AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0725860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0725860 MtrunA17_Chr5g0417621 94.774 421 16 3 24 440 23 441 0.0 829
Msa0725860 MtrunA17_Chr4g0042501 58.145 399 135 14 24 407 1 382 2.23e-137 400
Msa0725860 MtrunA17_Chr7g0254261 80.833 120 23 0 128 247 82 201 8.38e-67 217
Msa0725860 MtrunA17_Chr3g0125801 79.508 122 24 1 133 254 14 134 1.84e-61 201
Msa0725860 MtrunA17_Chr6g0480581 66.917 133 43 1 133 264 2 134 9.61e-60 195
Msa0725860 MtrunA17_Chr6g0460671 49.754 203 92 3 100 292 61 263 1.28e-58 196
Msa0725860 MtrunA17_Chr6g0460661 53.077 130 60 1 127 255 8 137 3.64e-45 154
Msa0725860 MtrunA17_Chr4g0008551 57.843 102 43 0 134 235 37 138 8.11e-39 143
Msa0725860 MtrunA17_Chr5g0401731 56.436 101 44 0 135 235 15 115 4.28e-38 140
Msa0725860 MtrunA17_Chr4g0053431 57.426 101 43 0 135 235 5 105 2.35e-37 137
Msa0725860 MtrunA17_Chr6g0454921 54.455 101 46 0 135 235 15 115 1.41e-35 130
Msa0725860 MtrunA17_Chr7g0238631 57.282 103 44 0 134 236 112 214 3.01e-34 134
Msa0725860 MtrunA17_Chr3g0133601 54.455 101 46 0 135 235 37 137 1.86e-33 125
Msa0725860 MtrunA17_Chr5g0437321 50.877 114 52 2 116 229 4 113 2.40e-32 124
Msa0725860 MtrunA17_Chr1g0157731 42.553 141 73 2 134 274 90 222 8.43e-32 129
Msa0725860 MtrunA17_Chr3g0139671 50.980 102 50 0 135 236 85 186 6.20e-31 126
Msa0725860 MtrunA17_Chr5g0429661 47.500 120 63 0 116 235 103 222 2.77e-30 120
Msa0725860 MtrunA17_Chr4g0058991 45.038 131 68 2 134 260 208 338 4.34e-29 118
Msa0725860 MtrunA17_Chr3g0117511 40.816 147 83 2 118 260 166 312 1.32e-27 114
Msa0725860 MtrunA17_Chr5g0397841 54.348 92 42 0 138 229 113 204 7.05e-27 112
Msa0725860 MtrunA17_Chr2g0309911 47.273 110 55 2 132 239 10 118 2.13e-26 108
Msa0725860 MtrunA17_Chr2g0323351 45.133 113 59 2 135 245 14 125 2.91e-26 106
Msa0725860 MtrunA17_Chr1g0187761 41.860 129 72 2 135 261 14 141 3.71e-26 106
Msa0725860 MtrunA17_Chr3g0103281 46.078 102 54 1 135 235 14 115 4.01e-26 108
Msa0725860 MtrunA17_Chr4g0022901 49.515 103 49 2 135 235 15 116 5.99e-26 106
Msa0725860 MtrunA17_Chr4g0022931 40.441 136 78 2 129 262 9 143 1.01e-25 105
Msa0725860 MtrunA17_Chr2g0311221 49.505 101 50 1 131 230 12 112 1.05e-25 107
Msa0725860 MtrunA17_Chr6g0470971 43.519 108 60 1 129 235 10 117 1.60e-25 105
Msa0725860 MtrunA17_Chr4g0022911 49.515 103 49 2 135 235 15 116 2.25e-25 105
Msa0725860 MtrunA17_Chr7g0228531 49.505 101 50 1 135 235 220 319 2.43e-25 107
Msa0725860 MtrunA17_Chr4g0030881 45.872 109 51 2 135 235 9 117 9.33e-25 102
Msa0725860 MtrunA17_Chr8g0387421 43.590 117 60 2 128 238 2 118 1.01e-24 103
Msa0725860 MtrunA17_Chr4g0055981 42.157 102 58 1 135 235 57 158 1.24e-24 101
Msa0725860 MtrunA17_Chr4g0048511 39.189 148 73 3 124 270 8 139 1.26e-24 104
Msa0725860 MtrunA17_Chr7g0220341 40.650 123 68 2 116 235 10 130 1.31e-24 102
Msa0725860 MtrunA17_Chr8g0342541 46.226 106 54 2 132 235 11 115 1.93e-24 103
Msa0725860 MtrunA17_Chr3g0088461 42.735 117 66 1 122 237 11 127 1.94e-24 103
Msa0725860 MtrunA17_Chr5g0417821 45.098 102 55 1 135 235 9 110 2.20e-24 102
Msa0725860 MtrunA17_Chr1g0203411 36.145 166 85 4 135 280 14 178 2.60e-24 102
Msa0725860 MtrunA17_Chr3g0099131 42.727 110 62 1 135 243 43 152 2.80e-24 105
Msa0725860 MtrunA17_Chr8g0360111 46.000 100 53 1 135 233 27 126 3.09e-24 101
Msa0725860 MtrunA17_Chr3g0115821 44.828 116 56 3 128 236 2 116 3.62e-24 102
Msa0725860 MtrunA17_Chr7g0274581 43.810 105 58 1 135 238 14 118 3.63e-24 99.8
Msa0725860 MtrunA17_Chr1g0211161 42.727 110 60 2 132 239 12 120 4.17e-24 100
Msa0725860 MtrunA17_Chr7g0228891 46.667 105 53 2 135 237 14 117 5.11e-24 100
Msa0725860 MtrunA17_Chr1g0193371 42.202 109 60 2 132 238 11 118 6.88e-24 102
Msa0725860 MtrunA17_Chr1g0209661 36.025 161 87 4 120 269 19 174 7.25e-24 101
Msa0725860 MtrunA17_Chr3g0117091 42.727 110 60 2 132 239 11 119 7.45e-24 102
Msa0725860 MtrunA17_Chr7g0270891 41.284 109 63 1 132 239 11 119 7.67e-24 102
Msa0725860 MtrunA17_Chr4g0070611 34.132 167 100 4 128 284 2 168 8.20e-24 101
Msa0725860 MtrunA17_Chr5g0434911 43.137 102 57 1 135 235 23 124 9.67e-24 100
Msa0725860 MtrunA17_Chr8g0342521 45.283 106 55 2 132 235 11 115 9.92e-24 101
Msa0725860 MtrunA17_Chr5g0397231 48.980 98 49 1 132 228 11 108 1.10e-23 101
Msa0725860 MtrunA17_Chr5g0434841 44.118 102 56 1 135 235 22 123 1.27e-23 100
Msa0725860 MtrunA17_Chr1g0203441 42.857 105 59 1 132 235 12 116 1.37e-23 99.8
Msa0725860 MtrunA17_Chr2g0327821 43.925 107 57 2 135 239 8 113 1.41e-23 99.0
Msa0725860 MtrunA17_Chr7g0228991 35.294 170 95 5 135 301 31 188 1.78e-23 99.4
Msa0725860 MtrunA17_Chr2g0330041 46.226 106 54 2 132 235 11 115 1.91e-23 101
Msa0725860 MtrunA17_Chr1g0193801 40.367 109 64 1 132 239 11 119 2.55e-23 101
Msa0725860 MtrunA17_Chr4g0058631 40.367 109 64 1 132 239 11 119 2.56e-23 100
Msa0725860 MtrunA17_Chr5g0400821 35.227 176 99 6 135 299 14 185 2.71e-23 99.8
Msa0725860 MtrunA17_Chr8g0342481 46.226 106 55 1 132 235 11 116 2.75e-23 101
Msa0725860 MtrunA17_Chr8g0354661 37.748 151 85 3 113 255 11 160 2.89e-23 102
Msa0725860 MtrunA17_Chr4g0032401 40.164 122 69 2 120 240 7 125 2.97e-23 100
Msa0725860 MtrunA17_Chr4g0070641 40.171 117 64 2 128 238 2 118 3.36e-23 95.9
Msa0725860 MtrunA17_Chr1g0154031 45.946 111 57 2 135 243 78 187 3.57e-23 100
Msa0725860 MtrunA17_Chr5g0434831 42.157 102 58 1 135 235 9 110 4.82e-23 95.9
Msa0725860 MtrunA17_Chr7g0228481 50.000 96 47 1 135 230 220 314 5.42e-23 100
Msa0725860 MtrunA17_Chr5g0435101 45.192 104 54 2 135 236 13 115 6.56e-23 96.3
Msa0725860 MtrunA17_Chr6g0452271 45.098 102 55 1 135 235 14 115 6.83e-23 99.0
Msa0725860 MtrunA17_Chr2g0328771 42.727 110 60 2 135 242 22 130 6.83e-23 98.6
Msa0725860 MtrunA17_Chr1g0192411 38.710 124 68 2 115 237 1 117 7.55e-23 100
Msa0725860 MtrunA17_Chr4g0022891 39.496 119 64 3 135 246 14 131 7.64e-23 97.1
Msa0725860 MtrunA17_Chr7g0271241 46.000 100 51 2 132 229 11 109 7.86e-23 99.8
Msa0725860 MtrunA17_Chr8g0343831 38.889 108 65 1 135 241 10 117 7.92e-23 97.1
Msa0725860 MtrunA17_Chr5g0410961 42.105 114 60 2 128 235 2 115 8.12e-23 99.0
Msa0725860 MtrunA17_Chr2g0281071 43.363 113 59 2 124 235 8 116 8.60e-23 99.0
Msa0725860 MtrunA17_Chr5g0434931 42.157 102 58 1 135 235 37 138 8.89e-23 97.8
Msa0725860 MtrunA17_Chr4g0037141 42.241 116 59 3 128 236 2 116 1.32e-22 97.4
Msa0725860 MtrunA17_Chr2g0323411 45.283 106 57 1 131 235 10 115 1.44e-22 97.8
Msa0725860 MtrunA17_Chr5g0395281 39.098 133 75 3 131 258 10 141 1.72e-22 97.4
Msa0725860 MtrunA17_Chr1g0167691 39.098 133 74 3 135 261 14 145 2.38e-22 95.9
Msa0725860 MtrunA17_Chr4g0039971 39.098 133 75 3 131 258 11 142 2.52e-22 97.8
Msa0725860 MtrunA17_Chr3g0131121 43.269 104 56 2 135 236 14 116 2.82e-22 96.7
Msa0725860 MtrunA17_Chr1g0151941 43.925 107 58 2 132 236 11 117 5.07e-22 94.7
Msa0725860 MtrunA17_Chr1g0186061 41.818 110 61 2 135 242 22 130 5.11e-22 95.1
Msa0725860 MtrunA17_Chr3g0080861 44.762 105 55 2 135 237 39 142 5.41e-22 98.6
Msa0725860 MtrunA17_Chr7g0261281 44.231 104 55 2 135 236 14 116 7.81e-22 94.7
Msa0725860 MtrunA17_Chr8g0346561 39.474 114 63 2 128 235 2 115 8.85e-22 95.1
Msa0725860 MtrunA17_Chr7g0217221 40.367 109 64 1 135 242 14 122 9.24e-22 94.4
Msa0725860 MtrunA17_Chr1g0167661 33.540 161 100 3 135 289 14 173 9.48e-22 94.0
Msa0725860 MtrunA17_Chr1g0180391 41.441 111 62 2 135 243 21 130 9.58e-22 93.6
Msa0725860 MtrunA17_Chr7g0228401 44.660 103 56 1 146 248 290 391 1.01e-21 97.4
Msa0725860 MtrunA17_Chr4g0022881 43.299 97 52 2 135 229 14 109 1.50e-21 92.8
Msa0725860 MtrunA17_Chr1g0194301 40.566 106 60 2 135 238 35 139 1.84e-21 94.0
Msa0725860 MtrunA17_Chr3g0135311 39.344 122 67 3 135 249 14 135 1.92e-21 95.1
Msa0725860 MtrunA17_Chr8g0334881 50.000 96 46 2 135 228 12 107 2.11e-21 94.4
Msa0725860 MtrunA17_Chr1g0168661 44.660 103 54 2 135 235 23 124 2.19e-21 93.2
Msa0725860 MtrunA17_Chr3g0121241 39.623 106 63 1 135 239 44 149 2.89e-21 94.0
Msa0725860 MtrunA17_Chr7g0275911 37.288 118 68 2 128 239 2 119 3.24e-21 92.8
Msa0725860 MtrunA17_Chr1g0152011 36.641 131 77 3 135 259 14 144 5.29e-21 93.6
Msa0725860 MtrunA17_Chr7g0240821 40.171 117 67 2 138 252 6 121 6.73e-21 91.3
Msa0725860 MtrunA17_Chr1g0194291 37.500 120 70 2 120 238 12 127 9.18e-21 91.7
Msa0725860 MtrunA17_Chr2g0322521 42.188 128 71 2 112 237 8 134 9.46e-21 93.6
Msa0725860 MtrunA17_Chr8g0385321 42.157 102 58 1 135 235 14 115 1.51e-20 92.0
Msa0725860 MtrunA17_Chr4g0054391 39.837 123 68 3 135 251 14 136 1.65e-20 91.3
Msa0725860 MtrunA17_Chr7g0228231 37.607 117 72 1 123 238 4 120 1.81e-20 89.4
Msa0725860 MtrunA17_Chr4g0060721 41.818 110 62 2 135 242 15 124 1.97e-20 92.0
Msa0725860 MtrunA17_Chr4g0028311 41.121 107 61 2 131 235 10 116 1.97e-20 91.7
Msa0725860 MtrunA17_Chr1g0177901 46.988 83 44 0 146 228 5 87 2.69e-20 89.0
Msa0725860 MtrunA17_Chr4g0057031 43.269 104 56 2 135 236 14 116 3.65e-20 90.1
Msa0725860 MtrunA17_Chr1g0194951 40.517 116 61 3 128 236 2 116 3.72e-20 91.7
Msa0725860 MtrunA17_Chr4g0013361 41.085 129 60 4 135 261 12 126 4.60e-20 90.1
Msa0725860 MtrunA17_Chr6g0450101 38.983 118 69 2 123 238 4 120 6.10e-20 87.8
Msa0725860 MtrunA17_Chr4g0044421 40.777 103 60 1 135 236 14 116 6.22e-20 87.4
Msa0725860 MtrunA17_Chr7g0233061 37.705 122 73 3 129 250 174 292 1.03e-19 90.1
Msa0725860 MtrunA17_Chr8g0349261 44.762 105 54 3 135 236 15 118 1.03e-19 89.4
Msa0725860 MtrunA17_Chr2g0327351 42.857 98 54 2 135 230 14 111 1.44e-19 89.4
Msa0725860 MtrunA17_Chr7g0264641 40.777 103 59 2 135 235 14 116 1.55e-19 88.2
Msa0725860 MtrunA17_Chr6g0453211 42.268 97 55 1 135 230 14 110 1.71e-19 89.0
Msa0725860 MtrunA17_Chr7g0254411 40.367 109 64 1 135 242 14 122 1.78e-19 89.4
Msa0725860 MtrunA17_Chr7g0247131 50.633 79 37 1 161 237 5 83 2.21e-19 87.8
Msa0725860 MtrunA17_Chr5g0441131 37.391 115 67 3 130 242 6 117 2.28e-19 85.5
Msa0725860 MtrunA17_Chr3g0110351 37.302 126 76 2 135 258 14 138 2.32e-19 88.6
Msa0725860 MtrunA17_Chr6g0453471 38.261 115 65 2 128 236 2 116 3.09e-19 88.6
Msa0725860 MtrunA17_Chr7g0217741 39.655 116 62 3 128 236 2 116 3.57e-19 87.8
Msa0725860 MtrunA17_Chr4g0042671 38.261 115 65 2 128 236 2 116 3.63e-19 89.0
Msa0725860 MtrunA17_Chr4g0072751 42.857 98 54 2 135 230 14 111 4.46e-19 88.2
Msa0725860 MtrunA17_Chr5g0440781 40.909 110 58 4 131 237 10 115 5.68e-19 84.7
Msa0725860 MtrunA17_Chr5g0434571 41.509 106 59 2 135 238 50 154 6.60e-19 87.8
Msa0725860 MtrunA17_Chr5g0416341 33.333 105 70 0 138 242 29 133 7.08e-19 88.6
Msa0725860 MtrunA17_Chr3g0092401 39.048 105 63 1 135 238 15 119 7.42e-19 87.0
Msa0725860 MtrunA17_Chr5g0441141 39.450 109 61 3 131 237 10 115 1.01e-18 85.9
Msa0725860 MtrunA17_Chr5g0440761 39.450 109 61 3 131 237 10 115 1.13e-18 85.5
Msa0725860 MtrunA17_Chr8g0362231 32.308 130 85 1 123 249 7 136 1.91e-18 87.0
Msa0725860 MtrunA17_Chr6g0487491 33.537 164 94 4 131 284 10 168 2.15e-18 84.7
Msa0725860 MtrunA17_Chr4g0068061 29.677 155 91 2 135 271 14 168 2.48e-18 85.9
Msa0725860 MtrunA17_Chr5g0434901 51.613 62 30 0 168 229 9 70 5.46e-18 79.7
Msa0725860 MtrunA17_Chr4g0068921 43.299 97 54 1 135 230 26 122 7.25e-18 81.6
Msa0725860 MtrunA17_Chr7g0238651 36.842 114 69 1 135 245 7 120 1.77e-17 83.6
Msa0725860 MtrunA17_Chr2g0293911 40.000 105 62 1 135 238 26 130 2.41e-17 82.8
Msa0725860 MtrunA17_Chr3g0099141 42.683 82 46 1 135 215 42 123 5.65e-16 74.7
Msa0725860 MtrunA17_Chr7g0229101 49.206 63 32 0 168 230 8 70 6.35e-16 76.3
Msa0725860 MtrunA17_Chr7g0229131 46.032 63 34 0 168 230 8 70 1.50e-14 71.6
Msa0725860 MtrunA17_Chr3g0093811 44.444 72 38 2 168 238 18 88 1.75e-14 73.6
Msa0725860 MtrunA17_Chr7g0269831 40.385 104 59 2 135 236 14 116 3.89e-14 73.6
Msa0725860 MtrunA17_Chr6g0483051 37.363 91 56 1 138 228 72 161 6.26e-14 73.9
Msa0725860 MtrunA17_Chr6g0483051 29.496 139 95 2 135 271 120 257 4.20e-12 68.2
Msa0725860 MtrunA17_Chr8g0342531 41.975 81 44 2 132 210 11 90 7.35e-14 69.3
Msa0725860 MtrunA17_Chr8g0342511 43.590 78 41 2 132 207 11 87 9.32e-14 67.0
Msa0725860 MtrunA17_Chr5g0395221 42.169 83 46 2 127 208 7 88 1.11e-13 66.6
Msa0725860 MtrunA17_Chr5g0425591 42.683 82 43 3 135 213 11 91 1.58e-13 66.2
Msa0725860 MtrunA17_Chr8g0342461 42.857 77 42 1 135 209 14 90 4.28e-13 66.6
Msa0725860 MtrunA17_Chr2g0323321 41.250 80 44 2 135 212 13 91 5.42e-13 65.5
Msa0725860 MtrunA17_Chr4g0042611 38.462 78 47 1 132 208 11 88 6.64e-13 64.3
Msa0725860 MtrunA17_Chr8g0342471 41.250 80 45 1 132 209 11 90 3.67e-12 63.9
Msa0725860 MtrunA17_Chr5g0421201 36.471 85 51 2 187 268 12 96 6.42e-12 64.3
Msa0725860 MtrunA17_Chr7g0233151 41.176 68 37 1 185 252 1 65 8.01e-12 63.5
Msa0725860 MtrunA17_Chr3g0104501 48.438 64 33 0 122 185 120 183 1.19e-11 63.9
Msa0725860 MtrunA17_Chr7g0274481 37.647 85 52 1 136 220 8 91 1.63e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0725860 AT1G69560.2 53.725 255 89 4 18 260 11 248 3.23e-80 252
Msa0725860 AT1G69560.1 54.217 249 85 4 24 260 1 232 6.20e-80 251
Msa0725860 AT1G26780.1 89.831 118 12 0 134 251 97 214 3.08e-75 237
Msa0725860 AT1G26780.2 89.831 118 12 0 134 251 97 214 1.88e-74 237
Msa0725860 AT5G17800.1 83.019 106 18 0 133 238 91 196 1.21e-61 203
Msa0725860 AT3G29020.1 73.504 117 31 0 130 246 60 176 1.62e-61 199
Msa0725860 AT3G29020.2 73.504 117 31 0 130 246 62 178 4.16e-61 201
Msa0725860 AT1G17950.1 78.704 108 23 0 133 240 3 110 7.44e-60 196
Msa0725860 AT1G73410.1 80.556 108 21 0 133 240 4 111 6.93e-57 188
Msa0725860 AT1G73410.2 80.556 108 21 0 133 240 4 111 2.07e-56 185
Msa0725860 AT4G33450.1 61.871 139 52 1 126 264 11 148 1.74e-55 184
Msa0725860 AT5G39700.1 64.486 107 38 0 136 242 57 163 4.47e-46 158
Msa0725860 AT2G39880.1 45.161 155 82 1 122 276 37 188 1.08e-38 144
Msa0725860 AT5G67300.1 57.426 101 43 0 135 235 6 106 4.85e-37 137
Msa0725860 AT3G55730.1 54.286 105 48 0 134 238 55 159 1.96e-36 138
Msa0725860 AT4G37260.1 56.436 101 44 0 135 235 13 113 2.00e-36 136
Msa0725860 AT2G23290.1 56.436 101 44 0 135 235 13 113 8.84e-36 134
Msa0725860 AT3G09230.1 54.369 103 47 0 134 236 54 156 7.25e-35 134
Msa0725860 AT3G50060.1 53.922 102 47 0 134 235 5 106 9.12e-34 129
Msa0725860 AT3G09370.1 56.436 101 44 0 135 235 130 230 3.70e-33 131
Msa0725860 AT3G09370.2 56.436 101 44 0 135 235 135 235 4.48e-33 130
Msa0725860 AT3G09370.3 56.436 101 44 0 135 235 143 243 7.99e-33 130
Msa0725860 AT5G02320.1 54.902 102 46 0 134 235 126 227 2.15e-32 129
Msa0725860 AT5G02320.2 54.902 102 46 0 134 235 126 227 2.15e-32 129
Msa0725860 AT5G02320.3 54.902 102 46 0 134 235 66 167 2.40e-32 128
Msa0725860 AT5G11510.3 49.020 102 52 0 134 235 80 181 5.48e-30 124
Msa0725860 AT5G11510.1 49.020 102 52 0 134 235 80 181 5.48e-30 124
Msa0725860 AT5G11510.4 49.020 102 52 0 134 235 80 181 5.48e-30 124
Msa0725860 AT5G11510.5 49.020 102 52 0 134 235 80 181 6.44e-30 123
Msa0725860 AT5G11510.2 49.020 102 52 0 134 235 80 181 6.45e-30 123
Msa0725860 AT5G58850.1 43.704 135 72 1 130 264 100 230 1.24e-29 120
Msa0725860 AT4G32730.5 48.544 103 53 0 134 236 86 188 1.56e-29 122
Msa0725860 AT4G32730.4 48.544 103 53 0 134 236 86 188 1.56e-29 122
Msa0725860 AT4G32730.3 48.544 103 53 0 134 236 86 188 1.56e-29 122
Msa0725860 AT4G32730.2 48.544 103 53 0 134 236 86 188 1.56e-29 122
Msa0725860 AT4G32730.1 48.544 103 53 0 134 236 86 188 1.73e-29 122
Msa0725860 AT5G11050.1 48.333 120 57 2 135 254 105 219 7.63e-29 117
Msa0725860 AT2G25230.1 46.729 107 55 2 129 234 20 125 8.56e-29 113
Msa0725860 AT3G27785.1 42.975 121 69 0 129 249 183 303 1.99e-28 117
Msa0725860 AT3G12720.1 49.091 110 53 2 132 239 21 129 1.24e-27 112
Msa0725860 AT5G40360.1 42.500 120 66 1 126 245 149 265 6.15e-27 111
Msa0725860 AT4G18770.1 39.726 146 79 2 129 265 211 356 8.58e-27 112
Msa0725860 AT5G40330.1 43.636 110 61 1 127 235 6 115 9.69e-27 107
Msa0725860 AT5G14750.1 46.078 102 54 1 135 235 18 119 1.80e-26 106
Msa0725860 AT1G79180.1 46.429 112 57 2 131 240 12 122 4.76e-26 107
Msa0725860 AT3G27920.1 41.228 114 66 1 123 235 4 117 8.75e-26 105
Msa0725860 AT3G28470.1 48.485 99 50 1 131 228 10 108 1.12e-25 107
Msa0725860 AT2G26960.1 34.737 190 115 4 121 303 8 195 1.18e-25 108
Msa0725860 AT4G28110.1 43.478 115 59 2 128 236 2 116 3.06e-25 105
Msa0725860 AT4G26930.1 42.400 125 71 1 120 243 6 130 4.45e-25 106
Msa0725860 AT4G25560.1 43.519 108 60 1 135 241 12 119 4.46e-25 104
Msa0725860 AT1G63910.1 43.697 119 66 1 132 249 11 129 6.23e-25 105
Msa0725860 AT5G54230.1 46.078 102 54 1 135 235 14 115 1.18e-24 103
Msa0725860 AT5G65230.1 47.115 104 52 2 135 236 14 116 2.32e-24 103
Msa0725860 AT3G23250.1 43.810 105 58 1 135 238 14 118 2.74e-24 102
Msa0725860 AT4G05100.1 43.478 115 58 2 128 235 2 116 3.45e-24 102
Msa0725860 AT5G10280.1 39.231 130 76 2 131 258 10 138 4.48e-24 102
Msa0725860 AT3G30210.1 39.062 128 72 3 133 258 27 150 5.84e-24 101
Msa0725860 AT3G53200.1 42.017 119 55 3 135 251 11 117 6.45e-24 100
Msa0725860 AT1G18570.1 44.340 106 58 1 135 239 15 120 7.21e-24 102
Msa0725860 AT1G09540.1 37.857 140 77 3 132 269 11 142 7.60e-24 102
Msa0725860 AT3G48920.1 46.465 99 52 1 132 229 17 115 1.05e-23 100
Msa0725860 AT3G13890.2 36.552 145 91 1 132 275 11 155 1.06e-23 102
Msa0725860 AT3G11440.2 42.342 111 63 1 128 237 36 146 1.12e-23 103
Msa0725860 AT4G01680.1 42.056 107 61 1 132 237 11 117 1.22e-23 101
Msa0725860 AT5G60890.1 42.453 106 60 1 135 239 14 119 1.46e-23 100
Msa0725860 AT4G01680.3 42.056 107 61 1 132 237 11 117 1.46e-23 99.4
Msa0725860 AT5G56110.1 45.631 103 55 1 135 236 14 116 1.51e-23 100
Msa0725860 AT2G31180.1 36.196 163 89 3 135 295 14 163 1.53e-23 99.4
Msa0725860 AT5G12870.1 40.870 115 67 1 129 242 14 128 1.54e-23 100
Msa0725860 AT1G56160.1 43.925 107 57 2 131 235 12 117 1.70e-23 100
Msa0725860 AT3G11440.3 42.342 111 63 1 128 237 36 146 1.92e-23 103
Msa0725860 AT3G11440.4 42.342 111 63 1 128 237 36 146 1.92e-23 103
Msa0725860 AT3G11440.1 42.342 111 63 1 128 237 36 146 1.92e-23 103
Msa0725860 AT3G46130.1 44.860 107 56 2 135 239 11 116 2.11e-23 99.4
Msa0725860 AT2G26950.1 42.857 105 56 2 134 237 17 118 2.64e-23 101
Msa0725860 AT5G59780.3 43.925 107 57 2 135 239 10 115 2.67e-23 98.6
Msa0725860 AT5G26660.1 42.727 110 60 2 132 239 11 119 3.26e-23 100
Msa0725860 AT3G12820.1 45.370 108 56 2 131 236 12 118 3.28e-23 98.2
Msa0725860 AT5G40430.1 40.566 106 62 1 129 234 48 152 3.67e-23 98.6
Msa0725860 AT5G52600.1 43.396 106 59 1 131 235 10 115 4.01e-23 97.1
Msa0725860 AT4G00540.2 45.794 107 55 1 135 238 103 209 5.83e-23 100
Msa0725860 AT3G13890.1 35.065 154 90 2 132 275 11 164 6.09e-23 100
Msa0725860 AT1G57560.1 41.818 110 61 2 132 239 11 119 6.21e-23 99.4
Msa0725860 AT1G57560.2 41.818 110 61 2 132 239 11 119 7.52e-23 98.2
Msa0725860 AT2G32460.1 44.144 111 59 2 135 243 20 129 9.63e-23 100
Msa0725860 AT2G32460.2 44.144 111 59 2 135 243 8 117 1.05e-22 100
Msa0725860 AT1G79180.2 37.500 144 56 2 131 240 12 155 1.17e-22 98.6
Msa0725860 AT5G14340.1 44.762 105 55 2 135 237 26 129 1.26e-22 97.4
Msa0725860 AT4G00540.1 45.794 107 55 1 135 238 101 207 1.36e-22 100
Msa0725860 AT4G00540.1 30.435 138 87 2 101 229 10 147 2.89e-11 65.5
Msa0725860 AT5G06100.1 39.370 127 69 2 119 237 11 137 1.38e-22 100
Msa0725860 AT4G38620.1 42.241 116 59 3 128 236 2 116 1.42e-22 97.4
Msa0725860 AT1G16490.1 41.964 112 62 2 131 240 12 122 1.57e-22 97.1
Msa0725860 AT5G16770.4 37.857 140 78 3 128 258 2 141 1.85e-22 98.2
Msa0725860 AT5G16770.3 37.857 140 78 3 128 258 2 141 1.85e-22 98.2
Msa0725860 AT1G06180.1 44.231 104 55 2 135 236 14 116 1.86e-22 96.3
Msa0725860 AT5G16770.1 37.857 140 78 3 128 258 2 141 2.18e-22 98.2
Msa0725860 AT5G16770.2 37.857 140 78 3 128 258 2 141 2.18e-22 98.2
Msa0725860 AT5G06100.5 39.370 127 69 2 119 237 11 137 2.69e-22 99.8
Msa0725860 AT5G06100.2 39.370 127 69 2 119 237 11 137 2.69e-22 99.8
Msa0725860 AT5G06100.3 39.370 127 69 2 119 237 11 137 2.69e-22 99.8
Msa0725860 AT5G06100.4 39.370 127 69 2 119 237 11 137 2.69e-22 99.8
Msa0725860 AT1G35515.1 39.474 114 63 2 128 235 2 115 2.71e-22 95.1
Msa0725860 AT4G01680.2 39.496 119 59 2 132 237 11 129 2.91e-22 97.8
Msa0725860 AT4G17785.2 42.017 119 66 2 122 238 2 119 3.03e-22 97.8
Msa0725860 AT4G17785.1 42.017 119 66 2 122 238 2 119 3.14e-22 97.8
Msa0725860 AT2G47190.1 39.344 122 69 2 117 237 8 125 3.34e-22 96.3
Msa0725860 AT1G74080.1 47.368 95 49 1 135 228 14 108 3.66e-22 97.4
Msa0725860 AT5G61420.2 43.396 106 59 1 135 239 14 119 4.12e-22 97.8
Msa0725860 AT1G22640.1 42.241 116 59 3 128 236 2 116 4.96e-22 95.5
Msa0725860 AT3G02940.2 42.105 114 60 2 128 235 2 115 5.98e-22 96.3
Msa0725860 AT3G02940.1 42.105 114 60 2 128 235 2 115 9.43e-22 95.9
Msa0725860 AT3G02940.3 42.105 114 60 2 128 235 2 115 9.43e-22 95.9
Msa0725860 AT4G21440.1 45.098 102 55 1 135 235 14 115 9.71e-22 96.3
Msa0725860 AT5G52260.1 46.154 104 53 2 135 236 14 116 1.03e-21 94.7
Msa0725860 AT3G13540.1 36.000 125 73 2 122 239 6 130 1.23e-21 94.0
Msa0725860 AT1G34670.1 40.870 115 62 2 128 236 2 116 1.31e-21 96.3
Msa0725860 AT5G55020.1 42.727 110 62 1 135 243 28 137 1.33e-21 97.8
Msa0725860 AT3G61250.1 41.667 132 62 4 135 263 14 133 1.36e-21 95.1
Msa0725860 AT5G62470.1 41.346 104 61 0 135 238 14 117 1.57e-21 95.9
Msa0725860 AT5G57620.1 41.121 107 61 2 131 235 10 116 2.45e-21 95.1
Msa0725860 AT4G09460.1 40.000 115 61 3 128 235 2 115 2.49e-21 92.8
Msa0725860 AT2G02820.1 36.697 109 69 0 138 246 33 141 2.55e-21 96.3
Msa0725860 AT5G23000.1 42.593 108 58 2 131 235 10 116 2.63e-21 94.7
Msa0725860 AT3G08500.1 40.179 112 66 1 127 237 24 135 2.75e-21 95.1
Msa0725860 AT2G02820.3 36.697 109 69 0 138 246 33 141 2.89e-21 94.7
Msa0725860 AT3G01140.2 41.228 114 61 2 128 235 2 115 3.10e-21 94.7
Msa0725860 AT2G02820.2 36.697 109 69 0 138 246 33 141 3.46e-21 96.3
Msa0725860 AT1G74430.1 40.566 106 62 1 135 239 14 119 3.72e-21 93.2
Msa0725860 AT3G24310.1 40.000 115 66 2 135 247 20 133 3.88e-21 93.2
Msa0725860 AT5G14750.3 50.725 69 34 0 168 236 18 86 4.38e-21 90.5
Msa0725860 AT5G07700.1 45.098 102 55 1 135 235 14 115 4.57e-21 94.4
Msa0725860 AT5G07700.2 45.098 102 55 1 135 235 14 115 4.57e-21 94.4
Msa0725860 AT3G01140.1 43.137 102 57 1 135 235 57 158 6.22e-21 94.7
Msa0725860 AT5G65790.1 38.017 121 72 3 135 252 14 134 7.03e-21 94.4
Msa0725860 AT4G34990.1 40.351 114 62 2 128 235 2 115 7.67e-21 92.4
Msa0725860 AT4G13480.1 43.810 105 56 2 135 237 8 111 8.22e-21 92.0
Msa0725860 AT5G15310.1 40.351 114 62 2 128 235 2 115 8.71e-21 93.2
Msa0725860 AT5G35550.1 37.815 119 72 2 135 251 16 134 8.92e-21 91.7
Msa0725860 AT1G18710.1 41.176 102 59 1 135 235 14 115 8.99e-21 92.0
Msa0725860 AT5G15310.2 40.351 114 62 2 128 235 2 115 9.96e-21 92.8
Msa0725860 AT5G16600.1 35.862 145 85 4 135 276 14 153 1.37e-20 92.8
Msa0725860 AT3G49690.1 42.718 103 57 2 135 235 14 116 1.41e-20 92.4
Msa0725860 AT1G25340.2 39.423 104 59 1 135 238 20 119 1.50e-20 91.7
Msa0725860 AT1G68320.1 41.509 106 59 2 135 238 21 125 1.68e-20 91.7
Msa0725860 AT1G25340.1 40.566 106 60 2 135 238 20 124 1.71e-20 91.7
Msa0725860 AT5G07690.1 43.564 101 56 1 135 234 14 114 1.80e-20 92.4
Msa0725860 AT2G16720.1 39.655 116 62 3 128 236 2 116 2.04e-20 90.9
Msa0725860 AT5G15310.4 40.351 114 62 2 128 235 2 115 2.14e-20 90.5
Msa0725860 AT3G60460.1 44.660 103 55 2 128 228 6 108 2.21e-20 91.7
Msa0725860 AT3G27810.1 41.441 111 63 2 131 240 18 127 2.59e-20 89.7
Msa0725860 AT3G47600.1 40.952 105 61 1 135 238 14 118 2.86e-20 91.7
Msa0725860 AT1G25340.3 39.423 104 59 1 135 238 20 119 2.96e-20 91.3
Msa0725860 AT1G14350.2 36.522 115 70 1 129 240 16 130 3.52e-20 92.8
Msa0725860 AT1G14350.1 36.522 115 70 1 129 240 16 130 3.52e-20 92.8
Msa0725860 AT1G08810.1 40.336 119 68 2 135 252 14 130 4.27e-20 90.5
Msa0725860 AT4G12350.1 41.346 104 58 2 135 236 14 116 5.54e-20 90.1
Msa0725860 AT5G62470.2 40.952 105 61 1 135 238 14 118 5.78e-20 91.3
Msa0725860 AT1G66370.1 34.884 129 80 3 128 254 2 128 6.43e-20 89.0
Msa0725860 AT5G40350.1 42.424 99 56 1 131 228 15 113 7.12e-20 88.2
Msa0725860 AT1G66380.1 39.091 110 66 1 128 236 3 112 1.06e-19 85.5
Msa0725860 AT3G01530.1 42.593 108 59 2 135 240 27 133 1.29e-19 87.4
Msa0725860 AT1G74650.1 41.748 103 59 1 135 236 14 116 1.66e-19 89.7
Msa0725860 AT4G22680.1 42.718 103 56 2 135 235 14 115 1.92e-19 88.2
Msa0725860 AT5G49330.1 40.777 103 60 1 135 236 14 116 2.11e-19 89.4
Msa0725860 AT3G28910.1 42.157 102 58 1 135 235 14 115 2.43e-19 89.0
Msa0725860 AT1G66230.1 41.509 106 59 2 135 238 14 118 2.72e-19 88.2
Msa0725860 AT1G48000.1 43.158 95 53 1 135 228 34 128 2.76e-19 87.4
Msa0725860 AT2G47460.1 37.500 128 76 2 135 261 14 138 3.56e-19 89.4
Msa0725860 AT3G53200.2 46.429 84 34 1 168 251 12 84 6.43e-19 85.1
Msa0725860 AT3G12820.2 52.941 68 32 0 168 235 2 69 9.58e-19 84.3
Msa0725860 AT5G26660.2 47.222 72 38 0 168 239 17 88 3.69e-18 85.5
Msa0725860 AT4G37780.1 35.652 115 71 3 135 246 14 128 3.82e-18 85.1
Msa0725860 AT5G49620.1 44.330 97 53 1 135 230 28 124 4.78e-18 85.1
Msa0725860 AT5G59780.2 48.611 72 37 0 168 239 23 94 5.26e-18 82.8
Msa0725860 AT3G18100.1 41.053 95 56 0 135 229 546 640 5.66e-18 87.0
Msa0725860 AT3G46130.3 48.611 72 37 0 168 239 13 84 6.79e-18 82.8
Msa0725860 AT3G18100.3 41.053 95 56 0 135 229 498 592 7.97e-18 86.7
Msa0725860 AT3G18100.4 41.489 94 55 0 135 228 385 478 8.47e-18 86.7
Msa0725860 AT2G36890.1 42.718 103 57 2 135 235 14 116 9.58e-18 84.0
Msa0725860 AT3G46130.4 48.611 72 37 0 168 239 23 94 9.83e-18 82.8
Msa0725860 AT3G18100.2 41.053 95 56 0 135 229 333 427 1.22e-17 85.9
Msa0725860 AT2G36890.2 42.718 103 57 2 135 235 55 157 1.45e-17 84.0
Msa0725860 AT3G06490.1 43.878 98 52 2 135 230 21 117 1.55e-17 83.6
Msa0725860 AT3G27810.2 48.000 75 38 1 168 242 7 80 2.15e-17 80.1
Msa0725860 AT1G56650.1 36.364 121 76 1 128 247 3 123 2.22e-17 82.0
Msa0725860 AT3G62610.1 38.835 103 62 1 135 236 14 116 2.62e-17 83.2
Msa0725860 AT5G35550.2 43.529 85 47 1 168 251 53 137 4.07e-17 81.3
Msa0725860 AT5G40350.2 52.459 61 29 0 168 228 8 68 7.14e-17 78.6
Msa0725860 AT5G62320.1 41.441 111 55 3 135 236 15 124 7.63e-17 80.1
Msa0725860 AT1G66390.1 38.182 110 67 1 128 236 3 112 2.38e-16 79.0
Msa0725860 AT3G47600.2 46.479 71 38 0 168 238 42 112 1.33e-15 78.2
Msa0725860 AT2G37630.1 35.088 114 71 1 135 245 4 117 1.63e-15 78.2
Msa0725860 AT5G49620.2 36.134 119 61 2 135 238 28 146 6.99e-15 75.9
Msa0725860 AT1G66380.3 46.377 69 37 0 168 236 11 79 1.25e-14 70.1
Msa0725860 AT5G14750.4 44.828 58 32 0 178 235 1 58 8.79e-14 68.9
Msa0725860 AT5G14750.2 44.828 58 32 0 178 235 1 58 8.79e-14 68.9
Msa0725860 AT1G71030.2 40.909 66 39 0 171 236 5 70 1.33e-13 69.3
Msa0725860 AT1G71030.1 40.909 66 39 0 171 236 19 84 1.50e-13 69.7
Msa0725860 AT3G23250.2 44.262 61 34 0 178 238 1 61 1.04e-12 67.8
Msa0725860 AT1G22640.3 47.458 59 31 0 178 236 1 59 1.19e-12 67.0
Msa0725860 AT1G09770.1 37.647 85 52 1 136 220 8 91 4.58e-11 65.5

Find 99 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAACTTGTTGCTCTTTA+TGG 0.055543 5_1:-25761129 Msa0725860:CDS
ATGCAAGCACATAGAATTTA+TGG 0.155271 5_1:-25760549 Msa0725860:CDS
CCATTCTGCTGTAAACATTT+TGG 0.171567 5_1:+25760397 None:intergenic
GTTATGTTCTTCATATCTTT+TGG 0.231970 5_1:+25761344 None:intergenic
ACAGCATTGTCTGTTCTTCC+TGG 0.232685 5_1:+25760495 None:intergenic
CATTGAAGTTAGTGTTATTA+TGG 0.235907 5_1:+25761253 None:intergenic
CCTCTTTGCCACTTCCATTA+GGG 0.244007 5_1:+25761217 None:intergenic
TGGAGGGAAAAGGTTCTTAT+TGG 0.252461 5_1:-25761308 Msa0725860:CDS
GAAAGACACTCACTCATAAA+TGG 0.267252 5_1:+25761366 None:intergenic
CTCCATCACAAAGCTCTTAT+AGG 0.282673 5_1:+25761404 None:intergenic
AATGCCCTTCTGTTGATTCT+TGG 0.283524 5_1:+25760597 None:intergenic
ACCATATGCATAGAAGAAAT+TGG 0.284854 5_1:+25761510 None:intergenic
CTCTTTATGGTCCTCAAAAC+TGG 0.287586 5_1:-25761116 Msa0725860:CDS
TCCAATTTCTTCTATGCATA+TGG 0.290509 5_1:-25761511 Msa0725860:CDS
TCCTCTTTGCCACTTCCATT+AGG 0.312075 5_1:+25761216 None:intergenic
AAATCACTGGCATGTTATAA+TGG 0.323655 5_1:-25760469 Msa0725860:CDS
AGAAGTAGCATATGGGAAAA+TGG 0.333027 5_1:+25760275 None:intergenic
CTCTCTATCAACACAAACTA+TGG 0.336963 5_1:-25761468 Msa0725860:CDS
TGAGGAGTTTCAACAGCATC+TGG 0.344189 5_1:+25759181 None:intergenic
ACATAACATGGAGGATGATA+TGG 0.368084 5_1:-25761328 Msa0725860:CDS
TGTTGATTCTTGGATCCAAT+TGG 0.373955 5_1:+25760607 None:intergenic
CATTCAATCAGATCAGATAC+TGG 0.376946 5_1:-25759387 Msa0725860:CDS
AGCAACAAGTTCTTTAAGCT+TGG 0.378116 5_1:+25761137 None:intergenic
CCTGGTGGTAGGGTTGAGTA+TGG 0.380559 5_1:-25760237 Msa0725860:CDS
GGGGCTCCATTGAGAAAATA+AGG 0.387825 5_1:+25760315 None:intergenic
AAGTCTCTCTTCCTCTTCTT+CGG 0.405434 5_1:+25760572 None:intergenic
TATGCGAAGGCAAGAGTTGT+AGG 0.412480 5_1:-25760644 Msa0725860:intron
TCTTTCCAACATTGTGCTCC+TGG 0.414555 5_1:-25760255 Msa0725860:CDS
GCTAAGATGGTTCAACCAAT+TGG 0.427019 5_1:-25760622 Msa0725860:CDS
TGTTGGAAAGAAGTAGCATA+TGG 0.427053 5_1:+25760267 None:intergenic
CAGCATTGTCTGTTCTTCCT+GGG 0.428369 5_1:+25760496 None:intergenic
ATAGAATTTATGGAAACAAA+TGG 0.443806 5_1:-25760539 Msa0725860:CDS
TCTTCTTCTCCTGTATGCAC+TGG 0.451134 5_1:+25760425 None:intergenic
GTGTCTCTGCGGCCAAAGCT+TGG 0.455340 5_1:+25760366 None:intergenic
ATGGAGCAAAATCCAAGCTT+TGG 0.457109 5_1:-25760378 Msa0725860:CDS
GCAAGAGTTGTAGGCTAAGA+TGG 0.469016 5_1:-25760635 Msa0725860:CDS
TTTCTCAATGGAGCCCCACT+TGG 0.471962 5_1:-25760309 Msa0725860:CDS
AACATTGTGCTCCTGGTGGT+AGG 0.477047 5_1:-25760248 Msa0725860:CDS
AGTGGCAAAGAGGAAGATAA+TGG 0.477427 5_1:-25761207 Msa0725860:CDS
GATGAGTTAGAGAACCCTAA+TGG 0.489473 5_1:-25761231 Msa0725860:CDS
TTAAGCTTGGAATCTTCAGC+AGG 0.491648 5_1:+25761150 None:intergenic
CAGTATCTGATCTGATTGAA+TGG 0.492098 5_1:+25759388 None:intergenic
GAATCTTATAGCTGAAAAGT+TGG 0.494696 5_1:-25761094 Msa0725860:CDS
AAGAGCTTTGTGATGGAGAA+TGG 0.496350 5_1:-25761399 Msa0725860:CDS
GAAAAGTTGGAAGGAAGATC+AGG 0.498813 5_1:-25761081 Msa0725860:intron
GGTTCTTATTGGAGTGAGGA+AGG 0.499259 5_1:-25761297 Msa0725860:CDS
TAGAATTTATGGAAACAAAT+GGG 0.516486 5_1:-25760538 Msa0725860:CDS
AGCATACAAACCAACATGTA+GGG 0.516701 5_1:+25760164 None:intergenic
TGATTCTGTTTCCATTGTTG+TGG 0.518322 5_1:+25760344 None:intergenic
GTAAATGTGCAAGAGGGCAT+TGG 0.525006 5_1:-25761176 Msa0725860:CDS
AAAAGGTTCTTATTGGAGTG+AGG 0.527759 5_1:-25761301 Msa0725860:CDS
GAGGAGTTTCAACAGCATCT+GGG 0.530438 5_1:+25759182 None:intergenic
CCAAAATGTTTACAGCAGAA+TGG 0.535209 5_1:-25760397 Msa0725860:CDS
GAGGATGATATGGAGGGAAA+AGG 0.539017 5_1:-25761318 Msa0725860:CDS
TCAGCAACATATCATAATGC+AGG 0.546403 5_1:-25759235 Msa0725860:CDS
GAGAACAATCCAGTGCATAC+AGG 0.549261 5_1:-25760434 Msa0725860:CDS
AATATTGTTGAGGATAATGA+TGG 0.551677 5_1:+25759317 None:intergenic
ACACCAGAGAAGTAATCAAA+AGG 0.553846 5_1:+25760132 None:intergenic
TACCACCAGGAGCACAATGT+TGG 0.555354 5_1:+25760250 None:intergenic
GAGCATACAAACCAACATGT+AGG 0.558851 5_1:+25760163 None:intergenic
ACATTGTGCTCCTGGTGGTA+GGG 0.559580 5_1:-25760247 Msa0725860:CDS
TTAGAGAACCCTAATGGAAG+TGG 0.562159 5_1:-25761225 Msa0725860:CDS
TTCTCAATGGAGCCCCACTT+GGG 0.562639 5_1:-25760308 Msa0725860:CDS
AAGGGCATTTACCGAAGAAG+AGG 0.564024 5_1:-25760583 Msa0725860:CDS
AATGTGCAAGAGGGCATTGG+AGG 0.567448 5_1:-25761173 Msa0725860:CDS
TGCCTATAAGAGCTTTGTGA+TGG 0.572832 5_1:-25761406 Msa0725860:CDS
CTTATAGCTGAAAAGTTGGA+AGG 0.575448 5_1:-25761090 Msa0725860:CDS
GTTGGAAAGAAGTAGCATAT+GGG 0.582719 5_1:+25760268 None:intergenic
CAGTCTAGTAAATGTGCAAG+AGG 0.591655 5_1:-25761183 Msa0725860:CDS
CCCTAATGGAAGTGGCAAAG+AGG 0.591951 5_1:-25761217 Msa0725860:CDS
AGGAGTTTCAACAGCATCTG+GGG 0.596052 5_1:+25759183 None:intergenic
TGGATCCAAGAATCAACAGA+AGG 0.596555 5_1:-25760602 Msa0725860:CDS
ATGATAGCAAGACTCTTCCC+AGG 0.599617 5_1:-25760513 Msa0725860:CDS
TAACATGGAGGATGATATGG+AGG 0.601137 5_1:-25761325 Msa0725860:CDS
TTCCAACATTGTGCTCCTGG+TGG 0.602452 5_1:-25760252 Msa0725860:CDS
ATGCAAGGACCCCTACATGT+TGG 0.603281 5_1:-25760174 Msa0725860:CDS
AAGATATGAAGAACATAACA+TGG 0.607365 5_1:-25761340 Msa0725860:CDS
CCGCAGAGACACCACAACAA+TGG 0.610250 5_1:-25760355 Msa0725860:CDS
ATCATGTAGCACCTACTCCA+AGG 0.615109 5_1:+25759146 None:intergenic
TGGACACACTATTCCCAAGT+GGG 0.619688 5_1:+25760295 None:intergenic
CCATACTCAACCCTACCACC+AGG 0.621029 5_1:+25760237 None:intergenic
TTTGTCATCAAATATTGTTG+AGG 0.625193 5_1:+25759307 None:intergenic
GGATCCAAGAATCAACAGAA+GGG 0.629646 5_1:-25760601 Msa0725860:CDS
ATTCAATCAGATCAGATACT+GGG 0.636557 5_1:-25759386 Msa0725860:CDS
GGTGAGAGAGAAGCTATGCA+AGG 0.639165 5_1:-25760189 Msa0725860:CDS
AATCAGATCAGATACTGGGA+TGG 0.649755 5_1:-25759382 Msa0725860:CDS
CATATGGTATATGCAGACCT+CGG 0.662674 5_1:-25761495 Msa0725860:CDS
TCTCTCTCACCACTCATGTG+AGG 0.664807 5_1:+25760201 None:intergenic
CCATTGTTGTGGTGTCTCTG+CGG 0.666871 5_1:+25760355 None:intergenic
GCATACAAACCAACATGTAG+GGG 0.687045 5_1:+25760165 None:intergenic
TGGTAGAAGCAATGACATGG+TGG 0.688499 5_1:-25759416 Msa0725860:CDS
AGTCTAGTAAATGTGCAAGA+GGG 0.697348 5_1:-25761182 Msa0725860:CDS
ATGGACACACTATTCCCAAG+TGG 0.700526 5_1:+25760294 None:intergenic
GGACACACTATTCCCAAGTG+GGG 0.700541 5_1:+25760296 None:intergenic
AACATGGAGGATGATATGGA+GGG 0.709417 5_1:-25761324 Msa0725860:CDS
TGTTGATAGAGAGAGATCCG+AGG 0.713854 5_1:+25761478 None:intergenic
GCTCCATTGAGAAAATAAGG+TGG 0.743341 5_1:+25760318 None:intergenic
AGTTGGTAGAAGCAATGACA+TGG 0.754945 5_1:-25759419 Msa0725860:CDS
ATATGAAGAACATAACATGG+AGG 0.760988 5_1:-25761337 Msa0725860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTCATATAGTTTTAAATTT+CGG - chr5_1:25759930-25759949 Msa0725860:intron 15.0%
!! AAATCAATTTATAAAAACCA+TGG + chr5_1:25760665-25760684 None:intergenic 15.0%
!!! GTTTTTATAAATTGATTTTG+TGG - chr5_1:25760667-25760686 Msa0725860:intron 15.0%
!!! ATCATTTTTCTATTTTCTAT+AGG - chr5_1:25761042-25761061 Msa0725860:intron 15.0%
!! TCCTATTAATTAACATAATT+TGG - chr5_1:25761262-25761281 Msa0725860:CDS 15.0%
!! ACCAAATTATGTTAATTAAT+AGG + chr5_1:25761266-25761285 None:intergenic 15.0%
!!! GTTCATATAGTTTTAAATTT+CGG - chr5_1:25759930-25759949 Msa0725860:intron 15.0%
!! AAATCAATTTATAAAAACCA+TGG + chr5_1:25760665-25760684 None:intergenic 15.0%
!!! GTTTTTATAAATTGATTTTG+TGG - chr5_1:25760667-25760686 Msa0725860:intron 15.0%
!!! ATCATTTTTCTATTTTCTAT+AGG - chr5_1:25761042-25761061 Msa0725860:intron 15.0%
!! TCCTATTAATTAACATAATT+TGG - chr5_1:25761262-25761281 Msa0725860:CDS 15.0%
!! ACCAAATTATGTTAATTAAT+AGG + chr5_1:25761266-25761285 None:intergenic 15.0%
!! TTTGAAGAGATGTATATATT+TGG - chr5_1:25760012-25760031 Msa0725860:intron 20.0%
!!! TTTTTTTTTTTTGTATGCGA+AGG - chr5_1:25760057-25760076 Msa0725860:intron 20.0%
!! ATAGAATTTATGGAAACAAA+TGG - chr5_1:25760175-25760194 Msa0725860:CDS 20.0%
!! TAGAATTTATGGAAACAAAT+GGG - chr5_1:25760176-25760195 Msa0725860:CDS 20.0%
!!! AATTTGGTTTAATTTGAAGT+TGG - chr5_1:25761278-25761297 Msa0725860:CDS 20.0%
!! TTTGAAGAGATGTATATATT+TGG - chr5_1:25760012-25760031 Msa0725860:intron 20.0%
!!! TTTTTTTTTTTTGTATGCGA+AGG - chr5_1:25760057-25760076 Msa0725860:intron 20.0%
!! ATAGAATTTATGGAAACAAA+TGG - chr5_1:25760175-25760194 Msa0725860:CDS 20.0%
!! TAGAATTTATGGAAACAAAT+GGG - chr5_1:25760176-25760195 Msa0725860:CDS 20.0%
!!! AATTTGGTTTAATTTGAAGT+TGG - chr5_1:25761278-25761297 Msa0725860:CDS 20.0%
! AAAAAGAAGAAGAAAGAGAT+TGG + chr5_1:25759179-25759198 None:intergenic 25.0%
!! GTTATGTTCTTCATATCTTT+TGG + chr5_1:25759373-25759392 None:intergenic 25.0%
! AAGATATGAAGAACATAACA+TGG - chr5_1:25759374-25759393 Msa0725860:CDS 25.0%
!! CATTGAAGTTAGTGTTATTA+TGG + chr5_1:25759464-25759483 None:intergenic 25.0%
! ATCATGTATGTTTGAATTGA+CGG - chr5_1:25759713-25759732 Msa0725860:intron 25.0%
!!! ATAAATTGATTTTGTGGTCA+CGG - chr5_1:25760673-25760692 Msa0725860:intron 25.0%
!! AATGTTCTAAATTGCAATCA+CGG + chr5_1:25760764-25760783 None:intergenic 25.0%
! GTTTACACACAAAAAAAACT+AGG + chr5_1:25760817-25760836 None:intergenic 25.0%
!!! AGTTTTTTTTGTGTGTAAAC+TGG - chr5_1:25760817-25760836 Msa0725860:intron 25.0%
!!! GTTTTTTTTGTGTGTAAACT+GGG - chr5_1:25760818-25760837 Msa0725860:intron 25.0%
! ATTTCAAAGACCTAATATTG+TGG + chr5_1:25761116-25761135 None:intergenic 25.0%
! CTCTGCAACAATATAAAAAT+TGG - chr5_1:25761136-25761155 Msa0725860:CDS 25.0%
! TATGTGTGACAAATAATGAA+GGG + chr5_1:25761212-25761231 None:intergenic 25.0%
! ATATGTGTGACAAATAATGA+AGG + chr5_1:25761213-25761232 None:intergenic 25.0%
! AATATTGTTGAGGATAATGA+TGG + chr5_1:25761400-25761419 None:intergenic 25.0%
! TTTGTCATCAAATATTGTTG+AGG + chr5_1:25761410-25761429 None:intergenic 25.0%
! AAAAAGAAGAAGAAAGAGAT+TGG + chr5_1:25759179-25759198 None:intergenic 25.0%
!! GTTATGTTCTTCATATCTTT+TGG + chr5_1:25759373-25759392 None:intergenic 25.0%
! AAGATATGAAGAACATAACA+TGG - chr5_1:25759374-25759393 Msa0725860:CDS 25.0%
!! CATTGAAGTTAGTGTTATTA+TGG + chr5_1:25759464-25759483 None:intergenic 25.0%
! ATCATGTATGTTTGAATTGA+CGG - chr5_1:25759713-25759732 Msa0725860:intron 25.0%
!!! ATAAATTGATTTTGTGGTCA+CGG - chr5_1:25760673-25760692 Msa0725860:intron 25.0%
!! AATGTTCTAAATTGCAATCA+CGG + chr5_1:25760764-25760783 None:intergenic 25.0%
! GTTTACACACAAAAAAAACT+AGG + chr5_1:25760817-25760836 None:intergenic 25.0%
!!! AGTTTTTTTTGTGTGTAAAC+TGG - chr5_1:25760817-25760836 Msa0725860:intron 25.0%
!!! GTTTTTTTTGTGTGTAAACT+GGG - chr5_1:25760818-25760837 Msa0725860:intron 25.0%
! ATTTCAAAGACCTAATATTG+TGG + chr5_1:25761116-25761135 None:intergenic 25.0%
! CTCTGCAACAATATAAAAAT+TGG - chr5_1:25761136-25761155 Msa0725860:CDS 25.0%
! TATGTGTGACAAATAATGAA+GGG + chr5_1:25761212-25761231 None:intergenic 25.0%
! ATATGTGTGACAAATAATGA+AGG + chr5_1:25761213-25761232 None:intergenic 25.0%
! AATATTGTTGAGGATAATGA+TGG + chr5_1:25761400-25761419 None:intergenic 25.0%
! TTTGTCATCAAATATTGTTG+AGG + chr5_1:25761410-25761429 None:intergenic 25.0%
TCCAATTTCTTCTATGCATA+TGG - chr5_1:25759203-25759222 Msa0725860:CDS 30.0%
ACCATATGCATAGAAGAAAT+TGG + chr5_1:25759207-25759226 None:intergenic 30.0%
ATATGAAGAACATAACATGG+AGG - chr5_1:25759377-25759396 Msa0725860:CDS 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr5_1:25759585-25759604 Msa0725860:intron 30.0%
GAATCTTATAGCTGAAAAGT+TGG - chr5_1:25759620-25759639 Msa0725860:intron 30.0%
! ACGGTATGTTATTGTGATTT+TGG - chr5_1:25759748-25759767 Msa0725860:intron 30.0%
ATGCAAGCACATAGAATTTA+TGG - chr5_1:25760165-25760184 Msa0725860:CDS 30.0%
AAATCACTGGCATGTTATAA+TGG - chr5_1:25760245-25760264 Msa0725860:CDS 30.0%
! GTGATTGCAATTTAGAACAT+TGG - chr5_1:25760763-25760782 Msa0725860:intron 30.0%
! CTAGGTTTGAATTCAGTTTT+GGG + chr5_1:25760940-25760959 None:intergenic 30.0%
GATAGTATGTTGAATCAACT+AGG + chr5_1:25761025-25761044 None:intergenic 30.0%
ATTCAATCAGATCAGATACT+GGG - chr5_1:25761328-25761347 Msa0725860:CDS 30.0%
TCCAATTTCTTCTATGCATA+TGG - chr5_1:25759203-25759222 Msa0725860:CDS 30.0%
ACCATATGCATAGAAGAAAT+TGG + chr5_1:25759207-25759226 None:intergenic 30.0%
ATATGAAGAACATAACATGG+AGG - chr5_1:25759377-25759396 Msa0725860:CDS 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr5_1:25759585-25759604 Msa0725860:intron 30.0%
GAATCTTATAGCTGAAAAGT+TGG - chr5_1:25759620-25759639 Msa0725860:intron 30.0%
! ACGGTATGTTATTGTGATTT+TGG - chr5_1:25759748-25759767 Msa0725860:intron 30.0%
ATGCAAGCACATAGAATTTA+TGG - chr5_1:25760165-25760184 Msa0725860:CDS 30.0%
AAATCACTGGCATGTTATAA+TGG - chr5_1:25760245-25760264 Msa0725860:CDS 30.0%
! GTGATTGCAATTTAGAACAT+TGG - chr5_1:25760763-25760782 Msa0725860:intron 30.0%
! CTAGGTTTGAATTCAGTTTT+GGG + chr5_1:25760940-25760959 None:intergenic 30.0%
GATAGTATGTTGAATCAACT+AGG + chr5_1:25761025-25761044 None:intergenic 30.0%
ATTCAATCAGATCAGATACT+GGG - chr5_1:25761328-25761347 Msa0725860:CDS 30.0%
CTCTCTATCAACACAAACTA+TGG - chr5_1:25759246-25759265 Msa0725860:CDS 35.0%
GAAAGACACTCACTCATAAA+TGG + chr5_1:25759351-25759370 None:intergenic 35.0%
ACATAACATGGAGGATGATA+TGG - chr5_1:25759386-25759405 Msa0725860:CDS 35.0%
AAAAGGTTCTTATTGGAGTG+AGG - chr5_1:25759413-25759432 Msa0725860:CDS 35.0%
AGTCTAGTAAATGTGCAAGA+GGG - chr5_1:25759532-25759551 Msa0725860:intron 35.0%
AGCAACAAGTTCTTTAAGCT+TGG + chr5_1:25759580-25759599 None:intergenic 35.0%
! GCTATAAGATTCCAGTTTTG+AGG + chr5_1:25759612-25759631 None:intergenic 35.0%
CTTATAGCTGAAAAGTTGGA+AGG - chr5_1:25759624-25759643 Msa0725860:intron 35.0%
TTTGAATTGACGGTGACTTT+GGG - chr5_1:25759723-25759742 Msa0725860:intron 35.0%
!! TGTTGATTCTTGGATCCAAT+TGG + chr5_1:25760110-25760129 None:intergenic 35.0%
ACAATGCTGTGAAAAATCAC+TGG - chr5_1:25760232-25760251 Msa0725860:CDS 35.0%
! CCATTCTGCTGTAAACATTT+TGG + chr5_1:25760320-25760339 None:intergenic 35.0%
CCAAAATGTTTACAGCAGAA+TGG - chr5_1:25760317-25760336 Msa0725860:CDS 35.0%
TGATTCTGTTTCCATTGTTG+TGG + chr5_1:25760373-25760392 None:intergenic 35.0%
!!! TCACCACCTTATTTTCTCAA+TGG - chr5_1:25760393-25760412 Msa0725860:CDS 35.0%
AGAAGTAGCATATGGGAAAA+TGG + chr5_1:25760442-25760461 None:intergenic 35.0%
GTTGGAAAGAAGTAGCATAT+GGG + chr5_1:25760449-25760468 None:intergenic 35.0%
TGTTGGAAAGAAGTAGCATA+TGG + chr5_1:25760450-25760469 None:intergenic 35.0%
! AATGTTTTACCTCACATGAG+TGG - chr5_1:25760504-25760523 Msa0725860:CDS 35.0%
AGCATACAAACCAACATGTA+GGG + chr5_1:25760553-25760572 None:intergenic 35.0%
ACACCAGAGAAGTAATCAAA+AGG + chr5_1:25760585-25760604 None:intergenic 35.0%
TATGAAGTGGCAAAAAGAGA+AGG + chr5_1:25760627-25760646 None:intergenic 35.0%
! TTGCCACTTCATATTCTTGT+AGG - chr5_1:25760634-25760653 Msa0725860:CDS 35.0%
TCTCCTACAAGAATATGAAG+TGG + chr5_1:25760640-25760659 None:intergenic 35.0%
! CCTAGGTTTGAATTCAGTTT+TGG + chr5_1:25760941-25760960 None:intergenic 35.0%
CCAAAACTGAATTCAAACCT+AGG - chr5_1:25760938-25760957 Msa0725860:intron 35.0%
! TCTAGCTTAACTAAGTTCCT+AGG + chr5_1:25760958-25760977 None:intergenic 35.0%
CAGTATCTGATCTGATTGAA+TGG + chr5_1:25761329-25761348 None:intergenic 35.0%
CATTCAATCAGATCAGATAC+TGG - chr5_1:25761327-25761346 Msa0725860:CDS 35.0%
TCAGCAACATATCATAATGC+AGG - chr5_1:25761479-25761498 Msa0725860:CDS 35.0%
CCAAGGAAGTCAAAAAATTG+AGG + chr5_1:25761554-25761573 None:intergenic 35.0%
!!! CCTCAATTTTTTGACTTCCT+TGG - chr5_1:25761551-25761570 Msa0725860:CDS 35.0%
!!! TTTTTTGACTTCCTTGGAGT+AGG - chr5_1:25761557-25761576 Msa0725860:CDS 35.0%
CTCTCTATCAACACAAACTA+TGG - chr5_1:25759246-25759265 Msa0725860:CDS 35.0%
GAAAGACACTCACTCATAAA+TGG + chr5_1:25759351-25759370 None:intergenic 35.0%
ACATAACATGGAGGATGATA+TGG - chr5_1:25759386-25759405 Msa0725860:CDS 35.0%
AAAAGGTTCTTATTGGAGTG+AGG - chr5_1:25759413-25759432 Msa0725860:CDS 35.0%
AGTCTAGTAAATGTGCAAGA+GGG - chr5_1:25759532-25759551 Msa0725860:intron 35.0%
AGCAACAAGTTCTTTAAGCT+TGG + chr5_1:25759580-25759599 None:intergenic 35.0%
! GCTATAAGATTCCAGTTTTG+AGG + chr5_1:25759612-25759631 None:intergenic 35.0%
CTTATAGCTGAAAAGTTGGA+AGG - chr5_1:25759624-25759643 Msa0725860:intron 35.0%
TTTGAATTGACGGTGACTTT+GGG - chr5_1:25759723-25759742 Msa0725860:intron 35.0%
!! TGTTGATTCTTGGATCCAAT+TGG + chr5_1:25760110-25760129 None:intergenic 35.0%
ACAATGCTGTGAAAAATCAC+TGG - chr5_1:25760232-25760251 Msa0725860:CDS 35.0%
! CCATTCTGCTGTAAACATTT+TGG + chr5_1:25760320-25760339 None:intergenic 35.0%
CCAAAATGTTTACAGCAGAA+TGG - chr5_1:25760317-25760336 Msa0725860:CDS 35.0%
TGATTCTGTTTCCATTGTTG+TGG + chr5_1:25760373-25760392 None:intergenic 35.0%
!!! TCACCACCTTATTTTCTCAA+TGG - chr5_1:25760393-25760412 Msa0725860:CDS 35.0%
AGAAGTAGCATATGGGAAAA+TGG + chr5_1:25760442-25760461 None:intergenic 35.0%
GTTGGAAAGAAGTAGCATAT+GGG + chr5_1:25760449-25760468 None:intergenic 35.0%
TGTTGGAAAGAAGTAGCATA+TGG + chr5_1:25760450-25760469 None:intergenic 35.0%
! AATGTTTTACCTCACATGAG+TGG - chr5_1:25760504-25760523 Msa0725860:CDS 35.0%
AGCATACAAACCAACATGTA+GGG + chr5_1:25760553-25760572 None:intergenic 35.0%
ACACCAGAGAAGTAATCAAA+AGG + chr5_1:25760585-25760604 None:intergenic 35.0%
TATGAAGTGGCAAAAAGAGA+AGG + chr5_1:25760627-25760646 None:intergenic 35.0%
! TTGCCACTTCATATTCTTGT+AGG - chr5_1:25760634-25760653 Msa0725860:CDS 35.0%
TCTCCTACAAGAATATGAAG+TGG + chr5_1:25760640-25760659 None:intergenic 35.0%
! CCTAGGTTTGAATTCAGTTT+TGG + chr5_1:25760941-25760960 None:intergenic 35.0%
CCAAAACTGAATTCAAACCT+AGG - chr5_1:25760938-25760957 Msa0725860:intron 35.0%
! TCTAGCTTAACTAAGTTCCT+AGG + chr5_1:25760958-25760977 None:intergenic 35.0%
CAGTATCTGATCTGATTGAA+TGG + chr5_1:25761329-25761348 None:intergenic 35.0%
CATTCAATCAGATCAGATAC+TGG - chr5_1:25761327-25761346 Msa0725860:CDS 35.0%
TCAGCAACATATCATAATGC+AGG - chr5_1:25761479-25761498 Msa0725860:CDS 35.0%
CCAAGGAAGTCAAAAAATTG+AGG + chr5_1:25761554-25761573 None:intergenic 35.0%
!!! CCTCAATTTTTTGACTTCCT+TGG - chr5_1:25761551-25761570 Msa0725860:CDS 35.0%
!!! TTTTTTGACTTCCTTGGAGT+AGG - chr5_1:25761557-25761576 Msa0725860:CDS 35.0%
CATATGGTATATGCAGACCT+CGG - chr5_1:25759219-25759238 Msa0725860:CDS 40.0%
! TGCCTATAAGAGCTTTGTGA+TGG - chr5_1:25759308-25759327 Msa0725860:CDS 40.0%
CTCCATCACAAAGCTCTTAT+AGG + chr5_1:25759313-25759332 None:intergenic 40.0%
! AAGAGCTTTGTGATGGAGAA+TGG - chr5_1:25759315-25759334 Msa0725860:CDS 40.0%
TAACATGGAGGATGATATGG+AGG - chr5_1:25759389-25759408 Msa0725860:CDS 40.0%
AACATGGAGGATGATATGGA+GGG - chr5_1:25759390-25759409 Msa0725860:CDS 40.0%
TGGAGGGAAAAGGTTCTTAT+TGG - chr5_1:25759406-25759425 Msa0725860:CDS 40.0%
GATGAGTTAGAGAACCCTAA+TGG - chr5_1:25759483-25759502 Msa0725860:intron 40.0%
TTAGAGAACCCTAATGGAAG+TGG - chr5_1:25759489-25759508 Msa0725860:intron 40.0%
AGTGGCAAAGAGGAAGATAA+TGG - chr5_1:25759507-25759526 Msa0725860:intron 40.0%
CAGTCTAGTAAATGTGCAAG+AGG - chr5_1:25759531-25759550 Msa0725860:intron 40.0%
TTAAGCTTGGAATCTTCAGC+AGG + chr5_1:25759567-25759586 None:intergenic 40.0%
CTCTTTATGGTCCTCAAAAC+TGG - chr5_1:25759598-25759617 Msa0725860:intron 40.0%
GAAAAGTTGGAAGGAAGATC+AGG - chr5_1:25759633-25759652 Msa0725860:intron 40.0%
GTTTGAATTGACGGTGACTT+TGG - chr5_1:25759722-25759741 Msa0725860:intron 40.0%
AACAAGATTGTGAGCATGCT+TGG + chr5_1:25759839-25759858 None:intergenic 40.0%
GCTAAGATGGTTCAACCAAT+TGG - chr5_1:25760092-25760111 Msa0725860:intron 40.0%
TGGATCCAAGAATCAACAGA+AGG - chr5_1:25760112-25760131 Msa0725860:intron 40.0%
GGATCCAAGAATCAACAGAA+GGG - chr5_1:25760113-25760132 Msa0725860:intron 40.0%
!! AATGCCCTTCTGTTGATTCT+TGG + chr5_1:25760120-25760139 None:intergenic 40.0%
AAGTCTCTCTTCCTCTTCTT+CGG + chr5_1:25760145-25760164 None:intergenic 40.0%
ATGGAGCAAAATCCAAGCTT+TGG - chr5_1:25760336-25760355 Msa0725860:CDS 40.0%
GCTCCATTGAGAAAATAAGG+TGG + chr5_1:25760399-25760418 None:intergenic 40.0%
GCATACAAACCAACATGTAG+GGG + chr5_1:25760552-25760571 None:intergenic 40.0%
GAGCATACAAACCAACATGT+AGG + chr5_1:25760554-25760573 None:intergenic 40.0%
!! GCACCTTTTGATTACTTCTC+TGG - chr5_1:25760579-25760598 Msa0725860:CDS 40.0%
TATTCTTGTAGGAGACACCA+TGG - chr5_1:25760645-25760664 Msa0725860:intron 40.0%
! ACTAATCCCTCGAGTATTGT+GGG - chr5_1:25760865-25760884 Msa0725860:intron 40.0%
! GAGTATTGTGGGACTCAAAT+GGG - chr5_1:25760876-25760895 Msa0725860:intron 40.0%
CAGCAGCGTTAAAACTCTTT+GGG + chr5_1:25760913-25760932 None:intergenic 40.0%
TTGCTTAGATGAGATGGAAC+AGG + chr5_1:25760986-25761005 None:intergenic 40.0%
CCAAGATTGCTTAGATGAGA+TGG + chr5_1:25760992-25761011 None:intergenic 40.0%
CCATCTCATCTAAGCAATCT+TGG - chr5_1:25760989-25761008 Msa0725860:intron 40.0%
!! AGTTGGTAGAAGCAATGACA+TGG - chr5_1:25761295-25761314 Msa0725860:CDS 40.0%
AATCAGATCAGATACTGGGA+TGG - chr5_1:25761332-25761351 Msa0725860:CDS 40.0%
CATATGGTATATGCAGACCT+CGG - chr5_1:25759219-25759238 Msa0725860:CDS 40.0%
! TGCCTATAAGAGCTTTGTGA+TGG - chr5_1:25759308-25759327 Msa0725860:CDS 40.0%
CTCCATCACAAAGCTCTTAT+AGG + chr5_1:25759313-25759332 None:intergenic 40.0%
! AAGAGCTTTGTGATGGAGAA+TGG - chr5_1:25759315-25759334 Msa0725860:CDS 40.0%
TAACATGGAGGATGATATGG+AGG - chr5_1:25759389-25759408 Msa0725860:CDS 40.0%
AACATGGAGGATGATATGGA+GGG - chr5_1:25759390-25759409 Msa0725860:CDS 40.0%
TGGAGGGAAAAGGTTCTTAT+TGG - chr5_1:25759406-25759425 Msa0725860:CDS 40.0%
GATGAGTTAGAGAACCCTAA+TGG - chr5_1:25759483-25759502 Msa0725860:intron 40.0%
TTAGAGAACCCTAATGGAAG+TGG - chr5_1:25759489-25759508 Msa0725860:intron 40.0%
AGTGGCAAAGAGGAAGATAA+TGG - chr5_1:25759507-25759526 Msa0725860:intron 40.0%
CAGTCTAGTAAATGTGCAAG+AGG - chr5_1:25759531-25759550 Msa0725860:intron 40.0%
TTAAGCTTGGAATCTTCAGC+AGG + chr5_1:25759567-25759586 None:intergenic 40.0%
CTCTTTATGGTCCTCAAAAC+TGG - chr5_1:25759598-25759617 Msa0725860:intron 40.0%
GAAAAGTTGGAAGGAAGATC+AGG - chr5_1:25759633-25759652 Msa0725860:intron 40.0%
GTTTGAATTGACGGTGACTT+TGG - chr5_1:25759722-25759741 Msa0725860:intron 40.0%
AACAAGATTGTGAGCATGCT+TGG + chr5_1:25759839-25759858 None:intergenic 40.0%
GCTAAGATGGTTCAACCAAT+TGG - chr5_1:25760092-25760111 Msa0725860:intron 40.0%
TGGATCCAAGAATCAACAGA+AGG - chr5_1:25760112-25760131 Msa0725860:intron 40.0%
GGATCCAAGAATCAACAGAA+GGG - chr5_1:25760113-25760132 Msa0725860:intron 40.0%
!! AATGCCCTTCTGTTGATTCT+TGG + chr5_1:25760120-25760139 None:intergenic 40.0%
AAGTCTCTCTTCCTCTTCTT+CGG + chr5_1:25760145-25760164 None:intergenic 40.0%
ATGGAGCAAAATCCAAGCTT+TGG - chr5_1:25760336-25760355 Msa0725860:CDS 40.0%
GCTCCATTGAGAAAATAAGG+TGG + chr5_1:25760399-25760418 None:intergenic 40.0%
GCATACAAACCAACATGTAG+GGG + chr5_1:25760552-25760571 None:intergenic 40.0%
GAGCATACAAACCAACATGT+AGG + chr5_1:25760554-25760573 None:intergenic 40.0%
!! GCACCTTTTGATTACTTCTC+TGG - chr5_1:25760579-25760598 Msa0725860:CDS 40.0%
TATTCTTGTAGGAGACACCA+TGG - chr5_1:25760645-25760664 Msa0725860:intron 40.0%
! ACTAATCCCTCGAGTATTGT+GGG - chr5_1:25760865-25760884 Msa0725860:intron 40.0%
! GAGTATTGTGGGACTCAAAT+GGG - chr5_1:25760876-25760895 Msa0725860:intron 40.0%
CAGCAGCGTTAAAACTCTTT+GGG + chr5_1:25760913-25760932 None:intergenic 40.0%
TTGCTTAGATGAGATGGAAC+AGG + chr5_1:25760986-25761005 None:intergenic 40.0%
CCAAGATTGCTTAGATGAGA+TGG + chr5_1:25760992-25761011 None:intergenic 40.0%
CCATCTCATCTAAGCAATCT+TGG - chr5_1:25760989-25761008 Msa0725860:intron 40.0%
!! AGTTGGTAGAAGCAATGACA+TGG - chr5_1:25761295-25761314 Msa0725860:CDS 40.0%
AATCAGATCAGATACTGGGA+TGG - chr5_1:25761332-25761351 Msa0725860:CDS 40.0%
! TGTTGATAGAGAGAGATCCG+AGG + chr5_1:25759239-25759258 None:intergenic 45.0%
GAGGATGATATGGAGGGAAA+AGG - chr5_1:25759396-25759415 Msa0725860:CDS 45.0%
GGTTCTTATTGGAGTGAGGA+AGG - chr5_1:25759417-25759436 Msa0725860:CDS 45.0%
! CCTCTTTGCCACTTCCATTA+GGG + chr5_1:25759500-25759519 None:intergenic 45.0%
! TCCTCTTTGCCACTTCCATT+AGG + chr5_1:25759501-25759520 None:intergenic 45.0%
! GTAAATGTGCAAGAGGGCAT+TGG - chr5_1:25759538-25759557 Msa0725860:intron 45.0%
TATGCGAAGGCAAGAGTTGT+AGG - chr5_1:25760070-25760089 Msa0725860:intron 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr5_1:25760079-25760098 Msa0725860:intron 45.0%
!! AAGGGCATTTACCGAAGAAG+AGG - chr5_1:25760131-25760150 Msa0725860:intron 45.0%
ATGATAGCAAGACTCTTCCC+AGG - chr5_1:25760201-25760220 Msa0725860:CDS 45.0%
CAGCATTGTCTGTTCTTCCT+GGG + chr5_1:25760221-25760240 None:intergenic 45.0%
ACAGCATTGTCTGTTCTTCC+TGG + chr5_1:25760222-25760241 None:intergenic 45.0%
GAGAACAATCCAGTGCATAC+AGG - chr5_1:25760280-25760299 Msa0725860:CDS 45.0%
TCTTCTTCTCCTGTATGCAC+TGG + chr5_1:25760292-25760311 None:intergenic 45.0%
GGGGCTCCATTGAGAAAATA+AGG + chr5_1:25760402-25760421 None:intergenic 45.0%
TGGACACACTATTCCCAAGT+GGG + chr5_1:25760422-25760441 None:intergenic 45.0%
ATGGACACACTATTCCCAAG+TGG + chr5_1:25760423-25760442 None:intergenic 45.0%
TCTTTCCAACATTGTGCTCC+TGG - chr5_1:25760459-25760478 Msa0725860:CDS 45.0%
! GACTAATCCCTCGAGTATTG+TGG - chr5_1:25760864-25760883 Msa0725860:intron 45.0%
TTGAGTCCCACAATACTCGA+GGG + chr5_1:25760874-25760893 None:intergenic 45.0%
TTTGAGTCCCACAATACTCG+AGG + chr5_1:25760875-25760894 None:intergenic 45.0%
! CGAGTATTGTGGGACTCAAA+TGG - chr5_1:25760875-25760894 Msa0725860:intron 45.0%
GCAGCAGCGTTAAAACTCTT+TGG + chr5_1:25760914-25760933 None:intergenic 45.0%
GCGATGACGACCACAATATT+AGG - chr5_1:25761103-25761122 Msa0725860:CDS 45.0%
TGGTAGAAGCAATGACATGG+TGG - chr5_1:25761298-25761317 Msa0725860:CDS 45.0%
AGGAGTTTCAACAGCATCTG+GGG + chr5_1:25761534-25761553 None:intergenic 45.0%
GAGGAGTTTCAACAGCATCT+GGG + chr5_1:25761535-25761554 None:intergenic 45.0%
TGAGGAGTTTCAACAGCATC+TGG + chr5_1:25761536-25761555 None:intergenic 45.0%
! TGTTGATAGAGAGAGATCCG+AGG + chr5_1:25759239-25759258 None:intergenic 45.0%
GAGGATGATATGGAGGGAAA+AGG - chr5_1:25759396-25759415 Msa0725860:CDS 45.0%
GGTTCTTATTGGAGTGAGGA+AGG - chr5_1:25759417-25759436 Msa0725860:CDS 45.0%
! CCTCTTTGCCACTTCCATTA+GGG + chr5_1:25759500-25759519 None:intergenic 45.0%
! TCCTCTTTGCCACTTCCATT+AGG + chr5_1:25759501-25759520 None:intergenic 45.0%
! GTAAATGTGCAAGAGGGCAT+TGG - chr5_1:25759538-25759557 Msa0725860:intron 45.0%
TATGCGAAGGCAAGAGTTGT+AGG - chr5_1:25760070-25760089 Msa0725860:intron 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr5_1:25760079-25760098 Msa0725860:intron 45.0%
!! AAGGGCATTTACCGAAGAAG+AGG - chr5_1:25760131-25760150 Msa0725860:intron 45.0%
ATGATAGCAAGACTCTTCCC+AGG - chr5_1:25760201-25760220 Msa0725860:CDS 45.0%
CAGCATTGTCTGTTCTTCCT+GGG + chr5_1:25760221-25760240 None:intergenic 45.0%
ACAGCATTGTCTGTTCTTCC+TGG + chr5_1:25760222-25760241 None:intergenic 45.0%
GAGAACAATCCAGTGCATAC+AGG - chr5_1:25760280-25760299 Msa0725860:CDS 45.0%
TCTTCTTCTCCTGTATGCAC+TGG + chr5_1:25760292-25760311 None:intergenic 45.0%
GGGGCTCCATTGAGAAAATA+AGG + chr5_1:25760402-25760421 None:intergenic 45.0%
TGGACACACTATTCCCAAGT+GGG + chr5_1:25760422-25760441 None:intergenic 45.0%
ATGGACACACTATTCCCAAG+TGG + chr5_1:25760423-25760442 None:intergenic 45.0%
TCTTTCCAACATTGTGCTCC+TGG - chr5_1:25760459-25760478 Msa0725860:CDS 45.0%
! GACTAATCCCTCGAGTATTG+TGG - chr5_1:25760864-25760883 Msa0725860:intron 45.0%
TTGAGTCCCACAATACTCGA+GGG + chr5_1:25760874-25760893 None:intergenic 45.0%
TTTGAGTCCCACAATACTCG+AGG + chr5_1:25760875-25760894 None:intergenic 45.0%
! CGAGTATTGTGGGACTCAAA+TGG - chr5_1:25760875-25760894 Msa0725860:intron 45.0%
GCAGCAGCGTTAAAACTCTT+TGG + chr5_1:25760914-25760933 None:intergenic 45.0%
GCGATGACGACCACAATATT+AGG - chr5_1:25761103-25761122 Msa0725860:CDS 45.0%
TGGTAGAAGCAATGACATGG+TGG - chr5_1:25761298-25761317 Msa0725860:CDS 45.0%
AGGAGTTTCAACAGCATCTG+GGG + chr5_1:25761534-25761553 None:intergenic 45.0%
GAGGAGTTTCAACAGCATCT+GGG + chr5_1:25761535-25761554 None:intergenic 45.0%
TGAGGAGTTTCAACAGCATC+TGG + chr5_1:25761536-25761555 None:intergenic 45.0%
CCCTAATGGAAGTGGCAAAG+AGG - chr5_1:25759497-25759516 Msa0725860:intron 50.0%
!! AATGTGCAAGAGGGCATTGG+AGG - chr5_1:25759541-25759560 Msa0725860:intron 50.0%
! TTGACGGTGACTTTGGGAGA+CGG - chr5_1:25759729-25759748 Msa0725860:intron 50.0%
CCATTGTTGTGGTGTCTCTG+CGG + chr5_1:25760362-25760381 None:intergenic 50.0%
TTTCTCAATGGAGCCCCACT+TGG - chr5_1:25760405-25760424 Msa0725860:CDS 50.0%
TTCTCAATGGAGCCCCACTT+GGG - chr5_1:25760406-25760425 Msa0725860:CDS 50.0%
GGACACACTATTCCCAAGTG+GGG + chr5_1:25760421-25760440 None:intergenic 50.0%
TTCCAACATTGTGCTCCTGG+TGG - chr5_1:25760462-25760481 Msa0725860:CDS 50.0%
! TACCACCAGGAGCACAATGT+TGG + chr5_1:25760467-25760486 None:intergenic 50.0%
AACATTGTGCTCCTGGTGGT+AGG - chr5_1:25760466-25760485 Msa0725860:CDS 50.0%
ACATTGTGCTCCTGGTGGTA+GGG - chr5_1:25760467-25760486 Msa0725860:CDS 50.0%
TCTCTCTCACCACTCATGTG+AGG + chr5_1:25760516-25760535 None:intergenic 50.0%
GGTGAGAGAGAAGCTATGCA+AGG - chr5_1:25760525-25760544 Msa0725860:CDS 50.0%
ATGCAAGGACCCCTACATGT+TGG - chr5_1:25760540-25760559 Msa0725860:CDS 50.0%
CCCTAATGGAAGTGGCAAAG+AGG - chr5_1:25759497-25759516 Msa0725860:intron 50.0%
!! AATGTGCAAGAGGGCATTGG+AGG - chr5_1:25759541-25759560 Msa0725860:intron 50.0%
! TTGACGGTGACTTTGGGAGA+CGG - chr5_1:25759729-25759748 Msa0725860:intron 50.0%
CCATTGTTGTGGTGTCTCTG+CGG + chr5_1:25760362-25760381 None:intergenic 50.0%
TTTCTCAATGGAGCCCCACT+TGG - chr5_1:25760405-25760424 Msa0725860:CDS 50.0%
TTCTCAATGGAGCCCCACTT+GGG - chr5_1:25760406-25760425 Msa0725860:CDS 50.0%
GGACACACTATTCCCAAGTG+GGG + chr5_1:25760421-25760440 None:intergenic 50.0%
TTCCAACATTGTGCTCCTGG+TGG - chr5_1:25760462-25760481 Msa0725860:CDS 50.0%
! TACCACCAGGAGCACAATGT+TGG + chr5_1:25760467-25760486 None:intergenic 50.0%
AACATTGTGCTCCTGGTGGT+AGG - chr5_1:25760466-25760485 Msa0725860:CDS 50.0%
ACATTGTGCTCCTGGTGGTA+GGG - chr5_1:25760467-25760486 Msa0725860:CDS 50.0%
TCTCTCTCACCACTCATGTG+AGG + chr5_1:25760516-25760535 None:intergenic 50.0%
GGTGAGAGAGAAGCTATGCA+AGG - chr5_1:25760525-25760544 Msa0725860:CDS 50.0%
ATGCAAGGACCCCTACATGT+TGG - chr5_1:25760540-25760559 Msa0725860:CDS 50.0%
CCGCAGAGACACCACAACAA+TGG - chr5_1:25760359-25760378 Msa0725860:CDS 55.0%
CCATACTCAACCCTACCACC+AGG + chr5_1:25760480-25760499 None:intergenic 55.0%
CCTGGTGGTAGGGTTGAGTA+TGG - chr5_1:25760477-25760496 Msa0725860:CDS 55.0%
CCGCAGAGACACCACAACAA+TGG - chr5_1:25760359-25760378 Msa0725860:CDS 55.0%
CCATACTCAACCCTACCACC+AGG + chr5_1:25760480-25760499 None:intergenic 55.0%
CCTGGTGGTAGGGTTGAGTA+TGG - chr5_1:25760477-25760496 Msa0725860:CDS 55.0%
GTGTCTCTGCGGCCAAAGCT+TGG + chr5_1:25760351-25760370 None:intergenic 60.0%
GTCTCTGCAGTTACGCGCAG+AGG + chr5_1:25760847-25760866 None:intergenic 60.0%
GTGTCTCTGCGGCCAAAGCT+TGG + chr5_1:25760351-25760370 None:intergenic 60.0%
GTCTCTGCAGTTACGCGCAG+AGG + chr5_1:25760847-25760866 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 25759147 25761589 25759147 ID=Msa0725860;Name=Msa0725860
chr5_1 mRNA 25759147 25761589 25759147 ID=Msa0725860-mRNA-1;Parent=Msa0725860;Name=Msa0725860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0|1|1|1|3|0|440
chr5_1 exon 25761082 25761589 25761082 ID=Msa0725860-mRNA-1:exon:9280;Parent=Msa0725860-mRNA-1
chr5_1 exon 25760136 25760657 25760136 ID=Msa0725860-mRNA-1:exon:9279;Parent=Msa0725860-mRNA-1
chr5_1 exon 25759147 25759439 25759147 ID=Msa0725860-mRNA-1:exon:9278;Parent=Msa0725860-mRNA-1
chr5_1 CDS 25761082 25761589 25761082 ID=Msa0725860-mRNA-1:cds;Parent=Msa0725860-mRNA-1
chr5_1 CDS 25760136 25760657 25760136 ID=Msa0725860-mRNA-1:cds;Parent=Msa0725860-mRNA-1
chr5_1 CDS 25759147 25759439 25759147 ID=Msa0725860-mRNA-1:cds;Parent=Msa0725860-mRNA-1
Gene Sequence

>Msa0725860

ATGGCTAGCATGATCTCTTCACAAGAAAACCAATCTCTTTCTTCTTCTTTTTCATTTCCAATTTCTTCTATGCATATGGTATATGCAGACCTCGGATCTCTCTCTATCAACACAAACTATGGTGTTGTTTCAAGTTTAGACAAAGAGAGTAAAAATAGCTATGCCTATAAGAGCTTTGTGATGGAGAATGGTAGCGTCTTTCCATTTATGAGTGAGTGTCTTTCCAAAAGATATGAAGAACATAACATGGAGGATGATATGGAGGGAAAAGGTTCTTATTGGAGTGAGGAAGGTGAAAACAGTGAGAAAATAAACCATAATAACACTAACTTCAATGATGAGTTAGAGAACCCTAATGGAAGTGGCAAAGAGGAAGATAATGGACAGTCTAGTAAATGTGCAAGAGGGCATTGGAGGCCTGCTGAAGATTCCAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAAAACTGGAATCTTATAGCTGAAAAGTTGGAAGGAAGATCAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTGGATCCAAGAATCAACAGAAGGGCATTTACCGAAGAAGAGGAAGAGAGACTTATGCAAGCACATAGAATTTATGGAAACAAATGGGCAATGATAGCAAGACTCTTCCCAGGAAGAACAGACAATGCTGTGAAAAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCCAGTGCATACAGGAGAAGAAGATTGAGCCAAAATGTTTACAGCAGAATGGAGCAAAATCCAAGCTTTGGCCGCAGAGACACCACAACAATGGAAACAGAATCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTGTGTCCATTTTCCCATATGCTACTTCTTTCCAACATTGTGCTCCTGGTGGTAGGGTTGAGTATGGTTTAAATGTTTTACCTCACATGAGTGGTGAGAGAGAAGCTATGCAAGGACCCCTACATGTTGGTTTGTATGCTCAACAAGCACCTTTTGATTACTTCTCTGTTGGTAGAAGCAATGACATGGTGGAAGAACCATTCAATCAGATCAGATACTGGGATGGCACTAATGATGAATATCAACAACAACAACTATCTAGTGTCTACCATCATTATCCTCAACAATATTTGATGACAAAGCAAAATCAAAACAATCACAATTTTCACATTTTCTCAAATTCATCAGCATCAGCAACATATCATAATGCAGGAAACAGTGAAAAAGTTCTGAATGATGACACCCCAGATGCTGTTGAAACTCCTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA

Protein sequence

>Msa0725860

MASMISSQENQSLSSSFSFPISSMHMVYADLGSLSINTNYGVVSSLDKESKNSYAYKSFVMENGSVFPFMSECLSKRYEEHNMEDDMEGKGSYWSEEGENSEKINHNNTNFNDELENPNGSGKEEDNGQSSKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQNVYSRMEQNPSFGRRDTTTMETESSPPYFLNGAPLGNSVSIFPYATSFQHCAPGGRVEYGLNVLPHMSGEREAMQGPLHVGLYAQQAPFDYFSVGRSNDMVEEPFNQIRYWDGTNDEYQQQQLSSVYHHYPQQYLMTKQNQNNHNFHIFSNSSASATYHNAGNSEKVLNDDTPDAVETPQFFDFLGVGAT*