7_2:-84886043 | Msa1084520:CDS |
| TGGTGCAAAGCCATTCGTGG+TGG | 0.684258 | 7_2:-84886335 | Msa1084520:CDS |
| GTCTTTGGGAACTAGCCAAG+AGG | 0.697035 | 7_2:-84884205 | Msa1084520:CDS |
| CAACAACCACGTGATCAAAG+GGG | 0.713289 | 7_2:-84884234 | Msa1084520:CDS |
| TTGGAGTAGAGGACTACATG+GGG | 0.733565 | 7_2:-84884001 | Msa1084520:CDS |
| GACACGGTGGTTGATGACGG+CGG | 0.738900 | 7_2:-84884041 | Msa1084520:CDS |
| AGCATGCGATAGAACAACTG+CGG | 0.738953 | 7_2:-84885922 | Msa1084520:CDS |
| GTCGGTGTTTGAGGACACGG+TGG | 0.755614 | 7_2:-84884054 | Msa1084520:CDS |
| TTGGTCCCTAGAGTGCAACG+GGG | 0.825259 | 7_2:+84883890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATACAAATATCAAATTAAT+TGG | + | chr7_2:84884609-84884628 | None:intergenic | 15.0% |
| !!! | ACTTTTGAATGATTTTTTTA+AGG | - | chr7_2:84885081-84885100 | Msa1084520:intron | 15.0% |
| !! | TAAATTAACACTTTACATAT+AGG | + | chr7_2:84885601-84885620 | None:intergenic | 15.0% |
| !!! | TTAAAAGTTTTTCTTTTTGA+AGG | - | chr7_2:84885618-84885637 | Msa1084520:intron | 15.0% |
| !! | AGTAAACCTAAAAGAATTAA+CGG | + | chr7_2:84884322-84884341 | None:intergenic | 20.0% |
| !! | TTAATGATACAAAAAATGCT+AGG | - | chr7_2:84884352-84884371 | Msa1084520:intron | 20.0% |
| !! | ACCAAACATAAAATAGATTA+GGG | + | chr7_2:84884442-84884461 | None:intergenic | 20.0% |
| !! | AACCAAACATAAAATAGATT+AGG | + | chr7_2:84884443-84884462 | None:intergenic | 20.0% |
| !!! | TAATCTATTTTATGTTTGGT+TGG | - | chr7_2:84884442-84884461 | Msa1084520:intron | 20.0% |
| !!! | CTCATATATATGTTTGATTT+TGG | + | chr7_2:84884565-84884584 | None:intergenic | 20.0% |
| !! | TGAAATGAAATTTGTATTTC+AGG | - | chr7_2:84884631-84884650 | Msa1084520:intron | 20.0% |
| !! | GAAATGAAATTTGTATTTCA+GGG | - | chr7_2:84884632-84884651 | Msa1084520:intron | 20.0% |
| !! | TAGAACCATTAATATGTATA+TGG | - | chr7_2:84884900-84884919 | Msa1084520:intron | 20.0% |
| !! | AAATGTTAACAAATGTCTAT+AGG | + | chr7_2:84885489-84885508 | None:intergenic | 20.0% |
| !! | GATGATTTAGAAATATTGAT+AGG | - | chr7_2:84885756-84885775 | Msa1084520:CDS | 20.0% |
| ! | TGAAAACGAGAAATATCAAT+AGG | + | chr7_2:84883784-84883803 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGCAAGAATGT+TGG | + | chr7_2:84883962-84883981 | None:intergenic | 25.0% |
| !!! | AAGAATAGTTCTAAGAAGTA+CGG | - | chr7_2:84884725-84884744 | Msa1084520:intron | 25.0% |
| !! | GAGAACAGAAAATTGATTTA+TGG | - | chr7_2:84884853-84884872 | Msa1084520:intron | 25.0% |
| ! | CACTTCCATATACATATTAA+TGG | + | chr7_2:84884908-84884927 | None:intergenic | 25.0% |
| ! | CATTAATATGTATATGGAAG+TGG | - | chr7_2:84884906-84884925 | Msa1084520:intron | 25.0% |
| ! | AATAAGGAATGAATGTTGAT+TGG | + | chr7_2:84884955-84884974 | None:intergenic | 25.0% |
| !! | AGTTTTTCTTTTCACGAATA+AGG | + | chr7_2:84884971-84884990 | None:intergenic | 25.0% |
| ! | TCCACTAACAAAAAAAAAAG+AGG | - | chr7_2:84885350-84885369 | Msa1084520:CDS | 25.0% |
| ! | CCACTAACAAAAAAAAAAGA+GGG | - | chr7_2:84885351-84885370 | Msa1084520:CDS | 25.0% |
| ! | AAACGACTCTTTCAATTTAA+TGG | + | chr7_2:84885411-84885430 | None:intergenic | 25.0% |
| !!! | AAGTTTTTCTTTTTGAAGGA+AGG | - | chr7_2:84885622-84885641 | Msa1084520:intron | 25.0% |
| !! | ATTTTGTAGTTTGTGAAGTG+AGG | + | chr7_2:84883809-84883828 | None:intergenic | 30.0% |
| AAACATGTCAGTATCAATAC+CGG | + | chr7_2:84884049-84884068 | None:intergenic | 30.0% | |
| TATGCCTGATGAAAAAACAT+GGG | - | chr7_2:84884086-84884105 | Msa1084520:CDS | 30.0% | |
| ! | GTTACTCCGTTAATTCTTTT+AGG | - | chr7_2:84884313-84884332 | Msa1084520:intron | 30.0% |
| !! | TTTTACATCTAAAACCCTCT+TGG | + | chr7_2:84884418-84884437 | None:intergenic | 30.0% |
| ! | GCCCTAATCTATTTTATGTT+TGG | - | chr7_2:84884438-84884457 | Msa1084520:intron | 30.0% |
| ! | ATGCAGTTTTTGCAAAATCA+TGG | + | chr7_2:84884505-84884524 | None:intergenic | 30.0% |
| !! | AGAATAGTTCTAAGAAGTAC+GGG | - | chr7_2:84884726-84884745 | Msa1084520:intron | 30.0% |
| ! | CATTTAAGATGAGATAGAGA+GGG | + | chr7_2:84885188-84885207 | None:intergenic | 30.0% |
| ! | TCATTTAAGATGAGATAGAG+AGG | + | chr7_2:84885189-84885208 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTAGTGGATGAAG+TGG | + | chr7_2:84885345-84885364 | None:intergenic | 30.0% |
| !!! | CCCTCTTTTTTTTTTGTTAG+TGG | + | chr7_2:84885354-84885373 | None:intergenic | 30.0% |
| GTGCATATGTTTCAATGTAT+AGG | - | chr7_2:84885778-84885797 | Msa1084520:CDS | 30.0% | |
| CTTATCATTGTTCTTAGAGT+TGG | + | chr7_2:84885893-84885912 | None:intergenic | 30.0% | |
| CTTAAGAACATCCATAATGT+CGG | - | chr7_2:84885984-84886003 | Msa1084520:CDS | 30.0% | |
| TGTTAATAAGCTCTTGCATT+TGG | + | chr7_2:84886188-84886207 | None:intergenic | 30.0% | |
| AGAGCTTATTAACAAGATGA+AGG | - | chr7_2:84886194-84886213 | Msa1084520:CDS | 30.0% | |
| ATGAAGGCTATTCTTATTGA+AGG | - | chr7_2:84886210-84886229 | Msa1084520:CDS | 30.0% | |
| CACCTTCAAATTTACGATTA+TGG | - | chr7_2:84886270-84886289 | Msa1084520:CDS | 30.0% | |
| AGCCATAATCGTAAATTTGA+AGG | + | chr7_2:84886275-84886294 | None:intergenic | 30.0% | |
| TACTTCATCATATGCATGTT+TGG | - | chr7_2:84886318-84886337 | Msa1084520:CDS | 30.0% | |
| GAAACAAAAGGTCGTAATGT+TGG | - | chr7_2:84883682-84883701 | Msa1084520:three_prime_UTR | 35.0% | |
| ! | TTTTGATCTGAGGATAGGAT+GGG | + | chr7_2:84883833-84883852 | None:intergenic | 35.0% |
| ! | ATGATGATGATGATGTGTTG+TGG | + | chr7_2:84883858-84883877 | None:intergenic | 35.0% |
| AAAGGAGAAAATAGTGTCTG+TGG | + | chr7_2:84883884-84883903 | None:intergenic | 35.0% | |
| !! | GATTTTGATGAAAGGAGTGT+GGG | + | chr7_2:84883914-84883933 | None:intergenic | 35.0% |
| !! | TGAGACTCGATTTTGATGAA+AGG | + | chr7_2:84883922-84883941 | None:intergenic | 35.0% |
| !! | TGTTCCATGATTTGTTGCAA+CGG | + | chr7_2:84883994-84884013 | None:intergenic | 35.0% |
| CTATGCCTGATGAAAAAACA+TGG | - | chr7_2:84884085-84884104 | Msa1084520:CDS | 35.0% | |
| GATGAAAGATGAGGAAAAAG+AGG | - | chr7_2:84884185-84884204 | Msa1084520:CDS | 35.0% | |
| CAAAGGGAAGAAACATATCT+GGG | - | chr7_2:84884269-84884288 | Msa1084520:intron | 35.0% | |
| TCAATCAAACTGATACCAAG+AGG | - | chr7_2:84884400-84884419 | Msa1084520:intron | 35.0% | |
| CAATCAAACTGATACCAAGA+GGG | - | chr7_2:84884401-84884420 | Msa1084520:intron | 35.0% | |
| CATCGTACAAGATTAAGTAC+CGG | - | chr7_2:84884473-84884492 | Msa1084520:intron | 35.0% | |
| ATCGTACAAGATTAAGTACC+GGG | - | chr7_2:84884474-84884493 | Msa1084520:intron | 35.0% | |
| AATTGTGATTTGAGAGAGGT+GGG | + | chr7_2:84884787-84884806 | None:intergenic | 35.0% | |
| AAATTGTGATTTGAGAGAGG+TGG | + | chr7_2:84884788-84884807 | None:intergenic | 35.0% | |
| CCAAAATTGTGATTTGAGAG+AGG | + | chr7_2:84884791-84884810 | None:intergenic | 35.0% | |
| ! | CCTCTCTCAAATCACAATTT+TGG | - | chr7_2:84884788-84884807 | Msa1084520:intron | 35.0% |
| TATGTATATGGAAGTGGAAG+TGG | - | chr7_2:84884912-84884931 | Msa1084520:intron | 35.0% | |
| ! | AGGAATGAATGTTGATTGGT+CGG | + | chr7_2:84884951-84884970 | None:intergenic | 35.0% |
| TAAATTCGCACGCAATTGTA+AGG | + | chr7_2:84885312-84885331 | None:intergenic | 35.0% | |
| ATCAATTTCCTTGATACACG+AGG | - | chr7_2:84885545-84885564 | Msa1084520:intron | 35.0% | |
| ! | TGATAAGCACTTTTCAGACA+TGG | - | chr7_2:84885906-84885925 | Msa1084520:CDS | 35.0% |
| CATGAACTTTCTTATGTCCA+AGG | - | chr7_2:84885933-84885952 | Msa1084520:CDS | 35.0% | |
| TTAAGGATGATGTCAAACCA+GGG | + | chr7_2:84885969-84885988 | None:intergenic | 35.0% | |
| CGACATTATGGATGTTCTTA+AGG | + | chr7_2:84885986-84886005 | None:intergenic | 35.0% | |
| GTGTCAAAAATACCCATAGA+TGG | + | chr7_2:84886105-84886124 | None:intergenic | 35.0% | |
| !! | TGGGTATTTTTGACACCATA+AGG | - | chr7_2:84886109-84886128 | Msa1084520:CDS | 35.0% |
| !! | GGGTATTTTTGACACCATAA+GGG | - | chr7_2:84886110-84886129 | Msa1084520:CDS | 35.0% |
| ! | ATTTTTGACACCATAAGGGA+TGG | - | chr7_2:84886114-84886133 | Msa1084520:CDS | 35.0% |
| AAGGCTATTCTTATTGAAGG+TGG | - | chr7_2:84886213-84886232 | Msa1084520:CDS | 35.0% | |
| ATGTCGACGGTTGAAACAAA+AGG | - | chr7_2:84883670-84883689 | Msa1084520:three_prime_UTR | 40.0% | |
| ACAAAAGGTCGTAATGTTGG+TGG | - | chr7_2:84883685-84883704 | Msa1084520:three_prime_UTR | 40.0% | |
| !! | GTTTTGATCTGAGGATAGGA+TGG | + | chr7_2:84883834-84883853 | None:intergenic | 40.0% |
| !! | TGGAGTTTTGATCTGAGGAT+AGG | + | chr7_2:84883838-84883857 | None:intergenic | 40.0% |
| !! | TGTTGTGGAGTTTTGATCTG+AGG | + | chr7_2:84883843-84883862 | None:intergenic | 40.0% |
| !! | CGATTTTGATGAAAGGAGTG+TGG | + | chr7_2:84883915-84883934 | None:intergenic | 40.0% |
| !!! | ACCACCCATGTTTTTTCATC+AGG | + | chr7_2:84884093-84884112 | None:intergenic | 40.0% |
| TGATGAAAAAACATGGGTGG+TGG | - | chr7_2:84884092-84884111 | Msa1084520:CDS | 40.0% | |
| ! | GCTTGTGTTGATGAAAGATG+AGG | - | chr7_2:84884176-84884195 | Msa1084520:CDS | 40.0% |
| TGTTGAGGATGTTGTTCCTT+TGG | - | chr7_2:84884221-84884240 | Msa1084520:CDS | 40.0% | |
| GCAAAGGGAAGAAACATATC+TGG | - | chr7_2:84884268-84884287 | Msa1084520:intron | 40.0% | |
| AAATGCTAGGTCTTCACAAG+TGG | - | chr7_2:84884365-84884384 | Msa1084520:intron | 40.0% | |
| TGCAAAATCATGGTGATTCC+CGG | + | chr7_2:84884495-84884514 | None:intergenic | 40.0% | |
| AATAACTGCAGCGGGATTAA+TGG | - | chr7_2:84884688-84884707 | Msa1084520:intron | 40.0% | |
| ! | TTATTACCCTCACTGATTGC+CGG | - | chr7_2:84884750-84884769 | Msa1084520:intron | 40.0% |
| AGAAAAACTAACTCTGCAGC+TGG | - | chr7_2:84884982-84885001 | Msa1084520:intron | 40.0% | |
| CAAAGTAACCTCGTGTATCA+AGG | + | chr7_2:84885556-84885575 | None:intergenic | 40.0% | |
| CTTGATACACGAGGTTACTT+TGG | - | chr7_2:84885554-84885573 | Msa1084520:intron | 40.0% | |
| TCAACAACCACGTGATCAAA+GGG | - | chr7_2:84885821-84885840 | Msa1084520:CDS | 40.0% | |
| AAATGCTCCATAAGTCCTCT+TGG | + | chr7_2:84885869-84885888 | None:intergenic | 40.0% | |
| CTTAAGGATGATGTCAAACC+AGG | + | chr7_2:84885970-84885989 | None:intergenic | 40.0% | |
| ! | ATCCATAATGTCGGTGTTTG+AGG | - | chr7_2:84885993-84886012 | Msa1084520:CDS | 40.0% |
| TGAAGGTGGAAAAACATACG+AGG | - | chr7_2:84886227-84886246 | Msa1084520:CDS | 40.0% | |
| ! | AGGAGTGTGGGATGTAAGAA+AGG | + | chr7_2:84883902-84883921 | None:intergenic | 45.0% |
| CACTCCGTTGCAACAAATCA+TGG | - | chr7_2:84883987-84884006 | Msa1084520:CDS | 45.0% | |
| ATGAACTGAACCGTAACACG+TGG | - | chr7_2:84884013-84884032 | Msa1084520:CDS | 45.0% | |
| TACGATCTTGCCACGTGTTA+CGG | + | chr7_2:84884026-84884045 | None:intergenic | 45.0% | |
| GCCTGATGAAAAAACATGGG+TGG | - | chr7_2:84884089-84884108 | Msa1084520:CDS | 45.0% | |
| AGCATGCGATAGAACAACTG+CGG | - | chr7_2:84884134-84884153 | Msa1084520:CDS | 45.0% | |
| ! | GGAGAATGTTGTTGCTGTTG+AGG | - | chr7_2:84884206-84884225 | Msa1084520:CDS | 45.0% |
| TGTTGTTCCTTTGGCGATTG+AGG | - | chr7_2:84884230-84884249 | Msa1084520:CDS | 45.0% | |
| ACAAGATCCTCAATCGCCAA+AGG | + | chr7_2:84884240-84884259 | None:intergenic | 45.0% | |
| ATCTTGTTCCTGGTCGCAAA+GGG | - | chr7_2:84884253-84884272 | Msa1084520:CDS | 45.0% | |
| AAGAAACATATCTGGGAGCG+TGG | - | chr7_2:84884276-84884295 | Msa1084520:intron | 45.0% | |
| TTCAGGGTTGTAAGCAGAGT+AGG | - | chr7_2:84884648-84884667 | Msa1084520:intron | 45.0% | |
| CAGAGTAGGATTAAGCTGTG+TGG | - | chr7_2:84884662-84884681 | Msa1084520:intron | 45.0% | |
| GCAAGCAAAACTTTGCGTAC+AGG | - | chr7_2:84885037-84885056 | Msa1084520:intron | 45.0% | |
| CTTTGATCACGTGGTTGTTG+AGG | + | chr7_2:84885822-84885841 | None:intergenic | 45.0% | |
| CTCAACAACCACGTGATCAA+AGG | - | chr7_2:84885820-84885839 | Msa1084520:CDS | 45.0% | |
| CAACAACCACGTGATCAAAG+GGG | - | chr7_2:84885822-84885841 | Msa1084520:CDS | 45.0% | |
| AACAACCACGTGATCAAAGG+GGG | - | chr7_2:84885823-84885842 | Msa1084520:CDS | 45.0% | |
| TCAAAGGGGGAGAAAGTCTT+TGG | - | chr7_2:84885836-84885855 | Msa1084520:CDS | 45.0% | |
| CAAAGGGGGAGAAAGTCTTT+GGG | - | chr7_2:84885837-84885856 | Msa1084520:CDS | 45.0% | |
| GAACTAGCCAAGAGGACTTA+TGG | - | chr7_2:84885859-84885878 | Msa1084520:CDS | 45.0% | |
| TGTCAAACCAGGGTTCTCTA+TGG | + | chr7_2:84885959-84885978 | None:intergenic | 45.0% | |
| GTCCTCAAACACCGACATTA+TGG | + | chr7_2:84885998-84886017 | None:intergenic | 45.0% | |
| ! | AATGTCGGTGTTTGAGGACA+CGG | - | chr7_2:84885999-84886018 | Msa1084520:CDS | 45.0% |
| GTTGGAGTAGAGGACTACAT+GGG | - | chr7_2:84886054-84886073 | Msa1084520:CDS | 45.0% | |
| TTGGAGTAGAGGACTACATG+GGG | - | chr7_2:84886055-84886074 | Msa1084520:CDS | 45.0% | |
| TGTGCTTCGGTTCATGGTTT+GGG | - | chr7_2:84886078-84886097 | Msa1084520:CDS | 45.0% | |
| ! | TCATGGTTTGGGACCATCTA+TGG | - | chr7_2:84886089-84886108 | Msa1084520:CDS | 45.0% |
| ! | CATGGTTTGGGACCATCTAT+GGG | - | chr7_2:84886090-84886109 | Msa1084520:CDS | 45.0% |
| TTGACACCATAAGGGATGGA+AGG | - | chr7_2:84886118-84886137 | Msa1084520:CDS | 45.0% | |
| ! | ATCTAGCCTTCCATCCCTTA+TGG | + | chr7_2:84886127-84886146 | None:intergenic | 45.0% |
| ATTTGGTCCCTAGAGTGCAA+CGG | + | chr7_2:84886171-84886190 | None:intergenic | 45.0% | |
| ! | TTGGTGGCACAGAATGTAGC+TGG | - | chr7_2:84883701-84883720 | Msa1084520:three_prime_UTR | 50.0% |
| AACACGTGGCAAGATCGTAC+CGG | - | chr7_2:84884027-84884046 | Msa1084520:CDS | 50.0% | |
| GCGATTGAGGATCTTGTTCC+TGG | - | chr7_2:84884243-84884262 | Msa1084520:CDS | 50.0% | |
| GATCTTGTTCCTGGTCGCAA+AGG | - | chr7_2:84884252-84884271 | Msa1084520:CDS | 50.0% | |
| TGTTTCTTCCCTTTGCGACC+AGG | + | chr7_2:84884264-84884283 | None:intergenic | 50.0% | |
| GTGTGGAGCAATAACTGCAG+CGG | - | chr7_2:84884679-84884698 | Msa1084520:intron | 50.0% | |
| TGTGGAGCAATAACTGCAGC+GGG | - | chr7_2:84884680-84884699 | Msa1084520:intron | 50.0% | |
| GATCACGTGGTTGTTGAGGA+TGG | + | chr7_2:84885818-84885837 | None:intergenic | 50.0% | |
| TTTCTCCCCCTTTGATCACG+TGG | + | chr7_2:84885831-84885850 | None:intergenic | 50.0% | |
| ! | GTCTTTGGGAACTAGCCAAG+AGG | - | chr7_2:84885851-84885870 | Msa1084520:CDS | 50.0% |
| GGCAAGATGCAACAAGAGGT+TGG | - | chr7_2:84886036-84886055 | Msa1084520:CDS | 50.0% | |
| GCAACAAGAGGTTGGAGTAG+AGG | - | chr7_2:84886044-84886063 | Msa1084520:CDS | 50.0% | |
| GGTTGGAGTAGAGGACTACA+TGG | - | chr7_2:84886053-84886072 | Msa1084520:CDS | 50.0% | |
| GTGTGCTTCGGTTCATGGTT+TGG | - | chr7_2:84886077-84886096 | Msa1084520:CDS | 50.0% | |
| TTTGGTCCCTAGAGTGCAAC+GGG | + | chr7_2:84886170-84886189 | None:intergenic | 50.0% | |
| AGCTGGTGCAAAGCCATTCG+TGG | - | chr7_2:84883718-84883737 | Msa1084520:three_prime_UTR | 55.0% | |
| TGGTGCAAAGCCATTCGTGG+TGG | - | chr7_2:84883721-84883740 | Msa1084520:three_prime_UTR | 55.0% | |
| AAAGCCATTCGTGGTGGCAC+TGG | - | chr7_2:84883727-84883746 | Msa1084520:three_prime_UTR | 55.0% | |
| AATGCCAGTGCCACCACGAA+TGG | + | chr7_2:84883734-84883753 | None:intergenic | 55.0% | |
| AGTGGACCGGCAATCAGTGA+GGG | + | chr7_2:84884759-84884778 | None:intergenic | 55.0% | |
| TGAGAGAGGTGGGTCAAGAG+TGG | + | chr7_2:84884777-84884796 | None:intergenic | 55.0% | |
| TCCAAGGCCATAGAGAACCC+TGG | - | chr7_2:84885949-84885968 | Msa1084520:CDS | 55.0% | |
| ACCAGGGTTCTCTATGGCCT+TGG | + | chr7_2:84885953-84885972 | None:intergenic | 55.0% | |
| !! | GAGGACACGGTGGTTGATGA+CGG | - | chr7_2:84886012-84886031 | Msa1084520:CDS | 55.0% |
| GGACTACATGGGGTGTGCTT+CGG | - | chr7_2:84886065-84886084 | Msa1084520:CDS | 55.0% | |
| ATGGGGTGTGCTTCGGTTCA+TGG | - | chr7_2:84886072-84886091 | Msa1084520:CDS | 55.0% | |
| ATCCATCCCCGTTGCACTCT+AGG | - | chr7_2:84886160-84886179 | Msa1084520:CDS | 55.0% | |
| TCCATCCCCGTTGCACTCTA+GGG | - | chr7_2:84886161-84886180 | Msa1084520:CDS | 55.0% | |
| TTGGTCCCTAGAGTGCAACG+GGG | + | chr7_2:84886169-84886188 | None:intergenic | 55.0% | |
| GAGTGGACCGGCAATCAGTG+AGG | + | chr7_2:84884760-84884779 | None:intergenic | 60.0% | |
| GAGGTGGGTCAAGAGTGGAC+CGG | + | chr7_2:84884772-84884791 | None:intergenic | 60.0% | |
| ! | GTCGGTGTTTGAGGACACGG+TGG | - | chr7_2:84886002-84886021 | Msa1084520:CDS | 60.0% |
| !! | GACACGGTGGTTGATGACGG+CGG | - | chr7_2:84886015-84886034 | Msa1084520:CDS | 60.0% |
| CGGCGGCAAGATGCAACAAG+AGG | - | chr7_2:84886032-84886051 | Msa1084520:CDS | 60.0% | |
| TCCCTAGAGTGCAACGGGGA+TGG | + | chr7_2:84886165-84886184 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84883670 | 84886408 | 84883670 | ID=Msa1084520;Name=Msa1084520 |
| chr7_2 | mRNA | 84883670 | 84886408 | 84883670 | ID=Msa1084520-mRNA-1;Parent=Msa1084520;Name=Msa1084520-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0.33|1|1|1|3|151|458 |
| chr7_2 | exon | 84883670 | 84884278 | 84883670 | ID=Msa1084520-mRNA-1:exon:22804;Parent=Msa1084520-mRNA-1 |
| chr7_2 | exon | 84885269 | 84885425 | 84885269 | ID=Msa1084520-mRNA-1:exon:22803;Parent=Msa1084520-mRNA-1 |
| chr7_2 | exon | 84885647 | 84886408 | 84885647 | ID=Msa1084520-mRNA-1:exon:22802;Parent=Msa1084520-mRNA-1 |
| chr7_2 | CDS | 84885647 | 84886408 | 84885647 | ID=Msa1084520-mRNA-1:cds;Parent=Msa1084520-mRNA-1 |
| chr7_2 | CDS | 84885269 | 84885425 | 84885269 | ID=Msa1084520-mRNA-1:cds;Parent=Msa1084520-mRNA-1 |
| chr7_2 | CDS | 84883821 | 84884278 | 84883821 | ID=Msa1084520-mRNA-1:cds;Parent=Msa1084520-mRNA-1 |
| chr7_2 | three_prime_UTR | 84883670 | 84883820 | 84883670 | ID=Msa1084520-mRNA-1:three_prime_utr;Parent=Msa1084520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
