AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0819890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819890 MtrunA17_Chr5g0439271 96.303 595 22 0 195 789 8 602 0.0 1195
Msa0819890 MtrunA17_Chr7g0250481 58.163 784 303 10 21 788 23 797 0.0 885
Msa0819890 MtrunA17_Chr7g0250371 60.179 781 291 13 13 788 19 784 0.0 884
Msa0819890 MtrunA17_Chr7g0250391 59.288 786 302 12 8 788 10 782 0.0 861
Msa0819890 MtrunA17_Chr7g0250411 57.982 783 304 15 13 788 19 783 0.0 846
Msa0819890 MtrunA17_Chr7g0250331 58.312 794 292 16 22 788 25 806 0.0 831
Msa0819890 MtrunA17_Chr3g0120521 51.499 767 340 12 28 788 29 769 0.0 746
Msa0819890 MtrunA17_Chr4g0057531 51.558 770 349 12 23 788 27 776 0.0 737
Msa0819890 MtrunA17_Chr4g0057471 50.135 740 324 14 62 788 1 708 0.0 694
Msa0819890 MtrunA17_Chr4g0076611 50.000 730 314 15 73 788 1 693 0.0 672
Msa0819890 MtrunA17_Chr4g0057481 52.143 700 303 14 95 788 16 689 0.0 660
Msa0819890 MtrunA17_Chr4g0057461 50.462 650 284 14 153 788 3 628 0.0 603
Msa0819890 MtrunA17_Chr4g0057511 50.391 639 284 13 157 788 3 615 0.0 583
Msa0819890 MtrunA17_Chr4g0057491 49.614 647 287 12 153 788 3 621 0.0 582
Msa0819890 MtrunA17_Chr5g0423261 49.065 642 300 11 152 788 2 621 0.0 576
Msa0819890 MtrunA17_Chr4g0037221 42.219 739 376 18 70 788 60 767 0.0 553
Msa0819890 MtrunA17_Chr4g0053781 39.898 787 416 20 13 788 14 754 2.39e-180 535
Msa0819890 MtrunA17_Chr5g0401511 41.272 802 413 21 1 787 1 759 2.73e-180 535
Msa0819890 MtrunA17_Chr1g0204321 40.125 800 432 20 1 788 12 776 1.31e-175 524
Msa0819890 MtrunA17_Chr7g0250461 59.395 463 171 9 13 471 19 468 3.83e-175 512
Msa0819890 MtrunA17_Chr4g0026641 42.327 782 376 24 28 788 26 753 1.47e-174 520
Msa0819890 MtrunA17_Chr4g0020651 40.527 797 415 20 4 786 3 754 1.70e-173 518
Msa0819890 MtrunA17_Chr2g0300751 39.088 811 414 26 10 786 6 770 1.96e-169 508
Msa0819890 MtrunA17_Chr1g0152771 38.143 797 429 21 10 786 8 760 9.48e-167 501
Msa0819890 MtrunA17_Chr8g0369891 40.593 776 390 23 28 788 33 752 5.18e-166 498
Msa0819890 MtrunA17_Chr5g0407701 41.009 773 394 25 28 788 27 749 5.69e-165 496
Msa0819890 MtrunA17_Chr7g0262161 38.501 774 423 18 29 788 26 760 2.20e-160 484
Msa0819890 MtrunA17_Chr3g0136151 39.508 772 410 20 28 788 36 761 1.23e-159 482
Msa0819890 MtrunA17_Chr2g0285121 39.523 797 406 23 28 788 26 782 2.03e-158 479
Msa0819890 MtrunA17_Chr4g0070391 38.161 794 420 25 8 786 12 749 4.87e-158 478
Msa0819890 MtrunA17_Chr8g0351011 38.672 768 400 23 30 788 46 751 1.95e-157 476
Msa0819890 MtrunA17_Chr3g0134621 37.803 783 395 21 21 786 26 733 1.22e-156 474
Msa0819890 MtrunA17_Chr2g0285111 38.994 795 413 20 28 788 29 785 1.30e-155 473
Msa0819890 MtrunA17_Chr8g0377961 39.203 778 407 22 30 788 44 774 1.95e-154 469
Msa0819890 MtrunA17_Chr3g0143251 38.018 797 435 18 8 788 11 764 1.12e-153 467
Msa0819890 MtrunA17_Chr8g0354771 37.292 783 434 18 24 788 20 763 1.36e-152 464
Msa0819890 MtrunA17_Chr8g0344331 38.912 735 393 22 72 786 74 772 1.73e-149 456
Msa0819890 MtrunA17_Chr8g0334521 36.742 792 420 24 5 788 15 733 2.85e-148 452
Msa0819890 MtrunA17_Chr7g0246461 38.759 725 370 22 73 788 80 739 2.93e-148 452
Msa0819890 MtrunA17_Chr8g0344971 37.436 780 423 19 27 788 27 759 1.40e-147 451
Msa0819890 MtrunA17_Chr6g0470851 37.953 801 407 29 3 788 4 729 8.87e-147 448
Msa0819890 MtrunA17_Chr7g0246451 36.632 778 401 22 30 788 41 745 3.70e-146 447
Msa0819890 MtrunA17_Chr1g0146271 36.080 801 423 24 1 788 8 732 1.72e-144 442
Msa0819890 MtrunA17_Chr7g0227991 37.032 802 408 26 8 788 8 733 2.91e-144 441
Msa0819890 MtrunA17_Chr6g0470881 37.469 806 404 26 3 788 4 729 4.04e-144 441
Msa0819890 MtrunA17_Chr5g0447171 46.476 525 211 10 311 788 6 507 8.60e-144 432
Msa0819890 MtrunA17_Chr1g0170081 35.492 803 423 25 1 788 8 730 2.55e-142 436
Msa0819890 MtrunA17_Chr1g0146251 36.111 792 423 23 8 788 15 734 1.39e-141 434
Msa0819890 MtrunA17_Chr1g0189251 36.727 825 413 25 1 788 1 753 1.14e-140 433
Msa0819890 MtrunA17_Chr8g0345971 39.891 737 366 21 73 788 78 758 1.35e-140 433
Msa0819890 MtrunA17_Chr8g0334491 37.325 785 394 28 20 788 25 727 3.45e-139 428
Msa0819890 MtrunA17_Chr7g0266051 36.667 750 400 19 55 789 17 706 1.16e-138 426
Msa0819890 MtrunA17_Chr3g0079971 36.940 804 403 29 8 788 9 731 3.15e-137 423
Msa0819890 MtrunA17_Chr4g0057061 37.743 771 414 22 28 788 60 774 4.51e-137 424
Msa0819890 MtrunA17_Chr8g0345981 39.018 733 384 22 73 788 71 757 6.43e-137 423
Msa0819890 MtrunA17_Chr8g0345991 38.160 739 380 22 73 788 69 753 1.54e-136 422
Msa0819890 MtrunA17_Chr8g0354741 39.352 648 352 14 147 788 21 633 4.02e-135 414
Msa0819890 MtrunA17_Chr5g0439281 94.416 197 11 0 1 197 1 197 9.08e-132 389
Msa0819890 MtrunA17_Chr2g0303881 38.115 732 390 17 73 788 41 725 3.22e-130 405
Msa0819890 MtrunA17_Chr8g0376841 40.165 605 289 17 27 616 39 585 6.95e-129 397
Msa0819890 MtrunA17_Chr5g0398241 35.849 795 434 19 13 789 18 754 7.99e-129 402
Msa0819890 MtrunA17_Chr1g0189561 35.476 809 446 25 1 788 7 760 9.59e-129 402
Msa0819890 MtrunA17_Chr5g0398401 35.472 795 437 19 13 789 18 754 2.74e-127 398
Msa0819890 MtrunA17_Chr7g0276151 37.178 737 384 21 73 788 77 755 7.23e-127 397
Msa0819890 MtrunA17_Chr8g0345961 36.729 746 414 18 59 788 53 756 8.11e-126 394
Msa0819890 MtrunA17_Chr5g0398311 36.506 767 419 17 29 789 43 747 1.79e-124 390
Msa0819890 MtrunA17_Chr7g0248871 34.597 818 433 29 8 788 11 763 3.01e-123 388
Msa0819890 MtrunA17_Chr5g0398351 36.444 793 432 19 13 789 769 1505 4.49e-121 397
Msa0819890 MtrunA17_Chr5g0398351 36.154 780 427 18 20 789 16 734 3.70e-119 392
Msa0819890 MtrunA17_Chr5g0398331 35.779 777 432 20 20 789 35 751 2.73e-120 379
Msa0819890 MtrunA17_Chr3g0103061 60.806 273 96 4 1 272 1 263 1.83e-105 324
Msa0819890 MtrunA17_Chr7g0250441 61.484 283 105 4 509 788 1 282 2.32e-103 320
Msa0819890 MtrunA17_Chr7g0248861 35.538 650 348 19 22 649 22 622 1.99e-102 335
Msa0819890 MtrunA17_Chr7g0248861 45.492 244 118 8 136 377 629 859 1.00e-46 179
Msa0819890 MtrunA17_Chr4g0071871 34.443 781 423 33 55 787 73 812 1.96e-99 326
Msa0819890 MtrunA17_Chr2g0301011 36.522 575 263 17 102 674 4 478 2.02e-95 306
Msa0819890 MtrunA17_Chr2g0298601 34.048 746 414 29 55 757 73 783 5.14e-94 311
Msa0819890 MtrunA17_Chr7g0261701 51.557 289 130 4 503 788 8 289 2.11e-93 294
Msa0819890 MtrunA17_Chr7g0261691 48.485 330 151 8 153 478 17 331 2.96e-89 285
Msa0819890 MtrunA17_Chr3g0143241 40.260 462 242 12 8 463 11 444 5.04e-89 291
Msa0819890 MtrunA17_Chr3g0103071 47.811 297 141 3 283 579 1 283 2.29e-83 267
Msa0819890 MtrunA17_Chr2g0302951 32.000 775 464 27 52 789 91 839 1.54e-81 278
Msa0819890 MtrunA17_Chr4g0075331 31.880 734 425 24 58 750 2 701 3.53e-79 270
Msa0819890 MtrunA17_Chr8g0380961 31.532 777 458 30 55 789 102 846 6.97e-79 271
Msa0819890 MtrunA17_Chr6g0480721 41.742 333 160 7 73 401 5 307 1.06e-68 238
Msa0819890 MtrunA17_Chr6g0480721 38.182 275 153 5 521 789 337 600 1.94e-49 184
Msa0819890 MtrunA17_Chr4g0026651 43.492 315 142 8 87 376 1 304 2.87e-66 223
Msa0819890 MtrunA17_Chr8g0346361 41.667 276 147 5 519 788 229 496 2.63e-63 220
Msa0819890 MtrunA17_Chr8g0346361 43.966 232 103 9 164 394 2 207 3.07e-45 170
Msa0819890 MtrunA17_Chr3g0105451 41.577 279 140 6 519 788 14 278 4.11e-60 204
Msa0819890 MtrunA17_Chr3g0105461 40.974 349 146 8 28 376 34 322 7.50e-59 204
Msa0819890 MtrunA17_Chr3g0097061 39.697 330 165 10 102 431 4 299 1.05e-57 203
Msa0819890 MtrunA17_Chr3g0097061 43.103 116 59 1 571 686 330 438 3.77e-26 112
Msa0819890 MtrunA17_Chr2g0301031 44.094 254 129 5 540 788 1 246 1.19e-57 197
Msa0819890 MtrunA17_Chr2g0312861 43.137 255 130 6 540 788 1 246 8.35e-57 197
Msa0819890 MtrunA17_Chr4g0026661 44.922 256 126 7 540 788 12 259 8.73e-56 192
Msa0819890 MtrunA17_Chr5g0447151 60.000 150 60 0 5 154 6 155 3.19e-52 178
Msa0819890 MtrunA17_Chr4g0057501 64.286 126 44 1 29 154 6 130 1.00e-49 171
Msa0819890 MtrunA17_Chr2g0301911 33.681 383 191 15 169 543 33 360 2.62e-44 164
Msa0819890 MtrunA17_Chr3g0103081 52.448 143 66 2 647 788 1 142 1.69e-43 154
Msa0819890 MtrunA17_Chr2g0301921 40.187 214 113 6 581 788 1 205 9.62e-42 151
Msa0819890 MtrunA17_Chr4g0035881 54.110 146 63 2 231 376 4 145 4.72e-39 147
Msa0819890 MtrunA17_Chr4g0035881 54.310 116 47 2 502 612 203 317 8.11e-28 115
Msa0819890 MtrunA17_Chr2g0312841 42.786 201 91 5 167 367 10 186 9.06e-39 142
Msa0819890 MtrunA17_Chr5g0436021 44.828 174 83 3 192 365 28 188 1.49e-38 141
Msa0819890 MtrunA17_Chr5g0418921 50.746 134 64 1 509 640 1 134 4.11e-31 120
Msa0819890 MtrunA17_Chr4g0057521 61.628 86 32 1 67 152 13 97 5.09e-30 116
Msa0819890 MtrunA17_Chr3g0142981 43.312 157 59 1 220 376 48 174 7.62e-29 114
Msa0819890 MtrunA17_Chr4g0071191 33.663 202 121 3 521 717 57 250 4.70e-28 113
Msa0819890 MtrunA17_Chr3g0143231 56.667 90 38 1 523 612 1 89 1.60e-25 100
Msa0819890 MtrunA17_Chr7g0261681 58.025 81 34 0 73 153 1 81 2.82e-23 95.1
Msa0819890 MtrunA17_Chr3g0142971 53.488 86 39 1 523 608 1 85 4.07e-22 91.3
Msa0819890 MtrunA17_Chr4g0035871 40.141 142 77 3 54 195 17 150 5.92e-21 90.1
Msa0819890 MtrunA17_Chr8g0346351 34.337 166 85 6 5 165 12 158 1.35e-18 84.0
Msa0819890 MtrunA17_Chr3g0143021 38.938 113 62 2 70 182 4 109 2.79e-17 78.2
Msa0819890 MtrunA17_Chr5g0436031 33.333 165 101 5 631 789 20 181 2.80e-17 81.6
Msa0819890 MtrunA17_Chr8g0354731 37.692 130 74 2 23 152 47 169 4.50e-17 79.7
Msa0819890 MtrunA17_Chr5g0398341 50.000 84 42 0 581 664 1 84 1.33e-16 75.9
Msa0819890 MtrunA17_Chr8g0376851 32.099 162 102 5 634 788 11 171 1.98e-16 77.8
Msa0819890 MtrunA17_Chr2g0301021 36.184 152 72 5 289 431 189 324 2.20e-16 82.0
Msa0819890 MtrunA17_Chr3g0142961 36.364 132 75 4 622 744 4 135 4.72e-16 75.9
Msa0819890 MtrunA17_Chr2g0312831 35.156 128 70 4 3 124 4 124 3.16e-15 73.6
Msa0819890 MtrunA17_Chr5g0434941 50.000 74 36 1 288 360 1 74 1.90e-13 66.2
Msa0819890 MtrunA17_Chr2g0301901 35.772 123 71 3 5 126 11 126 4.56e-13 67.4
Msa0819890 MtrunA17_Chr3g0077671 43.529 85 46 2 559 641 224 308 7.18e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819890 AT2G04160.1 51.309 764 344 11 29 788 31 770 0.0 761
Msa0819890 AT5G59810.1 50.845 769 342 11 25 788 37 774 0.0 734
Msa0819890 AT5G67360.1 41.310 794 408 22 9 788 5 754 0.0 547
Msa0819890 AT4G34980.1 38.710 806 419 23 5 788 6 758 1.35e-173 518
Msa0819890 AT2G05920.1 40.561 784 396 23 18 786 19 747 1.54e-173 518
Msa0819890 AT5G45650.2 39.875 800 408 22 27 788 24 788 7.14e-166 499
Msa0819890 AT5G45650.1 39.875 800 408 22 27 788 24 788 7.14e-166 499
Msa0819890 AT5G51750.1 38.979 803 438 20 4 788 6 774 9.02e-166 499
Msa0819890 AT3G14240.1 38.144 776 431 19 29 788 27 769 1.70e-162 490
Msa0819890 AT3G14067.1 37.935 804 430 27 8 788 10 767 2.91e-160 484
Msa0819890 AT1G20160.1 38.053 791 431 18 13 788 15 761 5.29e-158 478
Msa0819890 AT1G20160.2 39.615 727 396 15 73 788 28 722 6.14e-157 474
Msa0819890 AT1G20150.1 39.666 779 409 23 30 788 33 770 1.35e-156 475
Msa0819890 AT5G59100.1 38.987 790 380 27 21 788 28 737 9.83e-156 472
Msa0819890 AT4G10520.1 38.250 800 418 23 6 788 4 744 1.15e-152 464
Msa0819890 AT1G01900.1 39.781 729 390 17 73 788 79 771 1.25e-152 465
Msa0819890 AT5G58830.1 37.437 796 377 24 8 788 16 705 6.04e-151 458
Msa0819890 AT5G59120.1 38.224 777 387 22 27 788 29 727 9.53e-151 458
Msa0819890 AT4G10550.1 37.625 800 443 19 3 788 9 766 1.63e-150 459
Msa0819890 AT5G59090.1 38.630 774 394 24 24 788 27 728 2.10e-150 457
Msa0819890 AT4G10550.3 38.041 786 431 19 17 788 39 782 3.36e-150 459
Msa0819890 AT5G59090.3 38.630 774 392 25 24 788 27 726 3.15e-149 454
Msa0819890 AT5G59090.2 38.292 773 393 23 24 788 27 723 3.61e-149 454
Msa0819890 AT5G03620.1 38.376 813 410 26 7 789 8 759 4.80e-149 455
Msa0819890 AT1G32940.1 38.175 778 421 22 28 788 28 762 2.20e-148 454
Msa0819890 AT5G59130.4 37.657 794 408 24 2 788 12 725 2.47e-148 452
Msa0819890 AT1G04110.1 36.070 804 455 18 7 788 4 770 1.30e-147 452
Msa0819890 AT5G59130.2 37.406 794 400 24 2 788 12 715 8.51e-147 448
Msa0819890 AT5G59130.1 37.657 794 404 25 2 788 12 721 1.23e-146 448
Msa0819890 AT5G59190.1 38.678 711 361 19 55 757 15 658 2.10e-146 446
Msa0819890 AT3G46850.1 38.860 772 400 25 24 788 28 734 1.18e-145 445
Msa0819890 AT5G59130.3 38.420 734 373 19 66 788 21 686 1.26e-145 444
Msa0819890 AT4G26330.2 39.704 743 397 18 65 789 13 722 2.05e-145 445
Msa0819890 AT1G32950.1 37.500 784 433 19 20 788 20 761 2.93e-145 446
Msa0819890 AT3G46840.1 37.814 796 420 25 1 788 6 734 3.43e-145 444
Msa0819890 AT4G00230.1 38.752 769 398 22 30 788 38 743 3.67e-145 444
Msa0819890 AT1G32960.1 37.260 781 424 23 28 788 31 765 5.77e-145 445
Msa0819890 AT4G10550.4 37.718 745 415 17 58 788 1 710 1.08e-141 435
Msa0819890 AT4G10550.2 37.718 745 415 17 58 788 1 710 1.08e-141 435
Msa0819890 AT1G32940.4 38.102 748 409 21 58 788 1 711 1.57e-141 434
Msa0819890 AT1G32940.2 38.102 748 409 21 58 788 1 711 1.57e-141 434
Msa0819890 AT4G26330.1 38.970 757 397 19 65 789 13 736 1.58e-141 435
Msa0819890 AT5G58840.1 36.318 793 406 19 2 788 7 706 1.84e-141 434
Msa0819890 AT5G58820.1 37.500 776 369 21 27 788 27 700 6.53e-140 429
Msa0819890 AT1G66210.1 36.375 789 415 23 19 788 30 750 3.97e-139 429
Msa0819890 AT1G32950.2 37.668 746 414 18 58 788 1 710 1.81e-138 426
Msa0819890 AT4G10510.3 36.341 787 443 20 17 788 22 765 2.64e-138 427
Msa0819890 AT4G21630.1 36.978 814 415 26 6 788 7 753 5.07e-138 426
Msa0819890 AT4G10540.1 35.750 800 432 21 17 788 18 763 9.76e-138 426
Msa0819890 AT4G10530.1 36.160 802 431 22 1 788 1 735 1.80e-137 424
Msa0819890 AT4G10510.1 36.434 774 434 20 30 788 23 753 2.93e-137 424
Msa0819890 AT4G21650.1 38.053 791 398 28 24 788 36 760 1.41e-136 423
Msa0819890 AT5G11940.1 36.189 782 413 21 28 788 36 752 2.05e-135 420
Msa0819890 AT5G45640.1 37.154 759 381 20 81 788 38 751 4.90e-133 413
Msa0819890 AT4G10510.4 36.193 746 424 19 58 788 1 709 6.43e-131 407
Msa0819890 AT1G66220.1 36.514 786 401 23 26 788 34 744 1.69e-130 407
Msa0819890 AT4G10510.2 35.978 731 416 19 73 788 1 694 2.25e-126 394
Msa0819890 AT5G03620.2 39.903 619 308 17 7 612 8 575 6.39e-123 381
Msa0819890 AT1G32940.3 39.152 613 326 15 28 630 28 603 5.25e-119 372
Msa0819890 AT1G32970.1 34.854 789 423 27 15 788 10 722 1.51e-118 375
Msa0819890 AT4G15040.2 35.484 744 396 23 55 788 16 685 1.65e-117 370
Msa0819890 AT4G15040.1 35.484 744 396 23 55 788 16 685 1.65e-117 370
Msa0819890 AT4G21323.1 35.324 787 403 25 30 786 81 791 9.91e-117 372
Msa0819890 AT4G00230.2 40.136 588 296 15 30 615 38 571 1.21e-113 357
Msa0819890 AT5G67090.1 34.818 741 368 27 70 777 57 715 6.88e-111 355
Msa0819890 AT4G21326.1 32.844 749 423 20 58 788 1 687 1.15e-110 353
Msa0819890 AT5G58840.3 36.926 631 291 16 2 623 7 539 1.25e-107 340
Msa0819890 AT4G30020.3 32.826 789 429 32 56 789 70 812 5.30e-96 317
Msa0819890 AT4G30020.1 32.826 789 429 32 56 789 70 812 5.30e-96 317
Msa0819890 AT4G30020.4 32.826 789 429 32 56 789 70 812 5.30e-96 317
Msa0819890 AT4G30020.2 32.826 789 429 32 56 789 70 812 5.30e-96 317
Msa0819890 AT1G30600.1 32.695 783 442 28 55 789 82 827 1.44e-95 317
Msa0819890 AT2G19170.1 33.078 783 434 35 56 789 70 811 1.67e-95 316
Msa0819890 AT2G19170.2 33.078 783 434 35 56 789 70 811 1.67e-95 316
Msa0819890 AT1G20160.3 36.636 535 292 12 13 541 15 508 1.68e-88 290
Msa0819890 AT4G20430.3 31.242 749 444 25 53 759 101 820 8.10e-87 293
Msa0819890 AT4G20430.1 31.242 749 444 25 53 759 101 820 8.10e-87 293
Msa0819890 AT2G39850.1 30.519 829 419 38 27 788 27 765 7.14e-85 286
Msa0819890 AT4G20430.2 31.030 738 436 23 53 759 101 796 7.98e-85 287
Msa0819890 AT5G44530.1 31.194 779 462 27 53 789 88 834 7.08e-83 282
Msa0819890 AT1G62340.1 32.016 734 425 27 55 743 82 786 4.31e-81 277
Msa0819890 AT5G44530.2 30.224 804 462 28 53 789 88 859 7.64e-78 269
Msa0819890 AT4G21640.1 41.026 390 196 12 8 380 20 392 1.02e-77 266
Msa0819890 AT4G21640.1 41.554 296 151 9 502 788 445 727 2.60e-50 189
Msa0819890 AT5G58840.2 39.066 407 208 10 2 408 7 373 2.56e-73 247
Msa0819890 AT5G44530.3 31.423 541 318 19 52 562 87 604 3.62e-52 192
Msa0819890 AT1G32980.1 41.579 190 106 4 575 760 1 189 7.14e-36 134
Msa0819890 AT5G59110.1 37.267 161 92 6 636 788 7 166 2.90e-24 100

Find 178 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAGTTCATTGACATTTA+AGG 0.106897 5_3:-56815184 Msa0819890:CDS
TCAACAACTTGAAGAATTTA+AGG 0.116991 5_3:-56815217 Msa0819890:CDS
GGCTTTGAAGCTGCTCTTGC+AGG 0.182619 5_3:-56816901 Msa0819890:CDS
TCATTGACATTTAAGGAAAT+TGG 0.202709 5_3:-56815177 Msa0819890:CDS
CTCACAGCACGTGACTTTAT+TGG 0.216825 5_3:-56817780 Msa0819890:CDS
AGCACATGCTTACCTTTCTA+AGG 0.225071 5_3:+56819819 None:intergenic
GATTTACTTGCTTCAATCTT+AGG 0.232077 5_3:-56819607 Msa0819890:CDS
CCTCATGTTGCTGGCATTGC+TGG 0.232103 5_3:-56815836 Msa0819890:CDS
TAATTGTGCTTATGGTTATT+TGG 0.237671 5_3:-56814971 Msa0819890:three_prime_UTR
TTGTATACCTTGAGTATTAA+TGG 0.240342 5_3:+56816471 None:intergenic
TATATTATAATGCAGGAAAA+TGG 0.251364 5_3:-56816586 Msa0819890:intron
TCCTTTACCTGGTGCAAGTA+TGG 0.254370 5_3:-56816815 Msa0819890:CDS
TGATGTGATTTCAACTTCTT+TGG 0.256845 5_3:-56817553 Msa0819890:CDS
GATGAAAACCCAGCCATAAT+TGG 0.268338 5_3:+56816516 None:intergenic
GTGAACAAAGCTTCAATATA+TGG 0.271746 5_3:+56817519 None:intergenic
ATCATTGCTAATTTAGATTC+AGG 0.275726 5_3:-56819170 Msa0819890:intron
CTTTGACCAACATACTTTGT+AGG 0.283223 5_3:+56817644 None:intergenic
CATATTGTGATTCGTAGTTT+TGG 0.287628 5_3:+56817823 None:intergenic
ACAAATTATAGAAAACTAAT+TGG 0.289969 5_3:-56817861 Msa0819890:intron
ACAAGGTCATGGGACTTTCT+TGG 0.296242 5_3:-56819260 Msa0819890:CDS
TCACCTGATGTAACAATATT+CGG 0.298451 5_3:-56817717 Msa0819890:CDS
TCTTACAATAAGCATATAAA+TGG 0.304355 5_3:-56819473 Msa0819890:CDS
AGTTTCAGTGGCATTGGATA+TGG 0.305789 5_3:-56818898 Msa0819890:CDS
TTCACTGATGGAATTTCAAT+TGG 0.310273 5_3:-56817501 Msa0819890:CDS
ATATGATATCCATACATTAT+AGG 0.313019 5_3:+56814849 None:intergenic
GTTGTCGTTGTTTGTTCTGC+TGG 0.313843 5_3:-56817453 Msa0819890:CDS
TTGGTAGGATCAAGTGTTCT+AGG 0.318013 5_3:+56816982 None:intergenic
ATTAAAGCCATCTCCAATTA+TGG 0.319155 5_3:-56816529 Msa0819890:CDS
ATGTCTTGTCCTCATGTTGC+TGG 0.337178 5_3:-56815845 Msa0819890:CDS
AGATCATCAAGGGAGGGATT+TGG 0.343007 5_3:+56819655 None:intergenic
TTTGTTAGCCATATTTCTAT+TGG 0.347963 5_3:-56817348 Msa0819890:CDS
ATAGCGACTCCATTTGAATA+TGG 0.349781 5_3:-56815510 Msa0819890:CDS
CAAGTCAATTTCCCAAATAC+TGG 0.351450 5_3:+56815096 None:intergenic
CAGATAATTCTAGAGGCAAT+AGG 0.359087 5_3:-56815138 Msa0819890:CDS
TTGCAGCTAGTACAATTGAT+AGG 0.366041 5_3:-56817374 Msa0819890:CDS
CGGTACGAGTAACGTTTATA+AGG 0.370101 5_3:+56815280 None:intergenic
CATCAAAATGGCGTGGGAAT+GGG 0.373921 5_3:-56818867 Msa0819890:CDS
ACTCCATTTGAATATGGTTC+TGG 0.377150 5_3:-56815504 Msa0819890:CDS
CCACTGAAACTTTCATGTTC+CGG 0.386600 5_3:+56818910 None:intergenic
GAATTTCTCTTGATTCTGCT+TGG 0.392718 5_3:-56819220 Msa0819890:CDS
GTTCCTTGTTGCAGATTGTA+AGG 0.394947 5_3:+56815872 None:intergenic
GGGAAATTGACTTGGACAAA+TGG 0.397704 5_3:-56815087 Msa0819890:CDS
ATCGATGAGCGTGAGTGGTT+TGG 0.399495 5_3:-56816772 Msa0819890:CDS
TGAGCTTACAAGACTACTAT+AGG 0.403036 5_3:+56815045 None:intergenic
CCATCAAAATGGCGTGGGAA+TGG 0.411213 5_3:-56818868 Msa0819890:CDS
GCTTGGTGGAAGGCAAGATT+TGG 0.411231 5_3:-56819203 Msa0819890:CDS
GATGTGATTTCAACTTCTTT+GGG 0.412723 5_3:-56817552 Msa0819890:CDS
CTGTTTCCTTTGCCTTCTCA+TGG 0.416029 5_3:+56819504 None:intergenic
TCCTTAAATGTCAATGAACT+TGG 0.416086 5_3:+56815183 None:intergenic
CAAAACTACGAATCACAATA+TGG 0.420918 5_3:-56817822 Msa0819890:CDS
TTATCGAACGCGTCTCTGAT+TGG 0.421421 5_3:+56815534 None:intergenic
GTTTGTTCTGCTGGGAATGA+TGG 0.421493 5_3:-56817444 Msa0819890:CDS
AATGGTTATCCTATAATGTA+TGG 0.428863 5_3:-56814858 None:intergenic
CATGAAAGTTTCAGTGGCAT+TGG 0.431620 5_3:-56818904 Msa0819890:CDS
TCAAGACACTTCATCCTAGT+TGG 0.433278 5_3:-56815808 Msa0819890:CDS
CTTGATCCTACCAAAGTAAA+GGG 0.434353 5_3:-56816973 Msa0819890:CDS
TATGTGTGTAATTGTGCTTA+TGG 0.441101 5_3:-56814979 Msa0819890:three_prime_UTR
CCTAACCTTGCAATGGATCC+AGG 0.444320 5_3:-56815471 Msa0819890:CDS
TCACGTGCTGTGAGGTTTGA+GGG 0.445205 5_3:+56817789 None:intergenic
CAGTATTTGGGAAATTGACT+TGG 0.447547 5_3:-56815095 Msa0819890:CDS
ATGGCAGATTTGATAGCAGC+TGG 0.451272 5_3:+56815782 None:intergenic
TTGCAAAATGTTGTATTTGA+AGG 0.451939 5_3:+56818817 None:intergenic
TAATATCTTTCCCTTTACTT+TGG 0.455724 5_3:+56816963 None:intergenic
TAAATCATAATGTGAATTTG+TGG 0.457110 5_3:+56819624 None:intergenic
ATTGAAGCTTTGTTCACTGA+TGG 0.459805 5_3:-56817513 Msa0819890:CDS
AAGCCATCTCCAATTATGGC+TGG 0.460623 5_3:-56816525 Msa0819890:CDS
ATCGATATCCTCGTCCTCAT+TGG 0.468082 5_3:+56816789 None:intergenic
GTCATGGGACTTTCTTGGAC+TGG 0.470096 5_3:-56819255 Msa0819890:CDS
TTGCCGAATATTGTTACATC+AGG 0.471070 5_3:+56817714 None:intergenic
TTTCTCTTGATTCTGCTTGG+TGG 0.474583 5_3:-56819217 Msa0819890:CDS
GTAGACATATATTGTATACT+TGG 0.475700 5_3:-56819695 Msa0819890:intron
TCCATACTTGCACCAGGTAA+AGG 0.476009 5_3:+56816814 None:intergenic
TCTTGATTCTGCTTGGTGGA+AGG 0.479653 5_3:-56819213 Msa0819890:CDS
ATGGTCAAGTGCCATCAAAA+TGG 0.479711 5_3:-56818879 Msa0819890:CDS
GCTGCTCTTGCAGGAGCTGT+AGG 0.480239 5_3:-56816892 Msa0819890:CDS
ACTCGTACCGTCACAAATGT+TGG 0.481576 5_3:-56815267 Msa0819890:CDS
CTTAGATCATAAACAAGTCC+TGG 0.482949 5_3:+56815453 None:intergenic
CGAGTAACGTTTATAAGGTT+CGG 0.483106 5_3:+56815285 None:intergenic
CAGCCTGACATAACTGCTCC+TGG 0.483975 5_3:-56815965 Msa0819890:CDS
TGTATTGAACAATGTTCTGC+TGG 0.484973 5_3:-56814906 Msa0819890:three_prime_UTR
ATCAAAATGGCGTGGGAATG+GGG 0.486112 5_3:-56818866 Msa0819890:CDS
ACAATATTCGGCAACGGTAA+CGG 0.486416 5_3:-56817705 Msa0819890:CDS
CGATTATACACAGTAATTGA+AGG 0.493869 5_3:+56815312 None:intergenic
GTGATCAATGATGAGAAAAG+TGG 0.495030 5_3:-56816862 Msa0819890:CDS
TCACTGATGGAATTTCAATT+GGG 0.496395 5_3:-56817500 Msa0819890:CDS
TGCTCCTGGAGTGAACATAT+TGG 0.499041 5_3:-56815951 Msa0819890:CDS
GGAATGATGGACCTGCTCAT+AGG 0.501150 5_3:-56817431 Msa0819890:CDS
ACTTGATCCTACCAAAGTAA+AGG 0.503049 5_3:-56816974 Msa0819890:CDS
TGTCCAGAACCATATTCAAA+TGG 0.505775 5_3:+56815501 None:intergenic
CTTAGTAAAGGCTTACCATC+AGG 0.508204 5_3:-56817202 Msa0819890:CDS
TTGTCGTTGTTTGTTCTGCT+GGG 0.509421 5_3:-56817452 Msa0819890:CDS
ATCTTTCCCTTTACTTTGGT+AGG 0.511771 5_3:+56816967 None:intergenic
TACTTACGCATCTTGAATTG+TGG 0.511895 5_3:+56817123 None:intergenic
GTCACGTGCTGTGAGGTTTG+AGG 0.515710 5_3:+56817788 None:intergenic
TGGTAAGCCTTTACTAAGAC+TGG 0.517145 5_3:+56817207 None:intergenic
CTGCTCTTGCAGGAGCTGTA+GGG 0.519097 5_3:-56816891 Msa0819890:CDS
CAGGGTGCCAGTCTTAGTAA+AGG 0.519655 5_3:-56817214 Msa0819890:CDS
CTCGTACCGTCACAAATGTT+GGG 0.521038 5_3:-56815266 Msa0819890:CDS
TAGACATATATTGTATACTT+GGG 0.521854 5_3:-56819694 Msa0819890:CDS
TGTTGAAACAGGCGTTTGGC+CGG 0.521908 5_3:-56818929 Msa0819890:intron
TGTTGGTCAAAGACAGATGT+AGG 0.522566 5_3:-56817633 Msa0819890:CDS
AACGGTAACGGCACAGCGAA+AGG 0.522680 5_3:-56817693 Msa0819890:CDS
TTTGATCAAGCTATATATGA+TGG 0.524554 5_3:-56817579 Msa0819890:CDS
ATAGCAGCTGGGCTCCAACT+AGG 0.530211 5_3:+56815794 None:intergenic
TTGTTGTTGAAACAGGCGTT+TGG 0.530752 5_3:-56818933 Msa0819890:intron
ACTCCAGGAGCAGTTATGTC+AGG 0.531162 5_3:+56815962 None:intergenic
CAGTAATTGAAGGATAATTG+AGG 0.532746 5_3:+56815322 None:intergenic
TAGGATGCTACACGTGCTCT+AGG 0.537953 5_3:+56817663 None:intergenic
GTGATTTCAACTTCTTTGGG+TGG 0.540742 5_3:-56817549 Msa0819890:CDS
GTATCTGATGGTAGATTCGA+TGG 0.541870 5_3:+56815905 None:intergenic
CCTGGATCCATTGCAAGGTT+AGG 0.548244 5_3:+56815471 None:intergenic
GCACGTGACTTTATTGGCCA+TGG 0.550564 5_3:-56817774 Msa0819890:CDS
ACACACTGATGCCCTTAGAA+AGG 0.552985 5_3:-56819831 Msa0819890:intron
TACTTGCTTCAATCTTAGGA+AGG 0.554717 5_3:-56819603 Msa0819890:intron
AATATAAATTGCACACTACA+AGG 0.554754 5_3:-56819277 Msa0819890:CDS
AATTGCACACTACAAGGTCA+TGG 0.556893 5_3:-56819271 Msa0819890:CDS
TGCAGCTAGTACAATTGATA+GGG 0.556954 5_3:-56817373 Msa0819890:CDS
TTGATAATGTGTGTGTGCCA+TGG 0.557883 5_3:+56817757 None:intergenic
AACCTTTCAGATAATTCTAG+AGG 0.558240 5_3:-56815145 Msa0819890:CDS
ATTAATGGTTGCACTGCACT+AGG 0.559723 5_3:+56816486 None:intergenic
TAAGATACCGGTAGTCATGA+TGG 0.560336 5_3:+56815763 None:intergenic
GCAGCCAATATGTTCACTCC+AGG 0.562565 5_3:+56815947 None:intergenic
TGCACTGCTTGAAGATGAAG+AGG 0.564011 5_3:-56819444 Msa0819890:CDS
GAGCGTGAGTGGTTTGGAAA+AGG 0.564165 5_3:-56816766 Msa0819890:CDS
GTCTCCTAGCACATATGTTG+TGG 0.564438 5_3:-56815244 Msa0819890:CDS
AGCCATCTCCAATTATGGCT+GGG 0.565576 5_3:-56816524 Msa0819890:CDS
GCTGAACCTCATCCTTTACC+TGG 0.567641 5_3:-56816826 Msa0819890:CDS
GCACATGCTTACCTTTCTAA+GGG 0.568241 5_3:+56819820 None:intergenic
ATTTCCACAACATATGTGCT+AGG 0.568399 5_3:+56815240 None:intergenic
TGCCTCTAGAATTATCTGAA+AGG 0.572152 5_3:+56815143 None:intergenic
CACACATTATCAACAGCAGC+AGG 0.573163 5_3:-56817747 Msa0819890:CDS
AAATCTGCCATCATGACTAC+CGG 0.576826 5_3:-56815770 Msa0819890:intron
CTTGCACCAGGTAAAGGATG+AGG 0.586113 5_3:+56816820 None:intergenic
AGGATATCGATGAGCGTGAG+TGG 0.586801 5_3:-56816777 Msa0819890:CDS
TTTGTAACACTCCTATGAGC+AGG 0.587801 5_3:+56817420 None:intergenic
AACCCAGCCATAATTGGAGA+TGG 0.588591 5_3:+56816522 None:intergenic
TGGCTAACTCAAGATCATCA+AGG 0.591215 5_3:+56819644 None:intergenic
TGATGGTAGATTCGATGGAC+TGG 0.597441 5_3:+56815910 None:intergenic
TATTCAGCCTAACCTTGCAA+TGG 0.600414 5_3:-56815478 Msa0819890:CDS
ATTGCACACTACAAGGTCAT+GGG 0.603683 5_3:-56819270 Msa0819890:CDS
AAGTGCCATCAAAATGGCGT+GGG 0.606220 5_3:-56818873 Msa0819890:CDS
TGTAACAATGTATTGAACAA+TGG 0.606755 5_3:-56814876 Msa0819890:three_prime_UTR
GGAATGCGGCGTGTATCTGA+TGG 0.608485 5_3:+56815893 None:intergenic
TAGCATCCTACAAAGTATGT+TGG 0.610569 5_3:-56817650 Msa0819890:CDS
TGGTAGATTCGATGGACTGG+TGG 0.611336 5_3:+56815913 None:intergenic
CAAGTGCCATCAAAATGGCG+TGG 0.613735 5_3:-56818874 Msa0819890:CDS
CAAGTCCTGGATCCATTGCA+AGG 0.614140 5_3:+56815466 None:intergenic
CCGGAACATGAAAGTTTCAG+TGG 0.614835 5_3:-56818910 Msa0819890:CDS
GGCTAACTCAAGATCATCAA+GGG 0.615881 5_3:+56819645 None:intergenic
TACTTGGGAGGACATTCTCA+TGG 0.617129 5_3:-56819679 Msa0819890:CDS
GCAATAGGTATGCCTCCTCA+TGG 0.618674 5_3:-56815123 Msa0819890:CDS
TATGGATGCCAATGAGGACG+AGG 0.620439 5_3:-56816797 Msa0819890:CDS
TAATAGCCATGAGAAGGCAA+AGG 0.623516 5_3:-56819510 Msa0819890:intron
TCAATTACTGTGTATAATCG+AGG 0.623863 5_3:-56815309 Msa0819890:CDS
AACTCAAGATCATCAAGGGA+GGG 0.624343 5_3:+56819649 None:intergenic
AGTGCAACCATTAATACTCA+AGG 0.632720 5_3:-56816478 Msa0819890:intron
GAAACAACGTCTATTGCTCA+AGG 0.634413 5_3:-56816922 Msa0819890:CDS
TTGGCATCCATACTTGCACC+AGG 0.635574 5_3:+56816808 None:intergenic
CGTGAGTGGTTTGGAAAAGG+TGG 0.638528 5_3:-56816763 Msa0819890:CDS
ACATATATTGTATACTTGGG+AGG 0.638598 5_3:-56819691 Msa0819890:CDS
GTGTTACAAATGTTGCACCT+TGG 0.643796 5_3:-56817407 Msa0819890:CDS
ATTCCTTACAATCTGCAACA+AGG 0.647427 5_3:-56815875 Msa0819890:CDS
GTTGCAGATTGTAAGGAATG+CGG 0.656336 5_3:+56815879 None:intergenic
TGGCAGATTTGATAGCAGCT+GGG 0.656811 5_3:+56815783 None:intergenic
GATGTAACAATATTCGGCAA+CGG 0.657589 5_3:-56817711 Msa0819890:CDS
GTACTGATGAAAACATTACC+AGG 0.658399 5_3:-56816741 Msa0819890:intron
TAACTCAAGATCATCAAGGG+AGG 0.663086 5_3:+56819648 None:intergenic
AGGAGACCCAACATTTGTGA+CGG 0.664789 5_3:+56815260 None:intergenic
TGCAAGTATGGATGCCAATG+AGG 0.667123 5_3:-56816803 Msa0819890:CDS
CAATAAAGTCACGTGCTGTG+AGG 0.667759 5_3:+56817781 None:intergenic
GGTAACGGCACAGCGAAAGG+TGG 0.679426 5_3:-56817690 Msa0819890:CDS
AATACTGGAAAACCATGAGG+AGG 0.686042 5_3:+56815111 None:intergenic
TGTAAGCTCATAAATCTCTG+AGG 0.690050 5_3:-56815032 Msa0819890:exon
CCAGCAATGCCAGCAACATG+AGG 0.694690 5_3:+56815836 None:intergenic
CTATAGGACTAGTTACTCTG+TGG 0.701819 5_3:+56815061 None:intergenic
CCAAATACTGGAAAACCATG+AGG 0.707398 5_3:+56815108 None:intergenic
GCTGCAACAGTGAAAGACCA+AGG 0.714415 5_3:+56817390 None:intergenic
TGGTCAAAGACAGATGTAGG+TGG 0.722019 5_3:-56817630 Msa0819890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAGCAAAATT+TGG + chr5_3:56815010-56815029 None:intergenic 10.0%
!!! TATACGTTTATAATTAATTT+TGG + chr5_3:56815783-56815802 None:intergenic 10.0%
!!! TTTACATAAACTTATTTTAT+TGG - chr5_3:56817508-56817527 Msa0819890:CDS 10.0%
!!! AAAAAATTAGTATTTGTTAT+TGG - chr5_3:56817680-56817699 Msa0819890:CDS 10.0%
!!! AAACATGTTTTAATTAGAAA+AGG + chr5_3:56816052-56816071 None:intergenic 15.0%
!! TTTCATTAAATAATGAGAAA+GGG + chr5_3:56816094-56816113 None:intergenic 15.0%
!!! TTTTCATTAAATAATGAGAA+AGG + chr5_3:56816095-56816114 None:intergenic 15.0%
!! ACAAATTATAGAAAACTAAT+TGG - chr5_3:56816893-56816912 Msa0819890:CDS 15.0%
!!! ATTTGATATATTTTCTTTGA+TGG + chr5_3:56817579-56817598 None:intergenic 15.0%
!!! ATTTTTTTTATGCAAGTTTA+GGG + chr5_3:56817667-56817686 None:intergenic 15.0%
!!! AATTTTTTTTATGCAAGTTT+AGG + chr5_3:56817668-56817687 None:intergenic 15.0%
!! GTTTATTTATATTATAATGC+AGG - chr5_3:56818161-56818180 Msa0819890:intron 15.0%
!!! CTAAATTTTGTTTTTGATTT+AGG + chr5_3:56819078-56819097 None:intergenic 15.0%
!! TAGACATATATTGTATACTT+GGG - chr5_3:56815060-56815079 Msa0819890:CDS 20.0%
!! TAAATCATAATGTGAATTTG+TGG + chr5_3:56815133-56815152 None:intergenic 20.0%
!! TCTTACAATAAGCATATAAA+TGG - chr5_3:56815281-56815300 Msa0819890:CDS 20.0%
!! ACATTATTTATCATACTCTA+TGG - chr5_3:56815748-56815767 Msa0819890:intron 20.0%
!! ATTTATGAAGATAAGAAGTT+GGG + chr5_3:56816018-56816037 None:intergenic 20.0%
!! TATTTATGAAGATAAGAAGT+TGG + chr5_3:56816019-56816038 None:intergenic 20.0%
!!! TGAAATAAAGTACTGATATT+TGG + chr5_3:56816127-56816146 None:intergenic 20.0%
!!! ATATCTTTTTTAAGTGTGTT+TGG - chr5_3:56816382-56816401 Msa0819890:intron 20.0%
!! AAGTTATTGATAAACATCTA+CGG - chr5_3:56816756-56816775 Msa0819890:CDS 20.0%
!! TAAACAAAGACAATGAATAT+AGG - chr5_3:56816809-56816828 Msa0819890:CDS 20.0%
!!! TATAATTTGTCACATAACAT+AGG + chr5_3:56816883-56816902 None:intergenic 20.0%
!!! TTTTGTTACCAATAGAAATA+TGG + chr5_3:56817417-56817436 None:intergenic 20.0%
!! TGGTAACAAAAATTACATAA+AGG - chr5_3:56817426-56817445 Msa0819890:CDS 20.0%
!!! TAAAGGTATGAATAGTAATA+AGG - chr5_3:56817443-56817462 Msa0819890:CDS 20.0%
!! TATATTATAATGCAGGAAAA+TGG - chr5_3:56818168-56818187 Msa0819890:intron 20.0%
!! ATACTATATTACTACTTATG+TGG + chr5_3:56818416-56818435 None:intergenic 20.0%
!!! ATTAATCATCTTTGGTATTT+TGG - chr5_3:56818624-56818643 Msa0819890:intron 20.0%
!!! TTGTTTTTGATTTAGGTAAA+AGG + chr5_3:56819071-56819090 None:intergenic 20.0%
!!! AGTTTGTGTTTTTTTACTAA+TGG - chr5_3:56819816-56819835 Msa0819890:intron 20.0%
!! GATAGAAAAAGTTTGGTAAT+AGG + chr5_3:56814873-56814892 None:intergenic 25.0%
! GAATGATGATAGAAAAAGTT+TGG + chr5_3:56814880-56814899 None:intergenic 25.0%
! TGTATGAATGAGTATAAGAA+GGG + chr5_3:56814965-56814984 None:intergenic 25.0%
! TTTGGATATTAAGACTATAG+AGG + chr5_3:56814992-56815011 None:intergenic 25.0%
! GTAGACATATATTGTATACT+TGG - chr5_3:56815059-56815078 Msa0819890:CDS 25.0%
! AATATAAATTGCACACTACA+AGG - chr5_3:56815477-56815496 Msa0819890:CDS 25.0%
! ATCATTGCTAATTTAGATTC+AGG - chr5_3:56815584-56815603 Msa0819890:intron 25.0%
! AGATGTTAAATAGAAGAACT+TGG - chr5_3:56815661-56815680 Msa0819890:intron 25.0%
! TTGCAAAATGTTGTATTTGA+AGG + chr5_3:56815940-56815959 None:intergenic 25.0%
! TTAGAGTAAGAAATAAATGC+TGG + chr5_3:56815990-56816009 None:intergenic 25.0%
! TTTATGAAGATAAGAAGTTG+GGG + chr5_3:56816017-56816036 None:intergenic 25.0%
! AATTTATTCCATGACTAAGA+AGG + chr5_3:56816157-56816176 None:intergenic 25.0%
!!! AGCATTGATATTGTATAGTT+GGG + chr5_3:56816273-56816292 None:intergenic 25.0%
!! TTTTCAGCTTAAACACAAAT+TGG + chr5_3:56816549-56816568 None:intergenic 25.0%
! AATTTGTGTTTAAGCTGAAA+AGG - chr5_3:56816548-56816567 Msa0819890:CDS 25.0%
! TTTGATCAAGCTATATATGA+TGG - chr5_3:56817175-56817194 Msa0819890:CDS 25.0%
!! TTTGTTAGCCATATTTCTAT+TGG - chr5_3:56817406-56817425 Msa0819890:CDS 25.0%
!! ATTTTATTGGATCGTATTTC+AGG - chr5_3:56817521-56817540 Msa0819890:CDS 25.0%
!! TTTTATTGGATCGTATTTCA+GGG - chr5_3:56817522-56817541 Msa0819890:CDS 25.0%
! TAATATCTTTCCCTTTACTT+TGG + chr5_3:56817794-56817813 None:intergenic 25.0%
! TTGTATACCTTGAGTATTAA+TGG + chr5_3:56818286-56818305 None:intergenic 25.0%
! ATCAGTTCGATAAAAAAACA+AGG - chr5_3:56818473-56818492 Msa0819890:intron 25.0%
!!! GAAATATAAGTTGAGTTTTG+AGG + chr5_3:56818515-56818534 None:intergenic 25.0%
! TGAATGTAGGATTGAAAAAT+AGG + chr5_3:56818716-56818735 None:intergenic 25.0%
!!! ATATTGATTTGCTAAGATAC+CGG + chr5_3:56819006-56819025 None:intergenic 25.0%
!! TTGAACTTCATTTGTGTTTT+TGG - chr5_3:56819337-56819356 Msa0819890:intron 25.0%
!! TTTTCAATGTTGTAAAACTC+AGG + chr5_3:56819412-56819431 None:intergenic 25.0%
! TCAACAACTTGAAGAATTTA+AGG - chr5_3:56819537-56819556 Msa0819890:intron 25.0%
! TCATTGACATTTAAGGAAAT+TGG - chr5_3:56819577-56819596 Msa0819890:intron 25.0%
! TAATTGTGCTTATGGTTATT+TGG - chr5_3:56819783-56819802 Msa0819890:intron 25.0%
! TGTAACAATGTATTGAACAA+TGG - chr5_3:56819878-56819897 Msa0819890:CDS 25.0%
CTGTATGAATGAGTATAAGA+AGG + chr5_3:56814966-56814985 None:intergenic 30.0%
ACATATATTGTATACTTGGG+AGG - chr5_3:56815063-56815082 Msa0819890:CDS 30.0%
GATTTACTTGCTTCAATCTT+AGG - chr5_3:56815147-56815166 Msa0819890:CDS 30.0%
! TTTTTGTAATAGCCATGAGA+AGG - chr5_3:56815238-56815257 Msa0819890:CDS 30.0%
CAACAATTACTTCTTTACCA+TGG - chr5_3:56815353-56815372 Msa0819890:CDS 30.0%
AAAATGACTCAACAAATCCA+TGG + chr5_3:56815373-56815392 None:intergenic 30.0%
TGTGCAACATATCATTGAAT+TGG + chr5_3:56815713-56815732 None:intergenic 30.0%
! CAAATACAACATTTTGCAAC+AGG - chr5_3:56815941-56815960 Msa0819890:CDS 30.0%
ACTATATTCCTTCTTAGTCA+TGG - chr5_3:56816146-56816165 Msa0819890:intron 30.0%
TTGATTCTCATACTTCAACT+TGG - chr5_3:56816238-56816257 Msa0819890:intron 30.0%
TGATTCTCATACTTCAACTT+GGG - chr5_3:56816239-56816258 Msa0819890:intron 30.0%
!! GAGCATTGATATTGTATAGT+TGG + chr5_3:56816274-56816293 None:intergenic 30.0%
!! AGACTCATCTCTTGTTATTT+CGG + chr5_3:56816325-56816344 None:intergenic 30.0%
ATTAACACTAAGTGCATGTT+TGG + chr5_3:56816503-56816522 None:intergenic 30.0%
GTGTTAATTAAGACTCACAT+TGG - chr5_3:56816515-56816534 Msa0819890:CDS 30.0%
AAGCTGAAAAGGTTTAACAA+CGG - chr5_3:56816559-56816578 Msa0819890:CDS 30.0%
ACATAACATAGGAATGTGTT+AGG + chr5_3:56816872-56816891 None:intergenic 30.0%
! CATATTGTGATTCGTAGTTT+TGG + chr5_3:56816934-56816953 None:intergenic 30.0%
CAAAACTACGAATCACAATA+TGG - chr5_3:56816932-56816951 Msa0819890:CDS 30.0%
TCACCTGATGTAACAATATT+CGG - chr5_3:56817037-56817056 Msa0819890:intron 30.0%
TGATGTGATTTCAACTTCTT+TGG - chr5_3:56817201-56817220 Msa0819890:CDS 30.0%
GATGTGATTTCAACTTCTTT+GGG - chr5_3:56817202-56817221 Msa0819890:CDS 30.0%
GTGAACAAAGCTTCAATATA+TGG + chr5_3:56817238-56817257 None:intergenic 30.0%
TTCACTGATGGAATTTCAAT+TGG - chr5_3:56817253-56817272 Msa0819890:intron 30.0%
TCACTGATGGAATTTCAATT+GGG - chr5_3:56817254-56817273 Msa0819890:intron 30.0%
GTTTAAAGACTATGCACTAA+CGG - chr5_3:56818049-56818068 Msa0819890:intron 30.0%
! TCTGAAGCAAAAACATATAC+AGG - chr5_3:56818202-56818221 Msa0819890:intron 30.0%
ATTAAAGCCATCTCCAATTA+TGG - chr5_3:56818225-56818244 Msa0819890:intron 30.0%
!! AAAATTTCTAGTTGCGTCTA+CGG - chr5_3:56818331-56818350 Msa0819890:intron 30.0%
ATATTACTACTTATGTGGAG+CGG + chr5_3:56818411-56818430 None:intergenic 30.0%
!!! TTTTTTCAAATCAACACCGA+CGG - chr5_3:56818547-56818566 Msa0819890:intron 30.0%
! AGGAACCTAAACTTTTATTG+CGG - chr5_3:56818597-56818616 Msa0819890:intron 30.0%
ATGTAGGATTGAAAAATAGG+TGG + chr5_3:56818713-56818732 None:intergenic 30.0%
ACAAAATAAGTGAAGAAGAG+TGG + chr5_3:56818743-56818762 None:intergenic 30.0%
!! TCAAAGATCACTCACTTTTA+AGG - chr5_3:56819150-56819169 Msa0819890:intron 30.0%
!! CAAAGATCACTCACTTTTAA+GGG - chr5_3:56819151-56819170 Msa0819890:intron 30.0%
CAGTAATTGAAGGATAATTG+AGG + chr5_3:56819435-56819454 None:intergenic 30.0%
CGATTATACACAGTAATTGA+AGG + chr5_3:56819445-56819464 None:intergenic 30.0%
TCAATTACTGTGTATAATCG+AGG - chr5_3:56819445-56819464 Msa0819890:CDS 30.0%
ACCAAGTTCATTGACATTTA+AGG - chr5_3:56819570-56819589 Msa0819890:intron 30.0%
TCCTTAAATGTCAATGAACT+TGG + chr5_3:56819574-56819593 None:intergenic 30.0%
AACCTTTCAGATAATTCTAG+AGG - chr5_3:56819609-56819628 Msa0819890:CDS 30.0%
TATGTGTGTAATTGTGCTTA+TGG - chr5_3:56819775-56819794 Msa0819890:intron 30.0%
TACTTGCTTCAATCTTAGGA+AGG - chr5_3:56815151-56815170 Msa0819890:CDS 35.0%
! TTTCTTGGACTGGAAAAAGA+TGG - chr5_3:56815509-56815528 Msa0819890:CDS 35.0%
GAATTTCTCTTGATTCTGCT+TGG - chr5_3:56815534-56815553 Msa0819890:CDS 35.0%
!! GACATGTTTGTTGTTGAAAC+AGG - chr5_3:56815814-56815833 Msa0819890:CDS 35.0%
GATTCTCATACTTCAACTTG+GGG - chr5_3:56816240-56816259 Msa0819890:intron 35.0%
AATGCTCTACCAAATACACA+AGG - chr5_3:56816287-56816306 Msa0819890:intron 35.0%
AACTAAGGTCCTTGTGTATT+TGG + chr5_3:56816299-56816318 None:intergenic 35.0%
!! TTGTTATTTCGGGACAACTA+AGG + chr5_3:56816314-56816333 None:intergenic 35.0%
!! GACTCATCTCTTGTTATTTC+GGG + chr5_3:56816324-56816343 None:intergenic 35.0%
ACGGAGAGACATAAAATGTA+AGG - chr5_3:56816578-56816597 Msa0819890:intron 35.0%
TTGCCGAATATTGTTACATC+AGG + chr5_3:56817043-56817062 None:intergenic 35.0%
GATGTAACAATATTCGGCAA+CGG - chr5_3:56817043-56817062 Msa0819890:intron 35.0%
TAGCATCCTACAAAGTATGT+TGG - chr5_3:56817104-56817123 Msa0819890:intron 35.0%
CTTTGACCAACATACTTTGT+AGG + chr5_3:56817113-56817132 None:intergenic 35.0%
!! ATTGAAGCTTTGTTCACTGA+TGG - chr5_3:56817241-56817260 Msa0819890:intron 35.0%
TTGCAGCTAGTACAATTGAT+AGG - chr5_3:56817380-56817399 Msa0819890:CDS 35.0%
TGCAGCTAGTACAATTGATA+GGG - chr5_3:56817381-56817400 Msa0819890:CDS 35.0%
!! ATTTTCTTTGATGGACCTGA+TGG + chr5_3:56817570-56817589 None:intergenic 35.0%
TACTTACGCATCTTGAATTG+TGG + chr5_3:56817634-56817653 None:intergenic 35.0%
ACTTGATCCTACCAAAGTAA+AGG - chr5_3:56817780-56817799 Msa0819890:CDS 35.0%
CTTGATCCTACCAAAGTAAA+GGG - chr5_3:56817781-56817800 Msa0819890:CDS 35.0%
ATCTTTCCCTTTACTTTGGT+AGG + chr5_3:56817790-56817809 None:intergenic 35.0%
GTGATCAATGATGAGAAAAG+TGG - chr5_3:56817892-56817911 Msa0819890:intron 35.0%
! GTACTGATGAAAACATTACC+AGG - chr5_3:56818013-56818032 Msa0819890:intron 35.0%
TAAACTCGTATGAGTTTACC+TGG + chr5_3:56818034-56818053 None:intergenic 35.0%
TAGCGAAATCTGATTGAAGA+TGG + chr5_3:56818092-56818111 None:intergenic 35.0%
AGTGCAACCATTAATACTCA+AGG - chr5_3:56818276-56818295 Msa0819890:intron 35.0%
TGTTGCCGCAATAAAAGTTT+AGG + chr5_3:56818605-56818624 None:intergenic 35.0%
ATTCCTTACAATCTGCAACA+AGG - chr5_3:56818879-56818898 Msa0819890:CDS 35.0%
! GACTTTTCTACATATACTGC+AGG + chr5_3:56819132-56819151 None:intergenic 35.0%
ATAGCGACTCCATTTGAATA+TGG - chr5_3:56819244-56819263 Msa0819890:CDS 35.0%
ACTCCATTTGAATATGGTTC+TGG - chr5_3:56819250-56819269 Msa0819890:CDS 35.0%
TGTCCAGAACCATATTCAAA+TGG + chr5_3:56819256-56819275 None:intergenic 35.0%
CTTAGATCATAAACAAGTCC+TGG + chr5_3:56819304-56819323 None:intergenic 35.0%
CGAGTAACGTTTATAAGGTT+CGG + chr5_3:56819472-56819491 None:intergenic 35.0%
ATTTCCACAACATATGTGCT+AGG + chr5_3:56819517-56819536 None:intergenic 35.0%
!! TGCCTCTAGAATTATCTGAA+AGG + chr5_3:56819614-56819633 None:intergenic 35.0%
! CAGATAATTCTAGAGGCAAT+AGG - chr5_3:56819616-56819635 Msa0819890:CDS 35.0%
! CTCATGGTTTTCCAGTATTT+GGG - chr5_3:56819647-56819666 Msa0819890:CDS 35.0%
CAAGTCAATTTCCCAAATAC+TGG + chr5_3:56819661-56819680 None:intergenic 35.0%
CAGTATTTGGGAAATTGACT+TGG - chr5_3:56819659-56819678 Msa0819890:CDS 35.0%
TGAGCTTACAAGACTACTAT+AGG + chr5_3:56819712-56819731 None:intergenic 35.0%
TGTAAGCTCATAAATCTCTG+AGG - chr5_3:56819722-56819741 Msa0819890:intron 35.0%
TGTATTGAACAATGTTCTGC+TGG - chr5_3:56819848-56819867 Msa0819890:CDS 35.0%
GCACATGCTTACCTTTCTAA+GGG + chr5_3:56814937-56814956 None:intergenic 40.0%
AGCACATGCTTACCTTTCTA+AGG + chr5_3:56814938-56814957 None:intergenic 40.0%
AACTCAAGATCATCAAGGGA+GGG + chr5_3:56815108-56815127 None:intergenic 40.0%
TAACTCAAGATCATCAAGGG+AGG + chr5_3:56815109-56815128 None:intergenic 40.0%
GGCTAACTCAAGATCATCAA+GGG + chr5_3:56815112-56815131 None:intergenic 40.0%
TGGCTAACTCAAGATCATCA+AGG + chr5_3:56815113-56815132 None:intergenic 40.0%
TAATAGCCATGAGAAGGCAA+AGG - chr5_3:56815244-56815263 Msa0819890:CDS 40.0%
AATTGCACACTACAAGGTCA+TGG - chr5_3:56815483-56815502 Msa0819890:CDS 40.0%
ATTGCACACTACAAGGTCAT+GGG - chr5_3:56815484-56815503 Msa0819890:CDS 40.0%
TTTCTCTTGATTCTGCTTGG+TGG - chr5_3:56815537-56815556 Msa0819890:CDS 40.0%
! TTGTTGTTGAAACAGGCGTT+TGG - chr5_3:56815821-56815840 Msa0819890:CDS 40.0%
CCACTGAAACTTTCATGTTC+CGG + chr5_3:56815847-56815866 None:intergenic 40.0%
CATGAAAGTTTCAGTGGCAT+TGG - chr5_3:56815850-56815869 Msa0819890:CDS 40.0%
! AGTTTCAGTGGCATTGGATA+TGG - chr5_3:56815856-56815875 Msa0819890:CDS 40.0%
ATGGTCAAGTGCCATCAAAA+TGG - chr5_3:56815875-56815894 Msa0819890:CDS 40.0%
!! AACATCTACGGTGTTGTGTA+TGG - chr5_3:56816768-56816787 Msa0819890:CDS 40.0%
!! TTGATAATGTGTGTGTGCCA+TGG + chr5_3:56817000-56817019 None:intergenic 40.0%
ACAATATTCGGCAACGGTAA+CGG - chr5_3:56817049-56817068 Msa0819890:intron 40.0%
TGTTGGTCAAAGACAGATGT+AGG - chr5_3:56817121-56817140 Msa0819890:intron 40.0%
GTGATTTCAACTTCTTTGGG+TGG - chr5_3:56817205-56817224 Msa0819890:CDS 40.0%
TTGTCGTTGTTTGTTCTGCT+GGG - chr5_3:56817302-56817321 Msa0819890:intron 40.0%
TTTGTAACACTCCTATGAGC+AGG + chr5_3:56817337-56817356 None:intergenic 40.0%
GTGTTACAAATGTTGCACCT+TGG - chr5_3:56817347-56817366 Msa0819890:CDS 40.0%
TGGTAAGCCTTTACTAAGAC+TGG + chr5_3:56817550-56817569 None:intergenic 40.0%
CTTAGTAAAGGCTTACCATC+AGG - chr5_3:56817552-56817571 Msa0819890:CDS 40.0%
TTGGTAGGATCAAGTGTTCT+AGG + chr5_3:56817775-56817794 None:intergenic 40.0%
GAAACAACGTCTATTGCTCA+AGG - chr5_3:56817832-56817851 Msa0819890:CDS 40.0%
GATGAAAACCCAGCCATAAT+TGG + chr5_3:56818241-56818260 None:intergenic 40.0%
! TTATGGCTGGGTTTTCATCT+AGG - chr5_3:56818242-56818261 Msa0819890:intron 40.0%
! TATGGCTGGGTTTTCATCTA+GGG - chr5_3:56818243-56818262 Msa0819890:intron 40.0%
ATTAATGGTTGCACTGCACT+AGG + chr5_3:56818271-56818290 None:intergenic 40.0%
AACTGAGATGATGTCCCAAT+CGG - chr5_3:56818449-56818468 Msa0819890:intron 40.0%
! TTATCGAACTGATGCCGATT+GGG + chr5_3:56818466-56818485 None:intergenic 40.0%
TTTATCGAACTGATGCCGAT+TGG + chr5_3:56818467-56818486 None:intergenic 40.0%
GCGGCAACATTAATCATCTT+TGG - chr5_3:56818616-56818635 Msa0819890:intron 40.0%
ACTTCAATTCTCTACCCTAG+TGG - chr5_3:56818687-56818706 Msa0819890:intron 40.0%
TGAAAAATAGGTGGCCACTA+GGG + chr5_3:56818704-56818723 None:intergenic 40.0%
TTGAAAAATAGGTGGCCACT+AGG + chr5_3:56818705-56818724 None:intergenic 40.0%
GAAGAGTGGACATTGAATGT+AGG + chr5_3:56818729-56818748 None:intergenic 40.0%
GTATCTGATGGTAGATTCGA+TGG + chr5_3:56818852-56818871 None:intergenic 40.0%
GTTGCAGATTGTAAGGAATG+CGG + chr5_3:56818878-56818897 None:intergenic 40.0%
GTTCCTTGTTGCAGATTGTA+AGG + chr5_3:56818885-56818904 None:intergenic 40.0%
TCAAGACACTTCATCCTAGT+TGG - chr5_3:56818946-56818965 Msa0819890:intron 40.0%
AAATCTGCCATCATGACTAC+CGG - chr5_3:56818984-56819003 Msa0819890:intron 40.0%
TAAGATACCGGTAGTCATGA+TGG + chr5_3:56818994-56819013 None:intergenic 40.0%
TATTCAGCCTAACCTTGCAA+TGG - chr5_3:56819276-56819295 Msa0819890:CDS 40.0%
CGGTACGAGTAACGTTTATA+AGG + chr5_3:56819477-56819496 None:intergenic 40.0%
AATACTGGAAAACCATGAGG+AGG + chr5_3:56819646-56819665 None:intergenic 40.0%
CCAAATACTGGAAAACCATG+AGG + chr5_3:56819649-56819668 None:intergenic 40.0%
! CCTCATGGTTTTCCAGTATT+TGG - chr5_3:56819646-56819665 Msa0819890:CDS 40.0%
!! GGGAAATTGACTTGGACAAA+TGG - chr5_3:56819667-56819686 Msa0819890:CDS 40.0%
!! CTATAGGACTAGTTACTCTG+TGG + chr5_3:56819696-56819715 None:intergenic 40.0%
ACACACTGATGCCCTTAGAA+AGG - chr5_3:56814923-56814942 Msa0819890:three_prime_UTR 45.0%
TACTTGGGAGGACATTCTCA+TGG - chr5_3:56815075-56815094 Msa0819890:CDS 45.0%
AGATCATCAAGGGAGGGATT+TGG + chr5_3:56815102-56815121 None:intergenic 45.0%
CTGTTTCCTTTGCCTTCTCA+TGG + chr5_3:56815253-56815272 None:intergenic 45.0%
TGCACTGCTTGAAGATGAAG+AGG - chr5_3:56815310-56815329 Msa0819890:CDS 45.0%
ACAAGGTCATGGGACTTTCT+TGG - chr5_3:56815494-56815513 Msa0819890:CDS 45.0%
! CTTGGACTGGAAAAAGATGG+TGG - chr5_3:56815512-56815531 Msa0819890:CDS 45.0%
! TCTTGATTCTGCTTGGTGGA+AGG - chr5_3:56815541-56815560 Msa0819890:CDS 45.0%
CCGGAACATGAAAGTTTCAG+TGG - chr5_3:56815844-56815863 Msa0819890:CDS 45.0%
AAGTGCCATCAAAATGGCGT+GGG - chr5_3:56815881-56815900 Msa0819890:CDS 45.0%
CATCAAAATGGCGTGGGAAT+GGG - chr5_3:56815887-56815906 Msa0819890:CDS 45.0%
ATCAAAATGGCGTGGGAATG+GGG - chr5_3:56815888-56815907 Msa0819890:CDS 45.0%
CAATAAAGTCACGTGCTGTG+AGG + chr5_3:56816976-56816995 None:intergenic 45.0%
CTCACAGCACGTGACTTTAT+TGG - chr5_3:56816974-56816993 Msa0819890:CDS 45.0%
CACACATTATCAACAGCAGC+AGG - chr5_3:56817007-56817026 Msa0819890:intron 45.0%
TGGTCAAAGACAGATGTAGG+TGG - chr5_3:56817124-56817143 Msa0819890:intron 45.0%
GTTGTCGTTGTTTGTTCTGC+TGG - chr5_3:56817301-56817320 Msa0819890:intron 45.0%
GTTTGTTCTGCTGGGAATGA+TGG - chr5_3:56817310-56817329 Msa0819890:intron 45.0%
TCTAGGCTTGCAAAAACGAC+TGG + chr5_3:56817758-56817777 None:intergenic 45.0%
TCCTTTACCTGGTGCAAGTA+TGG - chr5_3:56817939-56817958 Msa0819890:intron 45.0%
TCCATACTTGCACCAGGTAA+AGG + chr5_3:56817943-56817962 None:intergenic 45.0%
TGCAAGTATGGATGCCAATG+AGG - chr5_3:56817951-56817970 Msa0819890:intron 45.0%
ATCGATATCCTCGTCCTCAT+TGG + chr5_3:56817968-56817987 None:intergenic 45.0%
AAGCCATCTCCAATTATGGC+TGG - chr5_3:56818229-56818248 Msa0819890:intron 45.0%
AGCCATCTCCAATTATGGCT+GGG - chr5_3:56818230-56818249 Msa0819890:intron 45.0%
AACCCAGCCATAATTGGAGA+TGG + chr5_3:56818235-56818254 None:intergenic 45.0%
! ATGGCTGGGTTTTCATCTAG+GGG - chr5_3:56818244-56818263 Msa0819890:intron 45.0%
TAGGTTCCTCCACATCCTTA+GGG + chr5_3:56818586-56818605 None:intergenic 45.0%
TTAGGTTCCTCCACATCCTT+AGG + chr5_3:56818587-56818606 None:intergenic 45.0%
TGCTCCTGGAGTGAACATAT+TGG - chr5_3:56818803-56818822 Msa0819890:intron 45.0%
TGATGGTAGATTCGATGGAC+TGG + chr5_3:56818847-56818866 None:intergenic 45.0%
ATGTCTTGTCCTCATGTTGC+TGG - chr5_3:56818909-56818928 Msa0819890:CDS 45.0%
! TGGCAGATTTGATAGCAGCT+GGG + chr5_3:56818974-56818993 None:intergenic 45.0%
! ATGGCAGATTTGATAGCAGC+TGG + chr5_3:56818975-56818994 None:intergenic 45.0%
TTATCGAACGCGTCTCTGAT+TGG + chr5_3:56819223-56819242 None:intergenic 45.0%
ACTCGTACCGTCACAAATGT+TGG - chr5_3:56819487-56819506 Msa0819890:CDS 45.0%
CTCGTACCGTCACAAATGTT+GGG - chr5_3:56819488-56819507 Msa0819890:CDS 45.0%
AGGAGACCCAACATTTGTGA+CGG + chr5_3:56819497-56819516 None:intergenic 45.0%
GTCTCCTAGCACATATGTTG+TGG - chr5_3:56819510-56819529 Msa0819890:intron 45.0%
GTCATGGGACTTTCTTGGAC+TGG - chr5_3:56815499-56815518 Msa0819890:CDS 50.0%
! GCTTGGTGGAAGGCAAGATT+TGG - chr5_3:56815551-56815570 Msa0819890:CDS 50.0%
TGTTGAAACAGGCGTTTGGC+CGG - chr5_3:56815825-56815844 Msa0819890:CDS 50.0%
CAAGTGCCATCAAAATGGCG+TGG - chr5_3:56815880-56815899 Msa0819890:CDS 50.0%
!! CCATTCCCACGCCATTTTGA+TGG + chr5_3:56815889-56815908 None:intergenic 50.0%
CCATCAAAATGGCGTGGGAA+TGG - chr5_3:56815886-56815905 Msa0819890:CDS 50.0%
TCACGTGCTGTGAGGTTTGA+GGG + chr5_3:56816968-56816987 None:intergenic 50.0%
GCACGTGACTTTATTGGCCA+TGG - chr5_3:56816980-56816999 Msa0819890:CDS 50.0%
TAGGATGCTACACGTGCTCT+AGG + chr5_3:56817094-56817113 None:intergenic 50.0%
!! GGAATGATGGACCTGCTCAT+AGG - chr5_3:56817323-56817342 Msa0819890:intron 50.0%
GCTGCAACAGTGAAAGACCA+AGG + chr5_3:56817367-56817386 None:intergenic 50.0%
! CAGGGTGCCAGTCTTAGTAA+AGG - chr5_3:56817540-56817559 Msa0819890:CDS 50.0%
GCTGAACCTCATCCTTTACC+TGG - chr5_3:56817928-56817947 Msa0819890:intron 50.0%
CTTGCACCAGGTAAAGGATG+AGG + chr5_3:56817937-56817956 None:intergenic 50.0%
TTGGCATCCATACTTGCACC+AGG + chr5_3:56817949-56817968 None:intergenic 50.0%
TATGGATGCCAATGAGGACG+AGG - chr5_3:56817957-56817976 Msa0819890:intron 50.0%
AGGATATCGATGAGCGTGAG+TGG - chr5_3:56817977-56817996 Msa0819890:intron 50.0%
ATCGATGAGCGTGAGTGGTT+TGG - chr5_3:56817982-56818001 Msa0819890:intron 50.0%
! GAGCGTGAGTGGTTTGGAAA+AGG - chr5_3:56817988-56818007 Msa0819890:intron 50.0%
! CGTGAGTGGTTTGGAAAAGG+TGG - chr5_3:56817991-56818010 Msa0819890:intron 50.0%
! TTCTAGTTGCGTCTACGGTG+AGG - chr5_3:56818336-56818355 Msa0819890:intron 50.0%
ACTCCAGGAGCAGTTATGTC+AGG + chr5_3:56818795-56818814 None:intergenic 50.0%
GCAGCCAATATGTTCACTCC+AGG + chr5_3:56818810-56818829 None:intergenic 50.0%
!! TGGTAGATTCGATGGACTGG+TGG + chr5_3:56818844-56818863 None:intergenic 50.0%
CCTGGATCCATTGCAAGGTT+AGG + chr5_3:56819286-56819305 None:intergenic 50.0%
CCTAACCTTGCAATGGATCC+AGG - chr5_3:56819283-56819302 Msa0819890:CDS 50.0%
CAAGTCCTGGATCCATTGCA+AGG + chr5_3:56819291-56819310 None:intergenic 50.0%
GCAATAGGTATGCCTCCTCA+TGG - chr5_3:56819631-56819650 Msa0819890:CDS 50.0%
GTCACGTGCTGTGAGGTTTG+AGG + chr5_3:56816969-56816988 None:intergenic 55.0%
! AACGGTAACGGCACAGCGAA+AGG - chr5_3:56817061-56817080 Msa0819890:intron 55.0%
!! GGCTTTGAAGCTGCTCTTGC+AGG - chr5_3:56817853-56817872 Msa0819890:CDS 55.0%
CTGCTCTTGCAGGAGCTGTA+GGG - chr5_3:56817863-56817882 Msa0819890:intron 55.0%
GGATCACTGTCTCAGCCCTA+AGG - chr5_3:56818568-56818587 Msa0819890:intron 55.0%
CTGTCTCAGCCCTAAGGATG+TGG - chr5_3:56818574-56818593 Msa0819890:intron 55.0%
TCTCAGCCCTAAGGATGTGG+AGG - chr5_3:56818577-56818596 Msa0819890:intron 55.0%
CAGCCTGACATAACTGCTCC+TGG - chr5_3:56818789-56818808 Msa0819890:intron 55.0%
GGAATGCGGCGTGTATCTGA+TGG + chr5_3:56818864-56818883 None:intergenic 55.0%
CCAGCAATGCCAGCAACATG+AGG + chr5_3:56818921-56818940 None:intergenic 55.0%
CCTCATGTTGCTGGCATTGC+TGG - chr5_3:56818918-56818937 Msa0819890:CDS 55.0%
ATAGCAGCTGGGCTCCAACT+AGG + chr5_3:56818963-56818982 None:intergenic 55.0%
! GGTAACGGCACAGCGAAAGG+TGG - chr5_3:56817064-56817083 Msa0819890:intron 60.0%
GCTGCTCTTGCAGGAGCTGT+AGG - chr5_3:56817862-56817881 Msa0819890:intron 60.0%
GGGCTGAGACAGTGATCCGT+CGG + chr5_3:56818566-56818585 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 56814861 56819915 56814861 ID=Msa0819890;Name=Msa0819890
chr5_3 mRNA 56814861 56819915 56814861 ID=Msa0819890-mRNA-1;Parent=Msa0819890;Name=Msa0819890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.8|0.72|1|1|1|11|189|789
chr5_3 exon 56814861 56815582 56814861 ID=Msa0819890-mRNA-1:exon:17174;Parent=Msa0819890-mRNA-1
chr5_3 exon 56815771 56815984 56815771 ID=Msa0819890-mRNA-1:exon:17173;Parent=Msa0819890-mRNA-1
chr5_3 exon 56816479 56816593 56816479 ID=Msa0819890-mRNA-1:exon:17172;Parent=Msa0819890-mRNA-1
chr5_3 exon 56816742 56817017 56816742 ID=Msa0819890-mRNA-1:exon:17171;Parent=Msa0819890-mRNA-1
chr5_3 exon 56817130 56817233 56817130 ID=Msa0819890-mRNA-1:exon:17170;Parent=Msa0819890-mRNA-1
chr5_3 exon 56817329 56817872 56817329 ID=Msa0819890-mRNA-1:exon:17169;Parent=Msa0819890-mRNA-1
chr5_3 exon 56818814 56818940 56818814 ID=Msa0819890-mRNA-1:exon:17168;Parent=Msa0819890-mRNA-1
chr5_3 exon 56819171 56819335 56819171 ID=Msa0819890-mRNA-1:exon:17167;Parent=Msa0819890-mRNA-1
chr5_3 exon 56819429 56819526 56819429 ID=Msa0819890-mRNA-1:exon:17166;Parent=Msa0819890-mRNA-1
chr5_3 exon 56819604 56819713 56819604 ID=Msa0819890-mRNA-1:exon:17165;Parent=Msa0819890-mRNA-1
chr5_3 exon 56819832 56819915 56819832 ID=Msa0819890-mRNA-1:exon:17164;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56819832 56819915 56819832 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56819604 56819713 56819604 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56819429 56819526 56819429 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56819171 56819335 56819171 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56818814 56818940 56818814 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56817329 56817872 56817329 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56817130 56817233 56817130 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56816742 56817017 56816742 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56816479 56816593 56816479 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56815771 56815984 56815771 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 CDS 56815050 56815582 56815050 ID=Msa0819890-mRNA-1:cds;Parent=Msa0819890-mRNA-1
chr5_3 three_prime_UTR 56814861 56815049 56814861 ID=Msa0819890-mRNA-1:three_prime_utr;Parent=Msa0819890-mRNA-1
Gene Sequence

>Msa0819890

ATGTCATATCCTATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGAGTTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAATAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAGATGGTGGAATTTCTCTTGATTCTGCTTGGTGGAAGGCAAGATTTGGTGAAGATTCAATCATTGCTAATTTAGATTCAGGCGTTTGGCCGGAACATGAAAGTTTCAGTGGCATTGGATATGGTCAAGTGCCATCAAAATGGCGTGGGAATGGGGTCTGTGAGATTGATCATTTTATTACACCTTCAAATACAACATTTTGCAACAGAAAACTAATTGGAGCAAGAATATTCAGCCAAAACTACGAATCACAATATGGAAAACTCAATCCCTCAAACCTCACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTCGGCAACGGTAACGGCACAGCGAAAGGTGGTTCTCCTAGAGCACGTGTAGCATCCTACAAAGTATGTTGGTCAAAGACAGATGTAGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAACTTCTTTGGGTGGCTCTAGTCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATGTTGTCGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCATAGGAGTGTTACAAATGTTGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGCCATATTTCTATTGGTAACAAAAATTACATAAAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGTCCATCAAAGAAAATATATCAAATGATTCATTCTATCGATGCTAGACTTCTTAATGCCACAATTCAAGATGCTCGTTTTTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGTACTCGACTTGACGAAACAACGTCTATTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCTGTAGGGATTTTTGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCTGAACCTCATCCTTTACCTGGTGCAAGTATGGATGCCAATGAGGACGAGGATATCGATGAGCGTGAGTGGTTTGGAAAAGGTGGTACTGATGAAAACATTACCAGGAAAATGGTTGCATACATGTCTGAAGCAAAAACATATACAGGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCAGTGCAACCATTAATACTCAAGCCTGACATAACTGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACCAGTCCATCGAATCTACCATCAGATACACGCCGCATTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGCCCAGCTGCTATCAAATCTGCCATCATGACTACCGCTACAACACTAGATAACAACAATCAACCAATCAGAGACGCGTTCGATAAGATAGCGACTCCATTTGAATATGGTTCTGGACATATTCAGCCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAAGCACAAATGATTACTTGAACTTCATTTGTGTTTTTGGTCACAGTCACAATTTATTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAACCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAACGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCATTGACATTTAAGGAAATTGGAGAAAAGAAAACCTTTCAGATAATTCTAGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCACAGAGTAACTAGTCCTATAGTAGTCTTGTAA
Protein sequence

>Msa0819890

MSYPITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWKARFGEDSIIANLDSGVWPEHESFSGIGYGQVPSKWRGNGVCEIDHFITPSNTTFCNRKLIGARIFSQNYESQYGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDVGGCHEADILAAFDQAIYDGVDVISTSLGGSSPYIEALFTDGISIGSFHAFAKNVVVVCSAGNDGPAHRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKPRTLDPTKVKGKILVCTRLDETTSIAQGFEAALAGAVGIFVINDEKSGSLLLAEPHPLPGASMDANEDEDIDEREWFGKGGTDENITRKMVAYMSEAKTYTGLKPSPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRIPYNLQQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNNNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDLSTNDYLNFICVFGHSHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEEFKVHVQPSSLTFKEIGEKKTFQIILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL*